mRNA_D-dichotoma_M_contig946.20180.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig946.20180.1
Unique NamemRNA_D-dichotoma_M_contig946.20180.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Match: A0A6P4ZST3_BRABE (uncharacterized protein LOC109481748 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZST3_BRABE)

HSP 1 Score: 121 bits (303), Expect = 2.850e-25
Identity = 79/235 (33.62%), Postives = 120/235 (51.06%), Query Frame = 2
Query:  953 NGVSNVEDGKHKLETERSLLFTLFALKTGISVAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSFVRRGLRKVVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTWGSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLGLDPVLKAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMKQ*RFM 1657
            NG       K KL      L TL  L+ G+++   ++LF + P   ++  +TWV  L  + +  +  PS   +    P  F  +  R +  ++D TEI  ER  + ++     S YK+  T K+L+GIT  G I  +S+A+GG  SDV I R SG  + +E          IMADRGFP+  D +L+  TL  PP  + G+ Q +++ +     VA LR+HVERAI  +K  R +
Sbjct:  268 NGTPRKRGSKRKLSLREEFLLTLMRLRLGLTINFLAILFGLVPSSCSQIVSTWVRFLSGTLQPLIVWPSRHAISTTLPTQFKNKCSR-IRCIMDCTEIFIERPRNLEMQAATWSDYKKHNTMKVLVGITPNGHISFLSKAYGGRASDVSITRKSGFLDLVEP------NDVIMADRGFPIQEDLLLRHATLQIPPAAQ-GKRQMARNKVKKTKTVANLRIHVERAINRLKDFRIL 494          
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Match: A0A2S2N913_SCHGA (Uncharacterized protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2N913_SCHGA)

HSP 1 Score: 109 bits (273), Expect = 2.570e-23
Identity = 80/228 (35.09%), Postives = 118/228 (51.75%), Query Frame = 2
Query:  968 VEDGKHKLET-ERSLLFTLFALKTGISVAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSFVRRGLRKVVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTWGSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLGLDPVL--KAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMK 1642
            ++D  +  +T E  LL +L  LK GIS    S+ F++     +R     +  L  ++K FV  PS + ++   P SF ++      +++D TEI+TER  H D    + S YK   T K L+GI   G I  VS+A+GG  SD  I   SGL   LE       G  +MAD+GFP G+   +  K   LV PP +  G   F++D +   Y +A +R+HVER+I  +K
Sbjct:    8 IDDQNYSKKTKEVRLLLSLVKLKLGISFTSISIFFNLHRSTCSRIFKNVLKMLAVATKKFVFWPSKKSIVSTLPQSF-KQHYPNCRVIIDCTEIKTERPPHVDQRAFMYSHYKSAFTCKFLVGIAPCGMITFVSKAYGGRASDSFITNDSGLLNLLEP------GDQVMADKGFP-GIKTSVNEKNSILVMPPFMHNGV--FTEDEIIRTYNIASVRIHVERSIQRIK 225          
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Match: A0A8B8EYR9_CRAVI (uncharacterized protein LOC111137789 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EYR9_CRAVI)

HSP 1 Score: 112 bits (281), Expect = 1.180e-22
Identity = 76/232 (32.76%), Postives = 118/232 (50.86%), Query Frame = 2
Query:  980 KHKLETERSLLFTLFALKTGISVAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSFVRRGLRKVVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTWGSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLGLDPVLKAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMKQ*RFMTAKILL 1675
