mRNA_D-dichotoma_M_contig957.20276.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 291 bits (744), Expect = 1.730e-90 Identity = 164/433 (37.88%), Postives = 213/433 (49.19%), Query Frame = 2 Query: 2 RWLAGASMYEGVDGHVIANGTAYQTAYRILQAINACPDMVCKWPNNDGEMAKAARAFRERSSHGVIDKCVGALGGLLIRLIRPTRKEDGESNKYHIGHKTTFGMNFQVGRREVQKHFGVTVQQHSSFRKQGCTTVSRGLKHEHKVPHS*VSIKG*GAHEVPPN*VHFYSPVVDLNLHYGAEFQSSSSRKGKRRRKRYVLVSYCRWDVTV*SSPETYHVLFPLRAFQQCV*DARYRIIAWTMNSPGSRNDRTAYKFSAIEKLLNRLPPGYFIVGDAAYPASDRVPGFL*LFPVPVSD---------------RMSVEQTFGILVRTWGILWRPMEVRQLRFAYIVNSIVRLHNFCRDRNVEVPARDDGEVGLPADLSFSEDGCINGDYFKAAQGRSS*PANDQTGLSGPRERIPSKLEVAGIVRPAHNLARNSR 1255 RWLAG S+YE +DGHVIA TAY ++ A+NACP++ CKWP + + A+AA FR RSS V+ KCVGA GL +R+I+P+ KE E N Y+ GHK FGMNFQ V DA+YRI+AW MN PGS+NDRTA+ FS +KLL LP G+F+VGDAAY AS+RV + P P + RM++EQT+GILVR WGILWRPMEVR +F ++VN++VRLHNFCRDR V+VP + G P +++F +DG I+ DYF+ R+ P DQ S PRE I +LEVAG++RP HN+AR+ + Sbjct: 106 RWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQA------------------------------------------------------------------------------------------------------------------------VCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERV-----VVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHK 412
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 239 bits (609), Expect = 1.200e-70 Identity = 145/419 (34.61%), Postives = 193/419 (46.06%), Query Frame = 2 Query: 2 RWLAGASMYEGVDGHVIANGTAYQTAYRILQAINACPDMVCKWPNNDGEMAKAARAFRERSS-HGVIDKCVGALGGLLIRLIRPTRKEDGESNKYHIGHKTTFGMNFQVGRREVQKHFGVTVQQHSSFRKQGCTTVSRGLKHEHKVPHS*VSIKG*GAHEVPPN*VHFYSPVVDLNLHYGAEFQSSSSRKGKRRRKRYVLVSYCRWDVTV*SSPETYHVLFPLRAFQQCV*DARYRIIAWTMNSPGSRNDRTAYKFSAIEKLLNRLPPGYFIVGDAAYPASDRVPGFL*LFPVPVSDRMSVEQTFGILVRTWGILWRPMEVRQLRFAYIVNSIVRLHNFCRDRNVEVPARDDGEVGLPADLSFSEDGCINGDYFKAAQGRSS*PANDQTGLSGPRERIPSKLEVAGIVRPAHNLARNSR 1255 RWLAG S+YE +DGHVIA TAY ++ A+NACP++ CKWP +GE +F ++ V+ KCVGA+ GL +R+I+P+ KE E N Y+ GHK FGMNFQV C S+NDRTA+ FS +KLL LP G+F+VG+AAY AS+RV + P P + EQT+GILVR WGILWRPMEVR +F ++VN++VRLHNFC DR V+VP + G P +++F +DG I+ DYF+ R+ P DQ S PRE I +LEVAG++RP HN+AR+ + Sbjct: 117 RWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWP--EGEDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV-----------------------C-----------------------------------------------------------------------------------------------------------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERV-----VVPFPGTSP-PXEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCWDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHK 391
