mRNA_D-dichotoma_M_contig931.20058.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig931.20058.1
Unique NamemRNA_D-dichotoma_M_contig931.20058.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 1.260e-59
Identity = 146/500 (29.20%), Postives = 228/500 (45.60%), Query Frame = 1
Query:    1 PHNHVEALQSPSAQGWKAATMSELASLSENKVESPVEATSVPPHTKVIGTRWVFSVKPDGRFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVANNFGWKIEQFDA-------------------------------------------------WNQTADQALKEMGWTATSYGPCLYQRGQGDQYALFVLYVDDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQIIDQTSYVQEMFGRFDM-----INSKGIDIPIIREQEHKGENKPLDGT-------ELMYLSTYTSFDITYATWRLAKRMSGATQWDLASAKRVLRYLKGRTDLTITFRRGEFALKGYCDVSYCQPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESELVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIAETTRHGSRTKHLTVSLRRIMDNMKSTHIKMTFVRGHLQKSDCLTKTL 1317
            P+ + EA+ SP  + WK A   E+ +L ++ V + V  +SVP   K++GT++VF  K DGRFKA+L+  G+R       G   +PVC   S ++  A+  +  W I Q D                                                  WN T D++L   GW  T   PC+Y    G+   +  +YVDD LIT   ++  + Q KK L  RF++  +G     L + ++R+ E G   I Q  YV  +  RF M     +++ G    I   Q       P D          ++YL+  T FD++YA  +L+K  S   Q ++ +AK VLRYL+G   L I ++RG+F L  + D S+     N +S TGY   + G  + + AK +++TA +T E+E+ AL    +E  ++ N + EL  +    VP+  D+  A  +A    H  RTKH+T+    I + +    I +       Q +D  TK L
Sbjct:  342 PNTYDEAMSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQ-LVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYL 840          
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 2.010e-58
Identity = 140/501 (27.94%), Postives = 233/501 (46.51%), Query Frame = 1
Query:    1 PHNHVEALQSPSAQGWKAATMSELASLSENKVESPVEATSVPPHTKVIGTRWVFSVKPDGRFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVANNFGWKIEQFDA-------------------------------------------------WNQTADQALKEMGWTATSYGPCLYQRGQGDQYALFVLYVDDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQIIDQTSYVQEMFGRFDM-----INSKGIDIPIIREQ--------EHKGENKPLDGTELMYLSTYTSFDITYATWRLAKRMSGATQWDLASAKRVLRYLKGRTDLTITFRRGEFALKGYCDVSYCQPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESELVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIAETTRHGSRTKHLTVSLRRIMDNMKSTHIKMTFVRGHLQKSDCLTKTL 1317
            P  + EA+ SP  + WK+A  +E+ +L+++KV   V  + VP    +  TR+VF +K D RFKA+L+A G+R R     G   +PV    S +++ A+A   GW++ Q D                                                  WN   +  L   GW  T   PC+Y    GD+  +  +YVDD LIT   KE  + + KK L   F++  +G     + ++++R+ E G   I Q  Y +++  R+ M     +++ G  + +  EQ        E K   + + G+ L+YL+  T +D++YA  +L +  +   Q  +A+AK +LRYL+G  DL I +++G+F L  + D S+     N +S TGY   + G  + + AK +++ A NT E+EL AL    +E  ++ N + E+G +    VP+  D+  A  +A      SRTKH+ +    + +  K   I +         +D  TK L
Sbjct:  219 PSTYTEAMNSPQREQWKSAIDTEMGNLAKHKVFKKVRISLVPKDEDIFDTRFVFKIKADSRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEI-VSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGS-LLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHL 717          
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Match: A0A5C3ERV5_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3ERV5_9BASI)

