mRNA_D-dichotoma_M_contig923.19971.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig923.19971.1
Unique NamemRNA_D-dichotoma_M_contig923.19971.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig923.19971.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 2.400e-55
Identity = 106/160 (66.25%), Postives = 126/160 (78.75%), Query Frame = 2
Query:  119 PRLSSVLRVAQLPDAPVFDLDKEILERQKVESRWRSEADAKASAPFTWKAFTEKVPESEAQRATDEQSKFRSYVRLAGKLAGGDEGAAFPNADRALFRAINAGRDAANDVRRDLELVVGKVADKDWKELTTLAKNLHSWRRSRVQGARTSRSPGVSPART 598
            PRLSSVLR     D P FDLD EIL+R++ ES+W S+ADA+ASAPF+WKAFTEKVPESEAQRA  EQ KFR Y RLAG+LAGG +GAAFPNADRALF+AINAG +AA   +RDLELVVGKVA+ DW +  +LAK LH+WRR RV+ ++    P  +P RT
Sbjct:    4 PRLSSVLRRTAAGDGPGFDLDAEILQRERAESQWESQADARASAPFSWKAFTEKVPESEAQRAAAEQDKFRRYCRLAGQLAGGHDGAAFPNADRALFQAINAGPNAAGKAKRDLELVVGKVAESDWDDAASLAKELHAWRRDRVRASQPH--PPAAPLRT 161          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig923.19971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FN81_ECTSI2.400e-5566.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig923contigD-dichotoma_M_contig923:115740..129897 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score209.9
Seed ortholog evalue9.8e-52
Seed eggNOG ortholog2880.D7FN81
KEGG koko:K12854,ko:K18663
KEGG Pathwayko03040,map03040
KEGG ModuleM00354,M00355
EggNOG free text desc.response to ionizing radiation
EggNOG OGsCOG1204@1,KOG0952@2759
EC3.6.4.12,3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko03400
Hectar predicted targeting categoryother localisation
Exons6
Model size1151
Cds size543
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig923.19971.1prot_D-dichotoma_M_contig923.19971.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig923 115810..129260 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931157.3081577-UTR-D-dichotoma_M_contig923:115739..1158091622931157.3081577-UTR-D-dichotoma_M_contig923:115739..115809Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig923 115740..115809 +
1690799640.9200726-UTR-D-dichotoma_M_contig923:115739..1158091690799640.9200726-UTR-D-dichotoma_M_contig923:115739..115809Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig923 115740..115809 +
1622931157.412653-UTR-D-dichotoma_M_contig923:129260..1294951622931157.412653-UTR-D-dichotoma_M_contig923:129260..129495Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig923 129261..129495 +
1690799641.0026612-UTR-D-dichotoma_M_contig923:129260..1294951690799641.0026612-UTR-D-dichotoma_M_contig923:129260..129495Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig923 129261..129495 +
1622931157.4432957-UTR-D-dichotoma_M_contig923:129594..1298971622931157.4432957-UTR-D-dichotoma_M_contig923:129594..129897Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig923 129595..129897 +
