mRNA_D-dichotoma_M_contig92.19929.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig92.19929.1
Unique NamemRNA_D-dichotoma_M_contig92.19929.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Match: D8LRH6_ECTSI (Ornithine cyclodeaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH6_ECTSI)

HSP 1 Score: 524 bits (1349), Expect = 4.210e-180
Identity = 277/373 (74.26%), Postives = 303/373 (81.23%), Query Frame = 3
Query:  114 MQSVLRLSARRASAVAASAITKSRNAEVTT---------IPSTVARAFATVPGPRLFDYETVKSSLKESDAVEAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIFQENRYLTDLRTGAAGAVCVKHFVARHHKKVSFIGAGVIAKAMARASACVHEFDEAFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQTPGSHPVLELDWLRPHATIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCSRVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPGREGEELILVDLTGTGAQDAAIGQVAWDILSK 1205
            M S LR+SARRA+A A SA  K     V +         I  T  RAFATVPGPRLFDY+TV S LK+SDAVEA+E+AFGML+KGKVDVPIPMHIGI+ES+KAGPGDCHIKGGYI GT+TWTVKLANVSFYKN+EKGL  GSGIFVVCDATNGAPLAIFQENR+LTDLRTGAAGAV VKHF ARHHKKV F+GAGVIA AMAR S CVHEFDE FA+GLD+ +T+ +A+E+EAELGYKV                          +ELDWLRPHATIIASGSDQPTKNEIP +VQKASKMVCDLVRQC +VGELRSAIKAGVMT DDV+AEIGDVV G+KPGR GEELILVDLTGTGAQDAAIGQVAWDILSK
Sbjct:    1 MLSSLRISARRAAAAAPSAGNKLHKGVVASSSAGSSGSIIEQTACRAFATVPGPRLFDYDTVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESEKAGPGDCHIKGGYISGTSTWTVKLANVSFYKNVEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVVKTKEWADEIEAELGYKV--------------------------VELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGDVVNGDKPGRTGEELILVDLTGTGAQDAAIGQVAWDILSK 347          
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Match: A0A7S2RSZ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSZ5_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 1.090e-175
Identity = 250/329 (75.99%), Postives = 294/329 (89.36%), Query Frame = 3
Query:  222 RAFATVPGPRLFDYETVKSSLKESDAVEAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIFQENRYLTDLRTGAAGAVCVKHFVARHHKKVSFIGAGVIAKAMARASACVHEFDEAFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQTPGSHPVLELDWLRPHATIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCSRVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPGREGEELILVDLTGTGAQDAAIGQVAWDILSKK 1208
            R  A++P PRLFDYET+++++KE+DAV ++E+AFGML+KGKVDVPIPMHIGI+E++ AGPGDCHIKGGYI GTTTWTVK ANVSFYKN+EKGL PGSGIF+VCDATNGAPLAI QENRYLTDLRTGAAGA+ VKHF +  HKKV+FIG GVIA+AMARA+  +H+FD+ FAFGLD      FA+ + ++LGY V  CATAEEAVRS+DVIFTQT G++ VL+LDWL+PHATIIASGSDQPTKNEIP +VQ+ SK+VCDLVRQCSRVGELRSAI AGVM+EDDV+AEIG+VV G KPGREG+ELILVDLTGTGAQDAAIGQVAW++LS+K
Sbjct:   70 RGVASLPPPRLFDYETIRANVKEADAVSSVEAAFGMLAKGKVDVPIPMHIGIDETETAGPGDCHIKGGYISGTTTWTVKCANVSFYKNVEKGLPPGSGIFIVCDATNGAPLAIMQENRYLTDLRTGAAGAISVKHFASPKHKKVAFIGTGVIAQAMARATNTLHQFDQGFAFGLDDGMNAQFADTIHSQLGYPVQVCATAEEAVRSADVIFTQTTGANHVLQLDWLQPHATIIASGSDQPTKNEIPPEVQRQSKLVCDLVRQCSRVGELRSAIAAGVMSEDDVYAEIGEVVNGTKPGREGDELILVDLTGTGAQDAAIGQVAWEVLSQK 398          
