mRNA_D-dichotoma_M_contig922.19963.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: D7G4S2_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S2_ECTSI) HSP 1 Score: 352 bits (903), Expect = 1.510e-108 Identity = 181/216 (83.80%), Postives = 200/216 (92.59%), Query Frame = 1
Query: 1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPL-DCEGWLSDKMWGEILAASK 645
ELEARREQLVLEDAENKRVQK++EDTIL+LL+NSEGNILDDEVLI TLAQSK+TSNVIERKVKEAAKTQEIIAKTR GY+PIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFE++I+KA K LE+RL NLS CFT +LY NVCRSLFEKHKLLFSFLL++KIMQGE+R+D E LRFFLQGATSLDL+EPNPL + EGWL+DK WGEI+AA K
Sbjct: 3219 ELEARREQLVLEDAENKRVQKEIEDTILDLLKNSEGNILDDEVLISTLAQSKVTSNVIERKVKEAAKTQEIIAKTRTGYIPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFEMAIDKATKAHVLEDRLRNLSECFTAMLYKNVCRSLFEKHKLLFSFLLSVKIMQGEERMDGEELRFFLQGATSLDLEEPNPLANGEGWLTDKTWGEIIAAGK 3434
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A6H5KQK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK6_9PHAE) HSP 1 Score: 350 bits (899), Expect = 2.150e-108 Identity = 179/216 (82.87%), Postives = 199/216 (92.13%), Query Frame = 1
Query: 1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPL-DCEGWLSDKMWGEILAASK 645
ELEARREQLVLEDAENKRVQK++EDTIL+LL+NSEGNILDDEVLI TLAQSK+TSNVIERKVKEAAKTQE+IAKTR GY+PIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFE++I+KA K LE+RL NLS CFT +LY NVCRSLFEKHKLLFSFLL++KIMQGE+R+D E LRFFLQGATSLDL+EPNPL + EGWL+DK WGEI+ A K
Sbjct: 779 ELEARREQLVLEDAENKRVQKEIEDTILDLLKNSEGNILDDEVLISTLAQSKVTSNVIERKVKEAAKTQEVIAKTRTGYIPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFEMAIDKATKAHVLEDRLRNLSECFTAMLYKNVCRSLFEKHKLLFSFLLSVKIMQGERRMDGEELRFFLQGATSLDLEEPNPLANGEGWLTDKTWGEIITAGK 994
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A482S2A0_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2A0_9ARCH) HSP 1 Score: 272 bits (695), Expect = 1.170e-83 Identity = 141/215 (65.58%), Postives = 175/215 (81.40%), Query Frame = 1
Query: 1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILAASK 645
ELE +R+QL++EDAEN+R K++ED IL LL+N+EGNILDDEVLI TLA SK TSN+I+ KVK A +TQ IAK R GY+P+AF+ASQLFFCIADL +VDPMYQYSL+W+I+L+E+SIE+A K L++RL NL+ CFT +LY NVCRSLFEK KLLFSFLLT KIM G+K L+ +RFFLQG TS++L EPNP + WLSD WG+ILA S+
Sbjct: 280 ELELQRQQLIVEDAENQRQLKEIEDKILFLLKNAEGNILDDEVLIDTLADSKKTSNIIQEKVKIAEQTQVRIAKVRQGYVPVAFQASQLFFCIADLASVDPMYQYSLDWYISLYEMSIEQAEKAKHLDDRLRNLNDCFTYILYRNVCRSLFEKDKLLFSFLLTTKIMLGQKTLEFSEMRFFLQGNTSMELPEPNPY--KDWLSDVAWGDILALSE 492
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A7S1U4Y8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4Y8_9STRA) HSP 1 Score: 263 bits (672), Expect = 9.960e-83 Identity = 138/217 (63.59%), Postives = 171/217 (78.80%), Query Frame = 1
Query: 1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILAASKTR 651
+LEARR LV EDA+NK+ K++ED IL LL+N+EGNILDDEVLI TL SK+TSN+IE KVKEA KTQ+ IAK R+GY+P+AFRA+QLFFCIADL VDPMYQYSLEWFINLF ++I KA KG + +ER++NL+ FT +LY NVCRSLF K KLLFSFLLTIKI++G+ LD + LRFFLQG+TSL++ P P + WL D W +L S+ +
