mRNA_D-dichotoma_M_contig959.20289.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE) HSP 1 Score: 344 bits (882), Expect = 6.780e-103 Identity = 245/621 (39.45%), Postives = 318/621 (51.21%), Query Frame = 1
Query: 106 MIESRLAFLATTLFFLRCCPKEGWS---LPAVRQYRRRRPSPGSASPTVLMLASHRPAQPRDFGTHYPQFGKFSMQHKTG----QRLASTAISDSVISTWGSDVTPGTSSTTLDFMYSEVAPRSEEMASMPDAEKEAEHCSQGIEMVRSVHGVAVGCSRHHDHPHLSKLTDQRRYKSDQSSKDQPGRRCLDKTPRLTQLHAKASNGMGRLCGWTNPPGDSTRRQGRPLLFHEASLLLRPVNFDIARSAGTVVHWGRSRGCVAAGAARKARIGVR--------KWTGRQVALVSAIKAPKNLCAGGSSSVRGTLGAGVNFLREALWSMRRGRNGWRRDRSETDGKYHGSRLAYVTDQTVQNVIDVVTGDGWEHVTTTSGVVVYRRFVAVSADGVPVEPGLSPETTDVL----EDGFNGGSCSAVQEAALLTRPAPKAAATSR----QFACVKATAILDVPPDVVYRLFADNSRVNEYNELCREVVDLETLSDDSKITWAASGRLGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSKYVRSEILLAGNFMRPVPGDPSRTEFLMITQVNPGGAAETRAGAMLVNSLCTSSPVNFVRRLEVAAQKLMREVEEVGERS 1899
M+ R+A LA TL L C G + +P +Q+RR P G P + +DFG+ YPQ G+F QHK G + A ++ + W + + +S + + + P ++ AS ++ H S PR ++ A+ S L W RR+ R + A ++ + + A+ + R + + A +G+R + GR++ L+ K +GG LG G E RR E L +TD+ VQNV+DVV DGWE V GVVV+R+++A+ DG P P + ++ V+ +A PAP + + QFACVKA+AIL VPP+VVY LFADNSRV EYNE CREV DLE LS DSKITWAASGR+GPFKARDFCTLVHFRTLSDGTLAQVS+PVEHPAAPR+S+YVRSEILLAGNFMRPVPGDPSRTEFLM+T VNPGGAAETRAGAMLVNSLCTSSPV F+RRLEVAA+KLM E+++ +R+
Sbjct: 1 MLRERVAILAATLLLLECHSMSGGATGAIPDQQQHRRHVPHYGCT-----------PQRAQDFGSRYPQTGRFEAQHKRGLVVDDQPAGEEWEEADLECWSATMAAIVASGSTLALQRTLKPDEQQSASAEGYGRQQRHIRXXXXXXXXXXXXXXXNSS---------------------------------APRFRRIRAELS---ANLDAWR-----MRRRRARETIPAAAIVIRQHLTHLTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRKRQNPDGSGGDK-----LGMGKEGEAE------------RRKMRE---------LQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGRVEGSA--DDPAPVGEDSGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRA 541
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI) HSP 1 Score: 341 bits (874), Expect = 2.660e-102 Identity = 258/618 (41.75%), Postives = 320/618 (51.78%), Query Frame = 1
Query: 106 MIESRLAFLATTLFFLRCCPKEGWS---LPAVRQYRRRRPSPGSASPTVLMLASHRPAQPRDFGTHYPQFGKFSMQHKTGQRL----ASTAISDSVISTWGSDVTPGTSSTTLDFMYSEVAPRSEEMASMPDAEKEAEHCSQGIEMVRSVHGVAVGCSR----HHDHPHLSKLTDQRRYKSDQSSKDQPGRRCLDKTPRLTQLHAKASNGMGRLCGWTNPPGDSTRRQGRPLLFHEASLLLRPVNFDIARSAGTVVHWGRSRGCVAAGAARKARIGVRKWTGRQVALVSAIKAPKNLCAGGSSSVRGTLGAGVNFLREALWSMRRGRNGWRRDRSETDGKYHGSRLAYVTDQTVQNVIDVVTGDGWEHVTTTSGVVVYRRFVAVSADGVPVEPGLSPETTDVL-------EDGFNGGSCSAVQEAALLTRPAPKAAATSR--QFACVKATAILDVPPDVVYRLFADNSRVNEYNELCREVVDLETLSDDSKITWAASGRLGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSKYVRSEILLAGNFMRPVPGDPSRTEFLMITQVNPGGAAETRAGAMLVNSLCTSSPVNFVRRLEVAAQKLMREVEEVGERS 1899
M+ R+A LA TL L+C G + LP +Q+RR P G P +DFG+ YPQ G+F HK G L A + WG+ + +S + + + P ++ AS ++ H + LS D R + ++ + P + + LTQL A+ S G +G F A LL A+++G V G AG A R GR++ L+ K GG G LG G E RR E L +TD+ VQNV+DVV DGWE V GVVV+R+++A+ DG P F GG V+ +A + P + S+ QFACVKA+AIL VPP+VVY LFADNSRV EYNE CREV DLE LS DSKITWAASGR+GPFKARDFCTLVHFRTLSDGTLAQVS+PVEHPAAPR+S+YVRSEILLAGNFMRPVPGDPSRTEFLM+T VNPGGAAETRAGAMLVNSLCTSSPV F+RRLEVAA+KLM E+++ +R+