HSP 1 Score: 207 bits (528), Expect = 1.060e-55
Identity = 149/488 (30.53%), Postives = 250/488 (51.23%), Query Frame = 1
Query:   46 WKAATMSELASLSENKVESPVEATSVPPHT-KVIGTRWVFSVK--PDG---RFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVANNFGWKIEQFDA------------------------------------------WNQTADQALKEMGWTATSYGPCLYQRGQ-GDQYALFVLYVDDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQIIDQTSYVQEMFGRFDMINSKGIDIPI-----------IREQEHKGENKPLDGTELMYLSTYTSFDITYATWRLAKRMSGATQWDLASAKRVLRYLKGRTDLTITFRRG---EFALKGYCDVSYCQPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESELVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIAETTRHGSRTKHLTVSLRRIMDNMKSTHIKMTFVRGHLQKSDCLTKTLG 1320
            WK A   EL S  EN      E TS P     V+  +WV+ +K  PDG   ++KA+L+A+G+  R  +   +  +PV    + +I++A+A + G K+EQ D                                           W +  D++L++MG+T  +    +Y+ G       +  +YVDD ++ ++T+ED + + K+ L  RFK+   G     L L+I  N +     + Q++Y + M  +F + ++K    P+           + EQ+HK + + + G+ L+Y ST T  DI+YAT RL+K +   TQ  + SA  +LRYLKG  ++ I F +G      L+GY D  +     ++KS TG   ++ G+PV+ ++K++ + A +TT ++ +A+   VK++ + R+LL ELG++Q SP  +  DNAAA  +A   +  SRTKH+ V    I +++ +  +K+  V    QK+DCLTKTLG
Sbjct:  372 WKEAMDKELESHREN---GTWEVTSKPTSDGHVVDCKWVYKLKINPDGSLDKYKARLVARGFTQREGIDYEETFAPVLKFSTLRILIALATSLGLKMEQMDVVTAFLNGVITEDIFMKPPPGYWEGKTLKLKKALYGLKQAGRKWYERLDESLRDMGFTRIASDFGVYKIGTLAKSLCIIAVYVDDIVLVTRTQED-MDKYKRELTRRFKMTEGGKLKYILGLEITWNTDS--TKLSQSAYTRRMVDKFLVESAKPAATPLPLKEFDSDVEPLNEQDHK-KYRMIVGS-LLYASTGTRPDISYATSRLSKHLENPTQASMKSAMHLLRYLKGTQNVGIHFTKGMTTSTVLEGYSDADFAGDTQDRKSTTGIVTIVYGSPVNWFSKKQPLVADSTTVAKYIAMTESVKDIIWTRSLLDELGLRQYSPTNIHVDNAAARQLAADPKFHSRTKHIDVKFHFIREHVGNNKVKIVPVTTLQQKADCLTKTLG 851          
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 2.370e-54
Identity = 136/474 (28.69%), Postives = 211/474 (44.51%), Query Frame = 1
Query:   79 LSENKVESPVEATSVPPHTKVIGTRWVFSVKPDGRFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVANNFGWKIEQFDA-------------------------------------------------WNQTADQALKEMGWTATSYGPCLYQRGQGDQYALFVLYVDDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQIIDQTSYVQEMFGRFDM-----INSKGIDIPIIREQEHKGENKPLDGT-------ELMYLSTYTSFDITYATWRLAKRMSGATQWDLASAKRVLRYLKGRTDLTITFRRGEFALKGYCDVSYCQPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESELVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIAETTRHGSRTKHLTVSLRRIMDNMKSTHIKMTFVRGHLQKSDCLTKTL 1317
            L ++ V + V  +SVP   K++GT++VF  K DGRFKA+L+  G+R       G   +PVC   S ++  A+  +  W I Q D                                                  WN T D++L   GW  T   PC+Y    G+   +  +YVDD LIT   ++  + Q KK L  RF++  +G     L + ++R+ E G   I Q  YV     RF M     +++ G    I   Q       P D          ++YL+  T FD++YA  +L+K  S   Q ++ +AK VLRYL+G   L I ++RG+F L  + D S+     N +S TGY   + G  + + AK +++TA +T E+E+ AL    +E  ++ N + EL  +    VP+  D+  A  +A    H  RTKH+ +    I + +    I +       Q +D  TK L
Sbjct:    4 LRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQ-LVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYL 476          
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 200 bits (509), Expect = 1.520e-53
