mRNA_D-dichotoma_M_contig959.20295.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig959.20295.1
Unique NamemRNA_D-dichotoma_M_contig959.20295.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
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BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Match: D7G8S5_ECTSI (V-type proton ATPase proteolipid subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S5_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 1.940e-59
Identity = 126/139 (90.65%), Postives = 130/139 (93.53%), Query Frame = 3 
Query:  852 HIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTAEGNTFSSYSGYAFLAAGLACGLSGLXXXXXXXXVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 1268
            +IGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSG+I  P+  GNTFSS+SGYAFLAAGL CGLSG XXXXXXXX  DAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQ SYSC
Sbjct:   24 NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGAIGMPSDTGNTFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQQSYSC 162
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BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Match: A0A835Z1C3_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C3_9STRA)

HSP 1 Score: 201 bits (512), Expect = 2.500e-56
Identity = 124/141 (87.94%), Postives = 129/141 (91.49%), Query Frame = 3 
Query:  849 THIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTAEGNT-FSSYSGYAFLAAGLACGLSGLXXXXXXXXVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 1268
            ++IGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIL GSI+ P  E NT FSS+SGYAFLAAGL CGLSG XXXXXXXX  DAGVRAVGQQERLFVGMILILIFAEAL LYG+IVALILSQ SYSC
Sbjct:   27 SNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC 167
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BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Match: A0A7S3GT47_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT47_9STRA)

HSP 1 Score: 196 bits (497), Expect = 3.450e-54
Identity = 117/140 (83.57%), Postives = 132/140 (94.29%), Query Frame = 3 
Query:  852 HIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTAEGNT-FSSYSGYAFLAAGLACGLSGLXXXXXXXXVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 1268
            +IGAAYGTAKSGVGI+SMGVM+PGLVM+NIIPVVMAGVLGIYGLIVAVI+ GSI+ P+A+G T +SS++GYA L+AGL CGLSGLXXXXXXXX GDAGVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ S+SC
Sbjct:   30 NIGAAYGTAKSGVGIASMGVMHPGLVMKNIIPVVMAGVLGIYGLIVAVIIQGSITVPSADGATKYSSFTGYAHLSAGLCCGLSGLXXXXXXXXXGDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQSFSC 169
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BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Match: F0YK80_AURAN (V-type proton ATPase proteolipid subunit n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YK80_AURAN)

HSP 1 Score: 189 bits (480), Expect = 7.260e-52
Identity = 119/142 (83.80%), Postives = 127/142 (89.44%), Query Frame = 3 
Query:  852 HIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTA-EGNT--FSSYSGYAFLAAGLACGLSGLXXXXXXXXVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 1268
