mRNA_D-dichotoma_M_contig98.20452.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig98.20452.1
Unique NamemRNA_D-dichotoma_M_contig98.20452.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig98.20452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig98contigD-dichotoma_M_contig98:301399..309296 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size343
Cds size183
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig98.20452.1prot_D-dichotoma_M_contig98.20452.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig98 301436..301951 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931248.5637932-UTR-D-dichotoma_M_contig98:301398..3014351622931248.5637932-UTR-D-dichotoma_M_contig98:301398..301435Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig98 301399..301435 +
1690799686.1868715-UTR-D-dichotoma_M_contig98:301398..3014351690799686.1868715-UTR-D-dichotoma_M_contig98:301398..301435Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig98 301399..301435 +
1622931248.6081254-UTR-D-dichotoma_M_contig98:301951..3019891622931248.6081254-UTR-D-dichotoma_M_contig98:301951..301989Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig98 301952..301989 +
1690799686.2333076-UTR-D-dichotoma_M_contig98:301951..3019891690799686.2333076-UTR-D-dichotoma_M_contig98:301951..301989Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig98 301952..301989 +
1622931248.6233897-UTR-D-dichotoma_M_contig98:309211..3092961622931248.6233897-UTR-D-dichotoma_M_contig98:309211..309296Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig98 309212..309296 +
1690799686.246713-UTR-D-dichotoma_M_contig98:309211..3092961690799686.246713-UTR-D-dichotoma_M_contig98:309211..309296Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig98 309212..309296 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931248.5798872-CDS-D-dichotoma_M_contig98:301435..3014821622931248.5798872-CDS-D-dichotoma_M_contig98:301435..301482Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig98 301436..301482 +
1690799686.196761-CDS-D-dichotoma_M_contig98:301435..3014821690799686.196761-CDS-D-dichotoma_M_contig98:301435..301482Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig98 301436..301482 +
1622931248.5929904-CDS-D-dichotoma_M_contig98:301815..3019511622931248.5929904-CDS-D-dichotoma_M_contig98:301815..301951Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig98 301816..301951 +