Identity = 139/502 (27.69%), Postives = 237/502 (47.21%), Query Frame = 1
Query:    1 PHNHVEALQSPSAQGWKAATMSELASLSENKVESPVEATSVPPHTKVIGTRWVFSVKPDG-----RFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVANNFGWKIEQFDA----------------------------------------------WNQTADQALKEMGWTATSYGPCLYQRGQGDQYALFVLYVDDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQIIDQTSYVQEMFGRFDMINSKGIDIPI---IREQEHKGENKPLDGTE-------LMYLSTYTSFDITYATWRLAKRMSGATQWDLASAKRVLRYLKGRTDLTITFRRGE-FALKGYCDVSYCQPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESELVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIAETTRHGSRTKHLTVSLRRIMDNMKSTHIKMTFVRGHLQKSDCLTKTLG 1320
            P    + L SP    WK A   E+ SL  N V + VE   +P   K +G++WVF VK D      R KA+L+AQG+  +F     +  SPV   +S + ++A A  +G K+ Q D                                               WN   D+ LK+MG+  T+  PC+Y    G+ + + V YVDD L+     +  + ++KK L   F+IK +G  ++FL +KI +  E G   + Q +Y + +  +F M NSK +  P+    +  +H  +++ +D  +       L+YLST T  DI YA   +A+  +  T+    + KR++RYLKG  +L + + + +     G+ D  +   + ++KS++GY   I GA V   +K+++  A++T E+E +AL S  +E  ++R L+ +L + Q  P  +  DN +A  +A+ ++   R KH+ +    I + +    I + +       +D  TK L 
Sbjct:  237 PKTVKDVLSSPDKAKWKEAMEKEMESLYANNVWNLVE---LPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKEHLVCKLNRSIYGLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTAATGEMFIIAV-YVDDILLAG-CSDKRMMEVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKFGMENSKPVSTPVDINTKLVKHSDDSEVMDPKQFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKGTLNLGLLYNKDKPKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTKGLS 733          
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 5.540e-53
Identity = 131/453 (28.92%), Postives = 205/453 (45.25%), Query Frame = 1
Query:    1 PHNHVEALQSPSAQGWKAATMSELASLSENKVESPVEATSVPPHTKVIGTRWVFSVKPDGRFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVANNFGWKIEQFDA-------------------------------------------------WNQTADQALKEMGWTATSYGPCLYQRGQGDQYALFVLYVDDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQIIDQTSYVQEMFGRFDM-----INSKGIDIPIIREQEHKGENKPLDGT-------ELMYLSTYTSFDITYATWRLAKRMSGATQWDLASAKRVLRYLKGRTDLTITFRRGEFALKGYCDVSYCQPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESELVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIA 1176
            P+   EA+ SP  + WK   + E+ +L ++ V + V  +SVP   +++GT++VF  K DGRFKA L+  G+R       G   +PVC   S ++   +  +  W I Q D                                                  WN T +++LK  GW  T Y PC+Y    G+   +  +YVDD LIT   ++  L   KK L  RF++  +G     L + ++R+ E G   I Q  YV  +  RF M     +++ G    I   Q       P D          ++YL+  T FD++YA  +L+K  S   Q +L +AK VLRYL+G   L I ++RG+F L    D S+     N +S TGY   + G  + + AK +++TA +T E+E+ AL    +E  ++ N + E   +    VP+  D+  A  +A
Sbjct:   79 PNTCDEAMSSPQREEWKGECIKEMDNLRKHNVYNLVPLSSVPKGEEILGTKFVFKKKLDGRFKAHLVVGGHRQEPGQDYGSSYAPVCRIGSIRMTCTIGCHNNWPIYQLDVVVAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLNESLKVFGWKRTQYDPCVYMYTSGNIIVILTVYVDDILITGGDQQ--LVDQKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTRSILYLAQCTRFDLSYAALQLSKACSNPAQVNLTAAKHVLRYLRGNPVLPIVYKRGQFWLAASTDSSFGANLDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSFSAREAIYISNFMTEFNFKTFGWVPINSDSTGALTVA 529          