            +IGAAYGTAKSGVGI+SMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIL G+I+ P A  G T  FSS+SGYA+LAAGL CGLSG XXXXXXXX  DAGVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ S  C
Sbjct:   30 NIGAAYGTAKSGVGIASMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGAITKPDAGSGGTTKFSSFSGYAYLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQSADC 171
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BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Match: A0A835YJ26_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ26_9STRA)

HSP 1 Score: 186 bits (472), Expect = 7.970e-51
Identity = 112/138 (81.16%), Postives = 126/138 (91.30%), Query Frame = 3 
Query:  858 GAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTAEG-NTFSSYSGYAFLAAGLACGLSGLXXXXXXXXVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 1268
            GAAYGTAK+G+GI+SMGVM+PG+VMRNIIPVVMAGVLGIYGLIV+VIL G+I+  T  G  T+S++SG+A LAAGL CG+SGLXXXXXXX VGDAGVRAVGQQERLFVGMILILIFAEAL LYG+IVALILSQ SYSC
Sbjct:   29 GAAYGTAKAGLGIASMGVMHPGMVMRNIIPVVMAGVLGIYGLIVSVILLGTITGTTPTGVTTYSTFSGFAHLAAGLCCGMSGLXXXXXXXIVGDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC 166
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BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Match: A0A7S2RWN8_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWN8_9STRA)

HSP 1 Score: 186 bits (471), Expect = 9.600e-51
Identity = 113/139 (81.29%), Postives = 124/139 (89.21%), Query Frame = 3 
Query:  852 HIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTAEGNTFSSYSGYAFLAAGLACGLSGLXXXXXXXXVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 1268
            +IGAAYGTAKSGVGI+SMGVM P LVMRNIIPV+MAGVLGIYGLIVAVIL+GSI+ P    + FSS+SG+AFLAAGL CGLSG XXXXXXXX   AGVRAVGQQE+LFVG+ILILIFAEALGLYG+IVALILSQ S SC
Sbjct:   26 NIGAAYGTAKSGVGIASMGVMKPNLVMRNIIPVIMAGVLGIYGLIVAVILNGSITKPANNESKFSSFSGFAFLAAGLCCGLSGXXXXXXXXXXXXAGVRAVGQQEKLFVGVILILIFAEALGLYGLIVALILSQQSVSC 164
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BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Match: A0A7S2GLL8_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLL8_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.980e-49
Identity = 111/139 (79.86%), Postives = 120/139 (86.33%), Query Frame = 3 
Query:  852 HIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTAEGNTFSSYSGYAFLAAGLACGLSGLXXXXXXXXVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 1268
            +IGAAYGTAKSG+GI+SMGVM P LVMRNIIPV+MAGVLGIYGLIVAVIL GSI+ PT     FSSYSG+AFLAAGL CGLSG XXXXXXXX    GVRAVGQQE+LFVG+ILILIFAEALGLYG+IVALILS   Y C
Sbjct:   33 NIGAAYGTAKSGIGIASMGVMKPELVMRNIIPVIMAGVLGIYGLIVAVILQGSITKPTEGVTKFSSYSGFAFLAAGLCCGLSGXXXXXXXXXXXXXGVRAVGQQEKLFVGVILILIFAEALGLYGLIVALILSMQIYEC 171
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BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Match: A0A4D9DE12_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DE12_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.150e-48
