mRNA_D-dichotoma_M_contig991.20545.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig991.20545.1
Unique NamemRNA_D-dichotoma_M_contig991.20545.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 4.770e-67
Identity = 141/335 (42.09%), Postives = 198/335 (59.10%), Query Frame = 1
Query:    1 TPEQRHMIQEEIKKLVANEAIQESISQYVSACHCVPKRDRTVRVVQDYGGLNALLKFQSGGLGDIVTILDEMGESTCFSCLHLASGFLQLKI----RYDT--RRTVG----YVRCGFGLKTIPSALASYVRHTLMPVKSKGVRSWVDDIIHPTKTIEGQHPLLRETLDCL*KRRLSISLPKSEFCEPVVEWLGMMMDGFGIRPASSKIDAIRQLAQPTTVEGVRMLLGMSRYLRQFIPNYS------TDLLRYSRFRGERARKLKVRWGVAQREAMTVLVELLTSPPVLAMPNWGLPFRLHTDGSEIGAGAVLTQFSNSVEKVLAYASHRWSVTD 957
            +PE+R MI+ EI++LV    I++S+S + + C CV K+D T+R+  D+  LN LL   SGGLGD+ TI D +     F+ L LASGF Q++I    RY T  R   G    + R GFGL  +P+A    V+  L  +   GV SW+DDI+  + + E     L   L+ L    LS++  K  F     E+LGM++D  G+ PA SK+DAI ++ +P TVE +R  LG++ YLRQF+PNYS      T++LR   F  +RARKL + W VA+ +A   L E L SP VLA P+   PF LHTD S +G GA L Q  + V + +A+A+HR+  TD
Sbjct:   25 SPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCPFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFANHRFLQTD 357          
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 3.930e-66
Identity = 143/335 (42.69%), Postives = 199/335 (59.40%), Query Frame = 1
Query:    1 TPEQRHMIQEEIKKLVANEAIQESISQYVSACHCVPKRDRTVRVVQDYGGLNALLKFQSGGLGDIVTILDEMGESTCFSCLHLASGFLQLKI----RYDT--RRTVG----YVRCGFGLKTIPSALASYVRHTLMPVKSKGVRSWVDDIIHPTKTIEGQHPLLRETLDCL*KRRLSISLPKSEFCEPVVEWLGMMMDGFGIRPASSKIDAIRQLAQPTTVEGVRMLLGMSRYLRQFIPNYS------TDLLRYSRFRGERARKLKVRWGVAQREAMTVLVELLTSPPVLAMPNWGLPFRLHTDGSEIGAGAVLTQFSNSVEKVLAYASHRWSVTD 957
            +PE+R MI+ EI++LV    I++S+S + + C CV K+D T+R+  D+  LN LL   SGGLGD+ TI D +     F+ L LASGF Q++I    RY T  R   G    + R GFGL  +P+A    V+  L  +   GV SW+DDI+  + + E     L   L+ L    LS++  K  F     E+LGM++D  G+ PA SK+DAI ++ +P TVE +R  LG++ YLRQF+PNYS      T++LR   F  +RARKL + W VA+ +A   L E L SP VLA P+   PF LHTD S +G GA L Q  + V + +A+ASHR+S TD
Sbjct:  165 SPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTD 497          
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 1.920e-64
Identity = 143/335 (42.69%), Postives = 199/335 (59.40%), Query Frame = 1
Query:    1 TPEQRHMIQEEIKKLVANEAIQESISQYVSACHCVPKRDRTVRVVQDYGGLNALLKFQSGGLGDIVTILDEMGESTCFSCLHLASGFLQLKI----RYDT--RRTVG----YVRCGFGLKTIPSALASYVRHTLMPVKSKGVRSWVDDIIHPTKTIEGQHPLLRETLDCL*KRRLSISLPKSEFCEPVVEWLGMMMDGFGIRPASSKIDAIRQLAQPTTVEGVRMLLGMSRYLRQFIPNYS------TDLLRYSRFRGERARKLKVRWGVAQREAMTVLVELLTSPPVLAMPNWGLPFRLHTDGSEIGAGAVLTQFSNSVEKVLAYASHRWSVTD 957
            +PE+R MI+ EI++LV    I++S+S + + C CV K+D T+R+  D+  LN LL   SGGLGD+ TI D +     F+ L LASGF Q++I    RY T  R   G    + R GFGL  +P+A    V+  L  +   GV SW+DDI+  + + E     L   L+ L    LS++  K  F     E+LGM++D  G+ PA SK+DAI ++ +P TVE +R  LG++ YLRQF+PNYS      T++LR   F  +RARKL + W VA+ +A   L E L SP VLA P+   PF LHTD S +G GA L Q  + V + +A+ASHR+S TD
Sbjct:  167 SPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTD 499          