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Match: A0A182G9Y4_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G9Y4_AEDAL)

HSP 1 Score: 191 bits (485), Expect = 1.120e-51
Identity = 142/499 (28.46%), Postives = 233/499 (46.69%), Query Frame = 1
Query:    1 PHNHVEALQSPSAQGWKAATMSELASLSENKVESPVEATSVPPHTKVIGTRWVFSVKPD-----GRFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVANNFGWKIEQFD--------------------------------------------AWNQTADQALKEMGWTATSYGPCLYQRGQGDQYALFVLYVDDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQIIDQTSYVQEMFGRFDMINSKGIDIPII-REQEHKGEN--------KPLDGTELMYLSTYTSFDITYATWRLAKRMSGATQWDLASAKRVLRYLKGRTDLTITFRRGEFA--LKGYCDVSYCQPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESELVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIAETTRHGSRTKHLTVSLRRIMDNMKSTHIKMTFVRGHLQKSDCLTKTL 1317
            P    E  + P    WK A   E+ +L +NK  +    T +P     I  +WVF +KP       R+KA+L+A+G+  RF     +  SPV   D+ +I+LA+AN     I Q D                                            AWN    + + ++G+  T+   CLY RG+G Q    +LYVDD L+     ++ L  +KK L   F +K  G  S+FL +KIER+ E  +  I Q  Y+Q++  RF+M   K   +P+  R +  KGE         + L G  LMY++  T  D++      ++     T+      KRVLRY+KG  D+ + ++  + A  L  +CD  +     +++SV+GY   + G       +++   ++++TE+++VAL     E  ++  LL ELG+Q  +PVP   DN +A  + E  R  S+ KH+ V    + + +++  I++ +V    Q++D LTK L
Sbjct:    8 PSTVAELKKRPDWPKWKIAIEEEMDALMKNKTWT---LTKLPEGQHAITCKWVFRIKPGEGREPDRYKARLVARGFSQRFGFDYTETYSPVAKVDTLRIMLALANQERMLIHQMDVRTAFLNGDLTEEIFMVQPEGFERGDGLVCRLNRSLYGLKQASKAWNDRFHRVITKLGFRRTNADQCLYVRGEGRQKVFLILYVDDVLVIGHELKEILA-VKKSLSKEFDMKDSGEVSSFLGMKIERDIEGRVLRISQQRYLQDLLARFNMSECKPSSVPMENRLRLEKGEESQRTSQPYRELIGC-LMYVALITRPDLSATVNYFSQFQGCPTEQHWTFLKRVLRYVKGTIDVGLEYQGKDSAPLLVAFCDADWANDVADRRSVSGYLFKVYGCTTIWATRKQRTVSLSSTEADMVALCEATCEGVWIVRLLKELGLQIKAPVPYFEDNQSAIRVMEEPRDRSKLKHIDVKHNFVKELVQNGSIELKYVPSERQEADILTKGL 501          
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 187 bits (474), Expect = 4.050e-50
Identity = 138/492 (28.05%), Postives = 233/492 (47.36%), Query Frame = 1
Query:   22 LQSPSAQGWKAATMSELASLSENKVESPVEATSVPPHTKVIGTRWVFSVKPDG-----RFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVANNFGWKIEQFDA---------------------------------------------WNQTADQALKEMGWTATSYGPCLYQRGQGDQYALFVLYVDDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQIIDQTSYVQEMFGRFDMINSKGIDIPI----IREQEHK------GENKPLDGTELMYLSTYTSFDITYATWRLAKRMSGATQWDLASAKRVLRYLKGRTDLTITFRRGEFALKGYCDVSYCQPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESELVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIAETTRHGSRTKHLTVSLRRIMDNMKSTHIKMTFVRGHLQKSDCLTKTL 1317
            ++ P A+ WKAA   E+ SL EN      + T +PP  K +G +W+F  K D      R+KA+L+AQG+  +F     +V +PV    + +++L VA+  G  ++  D                                              WN+  DQ LK M +  +   PCLY R  G  Y   V+YVDD +I     E+  ++I K L   FK+  LG  S+FL +KI RN++ G  +  QT Y++++  +F M  +K    P+    I+++E +       +   L G+ L+Y++  T  DI  +   L + +S  TQ D   AKR+LRYLK   D  +   +GE  L+ Y D  +     ++KS +GY  +  G P+   +++++  A+++TE+E VAL +  +E+ ++  LL +  +    P+ +  DN +     E+ R  +R+KH+      +   ++   I+M +       +D LTK L
