mRNA_D-dichotoma_M_contig922.19963.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig922.19963.1
Unique NamemRNA_D-dichotoma_M_contig922.19963.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: D7G4S2_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S2_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 1.510e-108
Identity = 181/216 (83.80%), Postives = 200/216 (92.59%), Query Frame = 1
Query:    1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPL-DCEGWLSDKMWGEILAASK 645
            ELEARREQLVLEDAENKRVQK++EDTIL+LL+NSEGNILDDEVLI TLAQSK+TSNVIERKVKEAAKTQEIIAKTR GY+PIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFE++I+KA K   LE+RL NLS CFT +LY NVCRSLFEKHKLLFSFLL++KIMQGE+R+D E LRFFLQGATSLDL+EPNPL + EGWL+DK WGEI+AA K
Sbjct: 3219 ELEARREQLVLEDAENKRVQKEIEDTILDLLKNSEGNILDDEVLISTLAQSKVTSNVIERKVKEAAKTQEIIAKTRTGYIPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFEMAIDKATKAHVLEDRLRNLSECFTAMLYKNVCRSLFEKHKLLFSFLLSVKIMQGEERMDGEELRFFLQGATSLDLEEPNPLANGEGWLTDKTWGEIIAAGK 3434          
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A6H5KQK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK6_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 2.150e-108
Identity = 179/216 (82.87%), Postives = 199/216 (92.13%), Query Frame = 1
Query:    1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPL-DCEGWLSDKMWGEILAASK 645
            ELEARREQLVLEDAENKRVQK++EDTIL+LL+NSEGNILDDEVLI TLAQSK+TSNVIERKVKEAAKTQE+IAKTR GY+PIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFE++I+KA K   LE+RL NLS CFT +LY NVCRSLFEKHKLLFSFLL++KIMQGE+R+D E LRFFLQGATSLDL+EPNPL + EGWL+DK WGEI+ A K
Sbjct:  779 ELEARREQLVLEDAENKRVQKEIEDTILDLLKNSEGNILDDEVLISTLAQSKVTSNVIERKVKEAAKTQEVIAKTRTGYIPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFEMAIDKATKAHVLEDRLRNLSECFTAMLYKNVCRSLFEKHKLLFSFLLSVKIMQGERRMDGEELRFFLQGATSLDLEEPNPLANGEGWLTDKTWGEIITAGK 994          
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A482S2A0_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2A0_9ARCH)

HSP 1 Score: 272 bits (695), Expect = 1.170e-83
Identity = 141/215 (65.58%), Postives = 175/215 (81.40%), Query Frame = 1
Query:    1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILAASK 645
            ELE +R+QL++EDAEN+R  K++ED IL LL+N+EGNILDDEVLI TLA SK TSN+I+ KVK A +TQ  IAK R GY+P+AF+ASQLFFCIADL +VDPMYQYSL+W+I+L+E+SIE+A K   L++RL NL+ CFT +LY NVCRSLFEK KLLFSFLLT KIM G+K L+   +RFFLQG TS++L EPNP   + WLSD  WG+ILA S+
Sbjct:  280 ELELQRQQLIVEDAENQRQLKEIEDKILFLLKNAEGNILDDEVLIDTLADSKKTSNIIQEKVKIAEQTQVRIAKVRQGYVPVAFQASQLFFCIADLASVDPMYQYSLDWYISLYEMSIEQAEKAKHLDDRLRNLNDCFTYILYRNVCRSLFEKDKLLFSFLLTTKIMLGQKTLEFSEMRFFLQGNTSMELPEPNPY--KDWLSDVAWGDILALSE 492          
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A7S1U4Y8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4Y8_9STRA)