Sbjct: 34 MLRERVAILAATLLLLKCHSMSGGATGALPDQQQHRRHVPHYGCTPPRA-----------QDFGSRYPQTGRFEAWHKRGLVLDDEPAGEEWEGADRECWGATIAAIVASGSTLALQRTLKPDEQQSASAEGYGRQPRHYRRXXXXXXXXXXXXXXXXSAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRQ-HLTQLTAQLSELTG---------------EG----FRRAERLL-----SAAKASGNV-------GIRIAGCAELLR-----RRGRELFLLGLRKKQNPDGLGGE----GKLGKGKEGEAE------------RRKMRE---------LQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXXXXXXXQAAGVPKAEASSAFVGGR---VEGSADDSVPVGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQQKRA 575
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI) HSP 1 Score: 212 bits (539), Expect = 4.790e-56 Identity = 112/245 (45.71%), Postives = 149/245 (60.82%), Query Frame = 1
Query: 1123 DQTVQNVIDVVTGDGWEHVTTTSGVVVYRRFVAVSADGVPVEPGLSPETTDVLEDGFNGGSCSAVQEAALLTRPAPKAAATSRQFACVKATAILDVPPDVVYRLFADNSRVNEYNELCREVVDLETLSDDSKITWAASGRLGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSKYVRSEILLAGNFMRPVPGDPSRTEFLMITQVNPGGAAETRAGAMLVNSLCTSSPVNFVRRLEVAA 1857
D +V+ V+ V+ DGWE VT SGVVV R+FV ++++G + +FACVKA LD +Y+LF DN RV+EYN+ C+EV DLE LSDD+K++WA + R PFKARDF T VH+RTL DGT+ ++RPVEHPAA R KYVR+EIL+A N MRP DPS+T+F+ +T +NPGG A++R GA +VN LC +PVN + LE +A
Sbjct: 252 DASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXX---XXXXXRGIVDEG------------------------AAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 469
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Match: A0A7S2V5A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A8_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.890e-53 Identity = 108/250 (43.20%), Postives = 149/250 (59.60%), Query Frame = 1
Query: 1126 QTVQNVIDVVTGDGWEHVTTTSGVVVYRRFVAVSADGVPVEPGLSPETTDVLEDGFNGGSCSAVQEAALLTRPAPKAAATSRQFACVKATAILDVPPDVVYRLFADNSRVNEYNELCREVVDLETLSDDSKITWAASGRLGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSKYVRSEILLAGNFMRPVPGDPSRTEFLMITQVNPGGAAETRAGAMLVNSLCTSSPVNFVRRLEVAAQKLMRE 1875
+ + V V + W+ +T+ GV V+ R A V +GG AV + +FA +KA +D P + V++LF DNSRV EYN+ C E+ DLE + +K+TW+ASG+ GPFKARDFCTLVHF TL+DGT A VS P HP AP +S+YVRSE+++AG+FMR P DP++T F ITQVNPGG A + A +VNSL T P+ FV+++E+AAQ+ M++
Sbjct: 166 EVLSTVWAVCSSGDWDQITSGEGVTVFARRKQGGARARAVSAA-------------HGGEGGAVND----------------KFAVIKAVGTIDAPIEEVHKLFVDNSRVGEYNDHCHEIKDLEWVGPRTKVTWSASGKYGPFKARDFCTLVHFATLADGTQAIVSVPFNHPQAPATSRYVRSEVIMAGHFMRRDPKDPNKTAFTTITQVNPGGIAGSAGAAKIVNSLSTQGPITFVKKVELAAQQTMKQ 386
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Match: I2CRQ3_NANGC (Lipid transfer protein 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ3_NANGC) HSP 1 Score: 191 bits (485), Expect = 1.060e-52 Identity = 87/144 (60.42%), Postives = 114/144 (79.17%), Query Frame = 1