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Match: A0A6T5N8F9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N8F9_HETAK)

HSP 1 Score: 496 bits (1277), Expect = 3.930e-169
Identity = 245/335 (73.13%), Postives = 280/335 (83.58%), Query Frame = 3
Query:  207 PSTVARAFATVPGPRLFDYETVKSSLKESDAVEAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIFQENRYLTDLRTGAAGAVCVKHFVAR-HHKKVSFIGAGVIAKAMARASACVHEFDEAFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQTPGSHPVLELDWLRPHATIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCSRVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPGREGEELILVDLTGTGAQDAAIGQVAWDILSKK 1208
            P  VARAFA+VP PRLFDY+TV+S+LK SDA+ A+E AFG L+KG+VDVPIPMHIGI E++ AGPGDCHIKGGY+ G TTWTVKLANVSFYKNLEKGL+PGSGIF+VCDATNGAPL IFQENRYLTDLRTGAAGA+ VK+F A   HK +SFIG G IA++MA+ +ACVH F++ F +GLD    + FA E+EA  GY V  C TAEEAVRS DV+FTQT GS  VLE DWLRPHATIIASGSDQPTK EIP DV   +KMVCDL  QC+R GELRSA+K G MTE DVHAE+G+VV G K GREG+EL+LVDLTGTGAQDAAIGQVAW+ILS+K
Sbjct:   19 PVVVARAFASVPPPRLFDYQTVRSTLKPSDAISAVEEAFGKLAKGEVDVPIPMHIGIHETETAGPGDCHIKGGYVLGATTWTVKLANVSFYKNLEKGLSPGSGIFIVCDATNGAPLGIFQENRYLTDLRTGAAGALSVKYFGASPKHKNISFIGTGAIAESMAKGTACVHNFEQGFCYGLDRAMNERFAAEIEATCGYPVKVCDTAEEAVRSGDVVFTQTVGSSVVLEGDWLRPHATIIASGSDQPTKQEIPVDVMARAKMVCDLTAQCARFGELRSALKEGAMTEADVHAELGEVVNGTKAGREGDELVLVDLTGTGAQDAAIGQVAWEILSQK 353          
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Match: A0A7S0H4T2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H4T2_9EUKA)

HSP 1 Score: 491 bits (1263), Expect = 4.790e-167
Identity = 251/340 (73.82%), Postives = 284/340 (83.53%), Query Frame = 3
Query:  183 RNAEVTTIPSTVAR-AFATVPGPRLFDYETVKSSLKESDAVEAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIFQENRYLTDLRTGAAGAVCVKHFVARHHKKVSFIGAGVIAKAMARASACVHEFDEAFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQTPGSHPVLELDWLRPHATIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCSRVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPGREGEELILVDLTGTGAQDAAIGQVAWDIL 1199
            R A     PS VAR   ATV  P+LF YE +K+ +KE DA+ ++E+AFGML+KGKVDVPIPMHIGIEES +AGPGDCHIKGGYI+GT TWTVKLANVSFYKNL+KGL PGSGIFVV DATNG PLAIFQENRYLTDLRTGAAGAV VKHF A+ H KV F+G G+IA AMARAS+ VH + EA  FGLD  QTQ F +E+EAEL +    C +AEEAV SSDVIFTQTP +  VLEL WL+PHATIIASGSDQ TKNEIP +V KASKMVCDLVRQCS+VGELRSA++AGVM E DV+AEIG+VV G KPGREG+ELI+VDLTGTGAQDAAIGQVAW++L
Sbjct:    8 RIARTIATPSAVARRGLATVNPPKLFSYEEIKTGVKEKDAISSVEAAFGMLAKGKVDVPIPMHIGIEESPEAGPGDCHIKGGYIYGTKTWTVKLANVSFYKNLDKGLPPGSGIFVVIDATNGFPLAIFQENRYLTDLRTGAAGAVSVKHFAAKDHTKVCFLGTGMIAGAMARASSEVHGWTEANCFGLDEAQTQRFCDEMEAELKFPFKVCKSAEEAVGSSDVIFTQTPAAQTVLELGWLKPHATIIASGSDQSTKNEIPVEVMKASKMVCDLVRQCSKVGELRSALEAGVMKETDVYAEIGEVVNGTKPGREGDELIVVDLTGTGAQDAAIGQVAWNVL 347          
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Match: A0A7R9UBH1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBH1_9STRA)

HSP 1 Score: 483 bits (1243), Expect = 6.960e-164
