mRNA_D-dichotoma_M_contig928.20015.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig928.20015.1
Unique NamemRNA_D-dichotoma_M_contig928.20015.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Match: D8LF70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF70_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.430e-65
Identity = 112/115 (97.39%), Postives = 112/115 (97.39%), Query Frame = 2 
Query:   59 MVKDKKASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVPRIKGLQTENADQA 403
            MVKDKKASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEV  IKGLQTEN DQA
Sbjct:    1 MVKDKKASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVANIKGLQTENYDQA 115
[Close]
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Match: F0YCW2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCW2_AURAN)

HSP 1 Score: 169 bits (429), Expect = 7.620e-51
Identity = 87/110 (79.09%), Postives = 102/110 (92.73%), Query Frame = 2 
Query:   59 MVKDKKASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVPRIKGLQTE 388
            MVK +++++  TRDYT++L KRL+G+TFKK+APRAVRE+KKFAQ MMKTSDVRVDAKLNKFL+SKG+RNVPTRVRVRLSRKRNEDEEA+EKLYTLVQHVEV  +KGL TE
Sbjct:    1 MVKGQRSADLVTRDYTVNLHKRLHGITFKKKAPRAVREIKKFAQSMMKTSDVRVDAKLNKFLWSKGIRNVPTRVRVRLSRKRNEDEEASEKLYTLVQHVEVTSVKGLNTE 110
[Close]
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Match: A0A6U1KMU7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1KMU7_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.920e-46
Identity = 84/111 (75.68%), Postives = 100/111 (90.09%), Query Frame = 2 
Query:   59 MVKDK-KASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVPRIKGLQTE 388
            MVK + KA +  TRDYTI+L KRL+G+TFK++APRA+RE+KKFA++ MKTSDVR+DAKLNK ++SKGVRNVP RVRVRLSRKRNEDEEA+EKLYTLVQHVEV  +KGLQTE
Sbjct:    1 MVKGQSKAPDLVTRDYTINLHKRLHGITFKRKAPRAIREIKKFAEKAMKTSDVRIDAKLNKHVWSKGVRNVPYRVRVRLSRKRNEDEEASEKLYTLVQHVEVASVKGLQTE 111
[Close]
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Match: A0A7S2UWG1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWG1_9STRA)

HSP 1 Score: 157 bits (397), Expect = 5.730e-46
Identity = 85/116 (73.28%), Postives = 98/116 (84.48%), Query Frame = 2 
Query:   59 MVKDKKASEFA---TRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVPRIKGLQTENAD 397
            M KD+K+S  A   +RDYTI+L KR+Y +TFKKRAPR +RE+K+FA + M TSDVR+DAKLNKF++SKGVRNVP RVRVRLSRKRNEDEEA EKLYTLVQHVEV   KGLQTEN D
Sbjct:    1 MAKDRKSSRSADVVSRDYTINLHKRMYKITFKKRAPRCIREIKQFASKAMGTSDVRIDAKLNKFIWSKGVRNVPYRVRVRLSRKRNEDEEAKEKLYTLVQHVEVTSFKGLQTENVD 116
[Close]
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Match: A0A835YWF7_9STRA (Ribosomal protein L31e-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWF7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.240e-44
