mRNA_D-dichotoma_M_contig961.20329.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig961.20329.1
Unique NamemRNA_D-dichotoma_M_contig961.20329.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
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BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Match: A0A6H5K309_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K309_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 3.730e-63
Identity = 118/233 (50.64%), Postives = 149/233 (63.95%), Query Frame = 1 
Query:  226 SPSTETRHAYVPLGPRDTFPFVDASERSTRPSERSIFFNVAVRNDTSPRRSRLVELTSKFRTDHPEFNAFVNEYA-LGPVHYRKMLLDTSFTICPGGHNPETFRMFESLEAGSIPIVSRRDYLYPSYKAPF---PCGKGDATWNTVAASPFAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMRRAYLSVLNFGQGYEMWPQDGPIVLDGFPVPSKPYPHTPG 912
            S   E R+AY+PLGPRD F FV ASERS   S R +  N  V  +TS RR+ L E+ S ++  H +   + +    L    +R +LL + FT+ PGGHNPETFR FE+LEAGSIPI+S+ DY  P++        CG GDA WNTVAASPFAQAVSV +WDELP+LL +L      +LD+LQAD   WY+ALM R Y S+L+FG G ++WPQ GPI+ D        Y  TPG
Sbjct:  194 SAEQEQRNAYIPLGPRDNFAFVSASERSPA-STRPVLLNFVVDPETSSRRAHLAEVVSDYQALHTDLEIYASTTPDLNASQWRDLLLRSRFTVSPGGHNPETFRTFEALEAGSIPIISKSDYTDPAFHKEIRVEACGTGDAAWNTVAASPFAQAVSVNTWDELPELLDRLDAETDSFLDRLQADCGEWYDALMNRTYASLLHFGDGLDLWPQAGPILAD--------YRKTPG 417
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BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Match: D7G272_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G272_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 7.330e-62
Identity = 105/210 (50.00%), Postives = 147/210 (70.00%), Query Frame = 1 
Query:  238 ETRHAYVPLGPRDTFPFVDASERSTRPSERSIFFNVAVRNDTSPRRSRLVELTSKFRTDHPEFNAFVNEYALGPVHYRKMLLDTSFTICPGGHNPETFRMFESLEAGSIPIVSRRDYLYP--SYKAPFPCGKGDATWNTVAASPFAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMRRAYLSVLNFGQGYEMWPQDGPI 861
            E R  Y+PLGPRDTFPFV + +R    S RS+FFN+ VR +T  RR  L+E  S ++  +P      N  ++    +++++LD+ FT+CP G NPETFR++E+LEAGSIPIVS+ D+ +P    K+   CG GD  WNTVAASPFA+ VSV +W ELPDLL +L+  P EY+++LQ + VAWY   M + Y S+LNFG+G++++PQ+GPI
Sbjct:  160 EPRRPYLPLGPRDTFPFV-SDDRRPLASSRSLFFNLQVRPETQGRRGELIETASIYQLSNPGLECATNRPSISKTAWQELVLDSKFTLCPAGRNPETFRLWEALEAGSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNTVAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSMAMTQTYTSLLNFGEGHDLFPQEGPI 368
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BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Match: D7G273_ECTSI (Transmembrane protein 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G273_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 3.630e-61
Identity = 104/208 (50.00%), Postives = 147/208 (70.67%), Query Frame = 1 
Query:  244 RHAYVPLGPRDTFPFVDASERSTRPSERSIFFNVAVRNDTSPRRSRLVELTSKFRTDHPEFNAFVNEYALGPVHYRKMLLDTSFTICPGGHNPETFRMFESLEAGSIPIVSRRDYLYPSYKA--PFPCGKGDATWNTVAASPFAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMRRAYLSVLNFGQGYEMWPQDGPI 861
            R+A++PLGPRDTFPFV + +R    S RS+ FN+ VR DTS RR+ LV++ S++ +D+P+     N   + P  ++ ++LD+ FTICP G NP TFR++E+LE GSIPIVS+ D+  P+  A     CG GD  WN VAASPF +AVSV  W ELP LL +L+  P +Y+++LQ D VAW+ + M + Y SVLNFG+G++++PQDGP+