Identity = 107/143 (74.83%), Postives = 126/143 (88.11%), Query Frame = 3 
Query:  852 HIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTAEGNT----FSSYSGYAFLAAGLACGLSGLXXXXXXXXVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC 1268
            ++G+AYGTAKSGVGISSMGVMNPGLVMRN+IPVV+AG+LGIYGLIV+VI++G+I+ P + G+T    +S YSG+A LAAGLACG    XXXXXXX VGDAGVRAVGQQERLFVGM+LILIFAEALGLYG+IV+LILSQ +  C
Sbjct:   32 NLGSAYGTAKSGVGISSMGVMNPGLVMRNVIPVVLAGILGIYGLIVSVIITGNIAAPASVGDTLQTKYSLYSGFAHLAAGLACGXXXXXXXXXXXVVGDAGVRAVGQQERLFVGMLLILIFAEALGLYGLIVSLILSQQNVYC 174
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BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Match: A0A7S3LI96_9STRA (V-type proton ATPase proteolipid subunit n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LI96_9STRA)

HSP 1 Score: 180 bits (457), Expect = 4.430e-48
Identity = 118/169 (69.82%), Postives = 135/169 (79.88%), Query Frame = 3 
Query:  774 VRRVEFVSILSAAGNYGPLRRTSA--HTHIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTAEGNTFSSYSGYAFLAAGLACGLSGLXXXXXXXXVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC*G 1274
            +  VE  +  ++A  +G +  TSA    +IGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVI+ GSI +P    + +S Y+G+A LAAGL CGL   XXXXXXXX    GVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ+S+ C G
Sbjct:   49 IMSVEMETCPASAPFFGFMGVTSALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSILSPQNGLSQYSLYTGFAHLAAGLCCGLXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSFVCEG 217
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BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Match: B8BTR9_THAPS (V-type proton ATPase proteolipid subunit n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8BTR9_THAPS)

HSP 1 Score: 177 bits (450), Expect = 7.540e-48
Identity = 111/141 (78.72%), Postives = 121/141 (85.82%), Query Frame = 3 
Query:  852 HIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTAEGNTFSSYSGYAFLAAGLACGLSGLXXXXXXXXVGDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQSSYSC*G 1274
            +IGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVI+ GSI  P    + +S Y+G+A LAAGL CGL   XXXXXXXX    GVRAVGQQE+LFVGMILILIFAEALGLYG+IVALILSQ+S+ C G
Sbjct:   24 NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSIVAPQNGLSQYSLYTGFAHLAAGLCCGLXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSFVCEG 164
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig959.20295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8S5_ECTSI1.940e-5990.65V-type proton ATPase proteolipid subunit n=1 Tax=E... [more]
A0A835Z1C3_9STRA2.500e-5687.94V-type proton ATPase proteolipid subunit n=1 Tax=T... [more]
A0A7S3GT47_9STRA3.450e-5483.57V-type proton ATPase proteolipid subunit n=1 Tax=S... [more]
F0YK80_AURAN7.260e-5283.80V-type proton ATPase proteolipid subunit n=2 Tax=P... [more]
A0A835YJ26_9STRA7.970e-5181.16V-type proton ATPase proteolipid subunit n=1 Tax=T... [more]
A0A7S2RWN8_9STRA9.600e-5181.29V-type proton ATPase proteolipid subunit n=1 Tax=R... [more]
A0A7S2GLL8_9STRA2.980e-4979.86V-type proton ATPase proteolipid subunit n=1 Tax=D... [more]