1690799686.2148948-CDS-D-dichotoma_M_contig98:301815..3019511690799686.2148948-CDS-D-dichotoma_M_contig98:301815..301951Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig98 301816..301951 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig98.20452.1

>prot_D-dichotoma_M_contig98.20452.1 ID=prot_D-dichotoma_M_contig98.20452.1|Name=mRNA_D-dichotoma_M_contig98.20452.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=61bp
MAIEDSSRVFNAGRERALELQYMRLLVKKLIPLAFAEDAEFRILLVSAAK
TWSPHCTEGA*
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mRNA from alignment at D-dichotoma_M_contig98:301399..309296+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig98.20452.1 ID=mRNA_D-dichotoma_M_contig98.20452.1|Name=mRNA_D-dichotoma_M_contig98.20452.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=7898bp|location=Sequence derived from alignment at D-dichotoma_M_contig98:301399..309296+ (Dictyota dichotoma ODC1387m male)
CCGAGCGAACAACGTGGAGCAAGTTATAGCTGGAGTCATGGCCATCGAGG
ATTCATCGCGGGTATTCAACGCTGGCCGAGAAAGGTACAAACTGCTTTTC
GGAAGTGTGTTCATTCAGCACTCGCGGCATATTCATGTGATATTTTGTAA
CGTGTCATTATGATAGTTCCCCTCACGGTAATATGGCTGATGCTCTGTGC
TCTCTACTACTGTAGATACCTTGTTTTGAATTATCAAAATCGCCTCCCTC
TTGAATGTTGGATGAGAGCAGTGCGCACACGCCGACCTTCAATTTTAAAG
AGTGCGCGGAGATCATTTGATGAACTTTCAGGATTCATGATTGCCTACTG
CATATTCCCTCAACAAACCATCTGTGCTGTCCTGCGTATGTCCCTGCCAC
GTCGCCGAATCACGCAGAGCACTAGAATTGCAATATATGCGGCTCCTCGT
CAAGAAATTGATTCCATTGGCTTTTGCAGAAGATGCTGAATTCCGCATTC
TACTAGTTTCCGCTGCGAAGACGTGGTCCCCACACTGCACAGAGGGCGCG
TGAAGCACATTCTTGTAGAGATGTACAAGGCGACGAAGGAGGTTAGTGCC
GGAGTTTTCCTCGCAGCATCGAAACCTTGATCTTTCACTGACACTTTTTA
CTGTTCGATGAATGACCACGCTCATGTTTTGCTGTAAGAAATTAAGAATT
GCTCGACGTGCACCGGTCAAAATTTGCAAGAGTGTCTCCAGTCCTACAAA
CTAAACGAATACTCTTCTTATTACCAACACGCACACTACTTTGCAGTCTA
TCATTGCGGGATTGGAGGAGAAATCGCTGCGGCTTATCTGCCGATCGTGC
ACTTTGTTGAACGATCTCGTATGTTCACTCAGTTCCGTGTCTAGTGCTCA
CAGCAGTCTCAGATCAGTTTACAGAAATGGATTAGCTTACAACGTATGCC
TCACTTAACCCACCGGGAAACACGCAGTTATAGGGACCCAATCACAAGAG
AAAGACCTCACCACAAGGATAGACCTAGAATACCAGACACCCACAGAGAC
TCATCACGTGTTATACAAGTGTACCAGTAGGATACCAGGGCGAGAGCGCG
CAAAGACAGAGTGAGCACAAGGGTGCCAACTAGCTCTGCTCCATAGTCAC
AACCGATACAAGTCGTAGTCCATAGCAACAGTAGTGGACCTCAGGGGCGA
CTAAACGAAGGTTCTGTAATCGTCATTTGTCAACACCCTCCCTCGATTGC
AGAACCGTCTATCGACCAAGCGAAGGATCCTTTTCACCCTCATAAACCGA
ACGTACAAACGCCTTAGTCCAGAGTATGGGGGTGCAGTACCTTTCAAACG
TAAAAAATACTCTTAGTACTCAGCCACATCCCGGTATCACCACCTGCTTA
CTTCACTACGTTCATTAGCACATCACGATGCTCGGCGAACTTCTCCACTG
GGAGCGGTTTGGTCAAGAAGTCTGCTCTCTGCCTCTCTGTTTTACATACT