Sbjct:  222 RNAFLPLGPRDTFPFV-SEDRRPLASSRSLLFNLQVRPDTSDRRAELVDIASQYESDNPDLECATNRPHINPKEWQDLVLDSKFTICPAGRNPGTFRLWEALEGGSIPIVSKLDFTQPALGALSTQTCGDGDVAWNIVAASPFVEAVSVNDWHELPALLDRLRQEPDDYINKLQEDCVAWHASAMTQTYTSVLNFGEGHDLFPQDGPL 428
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BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Match: D7FHD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD8_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 2.050e-50
Identity = 94/189 (49.74%), Postives = 125/189 (66.14%), Query Frame = 1 
Query:  358 DTSPRRSRLVELTSKFRTDHPEFNAFVNEYA-LGPVHYRKMLLDTSFTICPGGHNPETFRMFESLEAGSIPIVSRRDYLYPSYKAPF---PCGKGDATWNTVAASPFAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMRRAYLSVLNFGQGYEMWPQDGPIVLDGFPVPSKPYPHTPG 912
            +TS RR+RL E+ S ++  H +   + +    L    +R +LL + FT+ PGGHNPETFR FE+LE GSIPI+S+ DY  P++        CG GDA WNTVAASPFA+AVSV +W++LP+LL +L   P  +LD+LQAD  AWY+ALM R Y S+L+FG G ++WPQ GPI+ D        Y  TPG
Sbjct:  171 ETSSRRARLAEVVSDYQALHADLEIYASTAPDLNASQWRDLLLRSRFTVSPGGHNPETFRTFEALEGGSIPIISKSDYTDPAFHKEIRVEACGTGDAAWNTVAASPFARAVSVDTWEDLPELLDRLHAEPDSFLDRLQADCGAWYDALMNRTYASLLDFGDGLDLWPQAGPILAD--------YRKTPG 351
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BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Match: A0A7S2SIR8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIR8_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.220e-15
Identity = 71/222 (31.98%), Postives = 106/222 (47.75%), Query Frame = 1 
Query:  253 YVPLGPRDTFPFVDASERSTRPSERSIFFNVAVRNDTSPRRSRL--------------VELTSKFRTDHPEFNAFVN---------------EYALGPVHYRKMLLDTSFTICPGGHNPETFRMFESLEAGSIPIV----SRRDYLYPSYKAPFPCGKGDATWNTV--AASPFAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMRRAYLSV 813
            Y+PLGPR  F  V A +   +P +R   FN+ V  +T+  R+RL               E+ S   T  P    F++               + A+   HYR++LLD+ FT+CP GHNPET+R+FE+ EAGSIPIV    S  D L P              W     + +PF   + V  W  + ++L +L+ + P  + +LQ+D  +WY + M  A  +V
Sbjct:  296 YLPLGPRSEFQAVKAQDVK-QPPKRQYLFNMMVTLETNHNRTRLHWAVMRLKWADPGIEEVKSSSSTLPPITACFIHNAKRWSGSLPSEVSKDKAMPAGHYREVLLDSVFTLCPNGHNPETYRLFEAAEAGSIPIVEETLSSGDCLNP--------------WRPFKDSGAPF---IWVTDWSTIGEVLKELR-ADPSRVQRLQSDLRSWYVSFMTTAITNV 498
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BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Match: A0A2R5GRG6_9STRA (UDP-D-xylose:ribitol-5-phosphate beta1,4-xylosyltransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRG6_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.680e-15
Identity = 68/192 (35.42%), Postives = 102/192 (53.12%), Query Frame = 1 
Query:  253 YVPLGPRDTFPFVDASE-RSTRPSERSIFFNVAVRNDTSPRRSRLVELTSKFRTDHPEFNAFVNEYA---------LGPVHYRKMLLDTSFTICPGGHNPETFRMFESLEAGSIPIVSRRDYLYPSYKAPFPCGKGDATWNTVAASPFAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMRR 798
            Y+PLGPR+ F  V A++ R  R  ER   FN  + + TS  R  LV+        +P F   V+++          + PV Y+++L+D+ FT+CP GHNPE +R++E+ EAGSIPIV   +Y Y S++      +G         +PF   V + SW ELP  L  +   P E + Q+Q D++ WY   M +
Sbjct:  371 YLPLGPREEFKRVYANDVRLVR--ERKYKFNF-MGSLTSLSRKVLVKELGPSSEKYPSFVWVVSKWKKQLTRANGYITPVEYKQILVDSVFTLCPQGHNPEAYRIYEACEAGSIPIVVLDEY-YRSHEC-----EGAFLPLITQGAPF---VFLNSWTELPAYLEYILQHP-ERIQQMQMDTMEWYSKFMTK 549
