mRNA_D-dichotoma_M_contig917.19914.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 2.510e-19 Identity = 54/139 (38.85%), Postives = 71/139 (51.08%), Query Frame = 1
Query: 85 ANNTFTGNTLLCQDGKFLDQISNETIAEEHIAYSTACSSCSNFTACVNCTVTDNDTVAFCHPVLGHTSSPDRDGTLASLELDDGYWRTSNASSNILQCYNKHACVGGVAEMCGDVNCEDGYCAEGYTGPYCAVCTANYS 501
+N TF+GN C FL+ S + + E ACS C T C C V C V+ H+ S TL +L +D GYWR +N+S+ +L CYN ACVGG+ YC EGY GPYCA+C+ +YS
Sbjct: 494 SNTTFSGNVFNCAPDTFLNYTSGDALDE-------ACSGCQ--TTCDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGA-------TEYCVEGYEGPYCAICSDDYS 614
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 6.680e-17 Identity = 59/160 (36.88%), Postives = 78/160 (48.75%), Query Frame = 1
Query: 25 GPAIAQTGMAEFVATQQVTFANNTFTGNTLLCQDGKFLDQISNETIAEEHIAYSTACSSCSNFTACVNCTVTDNDTVAFCHPVLGHTSSPDRDGTLASLELDDGYWRTSNASSNILQCYNKHACVGGVAEMCGDVNCEDGYCAEGYTGPYCAVCTANYSE 504
GPAI G E + + TFA+N +C G FLD + YS CS C C +C V D+ V C HT S T+ +L +D GYWR + ++ IL C+N AC+GG + D YCAEGY GPYCAVC+ ++E
Sbjct: 788 GPAIQNLGFMEGI--EACTFADND-----AVCPSGFFLDFVDGHR-------YSDVCSGCEE---CSDCGVADSSEVPTCTITPDHTQSTGN--TIETLSIDPGYWRATPSTIIILACHNSDACLGG------ETGAAD-YCAEGYEGPYCAVCSDGFAE 921
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 2.030e-15 Identity = 51/133 (38.35%), Postives = 74/133 (55.64%), Query Frame = 1
Query: 118 CQDGKFLDQISNETIAEEHIAYSTACSSCSNFTACV---NCTVTDNDTVAFCHPVLGHTSSPDRDGTLASLELDDGYWRTSNASSNILQCYNKHACVGGVAEMCGDVNCEDGYCAEGYTGPYCAVCTANYSEG 507
C++G F ++ E E+ + CS C++ A TV D D + C V + R GTLA+LE+ GY+R+S S++I +C+ + AC GG ++ G+ YCA GYTGPYCAVCTA +S G
Sbjct: 529 CEEGTFSTEVEIE--GEDVCRFGLVCSRCASECASELEDEVTVADPDLLPACEAVPEGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGG--KVVGE------YCAAGYTGPYCAVCTAGFSPG 651
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Match: D8LNY1_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY1_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 3.570e-15 Identity = 58/169 (34.32%), Postives = 77/169 (45.56%), Query Frame = 1
Query: 1 MSYNQASTGPAIAQTGMAEFVATQQVTFANNTFTGNTLLCQDGKFLDQISNETIAEEHIAYSTACSSCSNFTACVNCTVTDNDTVAFCHPVLGHTSSPDRDGTLASLELDDGYWRTSNASSNILQCYNKHACVGGVAEMCGDVNCEDGYCAEGYTGPYCAVCTANYSEG 507
+S N+A+ G A++ + FV ++ F N LLC D +F +N + AY AC C C CT+ + D C +T S DGTL SL L GYWR+SN S +I C +C GG +G CA GY G CA C +YS G
Sbjct: 489 LSKNRAALGSAVSS--VVSFV------LQDSDFRDNALLCDDDRFFLDWTNVS------AYDIACDQCD--LECEGCTIMNPDKALLCEDAFPNTDSLTADGTLESLNLAPGYWRSSNKSRDIRACPRATSCPGGT----------EGSCAVGYDGTLCAECAEDYSLG 631
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Match: A0A6H5KR67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR67_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 4.120e-14 Identity = 49/145 (33.79%), Postives = 70/145 (48.28%), Query Frame = 1
Query: 85 ANNTFTGNTLLCQDGKFLDQISNETIAEEHIAYST------ACSSCSNFTACVNCTVTDNDTVAFCHPVLGHTSSPDRDGTLASLELDDGYWRTSNASSNILQCYNKHACVGGVAEMCGDVNCEDGYCAEGYTGPYCAVCTANYS 501
+N +F+GN C FL+ +T+ ++ + ACS C C C V C V+ + S TL +L +D GYW +N+S+ +L CYN ACVGG+ YC EGY GPYCA+C+ +YS
Sbjct: 488 SNTSFSGNVFNCAPDTFLNYTVRDTMLTCSLSTMSGDPLDEACSGCQ--ATCDGCA--QPPAVPLCSDVIPDSRSDGGLVTLETLLIDPGYWMATNSSTEVLACYNVDACVGGITGA-------TEYCVEGYEGPYCAICSDDYS 621
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Match: A0A6H5L874_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L874_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 5.400e-14 Identity = 49/133 (36.84%), Postives = 72/133 (54.14%), Query Frame = 1
Query: 118 CQDGKFLDQISNETIAEEHIAYSTACSSCSNFTACV---NCTVTDNDTVAFCHPVLGHTSSPDRDGTLASLELDDGYWRTSNASSNILQCYNKHACVGGVAEMCGDVNCEDGYCAEGYTGPYCAVCTANYSEG 507
C++G F ++ E EE + CS C++ TV D D + C V + R GTLA+LE+ GY+R+ S++I +C+ + AC GG ++ G+ YCA GY+GPYCAVCTA +S G