Identity = 83/115 (72.17%), Postives = 94/115 (81.74%), Query Frame = 2 
Query:   59 MVKDKKASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVPRIKGLQTENADQA 403
            M KDKK +EF TR+ TIHL KR++GVTFKKRAPRAV+EVKKFA + M T+DVRVDA LNKFLFSKGVR VP RVRVR+SRKRNEDE+A EKLYTLVQ+V     KGLQ E  + A
Sbjct:    1 MAKDKKVAEFVTREMTIHLHKRVFGVTFKKRAPRAVKEVKKFAAKAMGTTDVRVDASLNKFLFSKGVRTVPHRVRVRMSRKRNEDEDAEEKLYTLVQYVPCADFKGLQNETVESA 115
[Close]
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Match: A0A7S1N0R3_9EUKA (Hypothetical protein n=2 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A7S1N0R3_9EUKA)

HSP 1 Score: 150 bits (380), Expect = 2.140e-43
Identity = 77/109 (70.64%), Postives = 93/109 (85.32%), Query Frame = 2 
Query:   71 KKASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVPRIKGLQTENAD 397
            K  ++  TRDYTIH+SKRLYGVTFKKRAPRAVRE+K+FA + MKTSDVRVD  LNKF++S+GV+NVPTR+RVRLSR+RNEDE+A E+LYTL+ HVEV   KGLQ E  +
Sbjct:    8 KPKADIVTRDYTIHMSKRLYGVTFKKRAPRAVREIKQFAVKTMKTSDVRVDTSLNKFVWSQGVKNVPTRIRVRLSRRRNEDEDAKEQLYTLISHVEVKDFKGLQNETVE 116
[Close]
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Match: F0WL95_9STRA (60S ribosomal protein L31 putative n=2 Tax=Albugo TaxID=65356 RepID=F0WL95_9STRA)

HSP 1 Score: 149 bits (376), Expect = 9.470e-43
Identity = 73/110 (66.36%), Postives = 98/110 (89.09%), Query Frame = 2 
Query:   71 KKASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVPRIKGLQTENADQ 400
            K++ +   RDYTI+L KRL+GVTFKK+APRA+RE+KKFAQ+ MKT+DVRVD++LNKFL+S+G+++VP RVR+RLSRKRN+DE++ EKLYTLV+HV+V  +KGLQTE  D+
Sbjct:   11 KRSPDVVARDYTINLHKRLHGVTFKKKAPRAIREIKKFAQKAMKTTDVRVDSRLNKFLWSQGIKSVPRRVRIRLSRKRNDDEDSKEKLYTLVEHVQVATVKGLQTETVDE 120
[Close]
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Match: A0A7S3PMV4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMV4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.680e-42
Identity = 79/116 (68.10%), Postives = 99/116 (85.34%), Query Frame = 2 
Query:   59 MVKDKKAS--EFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVPRIKGLQTENADQ 400
            MVK +KA+  +  ++DYTI+L KR++ +TFK++APRAVRE+KKFA++ M T DVR+D+KLNKF++SKGVRNVP RVRVRLSRKRNEDE+A EKLYTLVQHVEV   KGLQTE  D+
Sbjct:    1 MVKGEKAARPDVVSQDYTINLHKRIHRITFKRKAPRAVREIKKFAEKAMGTKDVRIDSKLNKFVWSKGVRNVPHRVRVRLSRKRNEDEDAKEKLYTLVQHVEVTSFKGLQTEKVDE 116
[Close]
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Match: A0A6V1PKA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PKA7_HETAK)

HSP 1 Score: 147 bits (371), Expect = 4.770e-42
Identity = 77/115 (66.96%), Postives = 97/115 (84.35%), Query Frame = 2 
Query:   59 MVKDKK--ASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVPRIKGLQTENAD 397