HSP 1 Score: 263 bits (672), Expect = 9.960e-83
Identity = 138/217 (63.59%), Postives = 171/217 (78.80%), Query Frame = 1
Query:    1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILAASKTR 651
            +LEARR  LV EDA+NK+  K++ED IL LL+N+EGNILDDEVLI TL  SK+TSN+IE KVKEA KTQ+ IAK R+GY+P+AFRA+QLFFCIADL  VDPMYQYSLEWFINLF ++I KA KG + +ER++NL+  FT +LY NVCRSLF K KLLFSFLLTIKI++G+  LD + LRFFLQG+TSL++  P P   + WL D  W  +L  S+ +
Sbjct:   57 DLEARRVALVQEDADNKKQLKELEDKILTLLKNAEGNILDDEVLINTLKDSKVTSNIIEEKVKEAMKTQDKIAKVRLGYVPVAFRAAQLFFCIADLNIVDPMYQYSLEWFINLFLMAIAKAPKGSNHDERVENLNETFTYVLYENVCRSLFAKDKLLFSFLLTIKILKGDNLLDPKLLRFFLQGSTSLEVRRPKPEGTD-WLYDNAWLNLLGLSEMK 272          
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A7S3HU48_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HU48_9STRA)

HSP 1 Score: 269 bits (688), Expect = 1.030e-80
Identity = 139/212 (65.57%), Postives = 171/212 (80.66%), Query Frame = 1
Query:    1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILA 636
            ELE +R+QL++EDAEN+R  K++ED IL LL+N++GNILDDEVLI TL  SK TSN+I+ KVK A +TQ  IAK R+GY+P+AF+ASQLFFCIADL +VDPMYQYSL+W+I+L+E SIE A K   L++RL NL+ CFT +LY NVCRSLFEK KLLFSFLLT KIM G+K LD   +RFFLQG+TS+DL EPNP     WLSD+ W +ILA
Sbjct:  114 ELELQRQQLIVEDAENQRQLKEIEDKILFLLKNAKGNILDDEVLIDTLGDSKKTSNIIQDKVKIAEQTQARIAKVRMGYVPVAFQASQLFFCIADLASVDPMYQYSLDWYISLYETSIEAADKAKVLDDRLRNLNDCFTYMLYRNVCRSLFEKDKLLFSFLLTTKIMLGQKALDSAEVRFFLQGSTSMDLAEPNPFS---WLSDRAWNDILA 322          
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A7S4DA33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA33_HETAK)

HSP 1 Score: 271 bits (693), Expect = 2.450e-80
Identity = 143/216 (66.20%), Postives = 172/216 (79.63%), Query Frame = 1
Query:    4 LEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPS--LEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILAASK 645
            LEA+RE+LVLEDAENKR  K++ED IL LL+ +EGNILDDEVLI TLA+SK+T+N+IE KVK A KTQE I +TR GY+P+AFR SQLFFCIADLG +DPMYQYSL+WFI+LFE+SI++A    S  LE RL NL   FT +LY NVCRSLFEK KLLFSFLL  KIM G++ LD   LR+FLQG TS+DL +PNPL    WLSDK WG++L  ++
Sbjct:  904 LEAQREKLVLEDAENKRQLKEIEDKILHLLKTAEGNILDDEVLINTLAESKVTANLIEEKVKVATKTQETITRTRKGYIPVAFRVSQLFFCIADLGMIDPMYQYSLKWFIDLFEMSIDQAAGAASDPLETRLPNLKDSFTYILYKNVCRSLFEKDKLLFSFLLCTKIMLGDRTLDARELRYFLQGNTSMDLAKPNPLPGT-WLSDKCWGDVLGLAE 1118          
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A836CH21_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH21_9STRA)

HSP 1 Score: 271 bits (693), Expect = 2.560e-80
Identity = 145/209 (69.38%), Postives = 166/209 (79.43%), Query Frame = 1
Query:    1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGP--------------SLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNP 585
            ELEARRE LVLEDA N+R+QK+VEDTIL+LL+NS+GNILDDEVLI TLAQSK+T N IERKVKEAAKTQE +A+TR GY P+AFRASQLFFCIADL  VDPMYQYSLEWFINL+EL+I KA +                SLEERL  L+ CFT LLY N+CRSLFEK KLLFSFLL +K++ G  RLD   LRF LQGAT++DL+ PNP
Sbjct: 3274 ELEARREALVLEDAGNRRIQKEVEDTILDLLRNSQGNILDDEVLIDTLAQSKVTFNNIERKVKEAAKTQETMARTRRGYAPVAFRASQLFFCIADLNKVDPMYQYSLEWFINLYELAIAKASEDAAVLAASAGATASIISLEERLSRLNECFTHLLYANICRSLFEKDKLLFSFLLAVKVLGGSGRLDAGELRFLLQGATTMDLERPNP 3482          
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A7S3HTS3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTS3_9STRA)