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BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Match: A0A7S1XCJ4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCJ4_9RHOD)

HSP 1 Score: 84.7 bits (208), Expect = 8.180e-14
Identity = 66/212 (31.13%), Postives = 104/212 (49.06%), Query Frame = 1 
Query:  238 ETRHAYVPLGPR----DTFPFVDASERSTRP-SERSIFFNVAVRNDTSPRRSRLVELTSKFRTDH----------PEFNAFVNEYALGPVHYRKMLLDTSFTICPGGHNPETFRMFESLEAGSIPIVSRRDYLYPSYKAPFPCGKGDATWNTVAASPFAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMR---RAYLSVLN 819
            + + AY+PLGPR      F  + A++R+  P S+R+I +N      TS  R +L EL +                 E++  ++E  +GP  Y   L+DT FT+ P GH+PE +RMFE++EAGSIP+++  D  Y  +K        D+    +     A  V V  W  L  + ++   S  + LD+ Q +   WY   M    RA+ SV++
Sbjct:  199 KVQAAYIPLGPRLDFWAAFANMSAAKRTILPPSKRNIIYNAIFSKSTSESRKQLAELLNSSEAFPYSSRAVLKIADEWSQQLSEEHMGPAEYAATLMDTIFTLSPTGHHPECYRMFEAIEAGSIPVIAL-DEEYRRHKC------SDSL--RIMRMTGAPIVFVSDWRHL-FVTMRYLLSDLKSLDRRQGELTKWYNRFMSGRVRAFESVVS 400
[Close]
BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Match: A0A2R5G5S0_9STRA (UDP-D-xylose:ribitol-5-phosphate beta1,4-xylosyltransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S0_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.370e-12
Identity = 59/195 (30.26%), Postives = 93/195 (47.69%), Query Frame = 1 
Query:  253 YVPLGPRDTFPFVDASERSTRPSERSIFFNVAVRNDTSPRRSRLVELTSKFRTDHPEFNAF-------------VNEYALGPVHYRKMLLDTSFTICPGGHNPETFRMFESLEAGSIPIVSRRDYLYPSYKAPFPCGKGDATWNTVAASPFAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMRR 798
            Y PLGPR  F  VD +       +R    N      + PRR       S+  T +P   +              V +  + P  YR++LLD+ FT+CP GHNPE +R++E+ EAGS+P++  ++  Y ++K    C           A PF   V + SW++LP LL ++ +S   ++++ Q    AWY   M +
Sbjct:  300 YFPLGPRAEFERVDQTTGVPAARKRQYAINFVGSPTSIPRRKLRDYFQSETWTMNPLAKSSYIHVTDTWTQTVSVEKGYITPKQYREVLLDSKFTLCPMGHNPEAYRIYEACEAGSVPVLVTKEEEYVNHK----CSNAFQPLLDSGA-PF---VILDSWNDLPQLL-EIIHSNQTFVEEKQRAVRAWYAEYMSK 485
[Close]
BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Match: A0A7S1XDT6_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDT6_9RHOD)

HSP 1 Score: 79.3 bits (194), Expect = 5.590e-12
Identity = 64/203 (31.53%), Postives = 92/203 (45.32%), Query Frame = 1 
Query:  253 YVPLGPRDTFPFVDASERST---RPSERSIFFNVAVRNDTSPRRSRLVELTSK------FRTDHPEFNAFVNEYA------LGPVH-----YRKMLLDTSFTICPGGHNPETFRMFESLEAGSIPIVSRRDYLYPSYKAPFPCGKGDATWN-TVAASPFAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMRR 798
            YVPLGPR  F         T   RP +R    N     DTS  R  L  +  K        T     N  +   A      LG  H     Y K+L ++ FT+ P GHNPE++R+FE++EAGSIP+++  D  Y S+        GD  W      SP    + +  W ++P +L +L ++P    ++ +A  V WY   M+R
Sbjct:  227 YVPLGPRADFAAAFRGMELTELKRPLDRRYIVNAIYSEDTSQSRKELTRILEKDADFLKLITSSTGSNRALIRIAKVWTQRLGGDHLSSDQYAKVLAESMFTLSPVGHNPESYRIFEAIEAGSIPVIAL-DQAYLSHAC------GDPLWRYRETGSPI---IFIDRWQDIPRVLRELISNPAALANRQEA-VVKWYREFMKR 418
[Close]
BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Match: A0A7S2KHJ8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KHJ8_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 8.400e-12