TGACTTCAACCTTTCCTTGCTTCACCTGGTCGCGGATGAAATGGTAACGC
ACATCGATGTGCTTCGTCCGCTTCGAGCTAAGGGGTTTTTAGCTAGCTGA
ATAGCTCCAACGTTATCCTCAAAAAATAGTAACAGGGGGTAAACACACTC
TTGGACGCAAGAATTCCAACACCTGACTAATGGCCAGAACCTCCTTCGTA
GCCTCCGCAAGGCTAATATACTCAGCCTCGCTCGAAGAGGTGGCAACGCA
TCTCTGCGTTCTAGAAAACCAAGACACTGCCGTTTCCCCAAACATCACAG
CCCCGCCAGACACAGATCTCCGAGACTCCCTGTTGTCGGCGTACGTCGCA
TCTGCGAAGGCAGTGAGGCCGTCCCTCCCTTGCCGGGTGAACCTGAGCCC
CATCTCGCGCGTACCCTTGAGATACTCGAGGATCCGCAACACTGCCTTCC
AGTGCTGCTTCGAGGGATCTTGTGCAAAACACGCGACGGAGCGAACGGCG
CTCGCGATGTCGGGGCGCGTGCAGTTGGCCAACCACATCAGCCCGCCTAC
GGCCTCCCGGTAGGGCTCCGTGCAGCGATCTTCCCAGTCCCTGCGAGACA
TTAGGTGAACCGTTTGACAAGCGGGGGTAGGGCTTGAATGAGTAACGTGG
AAACGGTCGGTCAGCTGGTCAATGAAGGTGGTTTGTGTGGCCTTCAGTGT
GCCCTGCTTCCTGTCACGGGAGAACGCGCAGCCGGTGTAGTGCGTTAGTT
GTCCAAGATTGTTTGTGGGGAAAGCCTTGTTGAGAAATTCACATAGTTCA
TTGCAGTCATTCTCCTTTCCAGCTACTACCAAGTCATCCACGTGAACGGC
CATCATCAGTACTACCTGTTTTTCCCTCTGCAGTCGGAAAACGCAGGGGT
CAGCCGCACATTGTTCGAGACCGTAGCTCTGCAGTGTGGACACGAGTAGG
TGATTCCATTCGGCCGGAGACTGACGTAAACCATAGATACACCGGCGGAG
TCTGACCGTCGTTCCAGATGCTCTACCACACCCGGGAGGGAGTCTCATGT
ACACTTCCTCCTTCAGATCAGACTGCACGAAGGCTTGTCTCACGTCGAGA
TGGCAAAGATCCAAATCGAGCTGGACAGCTACAGCCAGGACCAGCCTTAC
CGAGGGAGACTGAGGAGTGGGACTGAACGTTTCGCCAAAGTCTTTACCGG
GTACCTGGCTGAAGCCCTTCGCTACAAGCCTAGCCTTCGCACGAACTACC
TCTCCTTCAGCACTTACTTTCCATTTGAAAATCCACTTCGATTCTACGGG
TTTCCTATCCTTCGGTGCCTCAACATACTCAAACGTCTTGTTCTCCTTGA
GGCCTTCATATTCCGCTTCCATTGCTCGTAGCCACAGTTCCTTGTGGGCG
GACTTCATGACCTTGCTGTAGCTGGAGGGGGCTGGCTCCACATCCGCCAG
AGGTCGGCCGATGGGTTCGCCCTGTCCAGTAGCCATGAGACCGATGAACC
AAGTGGTAGGTCCCAGGTGTTGCCCTTGGAGCGGTGCAGTCGTTGATGGA
GGCCCGGTCGATGCGGAGTGGTCGTCGGCAAGTAGTCCCACGTCACGCAG
GGCCCTAGTCTGAGCTCGGGTCCTGCCAAGCGTTAAGGTTTCTTCGCCGG
GGGGGTCCGTAAGGTGGGCCCCTAGTTGTCGTTGTGCCGTGGTTGCCGCG
GTGTTGCGTTGGTCCGGGTAGAGATGCTGCGGCTCTGCCCCGTCGGAGAT
TGTCCCGGGATCCCCCATTGGTGAATTGTCCCGCGGATCTACCACCGAGG
GGCTGTCGTCTTGGTCTCCGTTTGAAGGATTGTCCCGCAGATCTCCCACT
GAGGGGTCGGCGTCTTGGTCTCGGCCTGTTGCACCAGGCAGTCCTTCTCG
GTTGCTCCGTCCGAGAGCATCGACAGCAGCGTCATCGTCGTTGAAGTCTC
CACTCGACGGCTCCGTTGATGATGAAGGCGGACCCACGCCCCCTCGCTGC
CCTCGACGATGTCTTGCTCATTTGAAACTTCTCCACTTGCTAGTCTTGGG
TCATGATATTCTTCTGCAGTAGTTGGTGGTCCCACGTTCCCCGATGAAAT
CCCAGTGTCCCTGTCCGAGGTCCCGATGTTCCGGTTCGGGGGTCCGATGT
TCCGGTTCGCGGGTCCGATGTTCCGGTTCACGCCTCCGACGTTCCGGTTC
ACGCCTCCGATGTTCCGGTTCACGGATCCCAGGTTCCCGTTCGCGGTTCC
CAGGTTCCCGCTGGGGGGTCGTGATTCAGTCAGAGTCATCACCGTAGTTC
TCGCGGCAGACTGGCCGTCAGGGTCGCCCTCTGTCTGACCTACCTCGTTG
ATAGCCGAGACCCCGTTGTTGTTGCCCATGGGGTAGCGTCCCCGACGGGG