A0A4D9DE12_9STRA1.150e-4874.83V-type proton ATPase proteolipid subunit n=1 Tax=N... [more]
A0A7S3LI96_9STRA4.430e-4869.82V-type proton ATPase proteolipid subunit n=2 Tax=A... [more]
B8BTR9_THAPS7.540e-4878.72V-type proton ATPase proteolipid subunit n=19 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig959contigD-dichotoma_M_contig959:163800..169472 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score214.2
Seed ortholog evalue4.9e-53
Seed eggNOG ortholog2880.D7G8S5
Preferred nameATP6V0C
KEGG koko:K02155,ko:K04345,ko:K15542
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko01522,ko03015,ko04010,ko04014,ko04020,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04142,ko04145,ko04211,ko04213,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04721,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04966,ko04970,ko04971,ko04976,ko05012,ko05020,ko05030,ko05031,ko05032,ko05110,ko05120,ko05146,ko05152,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05323,ko05414,map00190,map01100,map01522,map03015,map04010,map04014,map04020,map04024,map04062,map04113,map04114,map04138,map04140,map04142,map04145,map04211,map04213,map04261,map04270,map04310,map04340,map04341,map04371,map04530,map04540,map04611,map04713,map04714,map04720,map04721,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04966,map04970,map04971,map04976,map05012,map05020,map05030,map05031,map05032,map05110,map05120,map05146,map05152,map05165,map05166,map05169,map05200,map05203,map05205,map05323,map05414
KEGG ModuleM00160,M00695
GOsGO:0000003,GO:0000041,GO:0000220,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000331,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0006403,GO:0006605,GO:0006623,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006826,GO:0006873,GO:0006875,GO:0006878,GO:0006879,GO:0006885,GO:0006886,GO:0006887,GO:0006897,GO:0006955,GO:0006996,GO:0007033,GO:0007034,GO:0007035,GO:0007040,GO:0007042,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007292,GO:0008104,GO:0008150,GO:0008286,GO:0008324,GO:0008553,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009894,GO:0009966,GO:0009967,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010506,GO:0010646,GO:0010647,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015682,GO:0015833,GO:0015931,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016241,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019725,GO:0019829,GO:0019899,GO:0019953,GO:0019954,GO:0022414,GO:0022603,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0030001,GO:0030003,GO:0030004,GO:0030111,GO:0030139,GO:0030141,GO:0030177,GO:0030587,GO:0030641,GO:0030659,GO:0030666,GO:0030667,GO:0030670,GO:0030728,GO:0031090,GO:0031164,GO:0031224,GO:0031323,GO:0031329,GO:0031410,GO:0031625,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032868,GO:0032869,GO:0032870,GO:0032940,GO:0032991,GO:0033036,GO:0033176,GO:0033177,GO:0033179,GO:0033181,GO:0033227,GO:0033365,GO:0033572,GO:0034220,GO:0034613,GO:0035577,GO:0035751,GO:0036