1690799641.0150087-UTR-D-dichotoma_M_contig923:129594..1298971690799641.0150087-UTR-D-dichotoma_M_contig923:129594..129897Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig923 129595..129897 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931157.3251593-CDS-D-dichotoma_M_contig923:115809..1158571622931157.3251593-CDS-D-dichotoma_M_contig923:115809..115857Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig923 115810..115857 +
1690799640.9383032-CDS-D-dichotoma_M_contig923:115809..1158571690799640.9383032-CDS-D-dichotoma_M_contig923:115809..115857Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig923 115810..115857 +
1622931157.3407967-CDS-D-dichotoma_M_contig923:116329..1164151622931157.3407967-CDS-D-dichotoma_M_contig923:116329..116415Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig923 116330..116415 +
1690799640.949565-CDS-D-dichotoma_M_contig923:116329..1164151690799640.949565-CDS-D-dichotoma_M_contig923:116329..116415Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig923 116330..116415 +
1622931157.3591595-CDS-D-dichotoma_M_contig923:127397..1275261622931157.3591595-CDS-D-dichotoma_M_contig923:127397..127526Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig923 127398..127526 +
1690799640.9608223-CDS-D-dichotoma_M_contig923:127397..1275261690799640.9608223-CDS-D-dichotoma_M_contig923:127397..127526Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig923 127398..127526 +
1622931157.3758276-CDS-D-dichotoma_M_contig923:128487..1286071622931157.3758276-CDS-D-dichotoma_M_contig923:128487..128607Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig923 128488..128607 +
1690799640.9738913-CDS-D-dichotoma_M_contig923:128487..1286071690799640.9738913-CDS-D-dichotoma_M_contig923:128487..128607Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig923 128488..128607 +
1622931157.395706-CDS-D-dichotoma_M_contig923:129100..1292601622931157.395706-CDS-D-dichotoma_M_contig923:129100..129260Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig923 129101..129260 +
1690799640.9901721-CDS-D-dichotoma_M_contig923:129100..1292601690799640.9901721-CDS-D-dichotoma_M_contig923:129100..129260Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig923 129101..129260 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig923.19971.1

>prot_D-dichotoma_M_contig923.19971.1 ID=prot_D-dichotoma_M_contig923.19971.1|Name=mRNA_D-dichotoma_M_contig923.19971.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=181bp
MGEKERGGGKLVERLPPRLSSVLRVAQLPDAPVFDLDKEILERQKVESRW
RSEADAKASAPFTWKAFTEKVPESEAQRATDEQSKFRSYVRLAGKLAGGD
EGAAFPNADRALFRAINAGRDAANDVRRDLELVVGKVADKDWKELTTLAK
NLHSWRRSRVQGARTSRSPGVSPARTLSQG*