Identity = 238/329 (72.34%), Postives = 277/329 (84.19%), Query Frame = 3
Query:  222 RAFATVPGPRLFDYETVKSSLKESDAVEAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIFQENRYLTDLRTGAAGAVCVKHFVARHHKKVSFIGAGVIAKAMARASACVHEFDEAFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQTPGSHPVLELDWLRPHATIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCSRVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPGREGEELILVDLTGTGAQDAAIGQVAWDILSKK 1208
            RA AT+P P+LFDY T+ S+LK S A+EA+E+AFG L+KG+VDVPIPMHIGI+ES  AGPGDCHIKGGYIFGTTTWTVKLANVSFYKN++KGL PGSG+F+VCDATNGAPL IFQENRY+TDLRTGAAGAV VKH V R   KV F+G GVI  AMA A A VH+F     FGLD+ Q++AFA+++  ELGY +  C T E+A+  +DV+FT TP + PVLEL  L+P ATIIASGSDQPTK EIP +VQKAS+MVCDLVRQCSRVGELRSAI+AGVMTEDDVHAE+G++V G KPGR G+ELILVDLTGTGAQDAAIGQVAW++L  K
Sbjct:   32 RAMATLPPPQLFDYATITSNLKVSQAIEAVEAAFGALAKGEVDVPIPMHIGIDESAAAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNVDKGLPPGSGVFIVCDATNGAPLGIFQENRYMTDLRTGAAGAVAVKHCVNRDADKVCFVGGGVINLAMATACASVHDFRSGTVFGLDMAQSEAFAKQITDELGYPMTVCDTVEDALADADVVFTATPAAAPVLELGMLKPSATIIASGSDQPTKQEIPVEVQKASRMVCDLVRQCSRVGELRSAIEAGVMTEDDVHAELGEIVNGTKPGRVGDELILVDLTGTGAQDAAIGQVAWEVLGSK 360          
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Match: A0A7S2XZG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZG6_9STRA)

HSP 1 Score: 478 bits (1229), Expect = 2.090e-162
Identity = 229/297 (77.10%), Postives = 265/297 (89.23%), Query Frame = 3
Query:  222 RAFATVPGPRLFDYETVKSSLKESDAVEAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIFQENRYLTDLRTGAAGAVCVKHFVARHHKKVSFIGAGVIAKAMARASACVHEFDEAFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQTPGSHPVLELDWLRPHATIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCSRVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPG 1112
            R  + VP P LFDYET+K++LKE+DA+E++E+AFGMLS+GKVDVPIPMHIGI+ESD AGPGDCHIKGGY++GTTTWTVKLANVSFYKNLEKGL PGSG+F+VC+A NGAPL IFQENRYLTDLRTGAAGA+ VK+FVA+ H KV+FIGAGVIA+AMARAS+CVH+F E FA+GLD  QT+ F  E+ +ELG+    C TAEEAVRS+DVIFTQT G+ PVL+LDWL+PHATIIASGSDQPTKNEIP+DV K SKM+CDLVRQCS+VGELR+AIK GVMTEDDV AEIGDVVLG KPG
Sbjct:   23 RCLSGVPPPLLFDYETIKANLKEADAIESVEAAFGMLSQGKVDVPIPMHIGIDESDAAGPGDCHIKGGYVYGTTTWTVKLANVSFYKNLEKGLPPGSGVFIVCNAVNGAPLGIFQENRYLTDLRTGAAGAISVKNFVAKEHTKVAFIGAGVIAQAMARASSCVHKFTEGFAYGLDTAQTEGFVSEMSSELGFPFKVCETAEEAVRSADVIFTQTTGAAPVLQLDWLKPHATIIASGSDQPTKNEIPSDVMKKSKMICDLVRQCSKVGELRTAIKEGVMTEDDVFAEIGDVVLGNKPG 319          
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Match: C1MMA0_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MMA0_MICPC)

HSP 1 Score: 415 bits (1066), Expect = 1.970e-137
Identity = 208/320 (65.00%), Postives = 257/320 (80.31%), Query Frame = 3
Query:  237 VPGPRLFDYETVKSSLKESDA-VEAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIFQENRYLTDLRTGAAGAVCVKHFVARHHKKVSFIGAGVIAKAMARASACVHEFDEAFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQTPGSHPVLELDWLRPHATIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCSRVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPGREGEELILVDLTGTGAQDAAIGQVAWD 1193