            M K++K  +++  +RDYTI+L KRLY  TF+K+AP+A+R++K FA +MM TSDVRVDAKLNKF++SKG++NVP RVRVRLSRKRNEDE+A E LYTLVQH+EV   KGLQTEN D
Sbjct:    1 MAKERKTRSADVVSRDYTINLHKRLYKTTFRKKAPKAIRQIKAFATKMMGTSDVRVDAKLNKFIWSKGIKNVPYRVRVRLSRKRNEDEDAKESLYTLVQHIEVADFKGLQTENVD 115
[Close]
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Match: A0A6G0XFA6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFA6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.440e-41
Identity = 79/128 (61.72%), Postives = 100/128 (78.12%), Query Frame = 2 
Query:   62 VKDKKASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTSDVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVEVPRIKGLQTENADQA*VDLLGVGWGLSVG 445
             K    ++  +RDYTI+L KRL+G TFKK+AP+AVRE+KKFAQ+ M TSDVR+D+KLNKF++S+GVRN+P RVRVRLSRKRNEDE+A EKLYTLVQHV+V   KGL +EN +    D +  G  L+ G
Sbjct:    9 TKTSTVADVVSRDYTINLHKRLHGATFKKKAPKAVREIKKFAQKAMGTSDVRIDSKLNKFVWSQGVRNIPYRVRVRLSRKRNEDEDAKEKLYTLVQHVQVSTYKGLGSENVE----DTVAQGEDLTTG 132
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig928.20015.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF70_ECTSI1.430e-6597.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0YCW2_AURAN7.620e-5179.09Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6U1KMU7_9STRA3.920e-4675.68Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2UWG1_9STRA5.730e-4673.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YWF7_9STRA1.240e-4472.17Ribosomal protein L31e-domain-containing protein n... [more]
A0A7S1N0R3_9EUKA2.140e-4370.64Hypothetical protein n=2 Tax=Prymnesiophyceae TaxI... [more]
F0WL95_9STRA9.470e-4366.3660S ribosomal protein L31 putative n=2 Tax=Albugo ... [more]
A0A7S3PMV4_9STRA1.680e-4268.10Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A6V1PKA7_HETAK4.770e-4266.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6G0XFA6_9STRA2.440e-4161.72Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig928contigD-dichotoma_M_contig928:40134..44098 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score209.9
Seed ortholog evalue6.3e-52
Seed eggNOG ortholog2880.D8LF70
Preferred nameRPL31
KEGG rclassRC00010
KEGG koko:K02910,ko:K13566,ko:K17433
KEGG ReactionR00269,R00348
KEGG Pathwayko00250,ko03010,map00250,map03010
KEGG ModuleM00177,M00179
GOsGO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006412,GO:0006450,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030054,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0055044,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG2097@1,KOG0893@2759
EC3.5.1.3
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosomal protein L31e
Ec32 orthologEc-06_001890.1
Exons3
Model size659
Cds size348