back to top

mRNA from alignment at D-dichotoma_M_contig923:115740..129897+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig923.19971.1 ID=mRNA_D-dichotoma_M_contig923.19971.1|Name=mRNA_D-dichotoma_M_contig923.19971.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=14158bp|location=Sequence derived from alignment at D-dichotoma_M_contig923:115740..129897+ (Dictyota dichotoma ODC1387m male)
GCAGAACGAAGACGAGGTAGTCACTGTCGCAGAGCTCGTCTGCGCCAAGG AGCACCACGGAACCATCGACATGGGTGAAAAGGAAAGGGGCGGGGGGAAG CTAGTGGAGCGCTTACCTGTGAGATCTTGAGGCTAGAGGATAGTGGTTGA GTTCACCCCAAGGCTTCCTGACCGTCATGGACACTTTGCGTATTAATATT AATAACTCCCGCGAGACATGATATCACTTCTCTAGTAACTTGCATAGACG ACTCGATAGCACGATTCACAGCTGAATGCCTTACGGGTCCATATATACCG GAATCTTGCTCAAGTGTGGTCCCACTAACGTGAACCTTTGTTTGATGCTT GAAGGATCCGTATCTCCACTCGATGTTGTCCTGGAGAGCCTAGATATCCG GCAAGAAGCCATCAGCACCGACGGATTTGCTTCCCTGGAGCGTCTCCTCA TAGAACCCACACCAAGACCACCACATGATATCTGTCGTCCCATTGAGGTA GTTGCAACATGGTCACTTTGATATTTGCTACCAAATTACGCCCTCAATGC CAAATCTGTGCATTCTGCCTCTCGTCTGCTCCTCTCGCAGCCGCGATTGT CCTCGGTCCTCCGAGTGGCTCAGCTGCCCGACGCACCCGTATTCGATCTC GACAAGGAGATCCTGGAAAGGCAAAAGTGAGTCTTACCCCAATGTTGGAA CATAGACTCTATAGTAGGCAAGGGCTTACAGTGGTGCCATGTGATTGGTG ATTGATGTAACAGCAGTTGTAGTAGCGGTCGAGTCCCAGCAGAATGGACG AGCTGCGGATGAACACTTCACTCAGCATGTTGAGGATTCATGCTCCCCCT GTATGTACTTCCTAATACTCGTGACCTGCCGTGTTTCTGGGGATCAAGTG CCCCACCTCGTTCACGTACATCTTCAGAGGCAACCTTTTTTCAACATGAT TCCTTGCAGAGGGTTGCATCGTTGATCTCATCTCTAGGGAGGATCGAGAT TAGAGGTCCGACAGCGTCAAGTTGTGCCGCATTTCCGTTCTCGAGAACCT TCCCGGTTTCTATGGACGGAAATCCTATTATTCCGTAGTCTGTTGACCAT ATCCGATTTGCAGCACGTGAGGACAGAGGACAGGTTGCCATACGTGAGCA AACCATGTGTAAAGCAGTGGTCCCTACAAAAGGCAGGGAAGTGCGGATTT TTAACTCTATTCCTGGGCGATTTGCCGCGTCCAGCCCCTCTACCTTCAGG AAGGCCGCCGCGATACCCCTATTATTTATTTTTTGCTTGAACGGAGAAAC ATGCGCACCCTCCGCGGTTGTCGCGTGTTACGCCCATGGTATCCGAAGAG TAGGTCGGTAGGGAAGAGTAGGGTGCATGAATTTCGATTCATGATTCAAC GTGGGGGAAGATATTGCGACAGCCTTCCCTCCTTTTGGGGAAGATATTAG AGAGTCTACAATATGCTGTTGTAGTGTTGTACGTGTGCGTTCGGGGCTGT TTCTCCCGATAGGAGACGGAGTACCCTGTCCTGTCGCAAAACCCAACGGG TACAGTATATCCTGCATTGTCGGTTCTCCTTCCAGGATCGTTGATGGATC CTGGGAGTGACGTGCTGTCCTGTCCTATGTGTTACGAAGTCCTTGAGCTG CAGCAACCGCAAGTTTTGATGTACAGATGCAAATGCGACGGCGTTCACTG ACAAGGTCATCATGCGACTCTGACACAGCGTTGTCGACGTATCACGAGGA GTTGTATACAATCGACTAACCCCCCAGATTAAGACACCCCAAGATTAAGG CACCCCCAGATTAGGGCCTCCCCTCCGATTATGGCCACCACAACGGGACG GGCCTTACTGTCGGCCAAAACAAAAGTCGGCTGGAAGCAGCGGGAGGACT ACGAGTCTAAAGGCAAATGAAGAAAAAGACGGAGGGGAAGCGGCGCAGGC CTCAACCGACGGCGCTACAGGGAATGTCCTAAATCTGTCTACCTCGTCCG CAGATGTCTTGGTTGCTGAGCGTTGTCCATGGAGAATGGTCTGGAGTCGT ATGATTCGAATGACGGAGCTTGGAGCGGGACCTTGCATCGGAGTCCGATG TCTTCAAGTCGGTCGACAGGTCCAGGAGGCGCAACTAAAGTGACCCAATA GCCATTGATGACTTGAAGATGACACCCAGAAATAATGGAACACAGATGAA AAAAACAACGCGGAGGGTAGTCCCGCTCTACGGCGTGGCAACAAAAACAA AAAACGAAGTGCTGCATTAAGAGTATCAGACGAAAACAGCCGATTCCTCC