Identity = 70/200 (35.00%), Postives = 94/200 (47.00%), Query Frame = 1 
Query:  253 YVPLGPR----DTFPFVDASERST--RPSERSIFFNVAVRNDTSPRRSRLVELT-------SKFR----TDHPEFNAFVNEYALGPVHYRKMLLDTSFTICPGGHNPETFRMFESLEAGSIPIVSRRDYLYPSYKAPFPCGKGDATWNTVAASPFAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMRRA 801
            Y+PLGPR    D +  +     S     S+R   FN      T   RS L ++        S F     T  P+ N   N+  L    Y K+LL+++FT+ P GHNPE FR++E++EAGSIP++S  D  Y  +K    C    + W     SP    V V SW+E    + KL   P E LD+ QAD   WY   M  A
Sbjct:  842 YLPLGPRKDSWDAYQMLMNQNGSVIAASSQRKYAFNAIFTKSTHAGRSILADVLQMDGNSLSSFEQITDTWQPDPNKNSNDL-LDSKSYMKVLLESTFTLAPAGHNPECFRLYEAVEAGSIPVISL-DKDYKQHK----CKDSLSHW---LDSPI---VIVESWNEAIPTMQKLLEEP-EALDKRQADLHVWYNQYMSSA 1028
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig961.20329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K309_9PHAE3.730e-6350.64Exostosin domain-containing protein n=1 Tax=Ectoca... [more]
D7G272_ECTSI7.330e-6250.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G273_ECTSI3.630e-6150.00Transmembrane protein 5 n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHD8_ECTSI2.050e-5049.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SIR8_9STRA1.220e-1531.98Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2R5GRG6_9STRA1.680e-1535.42UDP-D-xylose:ribitol-5-phosphate beta1,4-xylosyltr... [more]
A0A7S1XCJ4_9RHOD8.180e-1431.13Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2R5G5S0_9STRA3.370e-1230.26UDP-D-xylose:ribitol-5-phosphate beta1,4-xylosyltr... [more]
A0A7S1XDT6_9RHOD5.590e-1231.53Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A7S2KHJ8_9STRA8.400e-1235.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig961contigD-dichotoma_M_contig961:73660..81102 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score65.5
Seed ortholog evalue4e-08
Seed eggNOG ortholog81824.XP_001744677.1
Preferred nameTMEM5
KEGG koko:K21052
KEGG Pathwayko00515,ko01100,map00515,map01100
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005794,GO:0005886,GO:0005887,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016763,GO:0019538,GO:0031224,GO:0031226,GO:0031974,GO:0031981,GO:0034645,GO:0035252,GO:0035268,GO:0035269,GO:0036211,GO:0042285,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0070013,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:0120053,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Transmembrane protein 5
EggNOG OGs28KM0@1,2QT2E@2759,39073@33154
COG Functional cat.S
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Exons4
Model size1962
Cds size720
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig961.20329.1prot_D-dichotoma_M_contig961.20329.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig961 74689..80889 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931222.080564-UTR-D-dichotoma_M_contig961:73659..746881622931222.080564-UTR-D-dichotoma_M_contig961:73659..74688Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig961 73660..74688 -