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig928.20015.1prot_D-dichotoma_M_contig928.20015.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig928 40192..43845 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931164.0342414-UTR-D-dichotoma_M_contig928:40133..401911622931164.0342414-UTR-D-dichotoma_M_contig928:40133..40191Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig928 40134..40191 +
1690799643.863595-UTR-D-dichotoma_M_contig928:40133..401911690799643.863595-UTR-D-dichotoma_M_contig928:40133..40191Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig928 40134..40191 +
1622931164.1051083-UTR-D-dichotoma_M_contig928:43845..440981622931164.1051083-UTR-D-dichotoma_M_contig928:43845..44098Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig928 43846..44098 +
1690799643.9304254-UTR-D-dichotoma_M_contig928:43845..440981690799643.9304254-UTR-D-dichotoma_M_contig928:43845..44098Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig928 43846..44098 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931164.0548131-CDS-D-dichotoma_M_contig928:40191..403401622931164.0548131-CDS-D-dichotoma_M_contig928:40191..40340Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig928 40192..40340 +
1690799643.8784075-CDS-D-dichotoma_M_contig928:40191..403401690799643.8784075-CDS-D-dichotoma_M_contig928:40191..40340Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig928 40192..40340 +
1622931164.0725996-CDS-D-dichotoma_M_contig928:42395..425191622931164.0725996-CDS-D-dichotoma_M_contig928:42395..42519Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig928 42396..42519 +
1690799643.9012513-CDS-D-dichotoma_M_contig928:42395..425191690799643.9012513-CDS-D-dichotoma_M_contig928:42395..42519Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig928 42396..42519 +
1622931164.0884304-CDS-D-dichotoma_M_contig928:43770..438451622931164.0884304-CDS-D-dichotoma_M_contig928:43770..43845Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig928 43771..43845 +
1690799643.9192548-CDS-D-dichotoma_M_contig928:43770..438451690799643.9192548-CDS-D-dichotoma_M_contig928:43770..43845Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig928 43771..43845 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig928.20015.1

>prot_D-dichotoma_M_contig928.20015.1 ID=prot_D-dichotoma_M_contig928.20015.1|Name=mRNA_D-dichotoma_M_contig928.20015.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=116bp
MVKDKKASEFATRDYTIHLSKRLYGVTFKKRAPRAVREVKKFAQQMMKTS
DVRVDAKLNKFLFSKGVRNVPTRVRVRLSRKRNEDEEATEKLYTLVQHVE
VPRIKGLQTENADQA*
back to top