Sbjct:    1 MKGPEAELWKAAMDDEMTSLREN---GTWQLTDLPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDAVCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYLVIYVDDMVIACNDDEE-YEEIIKTLNRHFKVTSLGDISHFLGIKINRNEK-GFSLSQQT-YIKQILEQFGMNQAKPSKYPLDPGHIQQKEEQVMLPNNHQYASLIGS-LLYVAVNTRPDIAVSVSILGRSVSAPTQADWNEAKRILRYLKLTMDHELVLGQGERNLEVYVDADWANDVKSRKSNSGYLFLFGGGPICWGSRKQTCVALSSTEAEFVALAASCQELLWIDRLLTDFSVDIIKPILIHEDNQSCIKQMESGRATNRSKHVDTKYHFVYQLLEQGMIRMQYCPTDQMIADMLTKPL 485          
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Match: A0A4P6XI96_9ASCO (Integrase core domain-containing protein n=1 Tax=Metschnikowia aff. pulcherrima TaxID=2163413 RepID=A0A4P6XI96_9ASCO)

HSP 1 Score: 189 bits (481), Expect = 7.380e-49
Identity = 136/505 (26.93%), Postives = 233/505 (46.14%), Query Frame = 1
Query:    1 PHNHVEALQSPSAQGWKAATMSELASLSENKVESPVEATSVPPHTKVIGTRWVFSVKPDGRFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVANNFGWKIEQFDA---------------------------------------------------WNQTADQALKEMGWTATSYGPCLYQRGQGDQYALFVLYVDDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQIIDQTSYVQEMFGRFDMINSKGIDIPIIREQ---EHKGENKPLDGTE-------LMYLSTYTSFDITYATWRLAKRMSGATQWDLASAKRVLRYL-KGRTDLTITFRRGEFALKGYCDVSYC-QPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESELVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIAETTRHGSR---TKHLTVSLRRIMDNMKSTHIKMTFVRGHLQKSDCLTKTL 1317
            P+++ EA +SP    WK A  +E+A+   N    PV  T+     K IG RWVF++K D R+KA+L+A+GY     +   +  SPV   DS +++ A+A      I   D                                                    WN+T ++   + G+      PC+Y +G+G    L  +YVDD LI    ++  + ++KK L  RF++K LGP   FL + +    +   +++    Y+  +   + M+N  G++IPI  +      + +N+P D  E       L+Y +    FDI Y   RL++ +S   +  + +AKRV+RYL K RT   +     +  L  +CD ++  + + + +S TG  +     PV   +K +++ AV+T  SELV+L     E  +++NLL ELG+     +  LCDN  A    +T ++GS    +KH+ V    +  N++  ++ ++++      +D  TK L
Sbjct: 1205 PNSYTEAKRSPEWDKWKKACEAEIAAHIRNGTFKPVRKTA---DIKPIGCRWVFAIKDDERYKARLVARGYTQVEGIDYAETFSPVIKQDSIRLIFAIAAKLKMSIHHIDVLTAFLYGTLEEDIYMIQPPGFRFTPDGQKDDGEYVLKLQKSLYGLKQSPLVWNETLNEEFLKQGFKRAINEPCIYYKGEGKNALLVGVYVDDMLIVGANQKQ-IDKVKKDLSNRFEMKDLGPVKKFLGINVLHGKDF--RVLHLGDYIDSILRDYGMLNCNGVNIPIPPKDLDANLEDDNEPCDQKEYRSIIGKLLYAANCVRFDINYVVLRLSRYLSDPREKHMRAAKRVIRYLLKTRTYGIVCLSNSQKELTCFCDANFASESDADCRSTTGSFITYADIPVSWKSKLQTMVAVSTLNSELVSLFYTTCEAVWLQNLLAELGLSNNCYI--LCDNQGAI---KTIKNGSLLQGSKHIRVKAHFVKQNVELRNMSLSYISTKDNVADIFTKAL 1698          
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Match: B5RUQ6_DEBHA (DEHA2G11297p n=1 Tax=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) TaxID=284592 RepID=B5RUQ6_DEBHA)

HSP 1 Score: 188 bits (477), Expect = 2.380e-48
Identity = 145/494 (29.35%), Postives = 232/494 (46.96%), Query Frame = 1
Query:    1 PHNHVEALQSPSAQGWKAATMSELASLSENKVESPVEATSVPPHTKVIGTRWVFSVKPDGRFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVANNFGWKIEQFDA----------------------------------------------WNQTADQALKEMGWTATSYGPCLYQRGQGDQYALFVLYVDDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQIIDQTSYVQEMFGRFDMINSKGIDIPIIREQE-HKGENKPLDGT-------ELMYLSTYTSFDITYATWRLAKRMSGATQWDLASAKRVLRYLKGRTDLTITFRRGEFALKGYCDVSYCQPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESELVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIAETTRHGSRTKHLTVSLRRIMDNMKSTHIKMTFVRGHLQKSDCLTKTLG 1320