HSP 1 Score: 269 bits (688), Expect = 1.200e-79
Identity = 139/212 (65.57%), Postives = 171/212 (80.66%), Query Frame = 1
Query:    1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILA 636
            ELE +R+QL++EDAEN+R  K++ED IL LL+N++GNILDDEVLI TL  SK TSN+I+ KVK A +TQ  IAK R+GY+P+AF+ASQLFFCIADL +VDPMYQYSL+W+I+L+E SIE A K   L++RL NL+ CFT +LY NVCRSLFEK KLLFSFLLT KIM G+K LD   +RFFLQG+TS+DL EPNP     WLSD+ W +ILA
Sbjct: 3075 ELELQRQQLIVEDAENQRQLKEIEDKILFLLKNAKGNILDDEVLIDTLGDSKKTSNIIQDKVKIAEQTQARIAKVRMGYVPVAFQASQLFFCIADLASVDPMYQYSLDWYISLYETSIEAADKAKVLDDRLRNLNDCFTYMLYRNVCRSLFEKDKLLFSFLLTTKIMLGQKALDSAEVRFFLQGSTSMDLAEPNPFS---WLSDRAWNDILA 3283          
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A8K1FHZ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHZ3_PYTOL)

HSP 1 Score: 250 bits (638), Expect = 6.300e-73
Identity = 127/213 (59.62%), Postives = 159/213 (74.65%), Query Frame = 1
Query:    4 LEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILAAS 642
            LE +RE+LVLEDA NK+  K++ED IL LLQ +EGNILDDE LI TL  SK+T+N IE KV+EAA TQ++IA+ R GY+P+AFRASQLFF IADL  +DPMYQY+LEWFINLF  +I +A K PSL  RL NL+  FT +LY NVCRSLFEK KLLF+FLLT+K++ G   ++   LR+F  G+T ++L  P P   + WLSDK W  +L  S
Sbjct: 3344 LETQREKLVLEDAANKKTLKEIEDKILYLLQTAEGNILDDERLIETLGASKITANKIEEKVREAAVTQQMIAEKRQGYLPVAFRASQLFFSIADLSVIDPMYQYALEWFINLFVFAISRAEKAPSLAARLVNLNDTFTFVLYQNVCRSLFEKDKLLFAFLLTVKVLVGNNTINTTELRYFFTGSTQMELSRPRPTGTDAWLSDKTWANLLGLS 3556          
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A662WSW5_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSW5_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.350e-72
Identity = 125/210 (59.52%), Postives = 158/210 (75.24%), Query Frame = 1
Query:    4 LEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEIL 633
            LE +RE+LVLEDA NK+  K++ED IL LLQ +EGNILDDE LI TL  SK+T+N IE KV+EAA TQ++IA+ R GY P+AFRASQLFFCIADL  +DPMYQY+LEWFINLF  SI +A     L  RL +L++ FT +LY NVCRSLFEK KLLF+FLL +KI+ G+  +D   LR+F  G+T ++L +P P   EGWL+DK W  ++
Sbjct:  626 LEQQREKLVLEDAANKKTLKEIEDQILYLLQTAEGNILDDERLIETLGASKITANKIEEKVREAAVTQQMIAEKRQGYAPVAFRASQLFFCIADLTVIDPMYQYALEWFINLFVFSIGRAESSNVLATRLAHLNSAFTYILYQNVCRSLFEKDKLLFAFLLAVKILVGDGSIDSAELRYFFTGSTQMELQKPKPAGSEGWLNDKTWANMI 835          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4S2_ECTSI1.510e-10883.80Dynein heavy chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5KQK6_9PHAE2.150e-10882.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482S2A0_9ARCH1.170e-8365.58Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S1U4Y8_9STRA9.960e-8363.59Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3HU48_9STRA1.030e-8065.57Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4DA33_HETAK2.450e-8066.20Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CH21_9STRA2.560e-8069.38Dynein heavy chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S3HTS3_9STRA1.200e-7965.57Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8K1FHZ3_PYTOL6.300e-7359.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WSW5_9STRA1.350e-7259.52Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig922contigD-dichotoma_M_contig922:210214..211159 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.5
Seed ortholog evalue1.7e-95
Seed eggNOG ortholog2880.D7G4S2
KEGG koko:K10408
KEGG Pathwayko05016,map05016
EggNOG free text desc.dynein light chain binding
EggNOG OGsCOG5245@1,KOG3595@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Hectar predicted targeting categoryother localisation
Exons3
Model size655
Cds size651
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig922.19963.1prot_D-dichotoma_M_contig922.19963.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig922 210214..211157 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931155.3459654-CDS-D-dichotoma_M_contig922:210213..2103391622931155.3459654-CDS-D-dichotoma_M_contig922:210213..210339Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig922 210214..210339 +
1690799639.9847982-CDS-D-dichotoma_M_contig922:210213..2103391690799639.9847982-CDS-D-dichotoma_M_contig922:210213..210339Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig922 210214..210339 +
1622931155.362748-CDS-D-dichotoma_M_contig922:210500..2106861622931155.362748-CDS-D-dichotoma_M_contig922:210500..210686Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig922 210501..210686 +
1690799640.0007696-CDS-D-dichotoma_M_contig922:210500..2106861690799640.0007696-CDS-D-dichotoma_M_contig922:210500..210686Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig922 210501..210686 +
1622931155.3774536-CDS-D-dichotoma_M_contig922:210818..2111571622931155.3774536-CDS-D-dichotoma_M_contig922:210818..211157Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig922 210819..211157 +
1690799640.0125978-CDS-D-dichotoma_M_contig922:210818..2111571690799640.0125978-CDS-D-dichotoma_M_contig922:210818..211157Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig922 210819..211157 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig922.19963.1