            +P P L+DY+T+ +++K + A VEA+E+AF  L+KGKVDVP+PMHIGI E+  AGPGDCHIKGGYI G  TWTVKLA VSFYKN+EKGL  GSG+FVVCDATNG P A+  ENRYLTD+RTGAAGAVCVKH +A   K V+FIG GVIA+AMA+A+A VH F+EAFA+    +++ +F +++  ELGY  +ACATAE+AVR++DV+FTQTPG   VLE  WLRPHATIIASGSDQPTKNEIP ++   +K+V D+  QCSRVGELRSAI+AG+MTE +VHAEIG ++ GE+ GR G E I+ DLTGTGAQDAAIG    +
Sbjct:   26 LPAPVLYDYDTIVNNVKPARALVEAVEAAFAELAKGKVDVPLPMHIGIAETAAAGPGDCHIKGGYIEGAPTWTVKLACVSFYKNVEKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDMRTGAAGAVCVKH-LAPDAKSVAFIGTGVIAEAMAKATATVHGFEEAFAYARSPQKSSSFCKKMTKELGYPFYACATAEDAVRNADVVFTQTPGGEWVLEEQWLRPHATIIASGSDQPTKNEIPPEILMNAKVVTDITAQCSRVGELRSAIEAGLMTEANVHAEIGQIISGEREGRVGNERIVCDLTGTGAQDAAIGSYVME 344          
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Match: C1MM99_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MM99_MICPC)

HSP 1 Score: 415 bits (1066), Expect = 1.970e-137
Identity = 198/322 (61.49%), Postives = 256/322 (79.50%), Query Frame = 3
Query:  237 VPGPRLFDYETVKSSLKES-DAVEAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIFQENRYLTDLRTGAAGAVCVKHFVARHHKKVSFIGAGVIAKAMARASACVHEFDEAFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQTPGSHPVLELDWLRPHATIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCSRVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPGREGEELILVDLTGTGAQDAAIGQVAWDIL 1199
            +P P+L+DY+T+ S +K + +  E++E+AF  L+KGKVDVP+PMHIGI E+  AGPGDCHIKGGYI G  TWTVKLA VSFYKN+EKGL  GSG+FVVCDATNG P A+  ENRYLTD+RTGAAGAVCVKH   +  K V+FIG GVIA++MAR++A V+ F++ + +  ++ +  AF ++++ ELGY   AC +AEEAVR++DV+FTQTPG   VL+L WL+PHATIIASGSDQPTKNEIP +V K +K++ D+  QC RVGE+RSA+ AGVM E DVHAE+G+++ G K GR+G+ELI+ DLTGTGAQDAAIG    ++L
Sbjct:   22 LPAPKLYDYDTIVSKVKPNKELTESVEAAFAELAKGKVDVPLPMHIGIAETAAAGPGDCHIKGGYIEGAPTWTVKLACVSFYKNVEKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDMRTGAAGAVCVKHLAVKGAKSVAFIGTGVIAESMARSTATVYGFEQGYGYSRNIDKATAFCDKMQKELGYDFKACDSAEEAVRNADVVFTQTPGGEWVLDLAWLKPHATIIASGSDQPTKNEIPPEVMKKAKVITDITAQCVRVGEVRSAVAAGVMKESDVHAELGEIINGSKKGRQGKELIVCDLTGTGAQDAAIGSYVMNVL 343          
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Match: A0A7S0GND7_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GND7_MICPS)

HSP 1 Score: 415 bits (1067), Expect = 5.190e-137
Identity = 203/323 (62.85%), Postives = 255/323 (78.95%), Query Frame = 3
Query:  237 VPGPRLFDYETVKSSLKESDAV-EAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIFQENRYLTDLRTGAAGAVCVKHFVARHHKKVSFIGAGVIAKAMARASACVHEFDEAFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQTPGSHPVLELDWLRPHATIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCSRVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPGREGEELILVDLTGTGAQDAAIGQVAWDILS 1202