Sbjct: 57 DLEARRVALVQEDADNKKQLKELEDKILTLLKNAEGNILDDEVLINTLKDSKVTSNIIEEKVKEAMKTQDKIAKVRLGYVPVAFRAAQLFFCIADLNIVDPMYQYSLEWFINLFLMAIAKAPKGSNHDERVENLNETFTYVLYENVCRSLFAKDKLLFSFLLTIKILKGDNLLDPKLLRFFLQGSTSLEVRRPKPEGTD-WLYDNAWLNLLGLSEMK 272
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A7S3HU48_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HU48_9STRA) HSP 1 Score: 269 bits (688), Expect = 1.030e-80 Identity = 139/212 (65.57%), Postives = 171/212 (80.66%), Query Frame = 1
Query: 1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILA 636
ELE +R+QL++EDAEN+R K++ED IL LL+N++GNILDDEVLI TL SK TSN+I+ KVK A +TQ IAK R+GY+P+AF+ASQLFFCIADL +VDPMYQYSL+W+I+L+E SIE A K L++RL NL+ CFT +LY NVCRSLFEK KLLFSFLLT KIM G+K LD +RFFLQG+TS+DL EPNP WLSD+ W +ILA
Sbjct: 114 ELELQRQQLIVEDAENQRQLKEIEDKILFLLKNAKGNILDDEVLIDTLGDSKKTSNIIQDKVKIAEQTQARIAKVRMGYVPVAFQASQLFFCIADLASVDPMYQYSLDWYISLYETSIEAADKAKVLDDRLRNLNDCFTYMLYRNVCRSLFEKDKLLFSFLLTTKIMLGQKALDSAEVRFFLQGSTSMDLAEPNPFS---WLSDRAWNDILA 322
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A7S4DA33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA33_HETAK) HSP 1 Score: 271 bits (693), Expect = 2.450e-80 Identity = 143/216 (66.20%), Postives = 172/216 (79.63%), Query Frame = 1
Query: 4 LEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPS--LEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILAASK 645
LEA+RE+LVLEDAENKR K++ED IL LL+ +EGNILDDEVLI TLA+SK+T+N+IE KVK A KTQE I +TR GY+P+AFR SQLFFCIADLG +DPMYQYSL+WFI+LFE+SI++A S LE RL NL FT +LY NVCRSLFEK KLLFSFLL KIM G++ LD LR+FLQG TS+DL +PNPL WLSDK WG++L ++
Sbjct: 904 LEAQREKLVLEDAENKRQLKEIEDKILHLLKTAEGNILDDEVLINTLAESKVTANLIEEKVKVATKTQETITRTRKGYIPVAFRVSQLFFCIADLGMIDPMYQYSLKWFIDLFEMSIDQAAGAASDPLETRLPNLKDSFTYILYKNVCRSLFEKDKLLFSFLLCTKIMLGDRTLDARELRYFLQGNTSMDLAKPNPLPGT-WLSDKCWGDVLGLAE 1118
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A836CH21_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH21_9STRA) HSP 1 Score: 271 bits (693), Expect = 2.560e-80 Identity = 145/209 (69.38%), Postives = 166/209 (79.43%), Query Frame = 1
Query: 1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGP--------------SLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNP 585
ELEARRE LVLEDA N+R+QK+VEDTIL+LL+NS+GNILDDEVLI TLAQSK+T N IERKVKEAAKTQE +A+TR GY P+AFRASQLFFCIADL VDPMYQYSLEWFINL+EL+I KA + SLEERL L+ CFT LLY N+CRSLFEK KLLFSFLL +K++ G RLD LRF LQGAT++DL+ PNP
Sbjct: 3274 ELEARREALVLEDAGNRRIQKEVEDTILDLLRNSQGNILDDEVLIDTLAQSKVTFNNIERKVKEAAKTQETMARTRRGYAPVAFRASQLFFCIADLNKVDPMYQYSLEWFINLYELAIAKASEDAAVLAASAGATASIISLEERLSRLNECFTHLLYANICRSLFEKDKLLFSFLLAVKVLGGSGRLDAGELRFLLQGATTMDLERPNP 3482
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A7S3HTS3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTS3_9STRA) HSP 1 Score: 269 bits (688), Expect = 1.200e-79 Identity = 139/212 (65.57%), Postives = 171/212 (80.66%), Query Frame = 1
Query: 1 ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILA 636
ELE +R+QL++EDAEN+R K++ED IL LL+N++GNILDDEVLI TL SK TSN+I+ KVK A +TQ IAK R+GY+P+AF+ASQLFFCIADL +VDPMYQYSL+W+I+L+E SIE A K L++RL NL+ CFT +LY NVCRSLFEK KLLFSFLLT KIM G+K LD +RFFLQG+TS+DL EPNP WLSD+ W +ILA