mRNA from alignment at D-dichotoma_M_contig928:40134..44098+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig928.20015.1 ID=mRNA_D-dichotoma_M_contig928.20015.1|Name=mRNA_D-dichotoma_M_contig928.20015.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=3965bp|location=Sequence derived from alignment at D-dichotoma_M_contig928:40134..44098+ (Dictyota dichotoma ODC1387m male)
GGACCGATGAGTGTGGTACAGCTCCTCGGTACCTCGGAAGAAGCGCTCCC
TGTGAACCATGGTGAAGGACAAGAAGGCCAGTGAGTTCGCTACACGCGAC
TACACTATTCACCTCAGCAAGAGGTTGTATGGCGTTACCTTCAAGAAGCG
CGCACCGCGAGCAGTCAGGGAGGTGAAGAAGTTCGCTCAGCAGATGATGA
AGACTAGGTGAGAGGTGTGCAATAGCAACACAGAACTTGGAGCTCTTGCT
GCGCTTGCATTCGATGCACTTTTCATCTGCCCCTAGCTCAATCTTATGTG
TTATGCTGGTCTAGCTTGCCGCTCCTTTTGATGTGTCACTCATCGCGTTG
ACTTGAAATGAAATCGATAGATGTAGTTTGTTGCGTGAACTGCCTGAACC
CCATGCCAGGAGACAACTGACATACGGACGACAACGCTTGAAGCAGTCAT
ATTTGAGGCCTTGGTAACGAGAGAGGAAGGTGGTATAACTTTTACGATCT
TCTCGTTAGCTTCCCTTGTCTTTATTCGAGTTGTTCTCGTTCGGGTCGCT
GCATGGTTTCGGGTGCCTAGAAATCACCACTTCTGCCCCGAGTTTCCTGT
CTACTTGTGTGGCTAGAGGATATCCGCAATTTCATACCCTAAAGCCGTAG
TAGCCCATGTTCGCTGGCATTTCTAGTTTCATGGCCCTCATTGTTTGATC
ATCTTCTCCATTTTCTCATGTCAGTTGAGGGTGATCCATTGTTCAATGAT
CTCTTTGCCGTCCTCTAAGCCGACCTCATTTCCTCTGTTGATACACTTGT
GGTTACCTGACCGTCATATACAGTATTCTATTCCAGTCATGTCAACTCAA
GTCGACGAAACGGTCTCATTTTGTGCTTCATCATTCCTGACGGTTCGCTG
TGAGTATGTCCATCACCTCGACATAGTCGTTTTGTGGATCCTCTCTCGTC
GACTTGACCTTTCACTCCAGTAATCGGCTTTTTTCATCCACAAGACCCCC
TCTCATAGTGCTATGATGCCGATGTTCCTCCACTTGTGTCCGAGTCACCA
TGCCAGTCATTTAATGTCGAGACGCTGGTGAGACCTTCCAAGGTTTCCGA
GGGTCTCAAGGACCTATCTATGCCGTTGTACAATTTCGAGTGAATAATTA
CTCCCGGGGCGGATGCAATTGGGATTGAGAAATTTTATGGATAAGAGCAA
GATATGGTCCCCCCCAGCGCTTGAACGGTCCCTTCAGGTGACGGCAGCCT
ACTCCACAGCGATCCCGTAGCAGCGCACTCGTTACGGGGATAAAGCAATT
CCAACTGTGTACCTTTGGGTGTTGTAGACGAACATACTTTGACCGCACAT
TGACCATCTCAGGCCGCACTAGCTTGGAGTGAACACCTTTGAAACATTCG
TAAATGAATGTACGTTTCCTATCTTGAGACAGCACACTGTTGGGCACGTT
GTTGGGTACTGTACGAGGGTTTGCTTTCGAAGGAGACCCGCTCAACACTG
TTGGAGAGGGTCCAGGGGACATTTTGAAGTAAAGAGGTAAAGATGGCCTT
GGGCGATTCGTGCTCGGCCAGATGTAGTGGGAAACTCCACACCGTGTCAG
CTCAAAATGACTACAGTCCTGGCGCTTGCTCTGGCGCCCACTCTTGTGTC
GAATGTGCCTCAACTTCCCTCGCGCAGGCGAGGTGTGGCTTTCCATCCTC
ACAAATTACGTCGCGACCCCTACTCCGTATATGGGTAACTGTCTTTGTGT
GGTTGCACTTGGGGCACTGAACAGTTTGTGGACGTCGTATCAATACTTTC
ATTCACAGCAAAATGGTGCGCTTGACCCTAGTATACCGTCAGGATGCGCA
GGATACTATATCCAAACGGGGTTAATAATCTTTACACGAAAAGGAACATG
GGAGGGTCTCACCCTGCCTAACATGTTTCAGGGTTTGGCGCCTTGGGGGG
GAGGTTTAGACATAGAAATCAATGCAGAATACGGTATCTGATGAGCACTT
ACGATATACACATCTTCACTCGTCAGTTGTTTTAGTGCTTTTATATGTTG
CTCGAAATCACAGTTACGGCAAGATAGTTTTTGTTATGAATCGTGCAAGG
ATTGAACATTCGGGTGCAGTGAGGTAGACTTGTGTCCTTGAAAGTGCATA
TTGAGTTGAAGTCCCACAGGTATCTCTCATTTGCTTTGGTACTGGTTTCG
TTGACCTGGGACGTTTTGCCTCAACCTCCACTTCGGCTTGCAATGGAATC
TTTTGTGTTCAGTGATGTCCGGGTCGACGCGAAGCTGAACAAGTTCCTCT
TCTCGAAGGGCGTCCGCAACGTTCCTACCCGCGTCCGAGTCCGTTTGTCG
CGCAAGCGTAACGAGGACGAGGAGGCGACAGAAAAGGTGAGAGATGCTCA