CCCCTTCTTTCCCCTGTTGCTTCACATAAACATTAACCATAAACGAAGAA AAAAGAAATACAGTCAAATAAACAAGCAGAAGTCAGACCACTAAAAACAA ATAAATCATCCAAACCGAACCAAACCAAAAACAGATCAAATCAAGTCGAA AATAAATCGAAATCAAATCAGATCGATAGGTGGACGGCGTGTCGGACGCT GTCAAGAATTCCGCGCGCCTTATGGGCGTTGTAGGCACCTGGAAAAGCGC AGGAAAAACGCGCGGCCGCGGCATCAATGGAGTATAACTCGAGGCGCAAC GCAATTTTGACAGGACCGAGGTCATCAAAGAAACCAACGGCTAAAGGCTT GTGAACGGAGCCCACGGTGTGGATATCCCCTATCCACGAACGGGAGTCCT TACTTTTAGACCATACGTGAGCACCATTGAGCCTACTGGAGTCGGAAAAC GCTTGCAAAACCTCGTCGCGGGGAAGAAGATTGAGCCCTTTACCGAAATT CGTTCCCCACGTTCGTGGTGAATATCTCTCAACGCGGCGCCTTGCCTGAA GCGGAGGTAGCGCTGGTGGCCCGAACTACCATGCTGAATTGGTGTGCCTG CCCAATATACAAGGATTACCCGGCGGGAGCGCTGCAGATCCGCCTCACGC TCCCATGACGTGCTGGAAAGACCAAGTCAGCGCGTTTTGTACAGAACCAA AATTCGTCCACCCCATCCCGGGCAATCTGGTGCGCTACGATGACATCTAC CTCAAGACGCTCCACATCTGAGATGGATTCAACATCATCATGCGTAACAT GGAACGGGGGAGACTTCTCAGAGACACTGGCAAGAATATACTCGGTAAAA CCGGCGGGCAATTGCTGGGGTCCGTCCTCCGTGTCATGGGGGTTCATGCA CGGTTTACATCTCATGACCGAGGTGCGGCACTTAACGCCGGGGCCTCTCG GGCCGGGCGGTAGCTTCGAATAAAGAAGCTTGTCTTCTACGGATTGCCTA TCGGCGCAGACTCGCGATGTTCAATCCGTAGGACCTTGAAGGGGACAGTC CAATTCAGGGCTAGCTTTGTCTTCGATGCACGCTCATTCTCGTCTATACT GTTACTCTGCCTTGTGGCTAGCTTGCTGTTGTAGACCCAAACCCAATTTC CTGCCGTGTAGACCGGTCGCGTACGAAAAACATCCCTCAGGGCGTGGGTC GCCCGTGCAATACGAGACGACTCGATGGCGTGATGCCCACGCACTAACCG ATACGCTAATCGTTGTCGGTCCCTCGCCAAATTACTACTCGAGCTAATCT CGCTCAAGACCTTGGTTACAACATGCGCCACGACGCTCGATGACCGTAGG GGGCACGCGGGGAAGTCGACCCAGATGCACTTCATTGGCTGCCACACCGG TGGCGGCGCTGACAGAGTTGTTGTACGCAGATTCAACATGGGGCAATCGT TTGTCCCAGTCGTCCTGTCTTTCGTTGACCACCATCGACAGCATTTGCGC CATCGTGTGGCTCACGCGCTCGGTGCCACCGTTGCCCATGGCGTGGTACG CGCTGGTTGTCAAATTGCGAATTCCCATCATGCGACACACAGCACCAGAA AGCTCAGAACAAAACTGTCCACCATTGTCCATCAATAGGGACTTGGGGCA TCCCCAGTTAGGGACATACAGTTCTATCAAGGATGACAATCGGGCTCTTT AATTATTGACTTGGATTTAAGACGTAGCCGTGAAAAGAGCCCGATAGTGA TCATTGACAGTACTTGAGTCGTTCACTAGGATATCGGCGGTACCCAGGGC AGAAAACTTCGCAACACGAACATCATGCATGGATGCATGATGACGAAAAT GGTCCGTGATAAACACTATGTGCTTGTTTCCATCGCTCGTCGTCGGGAGC GGGCCAAAATAATGTTAGAGATATTGCTTCGCCGGGACCATTGGGCAGCG GGATGTTGATCAAGGGCCAAGGAATACATATTCAGGGGGACTGACTACCT TACTCGGCACGTAAAACAATTACGAATCCACCAAGGAACACAATGCTCCA TGCCAATCCAGAAATGAAAACGCTCAAGCATACGCAGAGTCCGAGAAACA CCCAAATGACATGATACATCCGCACGACAGTGCTGCAGAACTAGGGGGCG CAATAGGAGTAGAACGAAAATCCGAATGGGATCGGCATTTAGGAGGCTAG CACCATGACCCGCGGATCGGTCGTTCCTATGCGTGGGCTTAGGCCGACCC TTCTAGCCTTACAGGCACCCGAATATGAAGAGAGAGAGAGCCATCGCAGC TATACAATTAGTATTAGTTACTTGCTCATCTGAAACTGGCTTTCAGATTC GGGTCGGCCCCGATTCTGTGCGGTCTCTCTCGAACATGAAGTTCAGATTC GGGTGAAACCACAGAGTCGGACCCGACCCGAATCTGAAGGCCAGCAGCAG CTAAGAGAAGTATTTAATGATACAGCTATCTAGCTTGTATTTGCCCAGTG CCTAGAGGGGTTCGACTTACAGTAAATCCAAGGTACTCTGTTCGAAATCT CAAAAATTGATGCAAAGGCGGCTCTAAAGTCGAAAAGCTGGTTCTCTTCA TAGTCGGATGCTATAAGGCTAGAAGGCTCGGGGTCGGCCTTACCAACAAG