mRNA_D-dichotoma_M_contig921.19951.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig921.19951.1 vs. uniprot
Match: D7FKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD5_ECTSI) HSP 1 Score: 518 bits (1335), Expect = 2.350e-168 Identity = 350/855 (40.94%), Postives = 487/855 (56.96%), Query Frame = 1
Query: 10 KEGTRVDCLFGDEYFRGTVE-VSGDGLC-RVNFDDGDVRDNVPPEDIAVPLLVGCRVESLFEDEEGYFRGTIDGDNGDGTYTVHFDDGDVLEAAPRGDIRVLSDLDCTSHEEHLTNKLEKRHESSRNVAVESG----------EHDECATEGT---QKDTSNHLDRVAVDASGEGSP----HAAKGWPVCMTRA------FLTAAGEPHETRL---GPRDEQSPEGSEFRAAVTCSEDGIDSSTAHGDQWNPHLADDPPVFLSGAENKLHGFIENLARRGSAM-DNVPPDYRLLVVSYKIAIVEKKLMNLVRTGSA------GINTP-----PALGGD-DRFAAETTDRCRAKASTGRSQPSFFISPTILPSTTLRASLCRIARHVSYLTRKKSVALVRLCYGDSSKQMAQALCDLASAYAEDGLWPQVAHHVARASNILAREVEDSAGGHNKYNTRSEANAS--------ASHIPMIIDKPI--------AARLTFCSQP-YTNPAMSELLGARRCARAILDIILILRSLARVTGNK---VRREEFQAQLSSHPDEELRVALQSISDTLVLPDLCEWWEALGCLRRSSRLFTDLTIKVLEGARWKEVGQVLLAFQDVDPKGTGFADRQVISLVVLDDEAQE--ESKTSLSGRRL-CLLTVRVQTLMGRCKTHMGAFSAACNGLTGTLRYLESLHLGDNSISYVPVLTALASALVGSHRQQLEKTTGRAKRVADKWIKGKEGQRIWKEQECKRLQGECRRRLEVVSRAEVEARTWQALAAHKVKSISRELAGQCRQMDQAEESMVRAWEIRESRYGRYHAQVASVLVGLGNLAVLRQQHKEAEDWFRRALETYEV 2382
++GTRVDCLFGDEYFRG V+ G G RV FDDGD+R++ PPED+ +PL GCRVE +FE E+GYF G I DNGD TY V FDDGDVL+AAPR DIRVLS SHEE +K +++ NVA + G H+E +EG QKD N +V A GE P H + P + + A EP T PR S G R + + + + ++ ++ L +++ + N LH +E LA + PPD+RL +S++IA++E++L G A TP P+L G +R ++ G + + PS A L ++A +S L R K +ALVRLCYGD+S +M QA+ DLA YA++ LWPQV++H+ARA++ILAR+ G+ + T + + H + D+P A L F ++ Y++PA+ L R AR +L+++ LR L+ V G + V RE F+A LS+H D+ LR A + +P C W ALGCLRR+S LF DL +K++EG + K+ +V LAFQ VDP GTG A+ ++++L+V DDE + E + ++ +RL LL VRVQTL GRC+TH +AA L+ L LE L LG+ S S VPVL AL AL +HR+ E ++ +AK++A+ WI+GKEGQ +WK QECKRL ECRRRLEVV RAE+E RTWQAL A++ K ++REL G+ +++D AE+ +VR WEI ESR+GR V + V LG+LAV+R++ EA DWFRRAL T+E
Sbjct: 10 RKGTRVDCLFGDEYFRGKVDDTDGSGSSYRVIFDDGDIREDAPPEDLELPLEQGCRVECMFEGEDGYFDGVISIDNGDATYKVDFDDGDVLDAAPRHDIRVLS----WSHEESAPSKAVTAEDNNTNVAEQEGTGFDTRYSDRSHNEAESEGNREAQKDDENS--KVISAAHGELPPVEETHDSPRQPQRFSEVDGSEDGYGRAGDEPAGTSQHGSSPRHLGSSSGEPQRIHDSWTGRELRGTLSNRNEPTTELVQASSLYVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIAVLEEQLRQQEARGEAWHLPVFSAETPLHPADPSLRGRLERQGRSDPEQATGSGGEGSPRATTARGGAAAPSFPAHAELRQVAEDLSTL-RMKQIALVRLCYGDASLEMVQAIADLADGYAKEDLWPQVSNHMARAADILARDKGSRVPGNGFFITATPGGGTYVDPRLRFKGHSGLRGDEPRGGYPEGQRARGLAFPTENRYSDPALCRSLTQARSARLLLELLKGLR-LSVVEGGERGQVERENFEAFLSTHKDKALRSARHRLLLEAQMPSNCGWGAALGCLRRNSPLFADLNLKIMEGVQQKQAAKVRLAFQAVDPDGTGCAESEILALMVADDEEETAVEGRVGVAWQRLRSLLHVRVQTLTGRCETHTNRLAAASRNLSEALAELERLGLGEASGS-VPVLNALTDALALTHRRHQEMSSIKAKKLAETWIQGKEGQDLWK-QECKRLVLECRRRLEVVPRAEIEERTWQALVAYRSKILTRELGGKGKELDTAEDYLVRVWEILESRHGRNDPDVGAACVSLGSLAVIRRRLNEAIDWFRRALGTFEA 854
