mRNA_D-dichotoma_M_contig957.20281.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 5.630e-14 Identity = 39/75 (52.00%), Postives = 57/75 (76.00%), Query Frame = 3 Query: 63 FMIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVYEALLVGAHVTMVVLAFVEAVVVS 287 F++ E LAPY S WD+ +SR+ HAV+F SMY+ALLL+V+ S ERV SQ+V+E +LV AH M+++ +E VV++ Sbjct: 1970 FVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLT 2044
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Match: A0A6H5KP34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP34_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 3.890e-13 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 60 IFMIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVYEALLVGAHVTMVVLAFVEAVVVS 287 +F + EAL P WD+ VSR++HAV+F S+Y+ALLL+V+ S E+ +SQKV+EA+LV AH MV+ VE +V+ Sbjct: 58 VFAVLSEALHPNAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSDEKRSSQKVFEAVLVAAHACMVLAVVVETIVLG 133
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 4.430e-13 Identity = 40/87 (45.98%), Postives = 63/87 (72.41%), Query Frame = 3 Query: 51 VCSIFMIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVYEALLVGAHVTMVVLAFVEAVVVSGN-WLKRR 308 + +F + EALAPY S WD+ + R+ HAV+ SMY+ALLL+V+ S ER +SQ+V+E+LLV AHV MV + +E ++ + + W+++R Sbjct: 876 IAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKR 962
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Match: D8LH65_ECTSI (Polymorphic outer membrane protein G/I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH65_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 5.520e-13 Identity = 37/77 (48.05%), Postives = 58/77 (75.32%), Query Frame = 3 Query: 63 FMIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVYEALLVGAHVTMVVLAFVEAVVVSGN 293 F+I E L+PY S WD V+R+ H V+F SM++ALLL+V+ + E +SQKV+E++LV AHV MV++ +EA+V++ + Sbjct: 601 FVIVSEVLSPYSSKWDRWVNRMGHVVVFVSMFVALLLKVDVADEDASSQKVFESVLVAAHVCMVLVVVIEAIVLTSS 677
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 6.010e-13 Identity = 37/76 (48.68%), Postives = 56/76 (73.68%), Query Frame = 3 Query: 60 IFMIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVYEALLVGAHVTMVVLAFVEAVVVS 287 +F + EAL PY WD+ VSR++HAV+F S+Y+ALLL+V+ S E+ +SQKV+EA+LV AH M++ VE +++ Sbjct: 919 VFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLG 994
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 6.580e-13 Identity = 37/76 (48.68%), Postives = 56/76 (73.68%), Query Frame = 3 Query: 60 IFMIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVYEALLVGAHVTMVVLAFVEAVVVS 287 +F + EAL PY WD+ VSR++HAV+F S+Y+ALLL+V+ S E+ +SQKV+EA+LV AH M++ VE +++ Sbjct: 2657 VFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLG 2732
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 1.580e-12 Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 63 FMIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVYEALLVGAHVTMVVLAFVEAVV 281 F++ EAL PY+S WD ++R+ H V+FSSM+L LLL+VN S E VASQ+V+E +LV H MV+ VE VV Sbjct: 1526 FVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVV 1598
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 2.090e-12 Identity = 45/116 (38.79%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 63 FMIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVYEALLVGAHVTMVVLAFVEAVVVSGNWLKRR*IYCHDISHVRTPCCLRSG-GTNSGKFNPFGWEM 407 F++ E LAP+ S WD+ ++R H V+F SMY+ALLL+V+ SGER SQ+VYE +LV AH M++ E V++ W + + R RSG G S + +PF ++ Sbjct: 1159 FVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLT--WSLKVEQRQEPTTRFRHGKLFRSGRGLESAQDDPFSADL 1272
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 2.150e-12 Identity = 40/79 (50.63%), Postives = 57/79 (72.15%), Query Frame = 3 Query: 51 VCSIFMIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVYEALLVGAHVTMVVLAFVEAVVVS 287 V F++ E LAPY S WD+ ++R+ H V+ +SMYLALLL+V+ S ER +SQ V+EA+LV AHV MVV+ E +V++ Sbjct: 1511 VAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLA 1589
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 53.5 bits (127), Expect = 8.430e-5 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 3 Query: 51 VCSIFMIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVYEALLVGAHVTMVVLAFVEAV 278 + +IFM + L+P+ +D + R +IF SMYLALLL+V+ S E SQ + +L+ AHV MV++ V+AV Sbjct: 985 LAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAV 1060 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig957.20281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig957.20281.1 >prot_D-dichotoma_M_contig957.20281.1 ID=prot_D-dichotoma_M_contig957.20281.1|Name=mRNA_D-dichotoma_M_contig957.20281.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=82bp MIRCEALAPYESLWDSCVSRLAHAVIFSSMYLALLLEVNFSGERVASQKVback to top mRNA from alignment at D-dichotoma_M_contig957:165989..166618+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig957.20281.1 ID=mRNA_D-dichotoma_M_contig957.20281.1|Name=mRNA_D-dichotoma_M_contig957.20281.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=630bp|location=Sequence derived from alignment at D-dichotoma_M_contig957:165989..166618+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig957:165989..166618+ >mRNA_D-dichotoma_M_contig957.20281.1 ID=mRNA_D-dichotoma_M_contig957.20281.1|Name=mRNA_D-dichotoma_M_contig957.20281.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=492bp|location=Sequence derived from alignment at D-dichotoma_M_contig957:165989..166618+ (Dictyota dichotoma ODC1387m male)back to top |