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 5.610e-64
Identity = 143/335 (42.69%), Postives = 199/335 (59.40%), Query Frame = 1
Query:    1 TPEQRHMIQEEIKKLVANEAIQESISQYVSACHCVPKRDRTVRVVQDYGGLNALLKFQSGGLGDIVTILDEMGESTCFSCLHLASGFLQLKI----RYDT--RRTVG----YVRCGFGLKTIPSALASYVRHTLMPVKSKGVRSWVDDIIHPTKTIEGQHPLLRETLDCL*KRRLSISLPKSEFCEPVVEWLGMMMDGFGIRPASSKIDAIRQLAQPTTVEGVRMLLGMSRYLRQFIPNYS------TDLLRYSRFRGERARKLKVRWGVAQREAMTVLVELLTSPPVLAMPNWGLPFRLHTDGSEIGAGAVLTQFSNSVEKVLAYASHRWSVTD 957
            +PE+R MI+ EI++LV    I++S+S + + C CV K+D T+R+  D+  LN LL   SGGLGD+ TI D +     F+ L LASGF Q++I    RY T  R   G    + R GFGL  +P+A    V+  L  +   GV SW+DDI+  + + E     L   L+ L    LS++  K  F     E+LGM++D  G+ PA SK+DAI ++ +P TVE +R  LG++ YLRQF+PNYS      T++LR   F  +RARKL + W VA+ +A   L E L SP VLA P+   PF LHTD S +G GA L Q  + V + +A+ASHR+S TD
Sbjct:  689 SPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTD 1021          
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Match: A0A6H5LHQ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHQ7_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 5.740e-63
Identity = 135/332 (40.66%), Postives = 188/332 (56.63%), Query Frame = 1
Query:    4 PEQRHMIQEEIKKLVANEAIQESISQYVSACHCVPKRDRTVRVVQDYGGLNALLKFQSGGLGDIVTILDEMGESTCFSCLHLASGFLQLKIRYDTR----------RTVGYVRCGFGLKTIPSALASYVRHTLMPVKSKG-VRSWVDDIIHPTKTIEGQHPLLRETLDCL*KRRLSISLPKSEFCEPVVEWLGMMMDGFGIRPASSKIDAIRQLAQPTTVEGVRMLLGMSRYLRQFIPNYST------DLLRYSRFRGERARKLKVRWGVAQREAMTVLVELLTSPPVLAMPNWGLPFRLHTDGSEIGAGAVLTQFSNSVEKVLAYASHRWS 948
            P Q  ++ ++    +    I+ S S + S    V K+D + RV  DY  LNA+ K  SGG+G + T+   +  S  F+ L L S + QL I+   R          R   + RCGFGL TIP+  ++++  TL P ++KG V  W+DDI+  + T+E    L+ E  D L     S+   KS FC   VE+LG M+   G+RPA SKI A+++L  P TV  VR  LG++ YLR F+P++ST      DLLR   F  +RAR  +V WG AQ EA   +++ L + PVLA P+W LPF LHTD SE+ AGAVLTQ   + E  L YASHR++
Sbjct:  130 PVQAEIVNDQADLWLETGVIRYSTSAWCSRTSIVKKKDGSNRVTIDYRPLNAVTKKDSGGIGTLATMHHRIKGSNFFTLLDLPSAYHQLSIKEADRHKTAFRDARGRLYEFTRCGFGLTTIPAVFSAHLGDTLRPTENKGGVERWLDDILLHSATLEEHMALIEEVFDLLQGVGYSVHFKKSMFCMSEVEFLGAMVGRSGVRPAPSKIRAVQELEMPATVGEVRAFLGLAGYLRGFVPDFSTLTAPITDLLRDKAFSSKRARNRRVPWGAAQIEAFQAVIKALVTHPVLAAPDWHLPFTLHTDASELAAGAVLTQPVENREAPLGYASHRFT 461          
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Match: A0A6H5K9Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z4_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.390e-57
Identity = 132/315 (41.90%), Postives = 183/315 (58.10%), Query Frame = 1
Query:   61 IQESISQYVSACHCVPKRDRTVRVVQDYGGLNALLKFQSGGLGDIVTILDEMGESTCFSCLHLASGFLQLKI----RYDT--RRTVG----YVRCGFGLKTIPSALASYVRHTLMPVKSKGVRSWVDDIIHPTKTIEGQHPLLRETLDCL*KRRLSISLPKSEFCEPVVEWLGMMMDGFGIRPASSKIDAIRQLAQPTTVEGVRMLLGMSRYLRQFIPNYS------TDLLRYSRFRGERARKLKVRWGVAQREAMTVLVELLTSPPVLAMPNWGLPFRLHTDGSEIGAGAVLTQFSNSVEKVLAYASHRWSVTD 957