CTCGGCGGCAGGGCCTAGGGTCTTCCACGTGACGTCACGGGAGTTGATGA
CCTGACGTGAGCTCGCAGACATCAGCCTGAATGTGTCTTGAGGATGGTAC
GGGGCAGGGCCAAGGTAGAAGCACCGGACGGCCCGGGGAAGATCCTTCGA
GCTGCGCTTCGTATAGAAGAAAGCAGGCTTCAGGAACGGATGCATGCGAG
CAGGCGGCTTATCCCCGGACCACATCTGGTCCGGAGATCGCATTTCGGGG
TTAGCTCGGGTAGCAGTTCGGTTGAGTGCACTGACAGCCCAGAGGGAGGC
TTCATACCACAAGGATGGACAGTCGGGGACATTTTCCCCCACATACAGTT
CCTTCGCATGAAGACGAGCTGCCAGCTGGGCCTTCTCGACAAGAGCAATG
CCTCTCTCCACCACCCCATTGAACTGCGGGCGGTCTGCTGGAGAGAACTC
CTGCCGGATCGTATGCTCCGAACACAGTTCCGAAAATCTGCCCTTAAACT
CACCCCCGTTGTCGGTCCTGATAACGTGAACCTTACCTTCGCCCGACACA
TCCGAGAGAAAATCCCTTAGTCCTAAGTACGCATCACTCTTACTAGCTAG
AAAGTACACAAAGCACTTTCGGGTAAAGTCATCCCGGACAAGCATTATGT
AGGACTTGCCCTTAACTGACACTTGTTTAGGTCCCGCCAAATCTATGTAC
ACTCTAAAGAGCTTCTTGTTGGCTCGGTTCGTTGCTACCTTGGGTATCGG
CTTACGAAATCCCTTAGCCTGGGCGCAGGCGTTGCAAGGCCTGAGAGTGC
CGGTCAGAGAGATACCGAGTTGCTTTGCGGTAGCTCGCAACAGATCTTCA
TGGGCGTGCGCATGTGCTGAGTGGAATGAATTGATATCGGCAGTTTTGGG
GTTAGCCGTGCCTGGTGCAATAGCGGCGTTGCCCAGGTGAGGCTCATTAC
TGCCACTGTGGGCACCCTGCAGAGCGAAGTTTACCGTTTCACGAAGCGTT
GTTGGCGTATCAGGCGTAACACGTTGGGCGCTACCACAATAGGTGGTACC
CTGAAGCTTAAAGTTCAGTTCAGTCCCAAGCATGTTGATTCTGCCTCCGC
CAACAATAAACTGAGTTCCGAGTTTGTCAAGCTTCCCCATCGAAATGAGG
TTGTATCCCGCATCAGGCACGTGAGCAACGTCAGTTACCAGCAGGACATG
ACCAGACTCAGGAAATTCAAGTTTTAACGAACCGTACCCCGTGATAGGCA
TCTCGCTGCTATCTGCCGTCACAATCTTCTCAGGTTCAGCACATCTTCTG
AAGTCGAAAAGCATTCTACTGCAATTCGTTAGCGACCACGAGGCAGCCGA
GTCTAAGTACCAAGTTTCAAGGCCGAGGTTGCACACATGATTCGACACCG
ACTTACCTGGGTTACCCCTTGCCACCAGAGCTGTAGCTGGAGGGGCAGGA
TCCGGCTGCCCGGTAACCCTGATGTCCAGCCCCCCGAAAGATCCACAGAA
ATCGTCGAGCTCCTCCGACCCTTCATAACAAACGAAATTATCTACTCCCG
GTCTCGTGGAATCACCAAGGCTCGGCTGACTCGGGCCAGTAGCCAGGAAC
GCGCACATGCCGGGATGGACACCGCTAGGGGGAGCCGGAGGGGTCAGAGC
GACGAAGGCTTTCGCCTTCTTACAATCCTCTGTGGAGTGACCACCGATCT
TACTATGGTCGCACCTAATCACCGTGCACTCATGCCTGTAATGGCCAATA
CAGTTGCAAGCAAAACACCGAACGTTCTCTTTTCCCTTACCGCCGTTAGT
ACTCGGTTTTGGGTCCCCGTCCCTGATTGTGCCGCGGGGGCCTGCTGCCT
CCTCCCTCGTAGCGGGGCGACCGCGAGAGGGAGAATGTGCACGGTCACGA
GCGCTAAATGCCTTACTGCTACTTCGCTTCGACGACCTGAGGTCTTCGAA
ACGAGTTCTAACTGTATACCCCTACTTGAACCGTAGAGAGTGACCCACAC
TGGCGCAGTAGTCTAACCTCTTGGTCATATTCGGCGGGGAGTCTACGGAG
GAAATCCGTTAACAGTATCTGTTCGCCGATGGGTTGTCCCAGTCTACCCA
GTCTCTTACAAACTCGTTCGAACTTGCCCAGTAAGACAAGTGGGTCCCCG
TTCGGTTCGAGACGGGCTGAGTCCATCTCGTGCCGCAGTTGTTCGATAAC
TACGGTGTTCTTCGGTCTGAAGCGCTCGTCAAGAGCCCTCCAGGCAGCAG
ACGGCGCCTTTGCATCCACTATCACATCCTCTACGGTAATGGTGGCGGCT
GCTTGTAGCAGGCAGTTCCACGCATTCTGCGTCTCGTGCAAGATGTTGCT
ATCCACACCCTCAGCAAGGTAGTCATTATCCCGTTTCATGGGATCGGACA