            +P P+L+DY+T+K+ +  S A+ EA+E AF  L+ GKVDVP+PMHIG+ E+  AGPGDCHIKGGYI G  TWTVKLANVSFYKN+EKGL  GSG+FVVCDA NG P AI  ENRYLTDLRTGAAGAV VKH  A+  K V+FIG GVIA+AMARA+A V +F+EAFA+    K++  F +++  ELG+  +ACATAE+AVR++DV+FTQTPG   VLE +WLRPHA ++ SGSDQPTKNEIP  +   +K+V D+  QC+RVGE+RSAI+AGVMT +DVHAE+G +V G+  GR+G+ELI+ DLTGTGAQDAAIG    + L+
Sbjct:   35 LPAPKLYDYDTIKAKVAPSKALTEAVEDAFAQLANGKVDVPMPMHIGVAETAAAGPGDCHIKGGYIEGAPTWTVKLANVSFYKNVEKGLPAGSGVFVVCDAANGGPKAILHENRYLTDLRTGAAGAVAVKHLAAKRAKSVAFIGTGVIAEAMARATATVFDFEEAFAYSPSPKKSSTFCKKMSEELGFPHYACATAEDAVRAADVVFTQTPGGEWVLEEEWLRPHALVVCSGSDQPTKNEIPPAILAGAKVVTDITAQCARVGEVRSAIEAGVMTAEDVHAELGQIVSGKVKGRKGKELIVCDLTGTGAQDAAIGSHVMEALA 357          
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Match: A0A7S4QLX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QLX7_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 8.200e-135
Identity = 220/365 (60.27%), Postives = 267/365 (73.15%), Query Frame = 3
Query:  120 SVLRLSARRASAVAASAITKSRNAEVTTIPSTVA-RAFATVPGPRLFDYETVKSSLKESDAVEAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCHIKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIFQENRYLTDLRTGAAGAVCVKHFVARHHKKVSFIGAGVIAKAMARASACVHEFDE-AFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQTPGSHPVLELDWLRPHA-TIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCSRVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPGREGEELILVDLTGTGAQDAAIGQVAWDILSK 1205
            S+LR  ARR        +  S      T+P T   RA +  P PRLFDYETV ++L  SDA++++E AF  L++G VDVP+PMHIGIEE+  AGPGDCHIKGGYI  T T+TVKLA VSFYKN+E+GL PGSGIF+V +A  GAPL +FQENR++TDLRTGAAGAV +KH      + V FIG G IA+ MARA+A V  F   A+AF       + FA+E+EAELG      ATA+E  + SD+IFTQTPG+  VLE DWL P   TIIASGSDQPTK EIP DV KASK + DL +Q S+VGELR  I+AGVMT DDV+AE+G++V G+KPGREG+E+I+VDLTGTGAQDAAIGQVAWD LS+
Sbjct:    4 SILRQGARR--------VASSSTTAAATLPRTTPMRALSGFPAPRLFDYETVTANLSVSDAIDSVEEAFSALARGNVDVPMPMHIGIEETAAAGPGDCHIKGGYISSTPTFTVKLACVSFYKNIERGLPPGSGIFIVVNAVTGAPLGVFQENRFMTDLRTGAAGAVAMKHCTTVDQEVVGFIGCGAIARNMARAAAAVRPFKGVAYAFA----GAEEFAKEMEAELGMPFEVTATAKELCQMSDIIFTQTPGAETVLEKDWLNPKGVTIIASGSDQPTKQEIPNDVLKASKYISDLTKQTSKVGELRGPIQAGVMTVDDVYAELGEIVNGDKPGREGDEIIVVDLTGTGAQDAAIGQVAWDKLSQ 356          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig92.19929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRH6_ECTSI4.210e-18074.26Ornithine cyclodeaminase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2RSZ5_9STRA1.090e-17575.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6T5N8F9_HETAK3.930e-16973.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0H4T2_9EUKA4.790e-16773.82Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7R9UBH1_9STRA6.960e-16472.34Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XZG6_9STRA2.090e-16277.10Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
C1MMA0_MICPC1.970e-13765.00Predicted protein (Fragment) n=1 Tax=Micromonas pu... [more]
C1MM99_MICPC1.970e-13761.49Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A7S0GND7_MICPS5.190e-13762.85Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