            I++S+S + + C  V K+D T+R+  D+  LN LL   SG LGD+ TI D +     F+ L LASGF Q++I    RY T  R   G    + R GFGL  +P+A    V+  L  +   GV SW+DDI+  + + E     L   L+ L    LS++  K  F     E+LGM++D  G+ PA SK+DAI ++ +P TVE +R  LG++ YLRQF+PNYS      T++LR   F  +RARKL + W VA+ +A   L E L SP VLA P+   PF LHTD S +G GA L Q  + V + +A+ASHR+S TD
Sbjct:    2 IRQSMSPWAAQCLRV-KKDGTLRLCIDWRELNTLLVSDSGDLGDMQTIFDTLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTD 313          
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Match: A0A6H5J659_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J659_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 8.050e-51
Identity = 126/312 (40.38%), Postives = 177/312 (56.73%), Query Frame = 1
Query:    1 TPEQRHMIQEEIKKLVANEAIQESISQYVSACHCVPKRDRTVRVVQDYGGLNALLKFQSGGLGDIVTILDEMGESTCFSCLHLASGFLQLKI----RYDT--RRTVG----YVRCGFGLKTIPSALASYVRHTLMPVKSKGVRSWVDDII----HPTKTIEGQHPLLRETLDCL*KRRLSISLPKSEFCEPVVEWLGMMMDGFGIRPASSKIDAIRQLAQPTTVEGVRMLLGMSRYLRQFIPNYS------TDLLRYSRFRGERARKLKVRWGVAQREAMTVLVELLTSPPVLAMPNWGLPFRLHTDGSEIG 876
            +PE+R MI+ EI++LV    I++ +S + + C CV K+D T+R+  D+  LN LL   SGGLGD+ TILD +     F+ L LASGF Q++I    RY T  R   G    + R GFGL  +P+A    V+  L  +   GV SW+DDI+       KT+  +   +R  ++C    R               E+LGM++D  G+ PA SK+DAI ++ +P TVE +R  LG++ YLRQF+PNYS      T++LR      +RARKL + W VA+ +A   L E L SP VLA P+   PF LHTD S +G
Sbjct:  218 SPEERRMIRAEIQQLVDRGVIRQPMSLWAAQCSCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTILDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIAGDSXRKTVTRRPFEMR--MECFGNLRAR-------------EFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAVASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLG 512          
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Match: A0A6H5KAQ6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ6_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 3.580e-46
Identity = 112/275 (40.73%), Postives = 158/275 (57.45%), Query Frame = 1
Query:    1 TPEQRHMIQEEIKKLVANEAIQESISQYVSACHCVPKRDRTVRVVQDYGGLNALLKFQSGGLGDIVTILDEMGESTCFSCLHLASGFLQLKI----RYDT--RRTVG----YVRCGFGLKTIPSALASYVRHTLMPVKSKGVRSWVDDIIHPTKTIEGQHPLLRETLDCL*KRRLSISLPKSEFCEPVVEWLGMMMDGFGIRPASSKIDAIRQLAQPTTVEGVRMLLGMSRYLRQFIPNYS------TDLLRYSRFRGERARKLKVRWGVAQREA 777
            +PE+R MI+ EI++L+    I+ S+S + + C CV K+D T+R+  D+  LN LL   SGGLGD+ TI D +     F+ + LASGF Q++I    RY T  R   G    + R  FGL  +PSA    V+  L  V   GV SW+DDI+   +T E     L   L  L    LS++ PK  F     E+LG+++D  G+ PA SK++AI  + +P TVE +R  LG++ YLRQF+P YS      TD+LR   F  +RARKL ++WG A+  A
Sbjct:  185 SPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRAAFGLTVLPSAFTRRVKSALGIVD--GVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPKCIFGASSQEFLGIIIDATGMHPAPSKLEAIANMPRPQTVEDLRTFLGLTGYLRQFVPQYSLVAAPLTDILRNKDFASKRARKLPIQWGEAEEHA 457          
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Match: A0A6H5KW13_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW13_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 1.510e-41