Sbjct: 387 CEEGTFSTEVEIE--GEEVCRFGRVCSRCASECGSELQDEVTVADPDLLPACEAVPEGAQTTTRGGTLATLEILPGYYRSLATSTDIRECFFEDACEGG--QVVGE------YCATGYSGPYCAVCTAGFSRG 509
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Match: D7FWD7_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD7_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 1.020e-13 Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 1
Query: 88 NNTFTGNTLLCQDGKFLDQISNETIAEEHIAYSTACSSCSNFTACVNCTVTDND-TVAFCHPVLGHTSSPDRDGTLASLELDDGYWRTSNASSNILQCYNKHACVGGVAEMCGDVNCEDGYCAEGYTGPYCAVCTANYSEG 507
N TF NTL C G++ E ++ + AC+ CS + +VT D T+ C ++ T + T+A+L+L +GY+RTS S +++CY AC GG + YCA+GY GPYC+VC Y+ G
Sbjct: 268 NVTFASNTLNCPLGEYAYDKEAE---DDSCRFELACARCSADCDAIPSSVTMADSTIPVCLELMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTGACAGGTDP--------ENYCADGYEGPYCSVCADGYAPG 397
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 1.250e-12 Identity = 46/141 (32.62%), Postives = 69/141 (48.94%), Query Frame = 1
Query: 88 NNTFTGNTLLCQDGKFLDQISNETIAEEHIAYSTACSSCSNFTACVNCTVTDND-TVAFCHPVLGHTSSPDRDGTLASLELDDGYWRTSNASSNILQCYNKHACVGGVAEMCGDVNCEDGYCAEGYTGPYCAVCTANYSEG 507
N F NTL C G + ++ ++ + AC+ CS + +VT D T+ C + T + T+A+L+L +GY+RTS S +++CY AC GG YCA+GY GPYC+VC Y+ G
Sbjct: 509 NVAFASNTLNCPPG---ENAYDKEAEDDSCRFELACARCSADCDAIPSSVTMADSTIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPK--------NYCADGYEGPYCSVCADGYAPG 638
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 3.310e-12 Identity = 48/146 (32.88%), Postives = 75/146 (51.37%), Query Frame = 1
Query: 106 NTLLCQDGKFLDQISNETIAEEHI-------AYSTACSSCSNFTACVN-----CTVTDNDTVAFCHPVLGHTSSPDRDGTLASLELDDGYWRTSNASSNILQCYNKHACVGGVAEMCGDVNCEDGYCAEGYTGPYCAVCTANYSEG 507
N C++G+F ET+ ++ + + CS C++ C + + D +T+ C + + R TLA+LE+ G++R+S S++I +C++K AC GG A YCAEGY GPYCAVC+A YS G
Sbjct: 514 NDFYCEEGEF----GTETLIDKDLFGGADQCRFGRVCSRCAS--ECDSELESAAELVDAETLPTCEEAPEGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGT--------YCAEGYIGPYCAVCSAGYSPG 645
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 1.130e-11 Identity = 47/144 (32.64%), Postives = 72/144 (50.00%), Query Frame = 1
Query: 106 NTLLCQDGKFLDQISNETIAEEHI-------AYSTACSSCSNFTACV---NCTVTDNDTVAFCHPVLGHTSSPDRDGTLASLELDDGYWRTSNASSNILQCYNKHACVGGVAEMCGDVNCEDGYCAEGYTGPYCAVCTANYSEG 507
N C++G+F ET+ ++ + + CS C++ + D DT+ C + + R TLA+LE+ G++R+S S++I +C++K AC GG A YC+EGY GPYCAVC A YS G
Sbjct: 490 NDFYCEEGEF----GTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADTLPTCETAPEGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGT--------YCSEGYIGPYCAVCAAGYSPG 621 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig917.19914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig917.19914.1 >prot_D-dichotoma_M_contig917.19914.1 ID=prot_D-dichotoma_M_contig917.19914.1|Name=mRNA_D-dichotoma_M_contig917.19914.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=169bp MSYNQASTGPAIAQTGMAEFVATQQVTFANNTFTGNTLLCQDGKFLDQISback to top mRNA from alignment at D-dichotoma_M_contig917:262739..263958+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig917.19914.1 ID=mRNA_D-dichotoma_M_contig917.19914.1|Name=mRNA_D-dichotoma_M_contig917.19914.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=1220bp|location=Sequence derived from alignment at D-dichotoma_M_contig917:262739..263958+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig917:262739..263958+ >mRNA_D-dichotoma_M_contig917.19914.1 ID=mRNA_D-dichotoma_M_contig917.19914.1|Name=mRNA_D-dichotoma_M_contig917.19914.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1014bp|location=Sequence derived from alignment at D-dichotoma_M_contig917:262739..263958+ (Dictyota dichotoma ODC1387m male)back to top |