A0A7S4QLX7_9STRA8.200e-13560.27Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig92contigD-dichotoma_M_contig92:149792..152381 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score494.2
Seed ortholog evalue5.3e-137
Seed eggNOG ortholog227086.JGI_V11_49337
KEGG rclassRC00354
KEGG koko:K01750
KEGG ReactionR00671
KEGG Pathwayko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230
EggNOG free text desc.thiomorpholine-carboxylate dehydrogenase activity
EggNOG OGsCOG2423@1,KOG3007@2759
EC4.3.1.12
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionOrnithine cyclodeaminase
Ec32 orthologEc-18_004550.1
Exons2
Model size1999
Cds size1098
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig92.19929.1prot_D-dichotoma_M_contig92.19929.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig92 150580..152268 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931149.615913-UTR-D-dichotoma_M_contig92:149791..1505791622931149.615913-UTR-D-dichotoma_M_contig92:149791..150579Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig92 149792..150579 -
1690799636.8102689-UTR-D-dichotoma_M_contig92:149791..1505791690799636.8102689-UTR-D-dichotoma_M_contig92:149791..150579Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig92 149792..150579 -
1622931149.6619248-UTR-D-dichotoma_M_contig92:152268..1523811622931149.6619248-UTR-D-dichotoma_M_contig92:152268..152381Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig92 152269..152381 -
1690799636.8386261-UTR-D-dichotoma_M_contig92:152268..1523811690799636.8386261-UTR-D-dichotoma_M_contig92:152268..152381Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig92 152269..152381 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931149.631674-CDS-D-dichotoma_M_contig92:150579..1512961622931149.631674-CDS-D-dichotoma_M_contig92:150579..151296Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig92 150580..151296 -
1690799636.8210118-CDS-D-dichotoma_M_contig92:150579..1512961690799636.8210118-CDS-D-dichotoma_M_contig92:150579..151296Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig92 150580..151296 -
1622931149.6475523-CDS-D-dichotoma_M_contig92:151887..1522681622931149.6475523-CDS-D-dichotoma_M_contig92:151887..152268Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig92 151888..152268 -
1690799636.8300166-CDS-D-dichotoma_M_contig92:151887..1522681690799636.8300166-CDS-D-dichotoma_M_contig92:151887..152268Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig92 151888..152268 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig92.19929.1

>prot_D-dichotoma_M_contig92.19929.1 ID=prot_D-dichotoma_M_contig92.19929.1|Name=mRNA_D-dichotoma_M_contig92.19929.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=366bp
MQSVLRLSARRASAVAASAITKSRNAEVTTIPSTVARAFATVPGPRLFDY
ETVKSSLKESDAVEAIESAFGMLSKGKVDVPIPMHIGIEESDKAGPGDCH
IKGGYIFGTTTWTVKLANVSFYKNLEKGLAPGSGIFVVCDATNGAPLAIF
QENRYLTDLRTGAAGAVCVKHFVARHHKKVSFIGAGVIAKAMARASACVH