            K KL  E  LL T+  L+  +++   + +F V   + +   +TW+  L +     +  PS +E+ +  P  F + G   V  ++D TE++TER        ++ S YK R T K LI  T  G+   VS+  GG +SDV++VR SGL  K++K         IMAD+GF    D +++   L+ P  LRK + QF+     V   ++  R+HVER IG MK  + +   I L
Sbjct:  229 KRKLSMEDELLMTIMKLRLNLNLEFLASMFQVSVSLVSSVVSTWIILLSKELVPLIHWPSHEELTQYYPQCFEKYGT--VSAIIDCTEVQTERPTLDSANSMMFSNYKGRHTYKALIACTPGGTASYVSQVCGGDMSDVDVVRKSGLLNKIKK------NDKIMADKGFSNKDDFLIEGAQLITPEILRK-DTQFTVAKNVVNAEISNARIHVERVIGRMKDFKILQGPIPL 451          
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Match: UPI00109B9650 (uncharacterized protein LOC114575052 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B9650)

HSP 1 Score: 108 bits (271), Expect = 1.730e-22
Identity = 85/248 (34.27%), Postives = 119/248 (47.98%), Query Frame = 2
Query:  971 EDGKH---------KLETERSLLFTLFALKTGISVAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSFVRRGLRK-VVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTWGSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLGLDPVLKAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMKQ*RFMTAKILLDNW 1684
            EDG H          L  E  L  TL  L+ G +    +  F++     +R   TWVN L+R         S ++V    P SF  +GL   V++VLD TE+E ER    +L     S YK R T K L+GI+  G    VS+A  G +SD +I   SGL EKL K      G +IMADRG+    D + +    +  P+   G+ QF    L     +AR+R+HVER +G +KQ + +   + L  W
Sbjct:   56 EDGLHDRDRCGPRRSLRPEEELFLTLIKLRRGSANEDLAERFNISSSHVSRIFITWVNFLYRLLTTIDIWMSHKKVKRMLPQSF--KGLYDDVIVVLDCTEMECERPSDLELQAATYSSYKSRNTVKGLVGISPNGIPTFVSDAMEGSVSDNDITVKSGLLEKLPK------GCAIMADRGWT-NKDALARQGVRLVTPSFLMGKKQFDLPSLVESVAIARVRIHVERCMGRIKQWKILKHTLPLTEW 294          
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Match: A0A8B6BVR9_MYTGA (THAP-type domain-containing protein n=3 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BVR9_MYTGA)

HSP 1 Score: 110 bits (276), Expect = 6.230e-22
Identity = 75/218 (34.40%), Postives = 107/218 (49.08%), Query Frame = 2
Query:  989 LETERSLLFTLFALKTGISVAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSFVRRGLRKVVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTWGSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLGLDPVLKAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMK 1642
            L+ +  L  TL  L+ G        +F +      R  TTW+N ++   K  VR PS ++VL+  P  F  +  +K   ++D TE   ++        +  S YK   T K L+GIT  GS   +S+ F G +SD +IV+ SG  +K+E       G  IMADRGF +  D  LK  TL  PP    G+ Q   +       +AR R+HVERAIG +K
Sbjct:  264 LDIKEELALTLLRLRRGFDTKTLGDMFAISESSVCRIFTTWLNLMYHDLKFLVRWPSREQVLKKMPKCF--KHFKKTKCIIDCTEFFVQKPSLPSAQRITYSSYKHHNTFKCLVGITPRGSFSFISDLFTGSISDRKIVQDSGFLQKVEY------GDDIMADRGFLIRGDLALKGATLNIPP-FSMGK-QMCANATTKTRRIARARIHVERAIGRLK 471          
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Match: UPI000719AD03 (uncharacterized protein LOC106818335 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719AD03)

