mRNA_D-dichotoma_M_contig957.20279.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.130e-24 Identity = 60/116 (51.72%), Postives = 77/116 (66.38%), Query Frame = 2 Query: 1256 LPANMQCTVSFCFCA--ITYICLADPYPLRAFQ-QCVCDARYRIIAWTMNSPGSRNDRTAYKLSGLDKLLNCLSPGYFIVGDAAYPASDRVPVPHPGKNLPASQDAYNFFQSQCRI 1594 +P Q ++ + A TY C+ R+ VCDA+YRI+AW MN PGS+NDRTA+ SG DKLL L G+F+VGDAAY AS+RV VP PG +L ASQDA N++ SQCR+ Sbjct: 106 IPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRM 221
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 112 bits (281), Expect = 2.970e-24 Identity = 52/82 (63.41%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 1349 QCVCDARYRIIAWTMNSPGSRNDRTAYKLSGLDKLLNCLSPGYFIVGDAAYPASDRVPVPHPGKNLPASQDAYNFFQSQCRI 1594 Q VCDA+YRI+AWTM+ PGS+NDRTA+ + DKLL L G+F+VGDAAY AS+RV VP PG +L ASQDA N++ SQCR+ Sbjct: 59 QAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRM 140
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 114 bits (286), Expect = 3.560e-24 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 1349 QCVCDARYRIIAWTMNSPGSRNDRTAYKLSGLDKLLNCLSPGYFIVGDAAYPASDRVPVPHPGKNLPASQDAYNFFQSQCRI 1594 Q VC+ARY+I AWTMN PGS NDRTA+K SG +++L L G +IVGD AYPASD+V VP+PG L SQD+YNF+QSQ RI Sbjct: 152 QAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARI 233
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 115 bits (289), Expect = 3.850e-24 Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 1349 QCVCDARYRIIAWTMNSPGSRNDRTAYKLSGLDKLLNCLSPGYFIVGDAAYPASDRVPVPHPGKNLPASQDAYNFFQSQCRI 1594 Q VCDA+YRI+AW MN PGS+NDRTA+ SG DKLL L G+F+VGDAAY AS+RV VP PG +L ASQDA N++ SQCR+ Sbjct: 211 QAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRM 292
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 115 bits (287), Expect = 7.100e-24 Identity = 56/82 (68.29%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 1349 QCVCDARYRIIAWTMNSPGSRNDRTAYKLSGLDKLLNCLSPGYFIVGDAAYPASDRVPVPHPGKNLPASQDAYNFFQSQCRI 1594 Q VC+ARY IIAWTMN PGS NDRTA+K S +L L PG +IVGDAAYPASD+V VP+PG +L SQDAYNF+QSQ RI Sbjct: 218 QGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARI 299
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 114 bits (285), Expect = 1.410e-23 Identity = 55/82 (67.07%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 1349 QCVCDARYRIIAWTMNSPGSRNDRTAYKLSGLDKLLNCLSPGYFIVGDAAYPASDRVPVPHPGKNLPASQDAYNFFQSQCRI 1594 Q +C+A Y II WTMN PGS+NDRTA+K SG D LL+ + P FIVGDAAYPAS+RV VP PG L SQDAYNF+QSQ RI Sbjct: 222 QGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARI 303
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 101 bits (252), Expect = 1.800e-19 Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 1606 EQTFGILVRTWGILRRPMEVRQPRFAYIVNSIVCLHNFCRNRNVEVPARDDGEVSLPADISFS*DGRISGDYFKAAQRRSGRPAND 1863 EQT+GILVR WGIL RPMEVR +F ++VN++V LHNFC +R V+VP + G P +++F DG IS DYF+ R+GRP D Sbjct: 274 EQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCWDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKD 359
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 2.120e-16 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 2 Query: 104 DEMAKAARAFRERSSQGVIDKCVGALGGLFIRLIRPTRKEDGEPNKYYSGHKKAFGMNFQV 286 ++ A+AA FR RSS V+ KCVGA+ LF+R+I+P+ KE EPN YY+GHKK FGMNFQV Sbjct: 66 EDAARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV 126
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Match: A0A6H5KLK3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK3_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 9.760e-16 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 1349 QCVCDARYRIIAWTMNSPGSRNDRTAYKLSGLDKLLNCLSPGYFIVGDAAYPASDRVPVPHPGKNLPASQDAYNFFQSQCRI 1594 Q CDA YR + + +PGS ND TA+ S L + L PG++++GDAAYP SD + P+PG+ LP +DA+NF+ SQ R+ Sbjct: 4 QATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVQNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRV 85
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 4.320e-15 Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 1349 QCVCDARYRIIAWTMNSPGSRNDRTAYKLSGLDKLLNCLSPGYFIVGDAAYPASDRVPVPHPGKNLPASQDAYNFFQSQCRI 1594 Q CDA YR + + S G+ ND TA+ S L + + L PGY+++GDAAYP SD++ P+PGK LP QDAYNF+ SQ R+ Sbjct: 243 QATCDANYRFCSMSAISAGATNDWTAWNRSELSRAVARLPPGYYMLGDAAYPLSDQLLTPYPGKLLPRDQDAYNFYLSQLRV 324 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig957.20279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig957.20279.1 >prot_D-dichotoma_M_contig957.20279.1 ID=prot_D-dichotoma_M_contig957.20279.1|Name=mRNA_D-dichotoma_M_contig957.20279.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=127bp MVLPANMQCTVSFCFCAITYICLADPYPLRAFQQCVCDARYRIIAWTMNSback to top mRNA from alignment at D-dichotoma_M_contig957:102559..105405+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig957.20279.1 ID=mRNA_D-dichotoma_M_contig957.20279.1|Name=mRNA_D-dichotoma_M_contig957.20279.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=2847bp|location=Sequence derived from alignment at D-dichotoma_M_contig957:102559..105405+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig957:102559..105405+ >mRNA_D-dichotoma_M_contig957.20279.1 ID=mRNA_D-dichotoma_M_contig957.20279.1|Name=mRNA_D-dichotoma_M_contig957.20279.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=762bp|location=Sequence derived from alignment at D-dichotoma_M_contig957:102559..105405+ (Dictyota dichotoma ODC1387m male)back to top |