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 218 bits (555), Expect = 2.550e-64 Identity = 129/369 (34.96%), Postives = 171/369 (46.34%), Query Frame = 2 Query: 194 VIDKCVGALGGLLIRLIRPTRKEDGESNKYHIGHKTTFGMNFQVGRREVQKHFGVTVQQHSSFRKQGCTTVSRGLKHEHKVPHS*VSIKG*GAHEVPPN*VHFYSPVVDLNLHYGAEFQSSSSRKGKRRRKRYVLVSYCRWDVTV*SSPETYHVLFPLRAFQQCV*DARYRIIAWTMNSPGSRNDRTAYKFSAIEKLLNRLPPGYFIVGDAAYPASDRVPGFL*LFPVPVSD---------------RMSVEQTFGILVRTWGILWRPMEVRQLRFAYIVNSIVRLHNFCRDRNVEVPARDDGEVGLPADLSFSEDGCINGDYFKAAQGRSS*PANDQTGLSGPRERIPSKLEVAGIVRPAHNLARNSR 1255 V+ KCVGA+ GL +R+I+P+ KE E N Y+ GHK FGMNFQ V DA+YRI+AWTM+ PGS+NDRTA+ F+ +KLL LP G+F+VGDAAY AS+RV + P P + RM++EQT+GILVR WGILWRPMEVR +F ++VN++VRLHNFCRDR V+VP + G P +++F +DG I+ DYF+ R+ P DQ S PRE I +LEVAG++RP HN+AR+ + Sbjct: 17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQA------------------------------------------------------------------------------------------------------------------------VCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERV-----VVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHK 260
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 213 bits (542), Expect = 1.660e-60 Identity = 141/432 (32.64%), Postives = 187/432 (43.29%), Query Frame = 2 Query: 2 RWLAGASMYEGVDGHVIANGTAYQTAYRILQAINACPDMVCKWPNNDGEMAKAARAFRERSSHGVIDKCVGALGGLLIRLIRPTRKEDGESNKYHIGHKTTFGMNFQVGRREVQKHFGVTVQQHSSFRKQGCTTVSRGLKHEHKVPHS*VSIKG*GAHEVPPN*VHFYSPVVDLNLHYGAEFQSSSSRKGKRRRKRYVLVSYCRWDVTV*SSPETYHVLFPLRAFQQCV*DARYRIIAWTMNSPGSRNDRTAYKFSAIEKLLNRLPPGYFIVGDAAYPASDRVPGFL*LFPVPVSD---------------RMSVEQTFGILVRTWGILWRPMEVRQLRFAYIVNSIVRLHNFCRDRNVEVPARDDGEVGLPADLSFSEDGCINGDYFKAAQGRSS*PANDQTGLSGPRERIPSKLEVAGIVRPAHNLARNS 1252 R+LAG S++E +DG+VIA TAY +R++ AIN ++ C WP + + + +R RS++GVI CVGA+ GL +R+ +P+ + ++ GHK FGMNFQ GV C +ARY IIAWTMN PGS NDRTA+K S +L LPPG +IVGDAAYPASD+V L P P + R+S+EQ FGI+V+TWGILWRP+++R R + ++NS+VRLHNF R R +P R V P ++ F DG + G YF R + S PRE I LE I RP NL RNS Sbjct: 113 RFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGM-YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQ----------GV------------C--------------------------------------------------------------------------------------------------NARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQV-----LVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLRRRRARIP-RSPWRVTQPVEVRFRPDGSLEGTYFDTVPTRGRQTRGGRA--SAPREAIRQYLEQYSIGRPRWNLQRNS 415
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 181 bits (460), Expect = 2.130e-49 Identity = 97/217 (44.70%), Postives = 133/217 (61.29%), Query Frame = 2 Query: 650 HVLFPLRAFQQCV*DARYRIIAWTMNSPGSRNDRTAYKFSAIEKLLNRLPPGYFIVGDAAYPASDRVPGFL*LFPVPVSD---------------RMSVEQTFGILVRTWGILWRPMEVRQLRFAYIVNSIVRLHNFCRDRNVEVPARDDGEVGLPADLSFSEDGCINGDYFKAAQGRSS*PANDQTGLSGPRERIPSKLEVAGIVRPAHNLARNSR 1255 HV+ A+ V DA+YRI+AW MN PGS+NDRTA+ FS +KLL LP G+F+VGDAAY AS+RV + P P + RM++EQT+GILV G+ +E ++VN++VRLHNFCRDR V+VP + G P +++F +DG I+ DYF+ R+ P DQ S PRE I +LEVAG++RP HN+AR+ + Sbjct: 131 HVIARSTAYH-AVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERV-----VVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHK 334