CAGCGGTACCGTATTTCGACCATCCGTGGTCATATTTACCAAAGCAGCCC TACTTGCTCGGTCGAACACTTCGTCCCTTATCGGGACGGCTCTCACGCCG AAAGAGTAGACAGTCTCACTCAACACATCTGACGGAAAAGAGACAGGGTA ACCTCGGCTTACATAGGCCATGGTCACGCAGCAAACAGGATCGACGAGCT GTTCCCGTGAGCAGTCGCGCTAAGAGAAGCTTTCCACCATAGAATGATTG CAAGTCTCGCTCGGGGGATCGGGAGCAGGGTAGGGCCGAAGGGTGTGTGT ATGAAGATGAAGGCGAGATGGAGGAGTCGCTGGAGGGGGCGCTGGAGGAG GTGCTGGTGGGGGCTCCGCGTGGGGCTTGGCGGGAGCGATGACGAGGAGG CCTAGGGGGCTTCGGCTGGGGCTCCGAAGGAGCGCGTCAACAAGGGGCAG TGGGTGAAGCACGCGAATGGTCCCCGGGGGGCGGGGGACTTACCGGGGGC GGAGAACGGTTCACCAGGGAACTTCTGGCAGTGGCGGTGCACGGGGCAGT CTGCCGGAGCGCCAGCTTCCGCAGAGGCCCTGATCGCCCCGCGGTTGGCT GGGGCGCTGAGGCCGGGGGCATCGGTCCTTGAATCGACGCGAGTCAACTC AGGTCCGGGCGCCGAAGCGTTTTCCGCCGGGAAGCGGGCTGGCGCCCCTG GTGGGGCCGGCGGGCTACAGCCACAAGCCAGAGTATCCTGGACCAGACGA CGTGACGATAGTGTGCATGGCGTCGTGGGCGCTGTCCGTGTCATCCGAGT TGCTGCAGTTGTAGGTGTCGGTAGCCGGGATGCCGTACGCGAGCGTGTGC GCTGCAAGATGCTCTTCGAAAGTTGGATGGGGCACACAGGCGAAGCAGGG GTCACGTCAGTGACAACATGTATGGATCCCAGCGATCGAAATTCACCAAA TTCACGCTCGGTTAGAGGCACAGGGCGTACCACGGGATAAGTAGAAGGTT GATCCTAAGGTCTCAGAGGGGGGATCGGGGAGTGAGAACGGGGCGGACAC GGGCGTCGGAGGGACTGAGTTGGCCAGCCTGGACCAGAGGCCCGACGCTC CTATGAAGCAGACGTCGACGTCGTCGGGGTGGGTGAGCGCTGAGTCACTA TGGATGGATGTCAGACTCTGTAGCAGGCAAAGGGAAGCGTGGCGAAACGT CTGCGTTACCGTTACCTGTACCTTTCGGACAAACGAGGTCGCACTGGTTA GCGTCGAGGATTTCCAGCAATCTCTGGACCCGTGGGTGGTATTTACCTAC CTTGTCGAGGGTCTCAAGGGCCTTGTGGTCCGTAAAAGTGAGAAACGGAA CCTTACGGAAATACGGTCGTAACCGCTTCATCAACCATACAACAGCGCCT GCTTGAGTTCTAGGACGGTCCAGTTACGCTCCTTTGGCAATGTCGCGCGA CTGAGAAATGTAATGGGGCGAGCCGATTGGTCGACTCAGTTCTCCTCTAA GGTAGCACCCAAGCCATCTCGGGGGGTATCGCAGGAGGCATCGCAGTACA AGCGGAAGGGCCGGGACCCATCGATCGCCGAATCCCAGTCAGGAAACGCT AGGGCAGGGGGGCACGCTCAACTCGTCTAAGGGACTGTTGACCGCTTTGA CCGTGTCTTGGGCGAAACAAAAAGGGGCTCACTGTTTCTGTGTCAGAGAG TGGCCGGAGGCGTTTCGCAAGGTTCGGGAGGAATTTCCTGTAGTAGGATG AACCACCGAGCAGAGACCGGGGTTGTGAGACGTCAGAGGGCATGGGTATA CGAGTCAAGGCTTCAACTTTCCCTGGATCTCGTCTCAGACCTATGGAAGA AATCAAGTGTCGCAGGAAACGAGTCTACTGCCGCCGATTGTTGCTTTGCT TGGGGCGAGCTTCAGATTGTGTTCTGTAACCCTTAAGGCGCCTAGCGAAA CCGGAGTTGCGTTTGTTACAATTCCGCCCCCTTACCCCAACCAGTTTGAC TCAACACACATGAGCAAGACGCTCCCAGATGCTGGCGTTTCTTATACGCT CTTGATGGAACATAATCTACAGCAGTGCATATGGGTGTAACGGAAAAAAT GGTACAGGAAAATTGAAGTTTTTGCGGACAAATTTTCACTGTAAAAAAAA CGAGCAGACCCCGCCGTAGGTACCCGTTCTTCTATACTCAAAACAACTGC AAGAATCCCCGTAGAAGATTAAGAAAATCCCTCTATTATGTACCCCAACT GACAACGTAACCAGCTCTGAAGCCCTTTTTCGAAGTGGGGCCTCGAGTGA CGACTACGAGGTAATGGCGTAGGTGTGTTCCTGAAGGTGCTAATTACACC GCATTTTGAGGCTCTTTCAACTTCCCACCATCATTGCGCCCTCGCCAGCT TGAGCTAGGTCGCTGACGAATGCGGAAACTAATCCTGATAACCTTCCTCA GAGTTCGTTTTTATTGATTTTGTGGTCGCGTACGCATTAGTGATGGATCT CGTTGTTTGGTGTGGATCACGCAACCAAAATACTGGAATGGGGCCATTTC GTCCCCAGTTTAAGACACACGAAGAGAAAGCAGGGCTTTGGCCACCAAAG CCCTCCCCTTTCGATACAGCGGTGCAACCACAGTCTCCACATAATGTAGG GCGTGCATTCAAAGCGTCTGTTTGATCTTTCATAGCGATCTTATATGTTA