>prot_D-dichotoma_M_contig922.19963.1 ID=prot_D-dichotoma_M_contig922.19963.1|Name=mRNA_D-dichotoma_M_contig922.19963.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=217bp
ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQ
SKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVD
PMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSL
FEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEG
WLSDKMWGEILAASKTR
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mRNA from alignment at D-dichotoma_M_contig922:210214..211159+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig922.19963.1 ID=mRNA_D-dichotoma_M_contig922.19963.1|Name=mRNA_D-dichotoma_M_contig922.19963.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=946bp|location=Sequence derived from alignment at D-dichotoma_M_contig922:210214..211159+ (Dictyota dichotoma ODC1387m male)
GAACTAGAGGCCCGAAGGGAGCAACTTGTGTTAGAAGATGCAGAGAATAA GCGGGTGCAAAAAGATGTGGAGGACACGATACTTGAATTACTGCAAAACA GCGAAGGAAACATTCTCGACGATGAGGTAAGTTCTCATGTAGGTCAGGTG TCCTTGGTGTAGGCGACAAGCCAAGGGTAATTCTTAGGATTGCTGTTCAT TTTTCTTCTCTACAGACGACGATTGGAGTTTATTTTTGACATAGCTATCT CCATCACATCGTCCCCGTTGGGAATGAAATCATGTAGGTTTTAATCGGGA CATTGGCTCAATCGAAGATGACATCCAACGTGATCGAGCGCAAAGTGAAG GAGGCTGCGAAGACACAGGAAATCATTGCGAAGACGAGGATTGGCTATAT GCCAATTGCTTTCCGAGCATCTCAGCTCTTCTTCTGCATTGCGGACCTGG GTACGGTTGACCCGATGTATCAGGTACATTCCTTGCCCACCGAAAGACGT ATGCTTGCGATATTCCAGCAATTTAGCCTCGGTCGCACGGTTGTGCTTTG AGTCATTGCTTGCGGGGGTACCACCGAATGACGACGTCGACTGCCTGCTC CGCAGTACTCGCTCGAGTGGTTTATCAACCTCTTCGAGCTGTCAATTGAG AAGGCGGTGAAAGGTCCCAGCCTGGAGGAACGCTTGGACAACCTCAGCGC ATGTTTTACGGAGCTCCTGTACACGAATGTATGCCGGAGTTTATTCGAGA AGCATAAGCTTTTATTCTCGTTTCTCCTGACGATCAAGATCATGCAAGGA GAGAAGCGCCTTGACGAGGAAGGACTGAGGTTCTTTCTGCAGGGCGCAAC CAGTCTTGACCTCGACGAGCCTAATCCATTGGACTGCGAAGGATGGCTCT CCGACAAGATGTGGGGAGAAATACTTGCTGCTAGCAAGACAAGGGC
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig922:210214..211159+