EFDEAFAFGLDLKQTQAFAEELEAELGYKVHACATAEEAVRSSDVIFTQT
PGSHPVLELDWLRPHATIIASGSDQPTKNEIPTDVQKASKMVCDLVRQCS
RVGELRSAIKAGVMTEDDVHAEIGDVVLGEKPGREGEELILVDLTGTGAQ
DAAIGQVAWDILSKK*
back to top

mRNA from alignment at D-dichotoma_M_contig92:149792..152381-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig92.19929.1 ID=mRNA_D-dichotoma_M_contig92.19929.1|Name=mRNA_D-dichotoma_M_contig92.19929.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=2590bp|location=Sequence derived from alignment at D-dichotoma_M_contig92:149792..152381- (Dictyota dichotoma ODC1387m male)
TGAACATTTGTCCAGAAAAATACGTTCGCGACTACCTTCAGAGTCACCAC TGATCCTTACTCAGTAGCTCAACATCGATCTCCTGTCTTGTCTATACTTT CTTTGCGAGCAGTATGCAATCGGTTCTCAGACTCTCCGCAAGACGTGCTT CCGCCGTCGCAGCATCAGCCATAACAAAATCCCGCAACGCCGAAGTGACG ACCATCCCAAGTACAGTCGCGCGAGCATTCGCTACCGTGCCAGGGCCTCG CCTGTTTGACTATGAGACAGTAAAATCATCTCTAAAGGAGTCGGATGCAG TGGAGGCTATTGAATCCGCGTTCGGGATGCTATCGAAGGGCAAGGTTGAC GTACCGATCCCTATGCACATCGGGATCGAGGAGTCGGACAAGGCTGGCCC AGGAGATTGCCACATCAAAGGCGGATACATTTTCGGTACCACCACTTGGA CAGTGAAGCTCGCGAACGTTTCTTTCTACAAGAACCTCGAAAAGGTGTGT CCGTCTCATCTTGAGAGCTTTCTCGATTTCAAAGTGGCTCGATGAACACG TTTAACTCGGGCAGTTCTTGACATGCAATCTGATGCAATCCTTAATTCGC CCGCCGTGCGTACGCATGATCTTGGCTGCCATGATCGTTTACGCGAACCT CCCGCCCAAGATCAAGAGTAGCTGAAGTCAGAGTCAGTGAATTGTGTGCA GAGTTAGCTAGCCTAACCGGATCATGTAGGACGTGGAGGTAGGTTTGCGT CTTTCATTTCCCTTCTTTCTCGGATTCGTGAGTTACTAAAGTTTCAAACA TGAACACGATTGTCCAGTTGAATTGGAACGGCTCTTCGATGTTCTCACTG GTGTGCTGCAGAACGTCGGAAAACAGTGCATTTGCATGCTGTTGTGTAAA ATACTAATACTACTGTATATGGCTTCAAGTGTGCATTGTGTGAGGTTTCA TGCGGAAGGAGCAATCGCTAGACATCTGATGTTAGCAAAACCCCGAGTGC TCAACTTCATCTTGCTTGACCGATGGATAAGTCCGGTTAAAATGTTAACT TGCAGCAACCGTTCGCTCCTAAACATGCTCTCTAGGGCCTGGCACCAGGA TCAGGGATATTTGTCGTCTGTGATGCAACGAATGGAGCGCCCTTGGCTAT CTTCCAGGAAAACCGTTACCTAACTGATTTACGCACGGGAGCCGCCGGTG CCGTGTGCGTGAAGCACTTTGTCGCTCGTCATCACAAGAAAGTGAGCTTC ATCGGGGCAGGCGTAATTGCGAAGGCGATGGCCCGAGCCTCCGCGTGCGT GCACGAGTTCGACGAAGCCTTCGCGTTCGGCCTGGACCTCAAGCAGACCC AAGCCTTCGCAGAGGAGCTCGAAGCCGAGCTTGGCTACAAGGTGCATGCG TGCGCCACGGCCGAGGAGGCTGTGCGCTCTTCCGACGTTATCTTCACCCA GACACCCGGCAGCCACCCGGTCCTGGAGCTGGACTGGCTCCGACCCCACG CAACGATCATCGCGAGTGGATCGGACCAGCCAACGAAGAACGAGATCCCT ACCGACGTGCAGAAGGCCAGCAAGATGGTATGCGACCTGGTTCGACAGTG CAGTCGAGTTGGCGAGCTTCGCAGCGCCATCAAGGCTGGTGTAATGACCG AAGACGATGTCCACGCCGAGATCGGCGATGTGGTTCTCGGCGAGAAGCCA GGTCGGGAGGGAGAGGAGTTGATCCTCGTCGACCTTACGGGGACTGGTGC TCAGGACGCGGCAATTGGCCAAGTGGCGTGGGATATCCTCTCGAAGAAGT AGCGGGTTACCGGTGCTTGAGACCACATCCCGATTGGGGACGAAATGGCG TGGACTGATCCTCGTCCACAATATCGCGGGAGTTGCTTCACACGTGCTGT AGTAGAGCGTGGAATAACATAGGCGTTGTAGCAGTTTTTGAACACGAGGC ACTGTACGAAGTGTCGAATGCCTGTGACTCGCGTTGCTTGAGACGACCAT GCTCTCGATAGGGAATATCCGTAGCCCGCGAGTTCGACGCAAGCGTTAAG CGTTTCTCTTGTTGCTCCATGCATGGTCGCACGTGATATTGGCGGCAAAG CGGTGGGTGGCATCGTTTCTGTTATGTCAAACGAGGTAGAAGACACGGCA GGGATAGTAATCGATAAGTACTGTAGTAGTTAGACACGTGGGCTCGAGAG ATCCGGCTGTGTCGCTCTACTGTAGCATATTTTATACGTTTGTGCCGGTG TGGTGTGCCGGTGTGGTGTGTGTGTGAATGAACGACGTTCTAATGCTATT GGCCTCGATCACCATCGATCCAGCGGTTGTCAATGCTCCTGGCTCCCATG CCGGCTGGTTACCGTAGACTTGACCACACACCCATGTGTCAGAGATACTG GAGACCCACCATGTACGAGGAGAGAAAGGAGAGACAATGAATGCTCCCCG CACATGTGAAGCTCAGACCTGTGTAGATTAGAGCTAGCTAATGTAGCTGG AGTATGCAATGATATGATATGATATGATATTATATGATATAGTAGCTACT AGCAACGACAGTGATTGGCACCTCAAACATGAAGCTTCCG
