mRNA_D-dichotoma_M_contig921.19947.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig921.19947.1
Unique NamemRNA_D-dichotoma_M_contig921.19947.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig921.19947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig921contigD-dichotoma_M_contig921:8854..11426 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score71.2
Seed ortholog evalue5.7e-10
Seed eggNOG ortholog2880.D8LS38
GOsGO:0000325,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0009705,GO:0015698,GO:0016020,GO:0031090,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0051179,GO:0051234,GO:0098588,GO:0098805
EggNOG free text desc.cellular response to phosphate starvation
EggNOG OGsCOG5036@1,KOG1161@2759,KOG2325@1,KOG2325@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size573
Cds size573
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig921.19947.1prot_D-dichotoma_M_contig921.19947.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig921 8854..11426 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931153.4942749-CDS-D-dichotoma_M_contig921:8853..89261622931153.4942749-CDS-D-dichotoma_M_contig921:8853..8926Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig921 8854..8926 +
1690799639.1585286-CDS-D-dichotoma_M_contig921:8853..89261690799639.1585286-CDS-D-dichotoma_M_contig921:8853..8926Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig921 8854..8926 +
1622931153.5378096-CDS-D-dichotoma_M_contig921:9502..96621622931153.5378096-CDS-D-dichotoma_M_contig921:9502..9662Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig921 9503..9662 +
1690799639.178367-CDS-D-dichotoma_M_contig921:9502..96621690799639.178367-CDS-D-dichotoma_M_contig921:9502..9662Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig921 9503..9662 +
1622931153.5556467-CDS-D-dichotoma_M_contig921:9869..100831622931153.5556467-CDS-D-dichotoma_M_contig921:9869..10083Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig921 9870..10083 +
1690799639.1945403-CDS-D-dichotoma_M_contig921:9869..100831690799639.1945403-CDS-D-dichotoma_M_contig921:9869..10083Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig921 9870..10083 +
1622931153.5784304-CDS-D-dichotoma_M_contig921:10766..108331622931153.5784304-CDS-D-dichotoma_M_contig921:10766..10833Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig921 10767..10833 +
1690799639.2107377-CDS-D-dichotoma_M_contig921:10766..108331690799639.2107377-CDS-D-dichotoma_M_contig921:10766..10833Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig921 10767..10833 +
1622931153.6021023-CDS-D-dichotoma_M_contig921:11367..114261622931153.6021023-CDS-D-dichotoma_M_contig921:11367..11426Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig921 11368..11426 +