1690799672.6474137-UTR-D-dichotoma_M_contig961:73659..746881690799672.6474137-UTR-D-dichotoma_M_contig961:73659..74688Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig961 73660..74688 -
1622931222.1641166-UTR-D-dichotoma_M_contig961:80889..811021622931222.1641166-UTR-D-dichotoma_M_contig961:80889..81102Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig961 80890..81102 -
1690799672.7144625-UTR-D-dichotoma_M_contig961:80889..811021690799672.7144625-UTR-D-dichotoma_M_contig961:80889..81102Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig961 80890..81102 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931222.0994008-CDS-D-dichotoma_M_contig961:74688..748621622931222.0994008-CDS-D-dichotoma_M_contig961:74688..74862Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig961 74689..74862 -
1690799672.6595762-CDS-D-dichotoma_M_contig961:74688..748621690799672.6595762-CDS-D-dichotoma_M_contig961:74688..74862Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig961 74689..74862 -
1622931222.1160698-CDS-D-dichotoma_M_contig961:78510..787121622931222.1160698-CDS-D-dichotoma_M_contig961:78510..78712Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig961 78511..78712 -
1690799672.6695044-CDS-D-dichotoma_M_contig961:78510..787121690799672.6695044-CDS-D-dichotoma_M_contig961:78510..78712Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig961 78511..78712 -
1622931222.133392-CDS-D-dichotoma_M_contig961:80234..804431622931222.133392-CDS-D-dichotoma_M_contig961:80234..80443Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig961 80235..80443 -
1690799672.6837366-CDS-D-dichotoma_M_contig961:80234..804431690799672.6837366-CDS-D-dichotoma_M_contig961:80234..80443Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig961 80235..80443 -
1622931222.1494145-CDS-D-dichotoma_M_contig961:80754..808891622931222.1494145-CDS-D-dichotoma_M_contig961:80754..80889Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig961 80755..80889 -
1690799672.700949-CDS-D-dichotoma_M_contig961:80754..808891690799672.700949-CDS-D-dichotoma_M_contig961:80754..80889Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig961 80755..80889 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig961.20329.1

>prot_D-dichotoma_M_contig961.20329.1 ID=prot_D-dichotoma_M_contig961.20329.1|Name=mRNA_D-dichotoma_M_contig961.20329.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=240bp
MLCCSPSTETRHAYVPLGPRDTFPFVDASERSTRPSERSIFFNVAVRNDT
SPRRSRLVELTSKFRTDHPEFNAFVNEYALGPVHYRKMLLDTSFTICPGG
HNPETFRMFESLEAGSIPIVSRRDYLYPSYKAPFPCGKGDATWNTVAASP
FAQAVSVGSWDELPDLLLKLKNSPPEYLDQLQADSVAWYEALMRRAYLSV
LNFGQGYEMWPQDGPIVLDGFPVPSKPYPHTPGYDPEEL*
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mRNA from alignment at D-dichotoma_M_contig961:73660..81102-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig961.20329.1 ID=mRNA_D-dichotoma_M_contig961.20329.1|Name=mRNA_D-dichotoma_M_contig961.20329.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=7443bp|location=Sequence derived from alignment at D-dichotoma_M_contig961:73660..81102- (Dictyota dichotoma ODC1387m male)
GGTCCTCGACTGCACTCCCACCACTTGGCTATAGGCTATTGGCTAATGGA
TAATATATAGTGGATAATGGGCGATGAAGCCAACCGAGATCTAAAGAAGA
