mRNA_D-dichotoma_M_contig922.19962.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Match: D7G4S2_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4S2_ECTSI) HSP 1 Score: 187 bits (476), Expect = 3.850e-52 Identity = 134/158 (84.81%), Postives = 149/158 (94.30%), Query Frame = 1
Query: 1 VETRYVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALAEAEAKLVEAMSELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEKSSWARFSSDLQIKYENITGDMTLSAGLIAYMGAFTSLY 474
V+T Y DT+FDP+KVKKGSVAAAGLCKWVHAMVVYNRVAKVV PKRAALAEAE+ L +AMS+LGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEK++WARFS +LQ +YEN+TGD+TLS+G+IAYMGAFTS +
Sbjct: 2862 VKTGYTDDTDFDPDKVKKGSVAAAGLCKWVHAMVVYNRVAKVVGPKRAALAEAESTLAQAMSDLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEKTAWARFSGELQNRYENVTGDITLSSGVIAYMGAFTSSF 3019
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Match: A0A6H5KQK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK6_9PHAE) HSP 1 Score: 176 bits (445), Expect = 5.520e-48 Identity = 97/173 (56.07%), Postives = 112/173 (64.74%), Query Frame = 1
Query: 1 VETRYVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALAEAEAKLVEAMSELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------CGNKLRRAEQLISGLGGEKSSWARFSSDLQIKYENITGDMTLSAGLIAYMGAFTSLY 474
V+T Y DT+FDP+KVKKGSVAAAGLCKWVHAMVVYNRVAKVV PKRAAL EAE+ L +AMS+LG CGNKLRRAEQLISGLGGEK++WARFS +LQ +YEN+TGD+TLS+G+IAYMGAFTS +
Sbjct: 407 VKTGYTDDTDFDPDKVKKGSVAAAGLCKWVHAMVVYNRVAKVVGPKRAALEEAESTLAQAMSDLGEKQAMLKARDATKNYYFENDVMDLMDKLATLQQQLQEAEDKKVALQDQVTDCGNKLRRAEQLISGLGGEKTAWARFSGELQNRYENVTGDITLSSGVIAYMGAFTSSF 579
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Match: A0A836CH21_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH21_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.580e-43 Identity = 123/154 (79.87%), Postives = 138/154 (89.61%), Query Frame = 1
Query: 13 YVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALAEAEAKLVEAMSELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEKSSWARFSSDLQIKYENITGDMTLSAGLIAYMGAFTSLY 474
Y + +FDP+KV+ GSVAAAGLCKWVHAMVVY+RVA+VV PKRAALAEAEA L +AM EL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC NKLRRAEQLISGLGGEK+SW+R S+DL KY N+TGD+ L+AG+IAY+GAFTS Y
Sbjct: 2921 YTTNPDFDPDKVRHGSVAAAGLCKWVHAMVVYDRVARVVGPKRAALAEAEATLSKAMGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSNKLRRAEQLISGLGGEKASWSRLSADLLEKYNNVTGDIMLAAGVIAYLGAFTSAY 3074
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Match: A0A1U7UX27_CARSF (dynein heavy chain 12, axonemal n=1 Tax=Carlito syrichta TaxID=1868482 RepID=A0A1U7UX27_CARSF) HSP 1 Score: 138 bits (348), Expect = 6.310e-35 Identity = 109/154 (70.78%), Postives = 123/154 (79.87%), Query Frame = 1
Query: 13 YVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALAEAEAKLVEAMSELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEKSSWARFSSDLQIKYENITGDMTLSAGLIAYMGAFTSLY 474
Y+ + EFDP KV K S AA GLCKW+ AM VY+RVAKVVAPK+A LAEA+ L E M L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX C KL RA QLI GLGGEKS WA+ + DLQI YEN+TGD+ +SAG+IAY+GAFTS +