>mRNA_D-dichotoma_M_contig922.19963.1 ID=mRNA_D-dichotoma_M_contig922.19963.1|Name=mRNA_D-dichotoma_M_contig922.19963.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1302bp|location=Sequence derived from alignment at D-dichotoma_M_contig922:210214..211159+ (Dictyota dichotoma ODC1387m male)
GAACTAGAGGCCCGAAGGGAGCAACTTGTGTTAGAAGATGCAGAGAATAA
GCGGGTGCAAAAAGATGTGGAGGACACGATACTTGAATTACTGCAAAACA
GCGAAGGAAACATTCTCGACGATGAGGAACTAGAGGCCCGAAGGGAGCAA
CTTGTGTTAGAAGATGCAGAGAATAAGCGGGTGCAAAAAGATGTGGAGGA
CACGATACTTGAATTACTGCAAAACAGCGAAGGAAACATTCTCGACGATG
AGGTTTTAATCGGGACATTGGCTCAATCGAAGATGACATCCAACGTGATC
GAGCGCAAAGTGAAGGAGGCTGCGAAGACACAGGAAATCATTGCGAAGAC
GAGGATTGGCTATATGCCAATTGCTTTCCGAGCATCTCAGCTCTTCTTCT
GCATTGCGGACCTGGGTACGGTTGACCCGATGTATCAGGTTTTAATCGGG
ACATTGGCTCAATCGAAGATGACATCCAACGTGATCGAGCGCAAAGTGAA
GGAGGCTGCGAAGACACAGGAAATCATTGCGAAGACGAGGATTGGCTATA
TGCCAATTGCTTTCCGAGCATCTCAGCTCTTCTTCTGCATTGCGGACCTG
GGTACGGTTGACCCGATGTATCAGTACTCGCTCGAGTGGTTTATCAACCT
CTTCGAGCTGTCAATTGAGAAGGCGGTGAAAGGTCCCAGCCTGGAGGAAC
GCTTGGACAACCTCAGCGCATGTTTTACGGAGCTCCTGTACACGAATGTA
TGCCGGAGTTTATTCGAGAAGCATAAGCTTTTATTCTCGTTTCTCCTGAC
GATCAAGATCATGCAAGGAGAGAAGCGCCTTGACGAGGAAGGACTGAGGT
TCTTTCTGCAGGGCGCAACCAGTCTTGACCTCGACGAGCCTAATCCATTG
GACTGCGAAGGATGGCTCTCCGACAAGATGTGGGGAGAAATACTTGCTGC
TAGCAAGACAAGGTACTCGCTCGAGTGGTTTATCAACCTCTTCGAGCTGT
CAATTGAGAAGGCGGTGAAAGGTCCCAGCCTGGAGGAACGCTTGGACAAC
CTCAGCGCATGTTTTACGGAGCTCCTGTACACGAATGTATGCCGGAGTTT
ATTCGAGAAGCATAAGCTTTTATTCTCGTTTCTCCTGACGATCAAGATCA
TGCAAGGAGAGAAGCGCCTTGACGAGGAAGGACTGAGGTTCTTTCTGCAG
GGCGCAACCAGTCTTGACCTCGACGAGCCTAATCCATTGGACTGCGAAGG
ATGGCTCTCCGACAAGATGTGGGGAGAAATACTTGCTGCTAGCAAGACAA
GG
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