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.940e-41 Identity = 90/206 (43.69%), Postives = 119/206 (57.77%), Query Frame = 2 Query: 680 QCV*DARYRIIAWTMNSPGSRNDRTAYKFSAIEKLLNRLPPGYFIVGDAAYPASDRVPGFL*LFPVPVSD---------------RMSVEQTFGILVRTWGILWRPMEVRQLRFAYIVNSIVRLHNFCRDRNVEVPARDDGEVGLPADLSFSEDGCINGDYFKAAQGRSS*PANDQTGLSGPRERIPSKLEVAGIVRPAHNLARNS 1252 Q V +ARY+I AWTMN PGS NDRTA+K S E++L LP G +IVGD AYPASD+V L P P + R+ +EQ FG +V+TWGILWRP++V+ R + ++N++VRLHNF R +VP + V P ++ F+ DG + G Y+ R P Q +S PRE I L+ I RP NL RNS Sbjct: 152 QAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQV-----LVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNFLRRWRAKVP-QSPWRVDQPQEVRFAPDGSLEGTYYDTVPTRGR-PTTGQR-VSAPREAIRQYLKQYSIGRPRWNLQRNS 349
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 155 bits (393), Expect = 6.630e-39 Identity = 90/207 (43.48%), Postives = 120/207 (57.97%), Query Frame = 2 Query: 680 QCV*DARYRIIAWTMNSPGSRNDRTAYKFSAIEKLLNRLPPGYFIVGDAAYPASDRVPGFL*LFPVPVSD---------------RMSVEQTFGILVRTWGILWRPMEVRQLRFAYIVNSIVRLHNFCRDRNVEVPARDDGEVGLPADLSFSEDGCINGDYFKAA--QGRSS*PANDQTGLSGPRERIPSKLEVAGIVRPAHNLARN 1249 Q + +A Y II WTMN PGS+NDRTA+K S + LL+++PP FIVGDAAYPAS+RV L P P + R+S+EQ FGILV+TW ILW+P+ +R R +++N+IVRLHNF R R V + V +P ++F DG I+G Y+ +GR S A + PRE I L+ + RP NL RN Sbjct: 222 QGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRV-----LVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNFLRRRRAPV-LQSAWNVPMPESVTFHPDGGIDGSYYDTVPTRGRPSKAAE----VCMPREIIRDYLDQKSMGRPRFNLNRN 418
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE) HSP 1 Score: 129 bits (324), Expect = 3.180e-32 Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = 2 Query: 2 RWLAGASMYEGVDGHVIANGTAYQTAYRILQAINACPDMVCKWPNNDGEMAKAARAFRERSSHGVIDKCVGALGGLLIRLIRPTRKEDGESNKYHIGHKTTFGMNFQV 325 RWLAG S+YE +DGHVIA TAY ++ A+NACP++ CKWP + + A+AA FR RSS V+ KCVGA+ L +R+I+P+ KE E N Y+ GHK FGMNFQV Sbjct: 20 RWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV 126
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 132 bits (331), Expect = 5.920e-31 Identity = 111/416 (26.68%), Postives = 148/416 (35.58%), Query Frame = 2 Query: 2 RWLAGASMYEGVDGHVIANGTAYQTAYRILQAINACPDMVCKWPNNDGEMAKAARAFRERSSHGVIDKCVGALGGLLIRLIRPTRKEDGESNKYHIGHKTTFGMNFQVGRREVQKHFGVTVQQHSSFRKQGCTTVSRGLKHEHKVPHS*VSIKG*GAHEVPPN*VHFYSPVVDLNLHYGAEFQSSSSRKGKRRRKRYVLVSYCRWDVTV*SSPETYHVLFPLRAFQQCV*DARYRIIAWTMNSPGSRNDRTAYKFSAIEKLLNRLPPGYFIVGDAAYPASDRVPGFL*LFPVPVSDRMSVEQTFGILVRTWGILWRPMEVRQLRFAYIVNSIVRLHNFCRDRNVEVPARDDGEVGLPADLSFSEDGCINGDYFKAAQGRSS*PANDQTGLSGPRERIPSKLEVAGIVRPAHNLARN 