1690799639.2223892-CDS-D-dichotoma_M_contig921:11367..114261690799639.2223892-CDS-D-dichotoma_M_contig921:11367..11426Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig921 11368..11426 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig921.19947.1

>prot_D-dichotoma_M_contig921.19947.1 ID=prot_D-dichotoma_M_contig921.19947.1|Name=mRNA_D-dichotoma_M_contig921.19947.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=191bp
MDVRGQYETLGNKVLHLTRYLHVNVGALEKLLAQHDEQVRQRQVPKFCPG
GQALAKFESMRDLCGHRKFLSLVDGLQTAIKSMEGNAGNAMDVGDSDGEL
DDFQMELDLKLAKPTVGDGVRRGIGGARVSPLSHSSSVRGVLEAIAEEQG
TLTAAEGHTVTNFLSLEVLPTPRMCTFEDEESPDHRTLELH
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mRNA from alignment at D-dichotoma_M_contig921:8854..11426+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig921.19947.1 ID=mRNA_D-dichotoma_M_contig921.19947.1|Name=mRNA_D-dichotoma_M_contig921.19947.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=2573bp|location=Sequence derived from alignment at D-dichotoma_M_contig921:8854..11426+ (Dictyota dichotoma ODC1387m male)
ATGGATGTACGGGGCCAGTACGAGACCCTGGGGAACAAGGTCCTGCATCT
CACCCGATATCTTCATGTAAACGGTGAGAAGACGTACGCTCGGTATGGTC
CAGTCGCTCACCAAATATGAACCTGCGTCGGTGGGGCGAACCGACCGAAA
ATCCCAGACTGGCAGGGGGGCGAATCGGTACAAGGGGCGTGATGATCAAT
CTCCCCGGTGTGTTGCGCGGATAGATAAAATGCCGACGATGGTTTCTGAG
TGCTCGCGAGTCATCAATGGTATAGCGGCAAAGCAGCACATGACCAGGGT
ACTGCCCACCTCCCAAGTCCGGTGGGGTCGGAGCCAAGGCTTTCCGAGAT
TAACGCATGTGATAACATCGTCCTTGTATCACGAGTGAGTCACACGGAGC
TCCGGCACCTGCTCTGAATACCCTGTCCACCACTCGTCAAAGGAAGGCGC
TTGGCACTGATTGGTGTTGCAGCTAGCCTATGATGTTGGAGGGATAGATA
CACGGGACTGGAGGTACAGATGGAAATGTGTCGGATGTCCATGTCCTTCC
AAACACCGCGTTCGCCTTGATCACTCATGGGCGCTCGAAAGCACGCCCAA
CTGACGTTCTCTCGGCACGCGCGTATCCGAATTTGACGTCAAACGTTAGT
GGGAGCTCTGGAGAAGTTGCTCGCCCAGCACGACGAGCAAGTCCGGCAGA
GACAAGTTCCCAAGTTTTGCCCCGGTGGCCAAGCGCTTGCCAAGTTCGAG
AGCATGAGGGATCTCTGTGGGCACAGGAAATTCCTGTCCCTTGTGGACGG
CCTTCAAACGTGAGGAACTAGAGTGCGCTGGACTCGGCTGCATCGTTCGG
GCACGGAAGCAGCACCGCCTCCTCGTGGGGCTCACGTTTGCCCCCTAGAG
GTTTGCAGCTGGTCTCTCATCGACGGCGAGAATCACCCGCTGCCCCACTG
ATCGATATGAGCTTGCAGTCCTTCCGACCCTTACGGCCGAGCTCTTGCCC
CTGATACCCTTGGCAGTGCCATCAAATCAATGGAAGGGAACGCAGGTAAT
GCTATGGACGTTGGAGATTCGGACGGCGAATTGGACGACTTCCAAATGGA
ACTGGATCTCAAGCTGGCCAAGCCGACCGTTGGAGATGGCGTCCGTCGAG
GGATTGGTGGCGCGCGAGTTTCTCCGCTTTCCCATTCGTCCAGCGTGCGC
GGAGTGCTTGAGGCGATCGCGGAGGAACAGGTTAGGTGTGACTCTCTTCG
AGCCTTCCTCCTGAGGGGCAATCTCTGGGCAGGTTGTTTTGGCTTGCGGT
CGGGGGGGATAAAGACCGTCACCGATTGACTTCCAGGAATCCTGAATCCC
ACGGGACGTTTTGCCGGCTTGGAGAGACTCCGGCAATTTGTTCATGGGAT
CCATGTTTGGAGGGGCCTGACATGAAGAGCGAGATGCCTACTCTTGTGGA
AGGTGCTGTGGCGTAAAGTAAGCGTAGACCACAAAGAACTCACTCGCATC