Identity = 110/306 (35.95%), Postives = 163/306 (53.27%), Query Frame = 1
Query:    1 TPEQRHMIQEEIKKLVANEAIQESISQYVSACHCVPKRDRTVRVVQDYGGLNALLKFQSGGLGDIVTILDEMGESTCFSCLHLASGFLQLKIRYDTRRTVGYVRCGFGLKTIPSALASYVRHTLMPVKSKGVRSWVDDIIHPTKTIEGQHPLLRETLDCL*KRRLSISLPK-SEFCEPVVEWLGMMMDGFGIRPASSKIDAIRQLAQPTTVEGVRMLLGMSRYLRQFIPNYS------TDLLRYSRFRGERARKLKVRWGVAQREAMTVLVELLTSPPVLAMPNWGLPFRLHTDGSEIGAGAVLTQ 897
            +P    ++ ++I  ++    +  S S++ +    V K+D T R+  D+  LN LL+    GLGDIV + D M  S  FS + L S + QL++    R     +R   G               L+    KGV  W+DD+   + T E    L+R  +  L  R  + +  K SEF    +E+LG+M+   G+RPA SKI+A+++LA PT V  VR  LG++  LR F+PN+S      ++LLR   F  ++AR  KV WG  Q EA   ++ELLT+ PVL +P+W  PF +HTD S +  GAVLTQ
Sbjct: 1722 SPHMSDILMKQINDMLEAGILSFSTSEWCARIVPVLKKDGTYRLCIDFRELNKLLQKNINGLGDIVGMYDRMKGSKYFSSIDLKSAYHQLRVAQKNRHRTA-LRDPTG--------------RLLQWNGKGVEKWLDDMGLHSATFEEHLELVRTVVKILIARGYTGNFQKKSEFFLSEIEFLGVMVGRDGVRPAPSKINAVQELAIPTNVGEVRSFLGLAGSLRGFVPNFSAITAPVSNLLRNPAFSSKKARLKKVPWGSEQAEAFLKIIELLTTHPVLILPDWSQPFTVHTDASTLATGAVLTQ 2012          
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Match: A0A6H5JIH2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH2_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 1.800e-41
Identity = 90/220 (40.91%), Postives = 128/220 (58.18%), Query Frame = 1
Query:  316 GFGLKTIPSALASYVRHTLMPVKSKGVRSWVDDIIHPTKTIEGQHPLLRETLDCL*KRRLSISLPKSEFCEPVVEWLGMMMDGFGIRPASSKIDAIRQLAQPTTVEGVRMLLGMSRYLRQFIPNYS------TDLLRYSRFRGERARKLKVRWGVAQREAMTVLVELLTSPPVLAMPNWGLPFRLHTDGSEIGAGAVLTQFSNSVEKVLAYASHRWSVTD 957
            GFGL  +P+A    V+  L  +   GV SW+DDI+  + T E         ++ L    LS++  K  F     E++G ++D  G+ PA SK+DAI ++ +P TVE +R  LG++ YLRQF+PNYS       ++LR   F  +RARKL ++W  A+ +A   L E L SP VLA P+   PF LHTD S +G GA L Q  + V + +A+ASHR+S TD
Sbjct:    8 GFGLTVLPAAFTRRVKSALGHLS--GVFSWLDDILIASDTREEHLATQTLVMNRLLASGLSVNFAKCIFGAASQEFVGTIIDSTGLYPAPSKVDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLANILRNKAFASKRARKLPIQWSAAEEDAFQYLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTD 225          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig991.20545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIS6_9PHAE4.770e-6742.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQV6_9PHAE3.930e-6642.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFK7_9PHAE1.920e-6442.69Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEH2_9PHAE5.610e-6442.69RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5LHQ7_9PHAE5.740e-6340.66Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K9Z4_9PHAE1.390e-5741.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J659_9PHAE8.050e-5140.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAQ6_9PHAE3.580e-4640.73Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KW13_9PHAE1.510e-4135.95Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JIH2_9PHAE1.800e-4140.91Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig991contigD-dichotoma_M_contig991:242095..243108 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeNematoda
Seed ortholog score69.7
Seed ortholog evalue1.4e-09
Seed eggNOG ortholog281687.CJA36470a
EggNOG free text desc.K02A2.6-like
EggNOG OGs1M2IG@119089,38F42@33154,3BA5H@33208,3CWAK@33213,40IQ5@6231,40X6S@6236,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelRhabditida
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size957
Cds size465
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig991.20545.1prot_D-dichotoma_M_contig991.20545.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig991 242113..242616 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931263.9802403-UTR-D-dichotoma_M_contig991:242094..2421121622931263.9802403-UTR-D-dichotoma_M_contig991:242094..242112Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig991 242095..242112 +
1690799693.110676-UTR-D-dichotoma_M_contig991:242094..2421121690799693.110676-UTR-D-dichotoma_M_contig991:242094..242112Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig991 242095..242112 +
1622931264.048001-UTR-D-dichotoma_M_contig991:242616..2428291622931264.048001-UTR-D-dichotoma_M_contig991:242616..242829Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig991 242617..242829 +
1690799693.1422205-UTR-D-dichotoma_M_contig991:242616..2428291690799693.1422205-UTR-D-dichotoma_M_contig991:242616..242829Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig991 242617..242829 +
1622931264.0759475-UTR-D-dichotoma_M_contig991:242847..2431081622931264.0759475-UTR-D-dichotoma_M_contig991:242847..243108Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig991 242848..243108 +
1690799693.152999-UTR-D-dichotoma_M_contig991:242847..2431081690799693.152999-UTR-D-dichotoma_M_contig991:242847..243108Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig991 242848..243108 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931264.0007393-CDS-D-dichotoma_M_contig991:242112..2423891622931264.0007393-CDS-D-dichotoma_M_contig991:242112..242389Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig991 242113..242389 +
1690799693.1234732-CDS-D-dichotoma_M_contig991:242112..2423891690799693.1234732-CDS-D-dichotoma_M_contig991:242112..242389Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig991 242113..242389 +
1622931264.024753-CDS-D-dichotoma_M_contig991:242428..2426161622931264.024753-CDS-D-dichotoma_M_contig991:242428..242616Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig991 242429..242616 +
1690799693.1328208-CDS-D-dichotoma_M_contig991:242428..2426161690799693.1328208-CDS-D-dichotoma_M_contig991:242428..242616Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig991 242429..242616 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig991.20545.1

>prot_D-dichotoma_M_contig991.20545.1 ID=prot_D-dichotoma_M_contig991.20545.1|Name=mRNA_D-dichotoma_M_contig991.20545.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=155bp
MIQEEIKKLVANEAIQESISQYVSACHCVPKRDRTVRVVQDYGGLNALLK