            P  + +A+ S  A+ WK A  SE+++   N     V   S+P   K IG RWVF+ K DGR+KA+L+AQG+         D  SPV   +S K++LA +      + Q D                                               WN T    L E  +        +Y RG      +  LYVDD LI+ K  ++ ++ +KK L  +FK+K LG A  FL + I + D  GI+I     Y+ ++   FDM ++  +  P +  ++ HK + +  D T       +L++ ST    DI YA   L++ ++  ++  +  AK VLRYLKG  D+   +  G+ +L  YCD  +   + ++KS+TGY V   GAP+   +K+++  A++TTE+E +AL    KE  ++  L  E+ +    P+ +  DN +   +AE     SRTKH+ +    I +++    IK+  +  H Q +D LTK L 
Sbjct:  984 PVTYKQAMVSDEAEKWKFAMDSEMSAHYSNNTWDLV---SLPKDRKAIGNRWVFTKKDDGRYKARLVAQGFSQVPGEDYLDTFSPVIRYESVKLLLAFSAVDNRVVHQMDVDTAFLNGTVEETLYMKQPVDFINENEPEKVCKLNKSLYGLKQAPICWNTTISDFLAEHRFNRIDTELGIYVRGN----IIIGLYVDDILISGKDIKE-IEDVKKMLASKFKMKDLGVAKKFLGINIAQ-DTNGIKIC-LYDYIGKVLQDFDMSDANTVATPTLAGEDLHKDDTEDCDATRYRSLVGKLLFASTTVRTDIAYAVGILSRHLAKPSEMHMKCAKHVLRYLKGTQDIGHHYT-GDSSLDIYCDSDWASDKSDRKSITGYIVRYGGAPISWKSKKQTTVAMSTTEAEYLALGEATKEALWIIMLFDEMRVPLQLPISIHEDNNSCILLAEHPVFHSRTKHIDIRHHFIREHIIKKQIKLCPISTHTQIADMLTKGLN 1466          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig931.20058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE92_9PHAE1.260e-5929.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE2.010e-5827.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5C3ERV5_9BASI1.060e-5530.53Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KQD0_9PHAE2.370e-5428.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A498M2F0_LABRO1.520e-5327.69Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6H5JDU8_9PHAE5.540e-5328.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182G9Y4_AEDAL1.120e-5128.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182GIT5_AEDAL4.050e-5028.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4P6XI96_9ASCO7.380e-4926.93Integrase core domain-containing protein n=1 Tax=M... [more]
B5RUQ6_DEBHA2.380e-4829.35DEHA2G11297p n=1 Tax=Debaryomyces hansenii (strain... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig931contigD-dichotoma_M_contig931:149704..151170 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score191.4
Seed ortholog evalue8.8e-46
Seed eggNOG ortholog36914.XP_001527393.1
EggNOG free text desc.Transposable element
EggNOG OGs38DPC@33154,3NUZ7@4751,3QNZW@4890,3RTT4@4891,47E39@766764,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelDebaryomycetaceae
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1320
Cds size1320
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931172.8733292-CDS-D-dichotoma_M_contig931:149703..1506931622931172.8733292-CDS-D-dichotoma_M_contig931:149703..150693Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig931 149704..150693 -
1690799648.2911508-CDS-D-dichotoma_M_contig931:149703..1506931690799648.2911508-CDS-D-dichotoma_M_contig931:149703..150693Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig931 149704..150693 -