ATTGGAGCAGGAAGTCCTGCGCATGGGTAGATCTTGACCGCCTGCTCTCA CCCAGGGATGCCGAAAATTGCTTGACTTCTAGGTATCACCCAACACACGC TGGTTGACATCTGAGCACTACTCCCGCTACACAATGCTTGCACTGGTTGT TGTTAAGCGTATCCGCTCACCGGGCACCTGTAGTTTTGCCCTGAGTGTGA GTGTGAGTGTGCCGTTTGTGTAGGTGCAGAACTTTGAGATTGTTTTTTCT GTGAAAACAATTTCTGAACGTCATCACCTCTCCTGTGCCGTGTACTGTAT GGATACAATCCTCTTTGCAGTATGCAGTACAATACTTCAACGTCAGTGAA ACGATTTCCATGCGAATGCCTCTGTTCATTAAGATGATCTGGACGTTATC TCTGCAACGGACACAAGTGCGCTGAAGGACAGTATACGGTATTAGCGTGT CTTCAGTATCATGCGTAAACTCTGTATCAGACGCGTTTGCTGAAGGACAG TATGACTGCATTTGAGTGTTTTCAATCACAGGGGCATCCGACTGATGACG GCAAGATGATACAGTACTGTGAGCCATTTCATCGCTTATCACAGAATTAC GCTACATCTCTGGTTCGTCGTCCATATCGGAGTCAGAAAGCTCCAATTCC TCCTCAGCGTCGAGCCCACTCTCCTTGCTGACCTTGTACTTTCATCTCGT TTCTCGCAGGCGTTTGATTTTGTCCTCTCCTCTGTTCCCGACCCTTTTCC TCTGCCCTCCTCTTTCTTGATCCCGCCACCGCCTTGGAAAATTTCTCTCT CATGGCCCTTGTCTTCTCCATGATGGAACTGTAAATTTGTGCTGTATTGT AGTCGTTCTGCATCGTGGAACATTCGTAGAACATTCAACATCCGGGATTG CGCGAAGGTGAACGTCAATCGCTTGGTTCCGTTTTGTTCAAAGAAGCTGA AGCGTTTCGAGTTGCTGTTGGAACAAACTATGCGTTCGACTGTAGTACTG TGCACCAGTGCACGATGCTATGCCGCAGATTTGCACGCCACGGCATACAA TGCTCGTAACTGTACTCTGCTTTACGGTACTGTGACGAGCACTGTACCAG TTCAACCGTATCCTGGGGTCCTTGAGTGCCGGCAATCAAGAAAGACGTGT CCGAAGGACTTCAGTACTAACTGCAAGTCCGCATTGCCGACTATTGGTGC TGTTTGGTTACTCTGCTGTGTACTGTAATGCACTCTACAGAATGCATATC GGTTTTCAACTTTCAGGTACGGTATAAGATGTACAGTACGTGAGGAGGGC GTGCGACTAGGTACTGGACTTTCCAACCTCGCCTGCAGTTTGGGTTACCG ACCAAACTCTTTGACAAATCGCCGCAACTCTCAAACCTGCCTGGCACGTT TACGCCACGGGCAAACCTACACCCACCATGTTGGTGGAAGCACTTAAATA CAATGAAAGGGAGCATTTCATGCTGGAAGACGCACCCAGACGCCCACCTC TTCGTGCTGTCGACAGCCCCAAGTTCAGTACCTTTTGGGGTCCTCGAGTA TCACCAACCGAGAAGGAGATCCTGCGAGCAGACTTTCCTGCACCACTGGG TCTGCAGTAGTGTATGAAACAGCGGGAAAACGCTTGGAGATCACGCCCCA CATGTTTTAGAGACGTCTTTGCGGCACTGTGGTCTATGGGGAAACCTCAT GGAGCATATATCCTACCCATTCTGGCTGCTTTCAACAGGGAACAAATAAG ACCCGTCCCCGAGTTTTGCTCGCTAACTTCAGCATGAATGGAAGTGATGC ATGCGCACGCGGGCCCGAATTGAAGGACTACGAACCCTTCAGTGCATCAC ATAGTTTTATTTCCGCCCTTGTCGTGAACTGAACTCGAGCTGTCGAGGTT GCAATTGAGGCTAAAAGGTCAAAGACCCTAGAAATGCGGCGTAATTAGCC CCTCCAGCGATACAGCTACGCCAGCGTCCCGTGCTCGTCACTCGAGTCCC CGCATCTCAGACGATTTCCAGCACTGAATTCCTTGCTATTTATACTTTAC TCTAGGCTAGGGTCTGTCTCTTTCGCAGTGTCAGAGAGTGCGTGATTGTG TTTTCTAGAGATGAGAAATCTGCATATTGCACGGCATTTTTCGACCATGA TCGAAAGAACTTTTTTGGCGCCAGATTCCGGCTGTTTCTTGTACCCATTT ACTCCGTTACACCCATGTGCACTGGCATTTCCCTCGAAAGATAAGATAAG ATAAGATTAGATAAGATGAGATAAGATAGAATAGGATATGATACGATAGG ATAAGATTAGATTAGATTAGATTAGATTAGGTAAAATAAGATAAGATAAG ATAATATTAGATAAGATTAGATAATATTAGATAAGATAAGATAAGATAAG ATAAGATAGGATAGGATAGGATAAGATTAGATAAGATAAGATAAGATAAG ATAAGATAGGATAAGATAGGATAGGATAGGATAGGATAGGATAGGATAGG ATAGGATAGGATAGGATAGGATAGGATAGGATAGGATAGGATAGGATAGG ATAGGATAGGATAGGATAGGATAGGATAGGATAGGATAGGATAGGATAGG ATAGGATAGGATAGGATAGGATAGGATAGGATAAGATAAGATAAGATAAG