FQSGGLGDIVTILDEMGESTCFSCLHLASGFLQLKIRYDTRRTVGYVRCG
FGLKTIPSALASYVRHTLMPVKSKGVRSWVDDIIHPTKTIEGQHPLLRET
LDCL*
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mRNA from alignment at D-dichotoma_M_contig991:242095..243108+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig991.20545.1 ID=mRNA_D-dichotoma_M_contig991.20545.1|Name=mRNA_D-dichotoma_M_contig991.20545.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=1014bp|location=Sequence derived from alignment at D-dichotoma_M_contig991:242095..243108+ (Dictyota dichotoma ODC1387m male)
ACTCCTGAGCAACGGCACATGATTCAGGAAGAGATCAAGAAACTGGTCGC TAATGAAGCTATACAGGAATCCATAAGTCAGTATGTTTCCGCTTGTCATT GCGTTCCAAAACGCGACCGTACGGTTCGGGTCGTTCAGGACTATGGGGGG CTAAATGCTCTCCTGAAATTTCAAAGTGGTGGGCTTGGGGATATCGTTAC AATCCTGGACGAGATGGGGGAGTCTACTTGCTTCTCATGCCTACACTTGG CATCAGGCTTTTTACAGCTAAAGATACGATACGACACGAGAAGAAGTTAG GCACCTTGCAGCTTTCAGAGACGAGAAAGGTAAGCTGTGGGGTATGTCAG ATGTGGGTTCGGGTTGAAGACTATTCCCAGTGCCCTTGCCAGCTACGTGA GACACACTCTTATGCCTGTCAAATCCAAGGGGGTCCGCAGCTGGGTTGAT GATATCATACACCCTACTAAGACAATAGAGGGTCAGCATCCCCTGCTACG TGAAACGCTGGACTGCCTATGAAAGCGACGACTCTCCATAAGCCTCCCGA AGTCCGAGTTTTGCGAGCCGGTTGTGGAGTGGTTAGGGATGATGATGGAT GGGTTCGGGATACGGCCAGCATCTAGCAAGATTGATGCCATCAGGCAACT GGCACAGCCTACGACAGTTGAGGGTGTACGTATGTTGTTGGGGATGAGCA GGTATCTCCGACAATTCATTCCCAATTACAGTACCGTAGTTGCTCCCATC TAGGATCTCTTGCGGTATTCCAGGTTTCGCGGAGAACGGGCACGGAAGTT AAAAGTACGATGGGGGGTAGCTCAAAGAGAAGCGATGACTGTACTCGTTG AGTTGCTCACCAGTCCTCCCGTCTTAGCCATGCCGAACTGGGGTCTACCG TTTCGCCTTCACACAGACGGATCTGAAATCGGAGCAGGCGCAGTGCTCAC ACAGTTCAGTAACTCAGTCGAGAAGGTGCTTGCGTATGCAAGCCACCGAT GGTCGGTAACGGAT
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig991:242095..243108+

>mRNA_D-dichotoma_M_contig991.20545.1 ID=mRNA_D-dichotoma_M_contig991.20545.1|Name=mRNA_D-dichotoma_M_contig991.20545.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=930bp|location=Sequence derived from alignment at D-dichotoma_M_contig991:242095..243108+ (Dictyota dichotoma ODC1387m male)
ATGATTCAGGAAGAGATCAAGAAACTGGTCGCTAATGAAGCTATACAGGA
ATCCATAAGTCAGTATGTTTCCGCTTGTCATTGCGTTCCAAAACGCGACC
GTACGGTTCGGGTCGTTCAGGACTATGGGGGGCTAAATGCTCTCCTGAAA
TTTCAAAGTGGTGGGCTTGGGGATATCGTTACAATCCTGGACGAGATGGG
GGAGTCTACTTGCTTCTCATGCCTACACTTGGCATCAGGCTTTTTACAGC
TAAAGATACGATACGACACGAGAAGAAATGATTCAGGAAGAGATCAAGAA
ACTGGTCGCTAATGAAGCTATACAGGAATCCATAAGTCAGTATGTTTCCG
CTTGTCATTGCGTTCCAAAACGCGACCGTACGGTTCGGGTCGTTCAGGAC
TATGGGGGGCTAAATGCTCTCCTGAAATTTCAAAGTGGTGGGCTTGGGGA
TATCGTTACAATCCTGGACGAGATGGGGGAGTCTACTTGCTTCTCATGCC
TACACTTGGCATCAGGCTTTTTACAGCTAAAGATACGATACGACACGAGA
AGAACTGTGGGGTATGTCAGATGTGGGTTCGGGTTGAAGACTATTCCCAG
TGCCCTTGCCAGCTACGTGAGACACACTCTTATGCCTGTCAAATCCAAGG
GGGTCCGCAGCTGGGTTGATGATATCATACACCCTACTAAGACAATAGAG
GGTCAGCATCCCCTGCTACGTGAAACGCTGGACTGCCTATGACTGTGGGG
TATGTCAGATGTGGGTTCGGGTTGAAGACTATTCCCAGTGCCCTTGCCAG
CTACGTGAGACACACTCTTATGCCTGTCAAATCCAAGGGGGTCCGCAGCT
GGGTTGATGATATCATACACCCTACTAAGACAATAGAGGGTCAGCATCCC
CTGCTACGTGAAACGCTGGACTGCCTATGA
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