1622931172.9016638-CDS-D-dichotoma_M_contig931:150840..1511701622931172.9016638-CDS-D-dichotoma_M_contig931:150840..151170Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig931 150841..151170 -
1690799648.3011422-CDS-D-dichotoma_M_contig931:150840..1511701690799648.3011422-CDS-D-dichotoma_M_contig931:150840..151170Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig931 150841..151170 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig931.20058.1prot_D-dichotoma_M_contig931.20058.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig931 149704..151170 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig931.20058.1

>prot_D-dichotoma_M_contig931.20058.1 ID=prot_D-dichotoma_M_contig931.20058.1|Name=mRNA_D-dichotoma_M_contig931.20058.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=440bp
PHNHVEALQSPSAQGWKAATMSELASLSENKVESPVEATSVPPHTKVIGT
RWVFSVKPDGRFKAKLIAQGYRDRFKLPVGDVCSPVCHGDSQKIVLAVAN
NFGWKIEQFDAWNQTADQALKEMGWTATSYGPCLYQRGQGDQYALFVLYV
DDCLITSKTKEDPLQQIKKGLEGRFKIKRLGPASNFLRLKIERNDEIGIQ
IIDQTSYVQEMFGRFDMINSKGIDIPIIREQEHKGENKPLDGTELMYLST
YTSFDITYATWRLAKRMSGATQWDLASAKRVLRYLKGRTDLTITFRRGEF
ALKGYCDVSYCQPELNKKSVTGYTVMICGAPVDHYAKRRSITAVNTTESE
LVALDSCVKEVAFVRNLLGELGIQQTSPVPVLCDNAAACYIAETTRHGSR
TKHLTVSLRRIMDNMKSTHIKMTFVRGHLQKSDCLTKTLG
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mRNA from alignment at D-dichotoma_M_contig931:149704..151170-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig931.20058.1 ID=mRNA_D-dichotoma_M_contig931.20058.1|Name=mRNA_D-dichotoma_M_contig931.20058.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=1467bp|location=Sequence derived from alignment at D-dichotoma_M_contig931:149704..151170- (Dictyota dichotoma ODC1387m male)
CCACACAACCATGTTGAAGCTCTCCAATCGCCGTCTGCCCAAGGATGGAA AGCAGCGACGATGAGTGAGCTCGCGAGCCTGTCCGAAAACAAGGTGGAAA GTCCGGTGGAAGCAACATCAGTACCTCCTCACACGAAAGTAATTGGTACT CGATGGGTATTCTCAGTCAAGCCTGATGGTCGCTTCAAGGCCAAATTGAT TGCACAAGGATATAGAGACCGTTTCAAACTGCCAGTTGGAGACGTCTGTT CACCAGTGTGCCATGGGGATAGCCAGAAGATAGTGCTGGCAGTTGCCAAC AACTTTGGTTGGAAGATTGAGCAATTTGACGTCACCACGGCATATTTACA GGTTCAGATGGACCGCACACGTTTCGTGAAGCAACCACCTGGATTCCAGG AGATAAGCAAAGAGACCGGCAAGCCATACGTATGGCGATTAGCAAGATCG CTGTATGGACTCGCAACTAGTGCAAAGGCATGGAATCAAACCGCCGACCA AGCACTGAAGGAGATGGGATGGACAGCAACTTCTTATGGTCCATGTCTGT ATCAACGAGGGCAAGGAGATCAATATGCTCTGTTTGTTCTCTATGTGGAT GACTGTCTCATCACGAGCAAGACCAAGGAGGATCCACTACAGCAGATAAA AAAAGGGCTGGAGGGCAGATTCAAGATCAAGCGCCTCGGGCCAGCGAGCA ATTTTTTGAGACTCAAGATCGAACGGAACGATGAAATTGGAATTCAAATT ATCGACCAAACGTCCTACGTTCAAGAAATGTTTGGACGCTTTGACATGAT CAACTCCAAGGGAATTGACATACCCATAATACGGGAACAGGAACACAAGG GAGAGAACAAACCACTCGACGGCACTGAGCTGATGTACCTGAGCACCTAC ACAAGCTTTGATATTACGTACGCAACTTGGAGGCTAGCTAAGAGGATGAG CGGAGCCACACAATGGGACCTAGCGTCTGCGAAGAGAGTGTTGCGCTACC TCAAAGGACGAACGGACCTCACGATAACCTTCCGGAGGGGAGAATTCGCT CTGAAAGGGTACTGTGACGTGAGCTACTGCCAACCCGAGCTAAACAAAAA ATCGGTGACGGGTTATACGGTGATGATATGCGGTGCTCCAGTTGATCACT ATGCCAAGCGACGGTCCATCACTGCGGTAAACACCACCGAAAGCGAGTTA GTTGCACTTGACTCGTGCGTGAAAGAAGTGGCATTCGTCAGGAATCTTCT AGGAGAACTTGGTATACAACAAACCTCACCAGTTCCCGTCCTGTGCGATA ATGCGGCAGCCTGCTATATTGCAGAAACAACGAGACATGGGTCTCGCACG AAGCATCTGACTGTCAGTCTTCGGCGGATCATGGACAACATGAAGAGCAC TCACATCAAAATGACCTTCGTCCGGGGACACCTTCAGAAATCAGACTGTC TGACCAAAACCCTTGGT