HSP 1 Score: 109 bits (273), Expect = 1.890e-21
Identity = 75/236 (31.78%), Postives = 115/236 (48.73%), Query Frame = 2
Query:  935 KLPEVRNGVSNVEDGKHKLETERSLLFTLFALKTGISVAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSFVRRGLRKVVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTWGSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLGLDPVLKAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMK 1642
            K+P     V      K KL  +  +L TL  L+ G+       +F V P + ++   TW+  L    K  +  P+ + VL   PD++ +    K+  ++D TE+  +R    ++     S YK+  T K L+ I   G+I  +SEA+GG  SD  IV+ SG  + +E          +MADRGFP+  D V+K   L+ PP  +  E    +  L     VA +R+HVERAIG +K
Sbjct:  279 KVPRKFKKVPQKPGPKRKLSIKDEMLMTLMKLRLGLGNDFLGDIFLVSPALCSQVLNTWIKFLAYELKPLIYWPAKEVVLRTLPDAY-KTFAPKLRCIIDCTEMFIDRPRDMEMQGHTYSDYKRHNTLKFLVAIAPNGAISYISEAWGGRASDRFIVQESGFLDLIEPTD------EVMADRGFPIKSDLVMKMARLIIPPPGQGAEQMTPEGVLRTKV-VANMRIHVERAIGRLK 506          
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Match: A0A8B8BSN3_CRAVI (uncharacterized protein LOC111112594 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BSN3_CRAVI)

HSP 1 Score: 106 bits (264), Expect = 1.980e-21
Identity = 72/221 (32.58%), Postives = 110/221 (49.77%), Query Frame = 2
Query:  980 KHKLETERSLLFTLFALKTGISVAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSFVRRGLRKVVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTWGSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLGLDPVLKAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMK 1642
            K KL  +      L  LK G+ V   S  F++     ++  TTW+  L     +    PS Q++ +  P SF      ++++  D TE+  E            S YK   T K+L+G++  GS+  VS+ +GG +SD EI + SGL E LE       G ++MADRGF +  D + + +TL  PP  +  ++Q S   +     +A LR+HVERAIG +K
Sbjct:   53 KRKLSLKEEYFMVLIRLKVGLFVRDLSERFEISQSQVSKTFTTWIKFLNAELPLLFLFPSQQKIFDTMPKSFSMYPTTRIII--DCTEVFVEIPSSMLAQSQTWSNYKHHNTYKVLVGVSPTGSVTFVSDLWGGRVSDKEITKQSGLLELLES------GDNVMADRGFEI-FDILPEDVTLNIPP-FKVSDSQLSSKAVEDTVNIASLRIHVERAIGRIK 263          
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Match: A0A8B8C3A6_CRAVI (uncharacterized protein LOC111115133 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8C3A6_CRAVI)

HSP 1 Score: 109 bits (273), Expect = 2.180e-21
Identity = 73/221 (33.03%), Postives = 112/221 (50.68%), Query Frame = 2
Query:  980 KHKLETERSLLFTLFALKTGISVAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSFVRRGLRKVVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTWGSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLGLDPVLKAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMK 1642
            K KL  +      L  LK G+ V   S  F++     ++  TTW+N L     +    PS Q++ +  P SF      ++++  D TE+  E            S YK   T K+L+G++  GS+  VS+ +GG +SD EI + SGL E LE       G ++MADRGF + LD + + +TL  PP  +  ++Q S   +     +A +R+HVERAIG +K