AGTGGAACTCAATTTGTTTCCCTCAAGCTGACTTCTGACAAGCTGATCCA
TGTCGCTGTGGCTGATGCTTTCAATGGGTTGCGGGCTGGTGGATGTCGGC
GCATGTAATGTGAATGTTATGTTGCAGCCCTTCAACGGAAACAAGACACG
CCTATGTGCCCTTGGGCCCGAGAGATACATTTCCTTTCGTCGATGCTTCG
GAGCGATCTACTAGACCGTCGGAAAGGTCCATCTTCTTCAACGTTGCGGT
GAGTTAGTTGAAAGGGTTATACTATTTGGATTGTTCTTTCAGTACCAACA
GTACCTACAGTACCTACCGCTGGCAAACGTGCTGCAGGAAACATGGCGCG
CCCCTGTTTGCGCCCCGCCTCTCTTGCGCGTCTGTTTGAAGCCGACGCCA
TGTGATGCATCTAGCGCCCGGCCGGCTCTCAAGCGATATGTGGCAGTCCT
AGTCGATTGTAGGTACCCTGAAGCAAGCAAGCGTCGACGGTACGTACAGT
ACCTCTAACCCTAAGCCCTTTACCAAGTTTATGGAAGTCTGATGCACGCG
CGCTCGCAGGTGAGGAACGACACTTCCCCACGTAGGTCCCGGCTTGTGGA
GCTCACGTCAAAGTTCAGGACGGATCATCCGGAGTTCAACGCCTTCGTGA
ACGAATACGCACTTGGGCCGGTGCATTATCGGAAGATGCTGCTCGATACC
TCCTTCACTATCTGTCCTGGAGGGCATAACCCGGAGACGTTCCGCATGTT
CGAAAGTCTCGAGGCAGGGTACGTGAACGAAAGTCGAGCCGAGTCGAATG
AATACATGTTCATGCGTTCGCTCGGCTTCCCGTTATGGCTTCGCTTCGCG
TCTCGCGTCTCGATCGGAACTCCTAAATGATGCCTACATGATCCGACGGA
GGTCTTGTCTCTCCATGACGTGTCTTGTTCGAACCCTACACGCACAAGAT
CAAAAATGTATAGTATTCGTATCACTTCTCCCTTCGAAGGAGGGATGGAA
TCATGTACCATAGCATCCGCAACGATGTAATCTGAGGTCGCCGTTGGCGA
TAGTATTAGCCCCCCCCCCATCAGGGACCTAAAAGAAACGAAGCTCCCTG
CGAGGATTTTTTCTCCACCCTCATCAGCACTCCAGCTCTTGAGCACATGA
AAGGGTGCTATTTTCCCCGTTTTTTGGCTGCATGCCCTTCTCCGCAAGCA
GGGCGCTTTCATGTGCTGAAGAAGAGCGTGAGCCTTCACGGCTGCGTTTC
GCCCGTAGGTATCGTAGAGCCCTCTCGCATGTCATGTCATGGTATGGTCA
TGATATGGTCATGATATGGTCATGGTATACCTAACCCCTGACCCTTTGAA
GGATGCATCCCTCCTTCTGTATGCCATGCCATGCCATGCCATGTCTACTG
CAGATTTTCAAGTTTTCTAGTCTAAGAGGGATGCAAAGAGTACGTGGGTA
GTAGCCTATTTCACATTCAAGACGTAATATATTTTACAACCAGAGAGTTG
AGACGGAAGGAAGCTGACAACGAGGCAATTCTAGGGCGCGCAATCCCGGC
CGTAGCACTAGAAGCACTAGAAGTAACAACACTAGAAGTAACAAGAGCAG
TTGGAGTAGGAGTAGGAGTAGGAGTAGCATGCCATTTTCGGATAGTCACG
CCCCCGCTCAAGACTAGAGAAGCGTAGTGATGGTATTAATAGCGGGATGT
ACGTGCATTCATCTGATGAACGTGCAGTAGTGACGGTAAACAGTCTTTTC
AGGCGCGGGCACCTTTAAATTCAGATTCTGCAAACATGGCGGAATTGACT
TACTGTATTGACTTACTGCTGTATTTTGCTGTGGGTTTGGTCCAAATACT
GAAGACTATCCGTAGCCGCTGGTGCTGGTGCTGGTGCATGGTAGTCTTCG
ACACATGTAACTTTCACTAACCAGCTCGCTATGAATCTCTATTAATAGGT
GACCAATTTAGCGAGAAATTGATACTGCATAACAAGTTGCAAGACTCGAG
CAGTTCCAGCCCGTACCCATGTGAGGTCATCCAAGCAGTCACGTGTTGAC
CACAACCTCACGAACTAGAGACCTCACAAGGGAACCTGGAAGATCTAGCA
AAACAGCCTCGGTCTTGGTTTCTGTTCTCGTCTGACATCCTAAAACAGTC
CAGTCCAGTCCACAGGATGCCAAGATTTCTCGATTTTCGTAAGCACCTCA
ATCGGTAAGTGTCAACACGTTTTTATTTTTGTGTGCTCCTTCCCTTGCCT
GTTCGATCCGGTTCTGTTCTGTCCGCACTGGTGACCTCAGATCCATCCCG
ATTGTGTCACGAAGGGATTATCTGTACCCATCGTACAAGGCCCCGTTCCC
ATGCGGGAAAGGGGACGCTACCTGGAATACAGTGGCTGCCTCTCCGTTCG
CCCAGGCTGTTTCTGTTGGAAGCTGGGATGAGCTCCCGGACTTGCTGCTA
AAGCTCAAGAATTCCCCGCCGGAGTATCTCGACCAATTGCAGGTGGGCGT
TGAATTTGTCTCCCTGTGAGCAATGGCTATCAAATCTATCCATTGCTGAT
CTCTTCACTGCTATCTATCCATCACTACGGTATCCATCCACTGCTCTGAA
AAGTTCTGATTATGATGGTACCCGTTCTTGTATGTCGACCACACCACAAG
CACATGTCGACCGCTTGCAAGGAAGATGGGATAGAGGAAAGGCACAGGGT
GAAAAATGCTACATTTAGGAGAGGGCTAAAGGAACAGGGACAGGAAAGGG
AAAGGGAAAGGGCAACGTGTGAATTTGAGATGAAATGATGACTACAGCAA
TACTACAGGATCACTGAAACACTGAAAATATGTATACATAACCTACATAA
GTAGAAGGCATTCAGATGATGAGCGTGCGTTTTTTTTTCACGCCTCGGAC
GAAGGTGCTCGAAGGTTCGACCCGTTGCGACCGTTGAACGGTCGATCGGC
GGCAAAGGCAAAGGTTCACGAATCTTTGATCCCTGGGAGGTGTTTGGAGG
TTTGAAGGTTCGAAGGTCCTTTGTTGACGTCCATGGTCCTTGGTCGAGGT