230,GO:0036442,GO:0042119,GO:0042221,GO:0042582,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042886,GO:0043067,GO:0043068,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043434,GO:0043492,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044769,GO:0045055,GO:0045169,GO:0045184,GO:0045321,GO:0045335,GO:0045851,GO:0046903,GO:0046907,GO:0046916,GO:0046933,GO:0046961,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048609,GO:0048856,GO:0048878,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0051236,GO:0051452,GO:0051453,GO:0051641,GO:0051649,GO:0051703,GO:0051704,GO:0051716,GO:0055065,GO:0055067,GO:0055070,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060142,GO:0065007,GO:0065008,GO:0070727,GO:0070820,GO:0070821,GO:0070838,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072511,GO:0072512,GO:0072594,GO:0072665,GO:0072666,GO:0080171,GO:0090662,GO:0090702,GO:0097708,GO:0098588,GO:0098655,GO:0098657,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099120,GO:0099131,GO:0099132,GO:0099503,GO:0101002,GO:0101003,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902600
EggNOG free text desc.ATP hydrolysis coupled proton transport
EggNOG OGsCOG0636@1,KOG0232@2759
EC2.7.11.11
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionV-ATPase proteolipid subunit C-like domain
Ec32 orthologEc-22_002820.1
Exons4
Model size2862
Cds size516
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig959.20295.1prot_D-dichotoma_M_contig959.20295.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig959 164555..167881 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931214.115209-UTR-D-dichotoma_M_contig959:163799..1645541622931214.115209-UTR-D-dichotoma_M_contig959:163799..164554Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig959 163800..164554 +
1690799668.473638-UTR-D-dichotoma_M_contig959:163799..1645541690799668.473638-UTR-D-dichotoma_M_contig959:163799..164554Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig959 163800..164554 +
1622931214.2423673-UTR-D-dichotoma_M_contig959:167881..1694721622931214.2423673-UTR-D-dichotoma_M_contig959:167881..169472Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig959 167882..169472 +
1690799668.5247524-UTR-D-dichotoma_M_contig959:167881..1694721690799668.5247524-UTR-D-dichotoma_M_contig959:167881..169472Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig959 167882..169472 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931214.1292365-CDS-D-dichotoma_M_contig959:164554..1646511622931214.1292365-CDS-D-dichotoma_M_contig959:164554..164651Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig959 164555..164651 +
1690799668.485058-CDS-D-dichotoma_M_contig959:164554..1646511690799668.485058-CDS-D-dichotoma_M_contig959:164554..164651Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig959 164555..164651 +
1622931214.1976187-CDS-D-dichotoma_M_contig959:165809..1659681622931214.1976187-CDS-D-dichotoma_M_contig959:165809..165968Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig959 165810..165968 +