CGGCTAGTGGAGCAGTACTCAGCAATGCTCGGTTAAAGCCCCAGCGTACC
GCAAAACGCATAAATTTCTCTTGCCACTCAATAAATTGAGTCGAGTTGCC
ATCGAAATTCGGCGGGGATTCAGAAACCCGTATCTTCTTAGTCTGACGTT
CGTATACGCAACTGTTGTGGGGGGTCTACGTGGGGCATAAGTCTCTGCAC
CATCGATTACATCCTCATCATCCTCATCATCCTCTTCGCCGGAGAGACCA
AGTGCATAGGTATCTAGGTCTCGTTTGAGCTTCGCGCCCAAAACCCGGTG
TAAACGGTGGTGTGGGACTGCGACTCTGTTTGCGTACGGCTGCTCTAACT
GGAACACCCTTACTCTCCTCGTTAGTGTATCTGGATTCCATCTGGTCCAT
CCTACGGTTTGTTTCCTCTTGACTCTTCTTAGCTTCCTCGAGATTCTTCA
GGATTTGAAGAAGAATAGAGTCTGTGTTGGGTCCTACAGGCCGCGTGTTG
ACCGGGGGTGTGTTTGCTGGCTGTACATTCTCGACGTTGTCCACACCATT
TCTTGACTGTTCAACTGGAGAGCTTTGCTGTGCAGGGTTAGTCATCGTCA
ACGTTATCAACGTTTTCGTGGGAGGTTTATGGCAATTCTCTGTTCAGTCT
ACTGAGTAACACCAGTCAGACAAGAGATGTTTCACGAACCCTCTACCTTG
TACGAGAGTTCGAGGCTTGCCACTTACAGTGCACCACTGCAATCACCTCC
CTGACCGACACCTGAAAAGTCGCGCGCGATAGACTTCGGAACAGGCTCGT
AGAGCGTTGACTTTTAAACGTCAAAATTTTAACGTGTGGAACGATCTCAT
ATGTTCACTCAGTTCCGTGTCTAGTGCTCACAGCAGTCTCAGATCAGTTT
ACAGAAATGGATTAGCTTACAACGTATGCCTCACTTAACCCACCGGGAAA
CACGCAGTTATAGGGACCCAATCACAAGAGAAAGACCTCACCACAAGGAT
AGACCTAGAATACCAGACACCCACAGAGACTCACGTGTTATACCAGTGTA
CCAGTAGGATACCAGGGCGAGAGCGCGCAAAAACAGAGAGTGAGCACAAG
GGTGCCAACTAGCTCTGCTCCATAGTCACAACCGATACAAGTCGTAGTCC
ATAGCAACAGTAGTGGACCTCAGGGACGACTAAACGAAGGTTCTGTAACC
ATCATTTGTCAACACACTTCAGTATCGATCTGTGGACTTGCAAGGTGTCA
GGGAGAAAATTCCTGGGTATCTACATCTTCTAGGTGGACCGGAACTTTGC
TTTGCATGAGATGACATGACATGACATGACGCATTGTTATCGGTGAGAAC
ACGCATCGCATCGCATTGCATCGCATCGCATCGCATCAGTCAAAACTTAG
GCCCTTTTGCTTTCGCTGTGCACCCAATCCGCTCCGTCGAAAATCCAAGT
GAAATTGCCATTACCCTCCGACTTGATATCAGTATTCGAATGAAACAATA
ACACTGCCGGCAGGTGAAGCACTACTGCCGGCCCGATCTCGAGGCCACAA
ACACCGTGAGGCAGCGGAGATGCTGTGGAAGATCGCCAAAGCCACCAT
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig98:301399..309296+

>mRNA_D-dichotoma_M_contig98.20452.1 ID=mRNA_D-dichotoma_M_contig98.20452.1|Name=mRNA_D-dichotoma_M_contig98.20452.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=366bp|location=Sequence derived from alignment at D-dichotoma_M_contig98:301399..309296+ (Dictyota dichotoma ODC1387m male)
ATGGCCATCGAGGATTCATCGCGGGTATTCAACGCTGGCCGAGAAAGATG
GCCATCGAGGATTCATCGCGGGTATTCAACGCTGGCCGAGAAAGAGCACT
AGAATTGCAATATATGCGGCTCCTCGTCAAGAAATTGATTCCATTGGCTT
TTGCAGAAGATGCTGAATTCCGCATTCTACTAGTTTCCGCTGCGAAGACG
TGGTCCCCACACTGCACAGAGGGCGCGTGAAGCACTAGAATTGCAATATA
TGCGGCTCCTCGTCAAGAAATTGATTCCATTGGCTTTTGCAGAAGATGCT
GAATTCCGCATTCTACTAGTTTCCGCTGCGAAGACGTGGTCCCCACACTG
CACAGAGGGCGCGTGA
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