Sbjct: 854 YLTNPEFDPPKVAKASSAAEGLCKWIMAMEVYDRVAKVVAPKKARLAEAQKSLAETMELLNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELCAKKLERASQLIGGLGGEKSRWAQAADDLQITYENLTGDVLVSAGVIAYLGAFTSAF 1007
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Match: UPI0005D02A22 (dynein axonemal heavy chain 12 isoform X6 n=1 Tax=Homo sapiens TaxID=9606 RepID=UPI0005D02A22) HSP 1 Score: 138 bits (347), Expect = 8.740e-35 Identity = 75/156 (48.08%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 1 VETRYVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALAEAEAKLVEAMSELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEKSSWARFSSDLQIKYENITGDMTLSAGLIAYMGAFTS 468
+ + Y+ + EFDP KV K S AA GLCKW+ AM VY+RVAKVVAPK+A L+EA+ L E M L C KL RA QLI GLGGEKS WA+ + DLQI YEN+TGD+ +SAG+IAY+GAFTS
Sbjct: 2701 IRSEYLMNPEFDPPKVAKASSAAEGLCKWIMAMEVYDRVAKVVAPKKARLSEAQKSLAETMELLNQKRAELAEVEHHLENLQMTFLEKTEEKAALEDQVELCAKKLERASQLIGGLGGEKSRWAQAADDLQITYENLTGDVLVSAGVIAYLGAFTS 2856
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Match: A0A2K6K692_RHIBE (Uncharacterized protein n=1 Tax=Rhinopithecus bieti TaxID=61621 RepID=A0A2K6K692_RHIBE) HSP 1 Score: 137 bits (346), Expect = 1.200e-34 Identity = 75/156 (48.08%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 1 VETRYVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALAEAEAKLVEAMSELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEKSSWARFSSDLQIKYENITGDMTLSAGLIAYMGAFTS 468
+ + Y+ + EFDP KV K S AA GLCKW+ AM VY+RVAKVVAPK+A L+EA+ L E M L C KL RA QLI GLGGEKS WA+ + DLQI YEN+TGD+ +SAG+IAY+GAFTS
Sbjct: 2543 IRSEYLTNPEFDPPKVAKASSAAEGLCKWIMAMEVYDRVAKVVAPKKARLSEAQKSLAETMELLNQKRAELAEVEHHLENLQMTFLEKTEEKAALEDQVELCAKKLERASQLIGGLGGEKSRWAQAADDLQITYENLTGDVLVSAGVIAYLGAFTS 2698
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Match: A0A2K6K690_RHIBE (Uncharacterized protein n=1 Tax=Rhinopithecus bieti TaxID=61621 RepID=A0A2K6K690_RHIBE) HSP 1 Score: 137 bits (346), Expect = 1.200e-34 Identity = 75/156 (48.08%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 1 VETRYVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALAEAEAKLVEAMSELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEKSSWARFSSDLQIKYENITGDMTLSAGLIAYMGAFTS 468
+ + Y+ + EFDP KV K S AA GLCKW+ AM VY+RVAKVVAPK+A L+EA+ L E M L C KL RA QLI GLGGEKS WA+ + DLQI YEN+TGD+ +SAG+IAY+GAFTS
Sbjct: 2567 IRSEYLTNPEFDPPKVAKASSAAEGLCKWIMAMEVYDRVAKVVAPKKARLSEAQKSLAETMELLNQKRAELAEVEHHLENLQMTFLEKTEEKAALEDQVELCAKKLERASQLIGGLGGEKSRWAQAADDLQITYENLTGDVLVSAGVIAYLGAFTS 2722
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Match: A0A091CLY6_FUKDA (Dynein heavy chain 7, axonemal n=2 Tax=Fukomys damarensis TaxID=885580 RepID=A0A091CLY6_FUKDA) HSP 1 Score: 137 bits (346), Expect = 1.200e-34 Identity = 107/152 (70.39%), Postives = 121/152 (79.61%), Query Frame = 1
Query: 13 YVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALAEAEAKLVEAMSELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEKSSWARFSSDLQIKYENITGDMTLSAGLIAYMGAFTS 468