Sbjct:  302 KRKLSLKEEFFMVLIRLKVGLFVRDLSERFEISQSQVSKTFTTWINFLNAELPLLFPFPSQQKIFDTMPKSFSMYPTTRIII--DCTEVFVEIPSSMLAQSQTWSNYKHHNTYKVLVGVSPTGSVTFVSDLWGGRVSDKEITKQSGLLELLES------GDNVMADRGFEI-LDILPEDVTLNIPP-FKGSDSQLSSQAVEDTVNIASVRIHVERAIGRIK 512          
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Match: A0A7M7NNI8_STRPU (THAP-type domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NNI8_STRPU)

HSP 1 Score: 108 bits (269), Expect = 4.780e-21
Identity = 78/224 (34.82%), Postives = 111/224 (49.55%), Query Frame = 2
Query:  986 KLETERSLLFTLFALKTGISVAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSFVRRGLRKVVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTWGSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLGLDPVLKAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMKQ*RFM 1657
            KLE     L  L   + G+     +  F V P   +    TW+N L       V  PS   V  N P +F  +  R V  ++D TEI  ER  +  L  V  S YK+  T KLLIGIT  G I  +S+ + G ++D  IV+ SG    LE         +IMADRGFP+  + +++  +LV PP  ++G+ Q ++  +     VA LR+HVERAI  +K  R +
Sbjct:  262 KLELVDEFLLVLMRCRLGLLNRDLAKRFGVSPASASHIFFTWINFLAEVLGPCVWWPSKDIVRRNLPSAFRTKEYRNVRCIIDCTEIFIERPRNLYLQAVTWSDYKKHNTIKLLIGITPNGLISFLSDIWCGRVTDKHIVQESGFLNLLENQD------TIMADRGFPITEELMMRRASLVIPPG-KRGQEQMTRQQVMQTKKVANLRIHVERAIRRLKSFRII 478          
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Match: UPI000A2A9F1E (uncharacterized protein LOC110247975 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9F1E)

HSP 1 Score: 107 bits (267), Expect = 7.010e-21
Identity = 79/255 (30.98%), Postives = 118/255 (46.27%), Query Frame = 2
Query:  980 KHKLETERSLLFTLFALKTGISVAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSFVRRGLRKVVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTWGSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLGLDPVLKAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMKQ*RFMT-------AKILLDNWTSSAWLCMLSRPL 1723
            + KL  +  +L TL  LK  +   + S LF +   + +    TW+  L +  +  +  P    + +  P S   +G   +   +D +EI  ER    +   +  S YK+  T K L+GI   G I  +S+ +GG  SD  I R SG  +KLE       G  ++ADRGFP+  D ++K  T+  PP    G  Q +++ +     VA  R+HVERAIG MKQ   +          I  D  T +A LC    PL
Sbjct:  237 QRKLTVKDEVLLTLMKLKLALPTELLSDLFMISAGLVSMICNTWMKFLAKELRSMIYWPDRDTIRQKLPRSL--KGYPNLCCTIDCSEIFIERPRDLETQALTWSDYKKHNTIKFLVGIAPNGMISFLSKVWGGRASDQHITRQSGFLDKLEP------GDLVLADRGFPIREDLLIKGSTIKIPPP-SSGIEQMTQENVKATKKVANARIHVERAIGRMKQFALLRNVLPVTLLPIADDIVTVAACLCNFLPPL 482          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig946.20180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P4ZST3_BRABE2.850e-2533.62uncharacterized protein LOC109481748 n=1 Tax=Branc... [more]
A0A2S2N913_SCHGA2.570e-2335.09Uncharacterized protein (Fragment) n=1 Tax=Schizap... [more]
A0A8B8EYR9_CRAVI1.180e-2232.76uncharacterized protein LOC111137789 n=1 Tax=Crass... [more]
UPI00109B96501.730e-2234.27uncharacterized protein LOC114575052 n=1 Tax=Exaip... [more]