GTAAGGGGTTCGGGAAATAAGGACTAACTTAGCCAACCCGAGCGTCTGAA GGGTTTAAGTCTGCCCAGGAAGGCTCGAATACTCTCAGTTCAACTATCCC GTCCGAGCAGCACGGGCTACTGCATCGTGCCTGTCCGTATAACATACGCC CACACAACTAAAGCCCCCGATGGGTTATCATCGCGTAGAAACTGCACGCT GAGGCGAACACACCTCGACTTGGAGAGGGGCGCTTGAGAGCCAAACCCTC CCCACGTACGAGGGGAGGTGTGGCGGAGGAAAATTTCTATCGCAGCGTCA GACATAACCATCCATTACCAAGCAGACTCAAGGATGAAAGTCCAGGGTAT ACCTGTGTCCAATAGAGCAATACATGGGTACTGGGAGTGAGCGCCAACAT CAAAATACACAAGAATCTTGGTGGTGTGAGTTCGGTCATCAACCTTGACT ACTCCAGGTCGAATTGGCCTCGACCTTGTAAGTGGTGTAGTCATGCGCGG CTGAGGACGATCCAATTTGTGATCGGACAGCACGGGCACTCTCGTTCAAG ACGTCGGGTGTCACGCGCAAGCGTAGGGACCTACGAAGCTGGGGCTGTTT AGGGCGCATGGCTAGTCCATCATCATTCGGCCGTCCAGGGAGGATTTTCA TCAGTAGAGCGTCAGCAGGGGTCCAACATCAATCACCCAGTACAGCTGGC TTGCGCTGACCTTAAGATGTCAGCATACGGCTCACGAAGTGGTTGGAAAC TCAAGAGCATTAGGTGTAGACCACCGTTCCATGCTCGAGAATGCCTAGTC CGGCCTGACGTTAGATTCACTATCGAGAGACTTGTTTTGTGTGTCGTGGA GTGGACTGCCCATGCGTGCACCACATTCCCCTCTGTTTAGTGCACCTCAC CAGTGTTATCACTGCATATGTTGCGCAACTGTGATCGACCGCGGTTTATT GAGGACCATGAGACATTATCAAAGTGGCTTAACCATCGACGGGATCCATT CTGACCCTCCCCGAGCTTTTCTGTGAGGCGTTGTTTCAAAATCGAGGTTC CGGTCAACTAGGAGCATGCGCCGGGTTGCTTCGTACAACTTGTTTGTACC CTTCAAGTAATCCCACCCGAAAATGCAGTCAACACAGTTGGTTCCGATAA AGATAAAAACTTCAATTCTTGGTGGAACCCCAGGAATACGTGGGTTCCGT TCATCGGAAAGTTTACAATTGGTTAATCATGTGTGTCGCCTCATCGAGCA ACGGGGTTTCGATGTTCGCAGTTTACGGTTCAGATTATTCACGGGAAGCA GCTGTTGGCATCCTTGTTATCACGTAACTTACGTCAACTAACATGTCATG AACTCCAGGGTCGAGTCGCGATGGCGAAGCGAGGCAGATGCCAAGGCGTC TGCACCCTTCACGTGGAAGGCATTCACGGAGAAGGTACCGGAGAGCGAAG CACAGCGGGCCACGGACGAGCAGAGCAAATTTCGGAGGTATGTGGTGCCA GTGGAGGGCTGCAAACCTCTCGTACCGCGAAGACACGTATCGCGAAGGCT TGAAGGCTTGAGATGGAGTTTCTTCAGAGATCACTAGAGATCCGGATCCG CAGGATCTCTTTACTATTTACTTCATTGGAGTTTCGGTGTTGTCTTTGGC CATGTCTTTGGCCATGTCTTTGGCGATGTCTTGGAGAGGAAAATGGTGTG TCATTAACGCTTCGTCTTGCCAAAGGTACCCACCCTCGTGGCGAGTGTCA AGGTTACCGGCGTCGTCAAATCGACCTCAGCTGAACAATCCGGGTAGTAG ACGACGAAATGCTCAAGTGGAGTATTCAAGATTGAAGGTTCGATGAGAGT GATCGAAGATCTCTCTTGCCAGAAGATTATAAGAGAATGCCCAGTGATCA TAGTACAAATACTCGAAGATATGGGTGGAAGAGCAAAGATTCGATCATGA GAAACTAGTGGCTCAAGATCCGAGGGATGAGGCCGAAGATACGTCAAACT ATCGTCTCGCTGTGGAGCAAACTTTCGCGCATTTTCGCTGTCGTCCATGT CTGACGCCCTTCTTATTTGAATGCTAATGTAGTTGTGTACCTCAAGTGCC CGTAATGCACGACACTCCCCCAAGCACTTGGGTGCCTCGTTGTAGACTGT GCGGTTCGTAGTTGGAGTTAGCCCAGGCAATAGCTTGTCTTTACTGATGG CACTATCTGAAGTTTCCTGTCGCTGGTTCCAAACGTTGGGAAATTGTGGG TTATGGCTGTCGAACGAGGTATGCGCGCTGTATAGCCGTGAAGGCCGAAA CAGTATGCCATATTGAATGGGTGTACTTGCTTTCAGTCACTCTTGCAGGA TATGGGTTGTTTTGTGGATGGATACCGACAGCAATCTCGCGCTTTGGTCT GACGAGCTGCTGTTTCGGTTCGGTATACGTAACTCTTGATGGCGATAGCT ACGTGCGGCTGGCCGGGAAGCTTGCCGGGGGTGATGAGGGCGCGGCGTTT CCCAACGCGGATCGGGCACTTTTCAGGGCTATCAACGCCGGCCGGGATGC AGCGAATGACGTCAGGCGGTGAGTTTTGGCGAAGAGGCGTTACGAAACTC GAGGCACCAGTTAAGCCGCACTATCTCTCAGGATCTTCGTGGTTTTCGAT