BLAST of mRNA_D-dichotoma_M_contig921.19951.1 vs. uniprot
Match: A0A6H5JCV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV6_9PHAE) HSP 1 Score: 147 bits (370), Expect = 8.780e-33 Identity = 86/194 (44.33%), Postives = 111/194 (57.22%), Query Frame = 1
Query: 10 KEGTRVDCLFGDEYFRGTVEVS--GDGLCRVNFDDGDVRDNVPPEDIAVPLLVGCRVESLFEDEEGYFRGTIDGDNGDGTYTVHFDDGDVLEAAPRGDIRVLSDLDCTSHEEHLTNKLEKRHESSRNVAVESGE----------HDECATEGTQKDTSNHLDRVAVDAS-GEGSPHAAKGWPVCMTRAFLTAAG 552
++GTRVDCLFGDEYFRG V+ + G RV FDDGD+R++ PPED+ +PL GCRVE +FE E+GYF G I DNGD TY V FDDGDVL+AAPR DIRVLS HEE + ++ NV + G+ H+E +EG ++ N + + A+ GE P P + F G
Sbjct: 10 RKGTRVDCLFGDEYFRGKVDDTDGGGSSYRVIFDDGDIREDAPPEDLEIPLEQGCRVECMFEGEDGYFDGVISTDNGDATYKVDFDDGDVLDAAPRHDIRVLS----WPHEESVPTNAVTAEDNYTNVTEQEGKALDTGYSNRSHNEAESEGNREAQKNDDNSKGISAAHGELPPREETHDPPHRPQRFSEVGG 199
BLAST of mRNA_D-dichotoma_M_contig921.19951.1 vs. uniprot
Match: A0A7S2G377_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G377_9STRA) HSP 1 Score: 112 bits (281), Expect = 8.130e-22 Identity = 153/630 (24.29%), Postives = 246/630 (39.05%), Query Frame = 1
Query: 703 VFLSGAENKLHGFIENLARRGSAMDNVPPDYRLLVVSYKIAIVEKKLMNLVRTGSAGINTPPALG--GDDRFAAETTDRCRAKASTGRSQPSFFISPTILPSTTLRASLCRIARHVSYLTRKKSVALVRLCYGDSSKQMAQALCDLASAYAEDGLWPQVAHHVARASNILAREVEDSAGGHNKYNTRSEANASASHIP----MIIDKPIAARLTFCSQPYTNPAMSELLGARRCARAILDIIL----ILRSLARVTGNKVRREEFQAQLSSHPDEELRVALQSISDTLVLP----------DLCEWWEALGCLRRSSRLFTDLTIKVLEGARWKEVGQVLLAFQDVDPK---GTGFADRQVISLVV---------LDDE---------------------AQEESKTSLSGRRLCLLTVRVQT---------------LMGRCKTHMGAFSAACNGLTGTLRYLESLHLGDNSISYVPVLTALASALVGSHRQQLEKTTGRAKRVADKWIKGKEGQRIWKEQECKRLQGECRRRLEVVSRAEVEARTWQALA---AHKVKSISRELAGQCRQMDQAEESMVRAWEIRESRYGRYHAQVASVLVGLGNLAVLRQQHKEAEDWFRRALETYE 2379
F+ +N H + LA + + P RL V+ Y+IA +E++ + G+A + P L GD A+A G S + + + R +++ALVRL G +S M QA+ DL+ +YA LWPQVA H+AR + +L + + + NAS P + P A T+P + +G+ +A +++L LR LA V E + L++ P L A I +P W + LR F ++ + +G R + + LAF V P G A+ + ++L + LD A ++K ++ + + Q+ L G+ +H G A L LR L +IS T +A V + + ++ RAK A+ W+ EG +W+ E KRL E + + ++R E+E R QAL A VK+ S A D+AEE ++R WEI ES +GR H A+ + LGNL V+ +A+ WF+ A+E ++