CTTCAAGATCACGGGAGGGATCGTGAAGATGTTGAGCACTTGTGGGTCAT
TGTGCGGATGATCTGGACGGTTTGGTCCTTCTCGAGGCATGTTTGCTGCA
TTAGGGCCATTATTACGGTGATGCTTTTTCCCTCTTGTATGGAAAATCGA
AGGAGGCGTTCGTCGAAGTAATCCGTTCACTCAAATCGTCTGTGACTAGA
GGGATTTCCACCCCGCGTGCGTTATTTGATTATTTTCGGCCTCCGTTGAA
TGGAATGGAACGCCAGCACCTTGGTGTGGGTCAATTCCATGCCATGCATT
CGCAATAATGCCAAATTACATGAATGGATTGCTCGGATGAATGCCTCCTT
TGATTTTCCATGCTAAAGGAAGAAAAATAGTGCGTTGAGAACGACCTTCG
CCTTTTTTACGCGTCGAAACACTCGCCAGAGAACGTCATGTTTGCGTTGT
ACTGTTGGCGTGTAAGTGTGATGCCTTTGCGGTTGTATCTACCAGAGAAT
TGGTCCATGTTTTGCACTCGAGCTCTTGTCAGTAAACCTCGAGTTTGCGT
AGTACAAGACATGTAGGTGTGGTGCTTTCGCTGTATCCGCCCATGGATTG
ATCGATGCGTGGAACGTAACCTCTCTAGAATCCTGAGCTCATTGCCAAAT
AGCAGCTTGGCTGTTGGTCAGGGGATGCATGCCGAGGGTAGGAAGCCAAG
TAATACTCCGATGCTTGCATTTCTCACAAGCTCGTGAAATGTAGAGCAGT
CGATCATGCATAACAGAGTAACGATATTGCGGGGCAAATACCGTGTTTGC
CTAACTTCACCTCATGATCCTGCATGCTTTGCTAGCATTACTGAGGGAGT
AAGAGAAGGTGTAGGTCGAAGGGATGCGGTTCGTTTTGGACATTTGGCAA
CAGATATTCGAGGACGTTACGTTCAGTGTTGGGTTTAAGGCTATGTATCC
AGGGTTGATTCAAGTCTCAGGTAGAGCAGTAGCCCAAATAATCACAAGAG
GGACATTAAAATATTTTACTTGGACTTAGTATAGAAAATGATTAATCTTG
TTACGATTTGTCAACTGTACATTGGGGGGGGGAGGTGTGTACAGCGTTCC
GTAGATGCTGAACTTTCTGGGAGTGTCGTATTGCAGGTATGAGAAGTGTT
TTGAGGTCAACGAAAGGAACATTGACAATCTTGAGCCCTTCGATGTTGTT
CCGTTCGTCTGTTCCGTTGGTGCCTGATTGGTAACAGCTTTACACCCTCG
TGCAGCATGTGGAGGTGCCTAGAATCAAGGGACTGCAAACCGAGAACGCC
GACCAAGCATAAGTTGACTTGTTGGGCGTTGGTTGGGGGTTATCTGTTGG
GGCGAGGAGCCAAGGAGTGGATTCTCATGGTCCGTGCTTTCAAGGGTTTG
GCTAGGCGGTGCCTGCATTCAGCATGATGTGCCCTTGGTCTACAAATGCC
ATAACACGGGGAGCAAATAAATCACACAATTTTTTCGAGGCAGAATTCAT
TTGGGGTATGCGTGGGCGCTTGTGACCCAGGGCATCCTCATGTGAAACAG
TCTCGTACGTCAACA
back to top

Coding sequence (CDS) from alignment at D-dichotoma_M_contig928:40134..44098+

>mRNA_D-dichotoma_M_contig928.20015.1 ID=mRNA_D-dichotoma_M_contig928.20015.1|Name=mRNA_D-dichotoma_M_contig928.20015.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=696bp|location=Sequence derived from alignment at D-dichotoma_M_contig928:40134..44098+ (Dictyota dichotoma ODC1387m male)
ATGGTGAAGGACAAGAAGGCCAGTGAGTTCGCTACACGCGACTACACTAT
TCACCTCAGCAAGAGGTTGTATGGCGTTACCTTCAAGAAGCGCGCACCGC
GAGCAGTCAGGGAGGTGAAGAAGTTCGCTCAGCAGATGATGAAGACTAGA
TGGTGAAGGACAAGAAGGCCAGTGAGTTCGCTACACGCGACTACACTATT
CACCTCAGCAAGAGGTTGTATGGCGTTACCTTCAAGAAGCGCGCACCGCG
AGCAGTCAGGGAGGTGAAGAAGTTCGCTCAGCAGATGATGAAGACTAGTG
ATGTCCGGGTCGACGCGAAGCTGAACAAGTTCCTCTTCTCGAAGGGCGTC
CGCAACGTTCCTACCCGCGTCCGAGTCCGTTTGTCGCGCAAGCGTAACGA
GGACGAGGAGGCGACAGAAAAGTGATGTCCGGGTCGACGCGAAGCTGAAC
AAGTTCCTCTTCTCGAAGGGCGTCCGCAACGTTCCTACCCGCGTCCGAGT
CCGTTTGTCGCGCAAGCGTAACGAGGACGAGGAGGCGACAGAAAAGCTTT
ACACCCTCGTGCAGCATGTGGAGGTGCCTAGAATCAAGGGACTGCAAACC
GAGAACGCCGACCAAGCATAACTTTACACCCTCGTGCAGCATGTGGAGGT
GCCTAGAATCAAGGGACTGCAAACCGAGAACGCCGACCAAGCATAA
back to top