Query: 1372 QFACVKATAILDVPPDVVYRLFADNSRVNEYNELCREVVDLETLSDDSKITWAASGRLGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSKYVRSEILLAGNFMRPVPGDPSRTEFLMITQVNPGGAAETRAGAMLVN 1803
+FACVKA ++D P D V+ LF D++RV EYNE CRE+ D++TLS ++K+TW+ASGR GPFKARDFCT+VH+R L DG L V+R EH APRS KYVRSEILLAGN MRP P DP++T + +T +NPGG+ +++AGA++VN
Sbjct: 16 RFACVKAVGVVDAPVDRVFDLFLDSARVGEYNEHCREIQDIDTLSANTKVTWSASGRYGPFKARDFCTVVHYRRLEDGRLVVVNRAAEHVRAPRSDKYVRSEILLAGNIMRPHPSDPNKTLLVTLTHINPGGSIDSKAGALMVN 159
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE) HSP 1 Score: 197 bits (501), Expect = 1.450e-51 Identity = 94/162 (58.02%), Postives = 120/162 (74.07%), Query Frame = 1
Query: 1372 QFACVKATAILDVPPDVVYRLFADNSRVNEYNELCREVVDLETLSDDSKITWAASGRLGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSKYVRSEILLAGNFMRPVPGDPSRTEFLMITQVNPGGAAETRAGAMLVNSLCTSSPVNFVRRLEVAA 1857
+FACVKA LD +Y+LF DN RV+EYN+ C+EV DLE LSDD+K++WA + R PFKARDF T VH+RTL DGT+ V+RPVEHPAA R KYVR+EIL+A N MRP DPS+T+F+ +T +NPGG A++R GA +VN LC +PVN + LE +A
Sbjct: 243 KFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 404
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Match: A0A6U4ZLH7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4ZLH7_HEMAN) HSP 1 Score: 191 bits (485), Expect = 1.750e-51 Identity = 88/164 (53.66%), Postives = 118/164 (71.95%), Query Frame = 1
Query: 1372 QFACVKATAILDVPPDVVYRLFADNSRVNEYNELCREVVDLETLSDDSKITWAASGRLGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSKYVRSEILLAGNFMRPVPGDPSRTEFLMITQVNPGGAAETRAGAMLVNSLCTSSPVNFVRRLEVAAQK 1863
+F CVKA A+LD P VY LF DN+RV EYNE C+++ DLE + +K+TW+AS R+GPFK RDF T VH+RTL D TL V+R +HPAAP++ +Y+R EI+L GN M+PVP DP +T F M+T VNPGG A TR G M++NS + P++FV+ L A ++
Sbjct: 37 KFLCVKAEAVLDASPAQVYTLFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLPDQTLLVVNRAEDHPAAPQTDRYLRMEIVLGGNVMKPVPSDPEKTMFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDALKR 200
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA) HSP 1 Score: 193 bits (490), Expect = 3.720e-51 Identity = 104/258 (40.31%), Postives = 146/258 (56.59%), Query Frame = 1
Query: 1087 GKYHGSRLAYVTDQTVQNVIDVVTGDGWEHVTTTSGVVVYRRFVAVSADGVPVEPGLSPETTDVLEDGFNGGSCSAVQEAALLTRPAPKAAATSRQFACVKATAILDVPPDVVYRLFADNSRVNEYNELCREVVDLETLSDDSKITWAASGRLGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSKYVRSEILLAGNFMRPVPGDPSRTEFLMITQVNPGGAAETRAGAMLVNSLCTSSPVNFVRRLEVAAQ 1860
GK + V +++ VV G GW V++T+ R ++ G +E T+ +D + +F+CVKATAIL+ P VY+LF DNS+V+EYNE C+++ D+E +S D+K+ W+ + GPFK RDF T+VH+R DGTL ++RP HP P ++ R+E+LLAGN MRPV GD S+TEF MIT VNPGG GA +VN +C+ PV+F+RRLE AAQ
Sbjct: 71 GKPTSGEVRRANQANVDSMLAVVRGAGWRQVSSTNDHNRIRVYLKSVTPGTHLE-------TEAADD------------------------VAAAKFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTMVHYRREPDGTLMVLNRPCNHPDRPPVPQFQRAELLLAGNVMRPVQGDKSKTEFTMITHVNPGGVVNNALGAAIVNRICSQGPVDFIRRLERAAQ 297