A0A8B6BVR9_MYTGA6.230e-2234.40THAP-type domain-containing protein n=3 Tax=Mytilu... [more]
UPI000719AD031.890e-2131.78uncharacterized protein LOC106818335 n=1 Tax=Priap... [more]
A0A8B8BSN3_CRAVI1.980e-2132.58uncharacterized protein LOC111112594 n=1 Tax=Crass... [more]
A0A8B8C3A6_CRAVI2.180e-2133.03uncharacterized protein LOC111115133 n=2 Tax=Crass... [more]
A0A7M7NNI8_STRPU4.780e-2134.82THAP-type domain-containing protein n=1 Tax=Strong... [more]
UPI000A2A9F1E7.010e-2130.98uncharacterized protein LOC110247975 n=1 Tax=Exaip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig946contigD-dichotoma_M_contig946:32934..35515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score110.2
Seed ortholog evalue1.5e-21
Seed eggNOG ortholog7029.ACYPI000412-PA
EggNOG free text desc.Helix-turn-helix of DDE superfamily endonuclease
EggNOG OGs28TD2@1,2R03G@2759,39UG8@33154,3BMFJ@33208,3D3U0@33213
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size2100
Cds size753
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig946.20180.1prot_D-dichotoma_M_contig946.20180.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig946 33417..34169 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931195.3096197-UTR-D-dichotoma_M_contig946:32933..332071622931195.3096197-UTR-D-dichotoma_M_contig946:32933..33207Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig946 32934..33207 -
1690799659.3712559-UTR-D-dichotoma_M_contig946:32933..332071690799659.3712559-UTR-D-dichotoma_M_contig946:32933..33207Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig946 32934..33207 -
1622931195.332218-UTR-D-dichotoma_M_contig946:33238..334161622931195.332218-UTR-D-dichotoma_M_contig946:33238..33416Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig946 33239..33416 -
1690799659.384476-UTR-D-dichotoma_M_contig946:33238..334161690799659.384476-UTR-D-dichotoma_M_contig946:33238..33416Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig946 33239..33416 -
1622931195.359861-UTR-D-dichotoma_M_contig946:34169..341941622931195.359861-UTR-D-dichotoma_M_contig946:34169..34194Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig946 34170..34194 -
1690799659.4036443-UTR-D-dichotoma_M_contig946:34169..341941690799659.4036443-UTR-D-dichotoma_M_contig946:34169..34194Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig946 34170..34194 -
1622931195.3740923-UTR-D-dichotoma_M_contig946:34645..355151622931195.3740923-UTR-D-dichotoma_M_contig946:34645..35515Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig946 34646..35515 -
1690799659.434687-UTR-D-dichotoma_M_contig946:34645..355151690799659.434687-UTR-D-dichotoma_M_contig946:34645..35515Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig946 34646..35515 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931195.3459969-CDS-D-dichotoma_M_contig946:33416..341691622931195.3459969-CDS-D-dichotoma_M_contig946:33416..34169Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig946 33417..34169 -