TTCGAAGGTCCTTTACTCTTTCACCCTTTTGCGAAATCATTGCGACGTGA
ATTGCAGAGGGGTGAGTATCGGCCACCTTGTACGTGTCTCAAATGTCTCA
AATGCTGCTCGCTCTATAGCAGCATCATAACCCTACCTGAAGTATGTAAC
CCAAAAAACGGTACTTCTCTGAAACTGCACTGGCGTTAGTTCACGCAACC
GTGAGGGTACAGTCGACTGTACGGTTATGTGGCGGTGAAGAAGTGGGATA
CAGTCGACCCCTCAGATGAGGGTAAGGCACCCGCCCATCGTGGTGATGGT
GGCCTTCATCTGACCAAGGAGCGGCCCTGTATTTTCCATTCTTAAACTCA
CACCTTTGCGGTTGCCTTAATTTAATCTAATCTAAGGGGAGGCCGACCCT
ATTCATGATTAGGACGCCTTAATCTAGGGGTCGACTGTAGTATAATACGG
ACTCCCAGCTCAAAGATCCATGGTACCCCAATAAGATCAAATATGATGTC
GCTTCGAAAGTATATGGCTCAGATTCAGATGCAGATTGCTCCCAAGTCGT
TGCTATCGCGCCTCTGATCTAGAGTTGGACTCGGTTGTCACAAACATGTT
CAGCTTACGGGATGGTGTACAGTATGTCTACTCTATGTATCGTGGAAGTC
TCGCCCTACGGTGTAGATGCAGCACTTGCTGGTCTTCACAACCGCGCCGC
CGACTCGACTCGACTCGACTCGACTCGAGGGTACTGTACTGGTAGTTTTC
ATGGTGCTACAATAATAGAGTTCGTCCATAATAACAGAGTTAGTTCAAAA
GTCCATTGTCGGTTCTTCGCATCAAAGGTTCAAAAGTCTTGCAAAGAGTC
CCATCATTCTGAGGATGGAAGACTTCGACTTGTCCTCGTATATACGCGTA
GTACCTTGCGGTACTCTCGAAGGCTCTACCTCGCTGCTTCGAGATAGTTG
AACAGTATGTCATTAAGTTTTCCTTCACACCTTGGTCACACGAGGGAATA
CTTCCCTATGGCTGCTACCTCCTTTGCAGCCCTCAAATCAAACAGTCCGG
GAGTGAAGTTCCCCTTCGGCGGATCTCTTCCCAGAACGCTTTCTAGAGAC
CAAAATTGGACGTTCCCCCGTTCATCTCCGGAGCGCTTCCTACAGCCCAA
GAACTTCTCCTAGATCCTAAACCCTTCCTTGATCGGTAAGAAGAACGTTG
ACAGTATTCATTCCACCACATCACACAACCCCAAACCTACTGCAAAACTA
CTCTAGATACATCACAGATCTCTAGATGCATCGATCGATCGATCGATCTC
TATCTACAAGTCCTACATCAGCACTCCCACACACCACCGTAGCCTCATGG
CTGATATAGGACGTTTTAGAGAAGTAGTACTATTTTGTGCGGCACACTCA
GGTTTTAGGTACCATAGAAACGTTTGAGACAAGCGTTGATAATCACATTG
CATCCCTCTGAAATCCACATGTCTAGTCCACGTGTCCAGTGATGCAATGC
ATCAAAAGGGTGGGAGTTCATTAATAGCATCAAAAATTCGAAGGTTCTTC
GAAATTTCTTGAAAGCTTTTCAGCTGGTATAGTGAAGGTTCGAAGGGCCT
TTGAAGGTATGAAGCTCGACAGGATAAAGGTTCGAAGGTCCTTCGAAAGG
TTTAGCCTCGAGAGGATGCAAGTTCGAGGGTCGTTTATACCACGCTATAC
CCCGAGCAACGAATGTTGATAAATCGTTGATTCACTTCTCCCTGCCACGT
CGAAGGTTGTTAAAATCCTTGACACACTTCTCCTTTGCCACGACGAAGGT
TTCCAAATCTTCAACGCGTTATCTTACGGGTTTAAGCTTCGAAGGTCCTT
GAAATCGAACCTTCATTCGCGATGTGTGTGTGTGTGTGTTTTTTTTTTTT
TTTATTGTTTTCCGTACTAATTCAAAGGATTCCAAAATATAATACAGCAC
CAAGTACGTTGTCGACATGGAATCCTTTCGAATACAGTCAAGACGAATAT
CGCAACATCAAAACGTTTCATGATGGTTGTCCTCGAAATGCCTTACACGT
AGTAGACTGGTGGAGGACAACCAAAACTTTTACAGGACGAATCTGAAGGA
GTCATGGCTGGGGAGGGCGTAGACGAAAGACAGAAGGCGACAAGAGAATA
TCACGGATATGGAGTCGGTCTCTGAGTATATGTAGCATTGACAATCCGTA
GGTGATGTTCTGCAAGGTTATGCAAGGGGATGTTATGTAAGGTGATGTTC
TGCAAGGTGATGTTATGTAAGGTGATGTTATGTAAGGTGATGGCCGAGAG
CTGGGCAGTGAAACTGTAGATGTGGCGATGAGGCGATGAGCTCGGCGGAG
AAGATCGGTATGCTCGGTAACATTCTCGATCCGATCCGATCCGATGATAG
GTGTAGATTTGTCCTCGATCCGGTGATACGCTGGTTTTGCCCTCTAGTGT
GCAACCATTTGAAATACGATGACGCGTACTGAACTTCATGGAATCAATTT
CAAACTACGCACTCGTTCCCTGAAACAACTCTTGCGGGGTGACACCTGCA
TAACTAACCCTAGCCCTAGCCCTAACCGCTTGCTTGTGTATAGGTCCGCT
CTTGCCTTCACCGCGTGCTTGGGTATGGGTTTACAAATAGTTCGAACAGC
GTTCTGGCATTCTTGTGCTTCGTACACAAGCATCAAAATACTCCTGTATG
TATAGGTATGTAGATATTGAGGAGGCATGCATCTCTTCGTGATTGGTTTG
GTGTGACGAAAGTTCGACATGTAACCAATTCGATGGACATGATACGCCGA
AGAGCTCCGAAAGCGCTTTGGTAAGTTGCTAGAATGTGCACAGTAGATTG
CACTAAGAGGTATTCGCCCATCCAAAAATCGGGAAAAGCATGAAACCTTT
GATCGCACACAGCCAATCCATGGGCGACAAGGGTTCTCCTCGTTTCCCTC
AACACGTCGACATATGGTGATGGATACATGTACACATGAGGTCTACGCCG
TGCAGGTCGTGCAGGTGCAAGTCGGGCTAAAGCTAACCAACCGCGAACCG
TTCCTACCTATTTTTCTCCTTCCTTCCTTGGATATGTCAGGCGGATTCCG