Sbjct: 130 AFMPTFDNPSHMTVTRLAANPAELATAEPQARLAVLHYQIAALEQQHWSREMCGTAWDSDEPRLHSPGDP-----------AQAGDGGSGTAIW--------------------EALFQMRMRAMALVRLNNGSNSLAMLQAVVDLSRSYASQALWPQVATHLARGTQLLKLAERE---------LKIDGNASRPAPPGGEGQAMPPPGA----------TDPHHQKWVGSPAELKATAEVMLGFFGELRGLASEFNGMVPWAELVSVLANSPHPLLADAPYGIRRGGAVPWSGLNQLDGQATMTWGGVMAFLRSQHAGFQEMAKSLEDGLRSDHLALIRLAFHAVQPTKNPACGVANPKALALALSRTPATARELDGAKIADSLFERMTTVSVHSPTTGAGSDAKIPVAWEEVLAIFATEQSDTAEWMSRLRSDLLLLEGQMMSHTGRLEEAERTL---LRTQHELAPRAETISACSCYTTIAEMYVQKYLRWRQQRGERAKESAEDWLASDEGHALWRS-EVKRLLSESKDQERRLTRLELEYRARQALLKAHADHVKATSD--ADVPDHFDKAEEYLLRIWEIHESAFGRNHVGTAASCLSLGNLCVINSDLAQAKQWFKSAIEIFD 703
BLAST of mRNA_D-dichotoma_M_contig921.19951.1 vs. uniprot
Match: A0A6H5J7A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7A2_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 3.960e-21 Identity = 48/88 (54.55%), Postives = 67/88 (76.14%), Query Frame = 1
Query: 2119 AEVEARTWQALAAHKVKSISRELAGQCRQMDQAEESMVRAWEIRESRYGRYHAQVASVLVGLGNLAVLRQQHKEAEDWFRRALETYEV 2382
+++E RTWQAL A++ K ++REL G+ +++D AE+ +VRAWEI ESR GR V + + LGNLAV+R++ EA DWFRRALET+EV
Sbjct: 19 SQIEERTWQALVAYRSKVLTRELGGKGKELDTAEDYLVRAWEILESRQGRNDPDVGAACISLGNLAVIRRRLNEAIDWFRRALETFEV 106 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig921.19951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig921.19951.1 >prot_D-dichotoma_M_contig921.19951.1 ID=prot_D-dichotoma_M_contig921.19951.1|Name=mRNA_D-dichotoma_M_contig921.19951.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=803bp MEEKEGTRVDCLFGDEYFRGTVEVSGDGLCRVNFDDGDVRDNVPPEDIAVback to top mRNA from alignment at D-dichotoma_M_contig921:74852..105991+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig921.19951.1 ID=mRNA_D-dichotoma_M_contig921.19951.1|Name=mRNA_D-dichotoma_M_contig921.19951.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=31140bp|location=Sequence derived from alignment at D-dichotoma_M_contig921:74852..105991+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig921:74852..105991+ >mRNA_D-dichotoma_M_contig921.19951.1 ID=mRNA_D-dichotoma_M_contig921.19951.1|Name=mRNA_D-dichotoma_M_contig921.19951.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=4818bp|location=Sequence derived from alignment at D-dichotoma_M_contig921:74852..105991+ (Dictyota dichotoma ODC1387m male)back to top |