1690799668.4940379-CDS-D-dichotoma_M_contig959:165809..1659681690799668.4940379-CDS-D-dichotoma_M_contig959:165809..165968Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig959 165810..165968 +
1622931214.216015-CDS-D-dichotoma_M_contig959:166491..1665761622931214.216015-CDS-D-dichotoma_M_contig959:166491..166576Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig959 166492..166576 +
1690799668.5032797-CDS-D-dichotoma_M_contig959:166491..1665761690799668.5032797-CDS-D-dichotoma_M_contig959:166491..166576Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig959 166492..166576 +
1622931214.228345-CDS-D-dichotoma_M_contig959:167706..1678811622931214.228345-CDS-D-dichotoma_M_contig959:167706..167881Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig959 167707..167881 +
1690799668.5118656-CDS-D-dichotoma_M_contig959:167706..1678811690799668.5118656-CDS-D-dichotoma_M_contig959:167706..167881Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig959 167707..167881 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig959.20295.1

>prot_D-dichotoma_M_contig959.20295.1 ID=prot_D-dichotoma_M_contig959.20295.1|Name=mRNA_D-dichotoma_M_contig959.20295.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=172bp
MRERVGVRRVEFVSILSAAGNYGPLRRTSAHTHIGAAYGTAKSGVGISSM
GVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGSISTPTAEGNTFSSYS
GYAFLAAGLACGLSGLSAGMAIGIVGDAGVRAVGQQERLFVGMILILIFA
EALGLYGMIVALILSQSSYSC*
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mRNA from alignment at D-dichotoma_M_contig959:163800..169472+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig959.20295.1 ID=mRNA_D-dichotoma_M_contig959.20295.1|Name=mRNA_D-dichotoma_M_contig959.20295.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=5673bp|location=Sequence derived from alignment at D-dichotoma_M_contig959:163800..169472+ (Dictyota dichotoma ODC1387m male)
CCAACACGATGGGTCTGAATCCGCGAAGCCTTTACGTATGTCTTCAGAGA
CTCACCGTGTCTAGCTCTTCCTTGAGATTGTCTTGTCAACGACTGATTCA
TCCGAACCGTTCGTGTAGGCGACGCGCCGCAAATGCAGGCAAACCTGTGT
CGACTTATTTTTAGATTTAAGGTTGAGGAGCTCTGTGGCTGAAGTCCCTG
GGTCCTGATCACCATGTCGCGTGAGTCTGCCCATGTCTACTGATGTGTAC
TTGGACCTTTATGCTCTGGGATAGATGAGAGATGAAAGCCCATGGCATAT
TTCGCAGAATTCTTGCTCTATGGAATCCAATGCGCCACTACGCTTTGGCG
TGATGACGAAAGAAATTGCTTGGCTAGTTGTTCGTGAGGAAAGAAGCTAA
GGCGGATGATGCATCTGGACGTCTGCGGGTTCGCCATCCCGCTTTCTAGT
GTTGAAGAGGTCGCGGGTTGAACATAGTATTCGCTTTGTCCGTCGCGCGT
TCTTGATCCACACTATTCCTTCGCTGTTCGATTCTACGGAATGTATACTG
TTGTACGACGGCTCAACGTGAACGTGAATGCTCGGGCTCTCTTCTCTCTA
CGGATGTGACACGTTTTTGCGAAACGAGTAGAATCTAAACCAGCCGTCTT
TTAAGATTGTTTGGCGTTGGAACATTTCAGTTCTACATTACGATTTCTCC
ACATGGACCCGCATCCAAGACACTGTGCTGTGCCTGTTTGATAGCATCAT
CCTAGATGCGAGAAAGGGTTGGGGTGCGTCGTGTTGAATTTGTTTCGATT
CTCTCGGCAGCCGGGAACTACGGACCCCTTCGAAGGACTTCCGCACATAC
ACGTACGTGTTGCGCTTCTCCCCCAGCACCAACGGCCTTTTTCCTGTCTA
TGTTGGACATGGCGGGCTTCCTGCCTCCCAAACGCAGAAGGGGCGAATGC
CTACGTCGTGGTTTGTGTTGATGCGGAAGGTGTCGTTCCTTGGCCATGGA
GAATATAGTCGTATGCCCATTCGAACGCGTCATCGGTGTTCGTGGCGCTA
TCTGGAAGCTGATGGAGTTGGACTCGGCGACGGGGTGCTGATGTTGCGAG
ACACGTACTTGGGCTGCGCCGTGTGTGACAGGCTCTGTCGGGCAGTAGGT