TGGCCTGGTACGAAGCGCTAATGAGGCGCGCGTACCTAAGCGTGCTTAAC
TTCGGACAAGGCTACGAAATGTGGCCACAAGATGGTCCCATTGTGCTTGA
CGGCTTCCCGGTGCCCTCCAAGCCTTACCCCCACACGCCCGGGTACGACC
CGGAAGAACTTTAGTTGGTGCTTGGAATGATATCATGATGGCGGCAGGAA
GCTACTGTAGCACTCACAGGCAGGAGTGCTCGAGGTGATATCCCGACGGC
CCGGCCAGCTGGACTCTCGGGTTCTCCCCGTCGTGTCGTGTCGTATCGTA
TGGGATAGATAGTAATCCCTTTGGTATAAATTTGAAGGAAGCCTAGCTGG
CGTGGGTCGAAACATTGGTGCAACATGTCACCTACTGTACTTTAGTGAGG
ATTTCCACAATGGGAGGTTGAGACAAGGGGTGTCCAGGTTTTCGGAGTGC
AGCAGGATGTCACGATGGGCCTCTGGGTTGTGGGGCACTGCGTTTCTAGA
GCCACTGCGGCAGGGACTTCTATATACCCCAGGGTATTGCGAGTTTGTTC
ATGCCTTAGCTGGGTAATCTTCGCTTTGACAATTTTTCTGAACCGTTCAT
CAATACCTTTGATGAGAGCAACTTGCTGGAATGAATTTCAGCCGGAATGC
GGTTGGTTGCTGTGAAATCGTCGACGTCTCGAGATCAAGTTTCACCAACT
GCGTGGAGCACGGAATTCCAGGGACGTTGATATTTGTTGCTAGTACTGTA
TATGGAAACTACAAAGGCAGGGGAAGGCAGGGGAGTGCATCACCGACCTG
CGGTGTAAAGAATCCACGACTGCATGGGTATTGGAATCGGTCAAGCTGTA
TGACACTCCCAGATACGGTCATGGTGCTCCCCTCTCAATGACTTGGGTTG
GGAAGGTGAAGATTCTCAAAATTCTCAGTCAGTATGTCGTTGTGTACATA
GAGTCCATGTGGCTCAAGATACGACATGCGACACATACGAGATGCGATCG
AGATACGATAGCTTTAGGAACAACTTTTGTGGGTCATGATTTGAGCTTAC
CCGAGTATTGCACGACGTGGAAGATCCGCGCTCTGGTCGGTGCTAGGGTC
GAGCTTTGTGATTTTATGACTCACAAGACGTGAAGGGTAGCTATTGTAGG
TAGCGAGCCCTGTGAAGCTGTAGTGAAATAGAGGAAGGTCAAC
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig961:73660..81102-

>mRNA_D-dichotoma_M_contig961.20329.1 ID=mRNA_D-dichotoma_M_contig961.20329.1|Name=mRNA_D-dichotoma_M_contig961.20329.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1440bp|location=Sequence derived from alignment at D-dichotoma_M_contig961:73660..81102- (Dictyota dichotoma ODC1387m male)
ATGTTATGTTGCAGCCCTTCAACGGAAACAAGACACGCCTATGTGCCCTT
GGGCCCGAGAGATACATTTCCTTTCGTCGATGCTTCGGAGCGATCTACTA
GACCGTCGGAAAGGTCCATCTTCTTCAACGTTGCGATGTTATGTTGCAGC
CCTTCAACGGAAACAAGACACGCCTATGTGCCCTTGGGCCCGAGAGATAC
ATTTCCTTTCGTCGATGCTTCGGAGCGATCTACTAGACCGTCGGAAAGGT
CCATCTTCTTCAACGTTGCGGTGAGGAACGACACTTCCCCACGTAGGTCC
CGGCTTGTGGAGCTCACGTCAAAGTTCAGGACGGATCATCCGGAGTTCAA
CGCCTTCGTGAACGAATACGCACTTGGGCCGGTGCATTATCGGAAGATGC
TGCTCGATACCTCCTTCACTATCTGTCCTGGAGGGCATAACCCGGAGACG
TTCCGCATGTTCGAAAGTCTCGAGGCAGGGTGAGGAACGACACTTCCCCA
CGTAGGTCCCGGCTTGTGGAGCTCACGTCAAAGTTCAGGACGGATCATCC
GGAGTTCAACGCCTTCGTGAACGAATACGCACTTGGGCCGGTGCATTATC
GGAAGATGCTGCTCGATACCTCCTTCACTATCTGTCCTGGAGGGCATAAC
CCGGAGACGTTCCGCATGTTCGAAAGTCTCGAGGCAGGATCCATCCCGAT
TGTGTCACGAAGGGATTATCTGTACCCATCGTACAAGGCCCCGTTCCCAT
GCGGGAAAGGGGACGCTACCTGGAATACAGTGGCTGCCTCTCCGTTCGCC
CAGGCTGTTTCTGTTGGAAGCTGGGATGAGCTCCCGGACTTGCTGCTAAA
GCTCAAGAATTCCCCGCCGGAGTATCTCGACCAATTGCAGATCCATCCCG
ATTGTGTCACGAAGGGATTATCTGTACCCATCGTACAAGGCCCCGTTCCC
ATGCGGGAAAGGGGACGCTACCTGGAATACAGTGGCTGCCTCTCCGTTCG
CCCAGGCTGTTTCTGTTGGAAGCTGGGATGAGCTCCCGGACTTGCTGCTA
AAGCTCAAGAATTCCCCGCCGGAGTATCTCGACCAATTGCAGGCGGATTC
CGTGGCCTGGTACGAAGCGCTAATGAGGCGCGCGTACCTAAGCGTGCTTA
ACTTCGGACAAGGCTACGAAATGTGGCCACAAGATGGTCCCATTGTGCTT
GACGGCTTCCCGGTGCCCTCCAAGCCTTACCCCCACACGCCCGGGTACGA
CCCGGAAGAACTTTAGGCGGATTCCGTGGCCTGGTACGAAGCGCTAATGA
GGCGCGCGTACCTAAGCGTGCTTAACTTCGGACAAGGCTACGAAATGTGG
CCACAAGATGGTCCCATTGTGCTTGACGGCTTCCCGGTGCCCTCCAAGCC
TTACCCCCACACGCCCGGGTACGACCCGGAAGAACTTTAG
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