Sbjct: 3075 ELELQRQQLIVEDAENQRQLKEIEDKILFLLKNAKGNILDDEVLIDTLGDSKKTSNIIQDKVKIAEQTQARIAKVRMGYVPVAFQASQLFFCIADLASVDPMYQYSLDWYISLYETSIEAADKAKVLDDRLRNLNDCFTYMLYRNVCRSLFEKDKLLFSFLLTTKIMLGQKALDSAEVRFFLQGSTSMDLAEPNPFS---WLSDRAWNDILA 3283
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A8K1FHZ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHZ3_PYTOL) HSP 1 Score: 250 bits (638), Expect = 6.300e-73 Identity = 127/213 (59.62%), Postives = 159/213 (74.65%), Query Frame = 1
Query: 4 LEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEILAAS 642
LE +RE+LVLEDA NK+ K++ED IL LLQ +EGNILDDE LI TL SK+T+N IE KV+EAA TQ++IA+ R GY+P+AFRASQLFF IADL +DPMYQY+LEWFINLF +I +A K PSL RL NL+ FT +LY NVCRSLFEK KLLF+FLLT+K++ G ++ LR+F G+T ++L P P + WLSDK W +L S
Sbjct: 3344 LETQREKLVLEDAANKKTLKEIEDKILYLLQTAEGNILDDERLIETLGASKITANKIEEKVREAAVTQQMIAEKRQGYLPVAFRASQLFFSIADLSVIDPMYQYALEWFINLFVFAISRAEKAPSLAARLVNLNDTFTFVLYQNVCRSLFEKDKLLFAFLLTVKVLVGNNTINTTELRYFFTGSTQMELSRPRPTGTDAWLSDKTWANLLGLS 3556
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Match: A0A662WSW5_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSW5_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.350e-72 Identity = 125/210 (59.52%), Postives = 158/210 (75.24%), Query Frame = 1
Query: 4 LEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQSKMTSNVIERKVKEAAKTQEIIAKTRIGYMPIAFRASQLFFCIADLGTVDPMYQYSLEWFINLFELSIEKAVKGPSLEERLDNLSACFTELLYTNVCRSLFEKHKLLFSFLLTIKIMQGEKRLDEEGLRFFLQGATSLDLDEPNPLDCEGWLSDKMWGEIL 633
LE +RE+LVLEDA NK+ K++ED IL LLQ +EGNILDDE LI TL SK+T+N IE KV+EAA TQ++IA+ R GY P+AFRASQLFFCIADL +DPMYQY+LEWFINLF SI +A L RL +L++ FT +LY NVCRSLFEK KLLF+FLL +KI+ G+ +D LR+F G+T ++L +P P EGWL+DK W ++
Sbjct: 626 LEQQREKLVLEDAANKKTLKEIEDQILYLLQTAEGNILDDERLIETLGASKITANKIEEKVREAAVTQQMIAEKRQGYAPVAFRASQLFFCIADLTVIDPMYQYALEWFINLFVFSIGRAESSNVLATRLAHLNSAFTYILYQNVCRSLFEKDKLLFAFLLAVKILVGDGSIDSAELRYFFTGSTQMELQKPKPAGSEGWLNDKTWANMI 835 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig922.19963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig922.19963.1 >prot_D-dichotoma_M_contig922.19963.1 ID=prot_D-dichotoma_M_contig922.19963.1|Name=mRNA_D-dichotoma_M_contig922.19963.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=217bp ELEARREQLVLEDAENKRVQKDVEDTILELLQNSEGNILDDEVLIGTLAQback to top mRNA from alignment at D-dichotoma_M_contig922:210214..211159+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig922.19963.1 ID=mRNA_D-dichotoma_M_contig922.19963.1|Name=mRNA_D-dichotoma_M_contig922.19963.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=946bp|location=Sequence derived from alignment at D-dichotoma_M_contig922:210214..211159+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig922:210214..211159+ >mRNA_D-dichotoma_M_contig922.19963.1 ID=mRNA_D-dichotoma_M_contig922.19963.1|Name=mRNA_D-dichotoma_M_contig922.19963.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1302bp|location=Sequence derived from alignment at D-dichotoma_M_contig922:210214..211159+ (Dictyota dichotoma ODC1387m male)back to top |