1690799659.3938937-CDS-D-dichotoma_M_contig946:33416..341691690799659.3938937-CDS-D-dichotoma_M_contig946:33416..34169Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig946 33417..34169 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig946.20180.1

>prot_D-dichotoma_M_contig946.20180.1 ID=prot_D-dichotoma_M_contig946.20180.1|Name=mRNA_D-dichotoma_M_contig946.20180.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=251bp
MELLTTSCTMATPKLPEVRNGVSNVEDGKHKLETERSLLFTLFALKTGIS
VAVASVLFDVGPPVGTRCSTTWVNSLWRSSKVFVRLPSPQEVLENAPDSF
VRRGLRKVVLVLDRTEIETERHWHTDLAHVLRSPYKQRPTAKLLIGITTW
GSICVVSEAFGGHLSDVEIVRTSGLTEKLEKLGFCGKGYSIMADRGFPLG
LDPVLKAMTLVGPPTLRKGEAQFSKDYLHVPYGVARLRVHVERAIGAMKQ
*
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mRNA from alignment at D-dichotoma_M_contig946:32934..35515-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig946.20180.1 ID=mRNA_D-dichotoma_M_contig946.20180.1|Name=mRNA_D-dichotoma_M_contig946.20180.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=2582bp|location=Sequence derived from alignment at D-dichotoma_M_contig946:32934..35515- (Dictyota dichotoma ODC1387m male)
CCCAAAGACCGAATCTCAAGTTTTCAGGACAAGAGATCAAGACTACGTAC GTAATCTGTGACCATAGGGTAGTTTTCTGGGAACCAAATTCAATGGGATC AACTCCAACACCAGCGACCACCCGAACTCAAATCTGTAGTTGCATTCCGC AATTCAATCAGAAAGAAAAACCAAAACGACACGGACGCGAGCAGTCGAAT ACCGAAAACCAATGTGGGCAAAGCACCAAGCGTGATTACCCGAATCAAAA CCGGATGCTTGAGGAATTTAGGGAATCGTGTATTACGAGCTTCGAAACTA CACAGGAAACCAAACGCGAGCAAAAGATCGCAGAGGCAAACCTCGCTTGA GATCTGCTGAGTGCCGAATAAAGTTGCCAAGACCAAACAAGGTAGTCTTA AGACTCCGCGCTGAAGCCAAATTTCCGGCTTTCAGATTATGCGCGTGTAC CCACTCGAAGGGCAGAGGTGCGTCTCACTCAACTCGAAGACTGGTGCCAA AAGGAAGGATACGAGCCGACTATAATACTTCCCCAAGACAGCGAGACGAG AGAAGAGTGGCTCAAGATGTTGAAGGTTGATCCAGCTACACTTGTTTTGA AAAATGGTCGCGTAGGCGCACTGGATTTCTCACCCTCGGACCTGGAGGTG AAGACCCACATGGGAAAATTTCGTCAGGTTCAGAGAGCGAAGCTTGCGGA ACCATATAAATATGCAGAGGAGATTATGAGAAGGCCGAAGCAGGCCGTGT ACAGGGAATTCCGGGCGGAGTTATCGGGTCTTGCGTTGGAAGAGGCGTGG CAGAAGGAGATAATTGCCCATCACGAGACGGGTCTCGCCCGTGACGCTGC GAAGACAAAGGTCTCCAGTGGTGAGAAGAAAGATTATTCTGACGCTTTTA TCTCTGTGGAAAGCCTTTCCAGAATGTCACTAATCGAGGTTTCTTCGCTC ACCGGCATGCCGAGATTCGAGTGCTGGAGGGTGAGTGGCAAGCTGTTTCC AGATGTACTGTGCTAAAGGCCATTCGAATAGCGGACGTGTTTCTCGTCCA GCGGATTAGGTTGAAACAGAGCAATGCGATGTTGTTTGGGTGTCTTTAGT TTGTGATGAGCATGGCAGTCGTTAGTATCATATACAGTATTGCATAGGTT GTCACAGCCGGAAGCAGGTATTTACGCTACATCATTGCTGCAACCGGCTG AGGAATCCGCAAGAGTTGGTTGACGTCTTTCGTGTTGTAAATCAGGACTT CGTTTTCGTCACGCGTAGACGACAGAGGATGGTTCATGTTGGTGTACCCG CGCAAATCGTGTATCCCGCAGGAATTCTACAACATCCTTAACATCGATGG AATTGCTGACAACCTCTTGTACTATGGCGACCCCAAAGCTGCCGGAGGTA CGGAACGGAGTATCCAACGTAGAAGACGGAAAGCACAAACTGGAGACCGA GAGGAGCCTTTTGTTCACGCTCTTCGCGTTGAAAACAGGCATTTCAGTCG CCGTGGCGTCCGTCTTGTTTGATGTGGGCCCACCGGTTGGGACAAGGTGT TCAACAACGTGGGTGAATTCCTTGTGGCGCTCGAGCAAGGTGTTTGTTCG CTTACCCTCGCCGCAGGAAGTTTTGGAAAACGCACCTGATTCGTTCGTCA