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig931:149704..151170-

>mRNA_D-dichotoma_M_contig931.20058.1 ID=mRNA_D-dichotoma_M_contig931.20058.1|Name=mRNA_D-dichotoma_M_contig931.20058.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=2640bp|location=Sequence derived from alignment at D-dichotoma_M_contig931:149704..151170- (Dictyota dichotoma ODC1387m male)
CCACACAACCATGTTGAAGCTCTCCAATCGCCGTCTGCCCAAGGATGGAA
AGCAGCGACGATGAGTGAGCTCGCGAGCCTGTCCGAAAACAAGGTGGAAA
GTCCGGTGGAAGCAACATCAGTACCTCCTCACACGAAAGTAATTGGTACT
CGATGGGTATTCTCAGTCAAGCCTGATGGTCGCTTCAAGGCCAAATTGAT
TGCACAAGGATATAGAGACCGTTTCAAACTGCCAGTTGGAGACGTCTGTT
CACCAGTGTGCCATGGGGATAGCCAGAAGATAGTGCTGGCAGTTGCCAAC
AACTTTGGTTGGAAGATTGAGCAATTTGACCCACACAACCATGTTGAAGC
TCTCCAATCGCCGTCTGCCCAAGGATGGAAAGCAGCGACGATGAGTGAGC
TCGCGAGCCTGTCCGAAAACAAGGTGGAAAGTCCGGTGGAAGCAACATCA
GTACCTCCTCACACGAAAGTAATTGGTACTCGATGGGTATTCTCAGTCAA
GCCTGATGGTCGCTTCAAGGCCAAATTGATTGCACAAGGATATAGAGACC
GTTTCAAACTGCCAGTTGGAGACGTCTGTTCACCAGTGTGCCATGGGGAT
AGCCAGAAGATAGTGCTGGCAGTTGCCAACAACTTTGGTTGGAAGATTGA
GCAATTTGACGCATGGAATCAAACCGCCGACCAAGCACTGAAGGAGATGG
GATGGACAGCAACTTCTTATGGTCCATGTCTGTATCAACGAGGGCAAGGA
GATCAATATGCTCTGTTTGTTCTCTATGTGGATGACTGTCTCATCACGAG
CAAGACCAAGGAGGATCCACTACAGCAGATAAAAAAAGGGCTGGAGGGCA
GATTCAAGATCAAGCGCCTCGGGCCAGCGAGCAATTTTTTGAGACTCAAG
ATCGAACGGAACGATGAAATTGGAATTCAAATTATCGACCAAACGTCCTA
CGTTCAAGAAATGTTTGGACGCTTTGACATGATCAACTCCAAGGGAATTG
ACATACCCATAATACGGGAACAGGAACACAAGGGAGAGAACAAACCACTC
GACGGCACTGAGCTGATGTACCTGAGCACCTACACAAGCTTTGATATTAC
GTACGCAACTTGGAGGCTAGCTAAGAGGATGAGCGGAGCCACACAATGGG
ACCTAGCGTCTGCGAAGAGAGTGTTGCGCTACCTCAAAGGACGAACGGAC
CTCACGATAACCTTCCGGAGGGGAGAATTCGCTCTGAAAGGGTACTGTGA
CGTGAGCTACTGCCAACCCGAGCTAAACAAAAAATCGGTGACGGGTTATA
CGGTGATGATATGCGGTGCTCCAGTTGATCACTATGCCAAGCGACGGTCC
ATCACTGCGGTAAACACCACCGAAAGCGAGTTAGTTGCACTTGACTCGTG
CGTGAAAGAAGTGGCATTCGTCAGGAATCTTCTAGGAGAACTTGGTATAC
AACAAACCTCACCAGTTCCCGTCCTGTGCGATAATGCGGCAGCCTGCTAT
ATTGCAGAAACAACGAGACATGGGTCTCGCACGAAGCATCTGACTGTCAG
TCTTCGGCGGATCATGGACAACATGAAGAGCACTCACATCAAAATGACCT
TCGTCCGGGGACACCTTCAGAAATCAGACTGTCTGACCAAAACCCTTGGT
GCATGGAATCAAACCGCCGACCAAGCACTGAAGGAGATGGGATGGACAGC
AACTTCTTATGGTCCATGTCTGTATCAACGAGGGCAAGGAGATCAATATG
CTCTGTTTGTTCTCTATGTGGATGACTGTCTCATCACGAGCAAGACCAAG
GAGGATCCACTACAGCAGATAAAAAAAGGGCTGGAGGGCAGATTCAAGAT
CAAGCGCCTCGGGCCAGCGAGCAATTTTTTGAGACTCAAGATCGAACGGA
ACGATGAAATTGGAATTCAAATTATCGACCAAACGTCCTACGTTCAAGAA
ATGTTTGGACGCTTTGACATGATCAACTCCAAGGGAATTGACATACCCAT
AATACGGGAACAGGAACACAAGGGAGAGAACAAACCACTCGACGGCACTG
AGCTGATGTACCTGAGCACCTACACAAGCTTTGATATTACGTACGCAACT
TGGAGGCTAGCTAAGAGGATGAGCGGAGCCACACAATGGGACCTAGCGTC
TGCGAAGAGAGTGTTGCGCTACCTCAAAGGACGAACGGACCTCACGATAA
CCTTCCGGAGGGGAGAATTCGCTCTGAAAGGGTACTGTGACGTGAGCTAC
TGCCAACCCGAGCTAAACAAAAAATCGGTGACGGGTTATACGGTGATGAT
ATGCGGTGCTCCAGTTGATCACTATGCCAAGCGACGGTCCATCACTGCGG
TAAACACCACCGAAAGCGAGTTAGTTGCACTTGACTCGTGCGTGAAAGAA
GTGGCATTCGTCAGGAATCTTCTAGGAGAACTTGGTATACAACAAACCTC
ACCAGTTCCCGTCCTGTGCGATAATGCGGCAGCCTGCTATATTGCAGAAA
CAACGAGACATGGGTCTCGCACGAAGCATCTGACTGTCAGTCTTCGGCGG
ATCATGGACAACATGAAGAGCACTCACATCAAAATGACCTTCGTCCGGGG
ACACCTTCAGAAATCAGACTGTCTGACCAAAACCCTTGGT
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