CATGGATCCCATGTTGTTCGTATGGTGCGGACGCTTAATGGAGTCGCTCC
ACCCTTCGTCTGCCTGAAGGGAAACGGTTTCAATCACCATGCACGACGTT
CACTCCCTTGTAGCGAAGCCGTACAGAATTGTGGGGCGTCGAATTGTCGT
GGACGAATTCCACGTGTTTCACGGAAGAGAAGATGCGTGCACGAGCCATG
AACAACCCCATCGTTGCTGACTTTGGGCTTCTGGAGTATGAAGTTCGAGT
CAGAGCGCGCTCATCCCTGAGTTGATCGTCTACGTTTGTCCCTTGAACGT
CATTGCGGAAGGGGCACTAGGAAGAGACCCTGATACCTCCGGTGAACTGC
ACCACCGTCTTCGACCTCGGGCTCTTCACTGTAGTCTTTGGTGCTGGTGT
ATCTCGTACCTCCGTATTGCACATAGGTGGCGACGTAAGTCTTCGTGAGG
CTCTGATGTTGCGTTGAGCTATGTCCTAGAGGGTTGCATGTTGTGTGTCG
AAAGACGGCGGCATGTGTTGATCGAGAATTTGTGTCGAGCCTATTCAAAG
CTGGTTTATTGTTCGGGGGTGTTGTCGATGCAGCTTGCTGGAATTGCCTA
CGACAGTGCTTGTGAGTCCCCGTGGTCATCCACGAGCCATGTCGAGGGGA
GAAGGCTGGCGGACAAGGCGGAGTAGGATGAAAGATTGGTGCACTTGCTT
CGTTACCGCGAGCTTGACCCGCACACAGCTGAGTCTCTTGCAAGGGTTTT
GGTTGCTCTTGATTCATGCCCCCTCTGTCTCCCCACAAATGCGTCACTCG
CTTCCTGTGCCCCCGCAACGTGCTCGCTGTACCGTTCTGCGTTGTTTGTG
CTACGCTCAGACATCGGCGCCGCGTACGGAACCGCAAAGTCCGGCGTGGG
AATTTCGTCGATGGGTGTCATGAACCCGGGGCTCGTGATGCGTAACATCA
TCCCCGTGGTTATGGCTGGTGTGCTGGGTATCTACGGTCTCATCGTGGCG
GTTATCCTGTCGGGTTCAAGTGAGTCGGTTGGGATCGTTCATGCGGTCAA
TTCTTGCGAGCAGGATTTAGCTTAGCTTGCACAAGGCGCGATTTTGACAA
ACTAGGGGACGTCTTGAAATCGCGACACGAGGGCTTAACCCGCCCGGCGA
GATCGATTTGCTCAGGATCTCTGTAAGATGTCGCTTGATTGGAATGGGTG
CTTTTGACATAGTGGAGGTGTGCACTGGGCTCGGCAACAAGATGATCAAT
GCCGACAAAGTTGACGGCTGTGGAGTTCCTGTCAACAGTTTGCTGTCGCT
GAATGCTTGATACCTTGCGCTATATGAGTTTGTCTTAAGGTGGTTAGTCA
GCAGGGTTGTCAGGCGTGCCATCATGGATGAAAGTCGAGTGGGGACAGGT
TGGAGTATCGACGGGTCTGGTTAGGCCCAGGCAGTGTAGCTTCCGGAACC
CGGCGCCTCTTCTCGTGCAACCGTTTTTGGCTGTCTCCTGATGCAACGCT
TTTCCTTCCTCCCTCGTGTGGTTCGTTGGATCGGACGCCCAGTCTCCACC
CCAACCGCGGAAGGGAACACCTTCTCGTCTTATTCTGGGTACGCTTTCCT
TGCCGCGGGCCTGGCATGTGGCCTCAGGTCAGTTGTCTCCTCCGAGGTTG
GGTTGCACAGAGGAATTTGCATGAAGCTTGGGTTCTACTCGTCCTGGGTG
TGATCAGTGCACTGGTTCGGGCAAGCGAGCTCTTGGATGTGCCCGACTAG
TTCCAAGCGTTTCGGTCGACGAATGAAGATGGACGGTTTATGTTGCATTG
CAGGGCTGCTGTTGGTTCGTGGAGGGTGTGGTATCTCTGTGGAGTGCAAG
GAGGAGGATACAGTAGTGCTCATAGGTAGGGTGTAACGGAATTCGGGAGG
AAAAAATAAGTCTAAATTCGGCCCTTAAAAATGTGGCCAATTTTTTGGGA
CCTGATTTGGACCATTTTACTGATATCTACGTATGTACATCCGATCATCC
TCGTGAGCAATTCTCTGGGGGCAGGTTTGGACTGTTTTTTTCCTTACGTA
CTCTGTTACACCATTGAGCACCCTGTTGGTTCGGATAGTGTTGGTTTATG
GGGTTGCCTGAACAGGAAGTGCCCCATTTTTGGAATCGTTTACCATCCGT
CGGATTATGACTGAACGCCTCTGAGTCAGAATCCATTTTGAAAAGCGATG
ATGCACTCGCTCCCGATGCCAAGCGTATAGCGATAGCCGTCAGGCCAGCA
TCACGGACCATTGATCACCAGTCCAAACGTTGGGAGCGGTAGATCCTTTG
TAGACGACTCAATAAGGAACGGGGTATTGTAAGCAATGATAATTGGTTTA
GGCCTTGTCCTACGATCTGCTGATGATTAACGCCTCTTGTTCCGAAGATT
TGTGCGGAGTGAGTCTAACTCGCCGCCATATCTCTAACCCCTTCCCCGAC
GCGCGCTCGCGATTTCGCGAGTTCGCGATCGATCGATCGCGATCGATCGA
TCGAGGTGCATGCGTTCGTTCATCGTCGTGTTGTTCGAAAACGACAACAT
TAGCCGATGCATCTTACCCCCTTTCGCTTACGGCGCGACTGATCGACTGA
TCGATGGTGACTGCTCGGTCCAGCCCTTGAAGGGTCAAAGATGTAAGGTC
GGGAGATCATGGAAGGCGGTTTTGTTTCAATTACGTGTTTCTCTTCCTAT
CCGTTTTCAACCCGTTTTGGACGTTTTGTCTGGATGAACGAACGTTTCAC
ACGACAGCGGCCTCTCGGCGGGCATGGCCATCGGGATCGTCGGAGACGCG
GGAGTGCGCGCCGTGGGCCAGCAGGAGCGCCTTTTCGTGGGCATGATTCT
TATTCTGATCTTCGCGGAGGCTCTGGGGCTTTACGGAATGATCGTGGCGC
TCATCCTCTCCCAGTCGTCGtactcttGCTAAGGTGCGCCAGTTGTAACG
GCGCGAAGCAGGTGGTTCTAGGGGTGGGGGTAGGATAGAGGCGAGAGGCG