1249 RWLAG S+YE +DGHVIA TAY ++ A+NACP++ CKWP + V+ KCVGA+ GL +R+I+P+ KE E N Y+ GH+ KG VV + YGA S R V+V + PG+ SA + N Y RM++EQT+GILVR WGILWRPMEVR +F ++V +F +DG I+ DYF+ R+ P DQ S PRE I +LEVAG++RP HN+AR+ Sbjct: 117 RWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPE---------------ARMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHR-----------------------------------------------------KG----------------VVVGDAAYGA-----SER---------VVVPF-----------------------------------------PGT-------SLSASQDACNNYVSQY---------------------------RMAIEQTYGILVRRWGILWRPMEVRIEKFEHVV-------------------------------AFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLIRPEHNIARS 328
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Match: A0A6H5KQ54_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ54_9PHAE) HSP 1 Score: 108 bits (269), Expect = 8.890e-23 Identity = 68/208 (32.69%), Postives = 98/208 (47.12%), Query Frame = 2 Query: 680 QCV*DARYRIIAWTMNSPGSRNDRTAYKFSAIEKLLNRLPPGYFIVGDAAYPASDRVPGFL*LFPVPVSD---------------RMSVEQTFGILVRTWGILWRPMEVRQLRFAYIVNSIVRLHNFCRDRNVEVPAR--DDGEVGLPADLSFSEDGCINGDYFKAAQGRSS*PANDQTGLSGPRERIPSKLEVAGIVRPAHNLARNS 1252 Q DA YR + + +PGS ND TA+ S + + LPPG++++GDAAYP SD + L P P R+ +EQ FGILV WGILW+P+ V+ ++ ++ RLHNF RD V R +D EV + D + G + + ++G R+ I L+ RP HNL RN+ Sbjct: 58 QATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHL-----LTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRVQFAGRCDLITALFRLHNFLRDEKVTPIHRSEEDAEV-VQVRPHLLGDKTLPGTFSTTTKTTEDAQKPTRSGEVSTRKGITMMLDNKRQYRPKHNLVRNA 259 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig957.20276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig957.20276.1 >prot_D-dichotoma_M_contig957.20276.1 ID=prot_D-dichotoma_M_contig957.20276.1|Name=mRNA_D-dichotoma_M_contig957.20276.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=142bp MYEGVDGHVIANGTAYQTAYRILQAINACPDMVCKWPNNDGEMAKAARAFback to top mRNA from alignment at D-dichotoma_M_contig957:81466..84258- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig957.20276.1 ID=mRNA_D-dichotoma_M_contig957.20276.1|Name=mRNA_D-dichotoma_M_contig957.20276.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=2793bp|location=Sequence derived from alignment at D-dichotoma_M_contig957:81466..84258- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig957:81466..84258- >mRNA_D-dichotoma_M_contig957.20276.1 ID=mRNA_D-dichotoma_M_contig957.20276.1|Name=mRNA_D-dichotoma_M_contig957.20276.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=852bp|location=Sequence derived from alignment at D-dichotoma_M_contig957:81466..84258- (Dictyota dichotoma ODC1387m male)back to top |