GTCCTCGTCCCTCTTTCCGTCTAATGCTCGAAGAGAAATTGGACGAAGCA
TCCGTCTCGTGTATATAGTATACGCCCGTACGATGTGTAGACATTCCCTA
CTGACAGCGAGTGACAAACCGTCCTCCCAATGATGTGTACTGTTGGAAAA
TGACCGGATAAGCCGCCTATATCCCGCGACAAGTCCAACCACCGGTCGAT
CGAAATCGGTGTGCTTACTCTCCATGAGGAACTGCCGAGAGTACCGAGGA
AGACATTTGCGTTCGGCAGAAATCTAGTTGCATCCACGTGTTGTATTCGC
ATCATAGTTGCCGATTCTGGCCCGCGCGAATCGTGGCCTAACCTCTCGGG
CCTGGGGTTATCTTGGATATCTCCCCAACGGCGGGTCTTGCGACGTGTCA
CCTCGTTTGGCAGGGAACACTTACTGCTGCCGAGGGCCATACGGTGACAA
ACTTCCTCAGCCTGGAGGTGCTTCCTACACGTGAGTGCTCGCGTGAACCA
TTCCTCCAACCAAGCTAGGAACCCAGTGGAAGTCGTCCAATCGATCGTCG
ACTATGAGCTTTGGCTCCTCGATTACTCTCTTTCGAGGCACGAAACGATT
CGTGCTGACATTAAAAAAAAATGTCCCACAAGCTACTGAGGCCTATGTTG
GGTGGCAGTGCTTCCACCGTCGAGTCAGCATGCGGACGACTTGTTTTTAT
CCCGATTCCGGGAGATCGAACCCTGCGCCATCGCCTTTTGCGCGAAATCG
GGATTGGCACTTCTTCGGCAATAGAATGCCCCGAATGCCTCGTATAAGAG
AAGAGACCAGGAGCAGGAGGCGAGTCAGAGTGAATGAAGCACACGGCGAG
CGTGACATACCCTTCGACCGTAACGATTATGTTGTACCCATTCCGGGAAT
AGGACACATGTGGGCTAGCAACGTGCAAAAGCTTTCAACCTACCGTTCGA
GCCCGATACCTTCGACCATCCCCGCCTACGACCCTCGTGGGGAATTGTTG
TACCCGGGAAACAGCGCGGATGTGCACCTTTGAAGACGAGGAGTCTCCCG
ACCACCGAACCCTGGAGCTCCAC
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig921:8854..11426+

>mRNA_D-dichotoma_M_contig921.19947.1 ID=mRNA_D-dichotoma_M_contig921.19947.1|Name=mRNA_D-dichotoma_M_contig921.19947.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1146bp|location=Sequence derived from alignment at D-dichotoma_M_contig921:8854..11426+ (Dictyota dichotoma ODC1387m male)
ATGGATGTACGGGGCCAGTACGAGACCCTGGGGAACAAGGTCCTGCATCT
CACCCGATATCTTCATGTAAACGATGGATGTACGGGGCCAGTACGAGACC
CTGGGGAACAAGGTCCTGCATCTCACCCGATATCTTCATGTAAACGTGGG
AGCTCTGGAGAAGTTGCTCGCCCAGCACGACGAGCAAGTCCGGCAGAGAC
AAGTTCCCAAGTTTTGCCCCGGTGGCCAAGCGCTTGCCAAGTTCGAGAGC
ATGAGGGATCTCTGTGGGCACAGGAAATTCCTGTCCCTTGTGGACGGCCT
TCAAACTGGGAGCTCTGGAGAAGTTGCTCGCCCAGCACGACGAGCAAGTC
CGGCAGAGACAAGTTCCCAAGTTTTGCCCCGGTGGCCAAGCGCTTGCCAA
GTTCGAGAGCATGAGGGATCTCTGTGGGCACAGGAAATTCCTGTCCCTTG
TGGACGGCCTTCAAACTGCCATCAAATCAATGGAAGGGAACGCAGGTAAT
GCTATGGACGTTGGAGATTCGGACGGCGAATTGGACGACTTCCAAATGGA
ACTGGATCTCAAGCTGGCCAAGCCGACCGTTGGAGATGGCGTCCGTCGAG
GGATTGGTGGCGCGCGAGTTTCTCCGCTTTCCCATTCGTCCAGCGTGCGC
GGAGTGCTTGAGGCGATCGCGGAGGAACAGTGCCATCAAATCAATGGAAG
GGAACGCAGGTAATGCTATGGACGTTGGAGATTCGGACGGCGAATTGGAC
GACTTCCAAATGGAACTGGATCTCAAGCTGGCCAAGCCGACCGTTGGAGA
TGGCGTCCGTCGAGGGATTGGTGGCGCGCGAGTTTCTCCGCTTTCCCATT
CGTCCAGCGTGCGCGGAGTGCTTGAGGCGATCGCGGAGGAACAGGGAACA
CTTACTGCTGCCGAGGGCCATACGGTGACAAACTTCCTCAGCCTGGAGGT
GCTTCCTACACGGAACACTTACTGCTGCCGAGGGCCATACGGTGACAAAC
TTCCTCAGCCTGGAGGTGCTTCCTACACCGCGGATGTGCACCTTTGAAGA
CGAGGAGTCTCCCGACCACCGAACCCTGGAGCTCCACCGCGGATGTGCAC
CTTTGAAGACGAGGAGTCTCCCGACCACCGAACCCTGGAGCTCCAC
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