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Match: A0A7S4NFJ2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NFJ2_GUITH) HSP 1 Score: 178 bits (452), Expect = 1.180e-46 Identity = 98/239 (41.00%), Postives = 136/239 (56.90%), Query Frame = 1
Query: 1144 IDVVTGDGWEHVTTTSGVVVYRRFVAVSADGVPVEPGLSPETTDVLEDGFNGGSCSAVQEAALLTRPAPKAAATSRQFACVKATAILDVPPDVVYRLFADNSRVNEYNELCREVVDLETLSDDSKITWAASGRLGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSKYVRSEILLAGNFMRPVPG-----DPSRTEFLMITQVNPGGAAETRAGAMLVNSLCTSSPVNFVRRL 1845
ID V D E + T G + + +DG+ V + PE+ + A + S +F CV ++ ILD PP+ VY F DNSRV+EYNE C++V DLE L ++KITW+ASGR+GPFK RDF T VH+RT SDG+L +R +HP AP + +++R EI++ GN +RP D SRT ++T VNPGG AETR G M++NS S P+ F++ L
Sbjct: 6 IDAVNDDLVEKILTICGEASWTQIS--DSDGIKVWRTMLPESLQI----------------------AGRPLGPSAKFFCVMSSGILDAPPEQVYTYFVDNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIGGNVLRPAREADGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGL 220
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Match: A0A7S0QTI7_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTI7_9CRYP) HSP 1 Score: 177 bits (448), Expect = 2.420e-46 Identity = 83/159 (52.20%), Postives = 113/159 (71.07%), Query Frame = 1
Query: 1372 QFACVKATAILDVPPDVVYRLFADNSRVNEYNELCREVVDLETLSDDSKITWAASGRLGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHP-AAPRSSKYVRSEILLAGNFMRPVPGDPSRTEFLMITQVNPGGAAETRAGAMLVNSLCTSSPVNFVRRL 1845
+F C+KA +LD PP V+ LF DN+R EYNE CRE+ D+E + + +K+TW+ASGR+GPFK RDF T VH+R+L DGTL V+R + P A S +Y+R E+ L G+ +RP+PG+P+RT + + VNPGG AETR GAML+N+ S PV V+RL
Sbjct: 40 KFDCIKAAGVLDAPPAEVFELFIDNARAGEYNEFCRELRDVEFIDNATKVTWSASGRVGPFKERDFVTRVHYRSLPDGTLLVVNRAEDAPLTAASSDRYLRMEMYLGGSVLRPLPGNPNRTIYTTLAHVNPGGVAETRIGAMLMNAAAASGPVKLVQRL 198 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig959.20289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig959.20289.1 >prot_D-dichotoma_M_contig959.20289.1 ID=prot_D-dichotoma_M_contig959.20289.1|Name=mRNA_D-dichotoma_M_contig959.20289.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=694bp MIESRLAFLATTLFFLRCCPKEGWSLPAVRQYRRRRPSPGSASPTVLMLAback to top mRNA from alignment at D-dichotoma_M_contig959:7304..16444+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig959.20289.1 ID=mRNA_D-dichotoma_M_contig959.20289.1|Name=mRNA_D-dichotoma_M_contig959.20289.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=9141bp|location=Sequence derived from alignment at D-dichotoma_M_contig959:7304..16444+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig959:7304..16444+ >mRNA_D-dichotoma_M_contig959.20289.1 ID=mRNA_D-dichotoma_M_contig959.20289.1|Name=mRNA_D-dichotoma_M_contig959.20289.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=4164bp|location=Sequence derived from alignment at D-dichotoma_M_contig959:7304..16444+ (Dictyota dichotoma ODC1387m male)back to top |