GGCGTGGTCTGCGAAAGGTTGTCCTGGTTCTCGATAGAACTGAAATCGAG ACCGAGCGGCACTGGCATACAGACCTTGCCCACGTCCTGCGGTCTCCTTA CAAGCAAAGACCAACGGCGAAGCTACTGATTGGTATTACGACGTGGGGTA GTATATGTGTCGTTTCGGAAGCCTTTGGGGGGCATCTCAGCGATGTCGAG ATCGTACGAACATCTGGACTTACTGAGAAACTAGAAAAGCTGGGGTTTTG TGGTAAGGGTTATTCCATTATGGCGGATCGAGGATTTCCTCTTGGTTTAG ATCCTGTACTCAAGGCTATGACTCTGGTTGGGCCACCTACGCTTCGCAAG GGTGAAGCCCAATTCTCGAAAGATTATTTACATGTGCCATACGGTGTGGC GCGCCTCCGCGTCCATGTAGAGCGTGCCATAGGAGCGATGAAACAGTGAC GTTTTATGACGGCAAAAATCCTTTTAGACAACTGGACCTCCTCGGCATGG CTGTGCATGCTATCGCGGCCATTGTCAACTTGACCAATGCTGGATTAGTA TTCCGAACGCACGTATCACATGGAGGTCGTCCACGGGAAGTAGAGGGTAG TGAACCATGGAATGACGATCCATATGACGAGGAGTGTTAGGTCCGCTAGG GTTTACTCATATGCCCGCCAGAGACACTACAGTTGACACAGTATCACGTG TCGCGGGTTACGTAAGATGCATTCGCTGCCTCTATTTACTCCCCCCGGGA TACAAGTGGTGACATGGTGTTTCGTTGCGCCAGCTTTGCTGTGTAACTTT ACCTGGGACGGGGAAGGTCATGGTGTGTGGGAGTTGTGGCCCTGCGATCT GAGGCAACGGAAGTGCGGTCTTCGTCACTGCGATGTATAATGCGCCGATA TGTTTTACTTAGCATGGATCATGATAAATGGC
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig946:32934..35515-

>mRNA_D-dichotoma_M_contig946.20180.1 ID=mRNA_D-dichotoma_M_contig946.20180.1|Name=mRNA_D-dichotoma_M_contig946.20180.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1506bp|location=Sequence derived from alignment at D-dichotoma_M_contig946:32934..35515- (Dictyota dichotoma ODC1387m male)
ATGGAATTGCTGACAACCTCTTGTACTATGGCGACCCCAAAGCTGCCGGA
GGTACGGAACGGAGTATCCAACGTAGAAGACGGAAAGCACAAACTGGAGA
CCGAGAGGAGCCTTTTGTTCACGCTCTTCGCGTTGAAAACAGGCATTTCA
GTCGCCGTGGCGTCCGTCTTGTTTGATGTGGGCCCACCGGTTGGGACAAG
GTGTTCAACAACGTGGGTGAATTCCTTGTGGCGCTCGAGCAAGGTGTTTG
TTCGCTTACCCTCGCCGCAGGAAGTTTTGGAAAACGCACCTGATTCGTTC
GTCAGGCGTGGTCTGCGAAAGGTTGTCCTGGTTCTCGATAGAACTGAAAT
CGAGACCGAGCGGCACTGGCATACAGACCTTGCCCACGTCCTGCGGTCTC
CTTACAAGCAAAGACCAACGGCGAAGCTACTGATTGGTATTACGACGTGG
GGTAGTATATGTGTCGTTTCGGAAGCCTTTGGGGGGCATCTCAGCGATGT
CGAGATCGTACGAACATCTGGACTTACTGAGAAACTAGAAAAGCTGGGGT
TTTGTGGTAAGGGTTATTCCATTATGGCGGATCGAGGATTTCCTCTTGGT
TTAGATCCTGTACTCAAGGCTATGACTCTGGTTGGGCCACCTACGCTTCG
CAAGGGTGAAGCCCAATTCTCGAAAGATTATTTACATGTGCCATACGGTG
TGGCGCGCCTCCGCGTCCATGTAGAGCGTGCCATAGGAGCGATGAAACAG
TGAATGGAATTGCTGACAACCTCTTGTACTATGGCGACCCCAAAGCTGCC
GGAGGTACGGAACGGAGTATCCAACGTAGAAGACGGAAAGCACAAACTGG
AGACCGAGAGGAGCCTTTTGTTCACGCTCTTCGCGTTGAAAACAGGCATT
TCAGTCGCCGTGGCGTCCGTCTTGTTTGATGTGGGCCCACCGGTTGGGAC
AAGGTGTTCAACAACGTGGGTGAATTCCTTGTGGCGCTCGAGCAAGGTGT
TTGTTCGCTTACCCTCGCCGCAGGAAGTTTTGGAAAACGCACCTGATTCG
TTCGTCAGGCGTGGTCTGCGAAAGGTTGTCCTGGTTCTCGATAGAACTGA
AATCGAGACCGAGCGGCACTGGCATACAGACCTTGCCCACGTCCTGCGGT
CTCCTTACAAGCAAAGACCAACGGCGAAGCTACTGATTGGTATTACGACG
TGGGGTAGTATATGTGTCGTTTCGGAAGCCTTTGGGGGGCATCTCAGCGA
TGTCGAGATCGTACGAACATCTGGACTTACTGAGAAACTAGAAAAGCTGG
GGTTTTGTGGTAAGGGTTATTCCATTATGGCGGATCGAGGATTTCCTCTT
GGTTTAGATCCTGTACTCAAGGCTATGACTCTGGTTGGGCCACCTACGCT
TCGCAAGGGTGAAGCCCAATTCTCGAAAGATTATTTACATGTGCCATACG
GTGTGGCGCGCCTCCGCGTCCATGTAGAGCGTGCCATAGGAGCGATGAAA
CAGTGA
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