Y+ + EFDP KV K S AA GLCKW+ AM VY+RVAKVVAPK+A LAEA+ L E M L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX C KL+RA QLI GLGGEKS WA+ + DLQI YEN+TGD+ +SAG+IAY+GAFTS
Sbjct: 2571 YLTNPEFDPPKVAKASSAAEGLCKWIMAMEVYDRVAKVVAPKKARLAEAQKSLAETMELLNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVELCAKKLQRASQLIGGLGGEKSRWAQAAHDLQITYENLTGDVLVSAGVIAYLGAFTS 2722
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Match: UPI0003F0BE03 (dynein heavy chain 12, axonemal n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0BE03) HSP 1 Score: 137 bits (346), Expect = 1.200e-34 Identity = 104/156 (66.67%), Postives = 122/156 (78.21%), Query Frame = 1
Query: 1 VETRYVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALAEAEAKLVEAMSELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEKSSWARFSSDLQIKYENITGDMTLSAGLIAYMGAFTS 468
+ + Y+ + EFDP K+ K S AA GLCKW+ AM VY+RVAKVVAPK+A LA+A+ L E M L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX C KL RA QLI GLGGEKS WA+ ++DLQI YEN+TGD+ +SAG+IAY+GAFTS
Sbjct: 2672 IRSEYLTNPEFDPSKIAKASSAAEGLCKWIMAMEVYDRVAKVVAPKKARLADAQKSLAETMELLNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQVELCAKKLERASQLIGGLGGEKSRWAQAAADLQIVYENLTGDVLVSAGVIAYLGAFTS 2827
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Match: UPI00083C2843 (LOW QUALITY PROTEIN: dynein heavy chain 12, axonemal n=1 Tax=Rhinopithecus bieti TaxID=61621 RepID=UPI00083C2843) HSP 1 Score: 137 bits (346), Expect = 1.200e-34 Identity = 75/156 (48.08%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 1 VETRYVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALAEAEAKLVEAMSELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGNKLRRAEQLISGLGGEKSSWARFSSDLQIKYENITGDMTLSAGLIAYMGAFTS 468
+ + Y+ + EFDP KV K S AA GLCKW+ AM VY+RVAKVVAPK+A L+EA+ L E M L C KL RA QLI GLGGEKS WA+ + DLQI YEN+TGD+ +SAG+IAY+GAFTS
Sbjct: 2663 IRSEYLTNPEFDPPKVAKASSAAEGLCKWIMAMEVYDRVAKVVAPKKARLSEAQKSLAETMELLNQKRAELAEVEHHLENLQMTFLEKTEEKAALEDQVELCAKKLERASQLIGGLGGEKSRWAQAADDLQITYENLTGDVLVSAGVIAYLGAFTS 2818 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig922.19962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig922.19962.1 >prot_D-dichotoma_M_contig922.19962.1 ID=prot_D-dichotoma_M_contig922.19962.1|Name=mRNA_D-dichotoma_M_contig922.19962.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=158bp VETRYVQDTEFDPEKVKKGSVAAAGLCKWVHAMVVYNRVAKVVAPKRAALback to top mRNA from alignment at D-dichotoma_M_contig922:205690..208999+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig922.19962.1 ID=mRNA_D-dichotoma_M_contig922.19962.1|Name=mRNA_D-dichotoma_M_contig922.19962.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=3310bp|location=Sequence derived from alignment at D-dichotoma_M_contig922:205690..208999+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig922:205690..208999+ >mRNA_D-dichotoma_M_contig922.19962.1 ID=mRNA_D-dichotoma_M_contig922.19962.1|Name=mRNA_D-dichotoma_M_contig922.19962.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=948bp|location=Sequence derived from alignment at D-dichotoma_M_contig922:205690..208999+ (Dictyota dichotoma ODC1387m male)back to top |