back to top

Coding sequence (CDS) from alignment at D-dichotoma_M_contig92:149792..152381-

>mRNA_D-dichotoma_M_contig92.19929.1 ID=mRNA_D-dichotoma_M_contig92.19929.1|Name=mRNA_D-dichotoma_M_contig92.19929.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=2196bp|location=Sequence derived from alignment at D-dichotoma_M_contig92:149792..152381- (Dictyota dichotoma ODC1387m male)
ATGCAATCGGTTCTCAGACTCTCCGCAAGACGTGCTTCCGCCGTCGCAGC
ATCAGCCATAACAAAATCCCGCAACGCCGAAGTGACGACCATCCCAAGTA
CAGTCGCGCGAGCATTCGCTACCGTGCCAGGGCCTCGCCTGTTTGACTAT
GAGACAGTAAAATCATCTCTAAAGGAGTCGGATGCAGTGGAGGCTATTGA
ATCCGCGTTCGGGATGCTATCGAAGGGCAAGGTTGACGTACCGATCCCTA
TGCACATCGGGATCGAGGAGTCGGACAAGGCTGGCCCAGGAGATTGCCAC
ATCAAAGGCGGATACATTTTCGGTACCACCACTTGGACAGTGAAGCTCGC
GAACGTTTCTTTCTACAAGAACCTCGAAAAGATGCAATCGGTTCTCAGAC
TCTCCGCAAGACGTGCTTCCGCCGTCGCAGCATCAGCCATAACAAAATCC
CGCAACGCCGAAGTGACGACCATCCCAAGTACAGTCGCGCGAGCATTCGC
TACCGTGCCAGGGCCTCGCCTGTTTGACTATGAGACAGTAAAATCATCTC
TAAAGGAGTCGGATGCAGTGGAGGCTATTGAATCCGCGTTCGGGATGCTA
TCGAAGGGCAAGGTTGACGTACCGATCCCTATGCACATCGGGATCGAGGA
GTCGGACAAGGCTGGCCCAGGAGATTGCCACATCAAAGGCGGATACATTT
TCGGTACCACCACTTGGACAGTGAAGCTCGCGAACGTTTCTTTCTACAAG
AACCTCGAAAAGGGCCTGGCACCAGGATCAGGGATATTTGTCGTCTGTGA
TGCAACGAATGGAGCGCCCTTGGCTATCTTCCAGGAAAACCGTTACCTAA
CTGATTTACGCACGGGAGCCGCCGGTGCCGTGTGCGTGAAGCACTTTGTC
GCTCGTCATCACAAGAAAGTGAGCTTCATCGGGGCAGGCGTAATTGCGAA
GGCGATGGCCCGAGCCTCCGCGTGCGTGCACGAGTTCGACGAAGCCTTCG
CGTTCGGCCTGGACCTCAAGCAGACCCAAGCCTTCGCAGAGGAGCTCGAA
GCCGAGCTTGGCTACAAGGTGCATGCGTGCGCCACGGCCGAGGAGGCTGT
GCGCTCTTCCGACGTTATCTTCACCCAGACACCCGGCAGCCACCCGGTCC
TGGAGCTGGACTGGCTCCGACCCCACGCAACGATCATCGCGAGTGGATCG
GACCAGCCAACGAAGAACGAGATCCCTACCGACGTGCAGAAGGCCAGCAA
GATGGTATGCGACCTGGTTCGACAGTGCAGTCGAGTTGGCGAGCTTCGCA
GCGCCATCAAGGCTGGTGTAATGACCGAAGACGATGTCCACGCCGAGATC
GGCGATGTGGTTCTCGGCGAGAAGCCAGGTCGGGAGGGAGAGGAGTTGAT
CCTCGTCGACCTTACGGGGACTGGTGCTCAGGACGCGGCAATTGGCCAAG
TGGCGTGGGATATCCTCTCGAAGAAGTAGGGCCTGGCACCAGGATCAGGG
ATATTTGTCGTCTGTGATGCAACGAATGGAGCGCCCTTGGCTATCTTCCA
GGAAAACCGTTACCTAACTGATTTACGCACGGGAGCCGCCGGTGCCGTGT
GCGTGAAGCACTTTGTCGCTCGTCATCACAAGAAAGTGAGCTTCATCGGG
GCAGGCGTAATTGCGAAGGCGATGGCCCGAGCCTCCGCGTGCGTGCACGA
GTTCGACGAAGCCTTCGCGTTCGGCCTGGACCTCAAGCAGACCCAAGCCT
TCGCAGAGGAGCTCGAAGCCGAGCTTGGCTACAAGGTGCATGCGTGCGCC
ACGGCCGAGGAGGCTGTGCGCTCTTCCGACGTTATCTTCACCCAGACACC
CGGCAGCCACCCGGTCCTGGAGCTGGACTGGCTCCGACCCCACGCAACGA
TCATCGCGAGTGGATCGGACCAGCCAACGAAGAACGAGATCCCTACCGAC
GTGCAGAAGGCCAGCAAGATGGTATGCGACCTGGTTCGACAGTGCAGTCG
AGTTGGCGAGCTTCGCAGCGCCATCAAGGCTGGTGTAATGACCGAAGACG
ATGTCCACGCCGAGATCGGCGATGTGGTTCTCGGCGAGAAGCCAGGTCGG
GAGGGAGAGGAGTTGATCCTCGTCGACCTTACGGGGACTGGTGCTCAGGA
CGCGGCAATTGGCCAAGTGGCGTGGGATATCCTCTCGAAGAAGTAG
back to top