CTGGACTGTATGTACCGTACGGGACTGGGGGTGGAGAGCAATGTGTACAA
GGTCTTCTTGAGGCTGGATACGGGTTCTTCGGTAGCTCGCTCCCCTTTCT
TGTGCCTTGTTCTGTTCCACGTGTTCTATTCCACGTGATCTGTTCTGCTC
TTTTCTGTCCTCCAGTAATATATTGCCGTTTTTACGTTCCCACCATCTTC
TGTTGTTTGGCGTTTGCAGACGACCTCCTTACTTTTCCTCTGGTATAGTG
AAGTCTTTTGTTTCTCGTGGGGGCTTGACCATTGTTAAAATGGTTGAGTT
GTCCCCGATTTTCCTGTGGCAGAATGCCGAACAGGCCGGCCTCAAGTTAT
AGTTCCCGTGTCATGCGATCTCTTGAATGCGACACAAAGGGCCTACCATG
TTGGACGACATCCATGCCGGTCCTGATCCTGATGCCGGGGCCAAAGCTGG
CCTAGGGCTTGCGGCGGTCGGGACGGGAGGGTTGCTTGAGGTAACGGTGC
GGCACGTGAGGTGGTTAAAGCTTGTTTGTCCGCTCCGGTATGATGCGGAG
AAGGAGGAGGAGGTTGATCGCTGTTGTGTCGAGTGCGAGTACCTGGACGA
GAGGCGAAGGGCACGGATATGTGCGTCATGTATAGACGAGGGGGGAAGAC
ATGCATGCACGCCATGCATGCGCAACGTTTTATGGTACTGTAGCGCTTGA
CTCTCGGCTTGACTTGCTGCCGCCGTTCGCGAGGAACACTTTTGGAACTC
CTGTGGAGGCATCTGCAACCACCCCGGCCCCGCCCCCCCTCTTTACTCAC
TTTACAGCTGTCTTTCGGAGAGCTGATGAAGAACAGTCCTACTGACGTAA
AGAACACTTCGCTTTGCTCGATAACGGCAGCGGACTGCGGCGAGGCTGTG
CTGCCACCGTCATGGAGAACGTCGTACGGATGTGTTGGGATGGTATAGAA
AAGCATGGTTCGCCACGTGTTCCTGACTAAGCGGATTGCAGATTCATGTT
GAGATGACCTTTGCATGTGCTGTGCTACCTTGAAATTTGGGTCATTGGGT
CTTTGCTGTGTGGCTACACTCACTCTAATACGTCCGAGACGGATAAAACC
ACCTGTTCTAGCTCGTGTTATTGTTCCAGAATCTCGTGTCGCTACCTGGG
CGGAGATGTTGGGGCTGCATGAATGAGATGGGACGGTGAAAGGAATTGCA
GGGTTGAAGAGACATCAAATTTCGTGCGGCTTCTGCGGCGACCTCGGAGG
TCTTGGCACAGTTGAACCGTGCGATGAGGATAGAGCGATGTGCAGCTGAA
ACTATAGCTGCGGATAAGGTTCCCAATGCGTGAGGAATTGGCGAGTTGGG
ACATAACAAGAGATGGTCTGGCATGCGTCATCTCGACACTTGACAGACAG
CCTTACAGCCACCGCGTTCAAAGCCTTTTTCCTCTCCTCTCTACTCCCAC
GAGTATGGATTTTACATCACGAGTCGTAGTTCCTTGAAATATGTTATTTT
GAACGCTTTCTCTAGAGCTGGGC
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig959:163800..169472+

>mRNA_D-dichotoma_M_contig959.20295.1 ID=mRNA_D-dichotoma_M_contig959.20295.1|Name=mRNA_D-dichotoma_M_contig959.20295.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1032bp|location=Sequence derived from alignment at D-dichotoma_M_contig959:163800..169472+ (Dictyota dichotoma ODC1387m male)
ATGCGAGAAAGGGTTGGGGTGCGTCGTGTTGAATTTGTTTCGATTCTCTC
GGCAGCCGGGAACTACGGACCCCTTCGAAGGACTTCCGCACATACACATG
CGAGAAAGGGTTGGGGTGCGTCGTGTTGAATTTGTTTCGATTCTCTCGGC
AGCCGGGAACTACGGACCCCTTCGAAGGACTTCCGCACATACACACATCG
GCGCCGCGTACGGAACCGCAAAGTCCGGCGTGGGAATTTCGTCGATGGGT
GTCATGAACCCGGGGCTCGTGATGCGTAACATCATCCCCGTGGTTATGGC
TGGTGTGCTGGGTATCTACGGTCTCATCGTGGCGGTTATCCTGTCGGGTT
CAAACATCGGCGCCGCGTACGGAACCGCAAAGTCCGGCGTGGGAATTTCG
TCGATGGGTGTCATGAACCCGGGGCTCGTGATGCGTAACATCATCCCCGT
GGTTATGGCTGGTGTGCTGGGTATCTACGGTCTCATCGTGGCGGTTATCC
TGTCGGGTTCAATCTCCACCCCAACCGCGGAAGGGAACACCTTCTCGTCT
TATTCTGGGTACGCTTTCCTTGCCGCGGGCCTGGCATGTGGCCTCAGTCT
CCACCCCAACCGCGGAAGGGAACACCTTCTCGTCTTATTCTGGGTACGCT
TTCCTTGCCGCGGGCCTGGCATGTGGCCTCAGCGGCCTCTCGGCGGGCAT
GGCCATCGGGATCGTCGGAGACGCGGGAGTGCGCGCCGTGGGCCAGCAGG
AGCGCCTTTTCGTGGGCATGATTCTTATTCTGATCTTCGCGGAGGCTCTG
GGGCTTTACGGAATGATCGTGGCGCTCATCCTCTCCCAGTCGTCGtactc
ttGCTAACGGCCTCTCGGCGGGCATGGCCATCGGGATCGTCGGAGACGCG
GGAGTGCGCGCCGTGGGCCAGCAGGAGCGCCTTTTCGTGGGCATGATTCT
TATTCTGATCTTCGCGGAGGCTCTGGGGCTTTACGGAATGATCGTGGCGC
TCATCCTCTCCCAGTCGTCGtactcttGCTAA
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