ATCGTCATGGCGTTCGTTGTTGCTCGATTTCAATTCTAAATGCGATTTCT TCTCTCTAGGATCTGCACGATTTGTACCATCCACGCGATCTCGATGATTT ACGTGGAATGCGAAATTTTTATACCATTCGTGCCACTGGAAGATGCGAGC TTGTCTTTCAAGATTTGATGTTCACGCGTTCAGTGACCATGCGGTCTCGA ATCTTCGTCAGATCTTCGGATGTTATAAACCCGTGGATCAAGTCATTTAT CTACCCCAGGCTTGCGAAACGTTCTCGCCCTGGGTCCCGCCTCTATCAAA TGAAAGGGTCGGCTGGTCGACGCAACAGCAGTTATTGGATAAGGCGGTAG CAGAAACTTACCACACGAAAAATCGTCATGTCTAACTGTGCAAATCCGAA ATATCTCTCAGGGATCTGGAGCTTGTGGTGGGTAAGGTCGCAGACAAGGA CTGGAAGGAACTGACCACCCTCGCGAAGAATCTCCACTCATGGAGACGTT CGAGGGTTCAGGGGGCGAGGACGTCGAGGTCCCCTGGCGTGTCGCCGGCG AGAACGCTGTCCCAAGGTTGAGATGACCCATGGTTTTGTACGTTGGTTTC AAATAGACGAACCGGAAGGTTCATCGTGAAACGTTTGCAGGGCTATAGGT GGGCAAATCCTGGCAAAGGCAGTCGACTTCTCGTGGAGGCGTCATTTTCA CGGGGTTGAGATCATTATGTTCCCCACTCTGCACGCCTCGCAAGAGGTCT CGTGGCATGGACTGACTGTAGGGGGCTCTAGCACTGGGGTGTTGGAGAAT TTTTGTGGGATAGAGAGTCCATTTCCGTTACGTTAACCAGTTATCGGCAC GCCTCTGTAAGTTAGATGCAGATGTGTTCTAGTTTGGTTCGTGGGAGGGA TGTGCACTCAGCTAATAACAAGTGTCGGGATGTCACGTGAGGTGGCGTAT CGCGCTTGCTATCGAGCTCGAAGAAAAGGCGTGCAACGACATGCCATGAT TTCAAACCGTGCCTCATCAAGTTTTGTTATCTCAAACTCGTATCGTCGTA TGGGGTTGGATGGTTTTGTACGGACATGTTTGGTAAGCTACATTGACTGA GTACAAAACGGATTGACAGTGAATGGGGTCCAAGTAACGTTTGGTGATTG GGACGGTTGGAACTCATAGACTATACCCCGTACCTCGTACCTCGACAGGA GGATGGAG
back to top

Coding sequence (CDS) from alignment at D-dichotoma_M_contig923:115740..129897+

>mRNA_D-dichotoma_M_contig923.19971.1 ID=mRNA_D-dichotoma_M_contig923.19971.1|Name=mRNA_D-dichotoma_M_contig923.19971.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1086bp|location=Sequence derived from alignment at D-dichotoma_M_contig923:115740..129897+ (Dictyota dichotoma ODC1387m male)
ATGGGTGAAAAGGAAAGGGGCGGGGGGAAGCTAGTGGAGCGCTTACCTAT
GGGTGAAAAGGAAAGGGGCGGGGGGAAGCTAGTGGAGCGCTTACCTCCGC
GATTGTCCTCGGTCCTCCGAGTGGCTCAGCTGCCCGACGCACCCGTATTC
GATCTCGACAAGGAGATCCTGGAAAGGCAAAACCGCGATTGTCCTCGGTC
CTCCGAGTGGCTCAGCTGCCCGACGCACCCGTATTCGATCTCGACAAGGA
GATCCTGGAAAGGCAAAAGGTCGAGTCGCGATGGCGAAGCGAGGCAGATG
CCAAGGCGTCTGCACCCTTCACGTGGAAGGCATTCACGGAGAAGGTACCG
GAGAGCGAAGCACAGCGGGCCACGGACGAGCAGAGCAAATTTCGGAGGGT
CGAGTCGCGATGGCGAAGCGAGGCAGATGCCAAGGCGTCTGCACCCTTCA
CGTGGAAGGCATTCACGGAGAAGGTACCGGAGAGCGAAGCACAGCGGGCC
ACGGACGAGCAGAGCAAATTTCGGAGCTACGTGCGGCTGGCCGGGAAGCT
TGCCGGGGGTGATGAGGGCGCGGCGTTTCCCAACGCGGATCGGGCACTTT
TCAGGGCTATCAACGCCGGCCGGGATGCAGCGAATGACGTCAGGCGCTAC
GTGCGGCTGGCCGGGAAGCTTGCCGGGGGTGATGAGGGCGCGGCGTTTCC
CAACGCGGATCGGGCACTTTTCAGGGCTATCAACGCCGGCCGGGATGCAG
CGAATGACGTCAGGCGGGATCTGGAGCTTGTGGTGGGTAAGGTCGCAGAC
AAGGACTGGAAGGAACTGACCACCCTCGCGAAGAATCTCCACTCATGGAG
ACGTTCGAGGGTTCAGGGGGCGAGGACGTCGAGGTCCCCTGGCGTGTCGC
CGGCGAGAACGCTGTCCCAAGGTTGAGGATCTGGAGCTTGTGGTGGGTAA
GGTCGCAGACAAGGACTGGAAGGAACTGACCACCCTCGCGAAGAATCTCC
ACTCATGGAGACGTTCGAGGGTTCAGGGGGCGAGGACGTCGAGGTCCCCT
GGCGTGTCGCCGGCGAGAACGCTGTCCCAAGGTTGA
back to top