mRNA_D-dichotoma_M_contig917.19909.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig917.19909.1
Unique NamemRNA_D-dichotoma_M_contig917.19909.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig917.19909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig917contigD-dichotoma_M_contig917:246731..247969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size267
Cds size267
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931144.836541-CDS-D-dichotoma_M_contig917:246730..2469521622931144.836541-CDS-D-dichotoma_M_contig917:246730..246952Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig917 246731..246952 -
1690799634.623476-CDS-D-dichotoma_M_contig917:246730..2469521690799634.623476-CDS-D-dichotoma_M_contig917:246730..246952Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig917 246731..246952 -
1622931144.8532023-CDS-D-dichotoma_M_contig917:247924..2479691622931144.8532023-CDS-D-dichotoma_M_contig917:247924..247969Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig917 247925..247969 -
1690799634.6344817-CDS-D-dichotoma_M_contig917:247924..2479691690799634.6344817-CDS-D-dichotoma_M_contig917:247924..247969Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig917 247925..247969 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig917.19909.1prot_D-dichotoma_M_contig917.19909.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig917 246731..247969 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig917.19909.1

>prot_D-dichotoma_M_contig917.19909.1 ID=prot_D-dichotoma_M_contig917.19909.1|Name=mRNA_D-dichotoma_M_contig917.19909.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=89bp
VEPVWTSPSLLHVSEGMDNVLRDSNFVNMVSSAVMEGVTKGQCSTRNRQG
RTNPSDNTDMMHMLESVHARLRYLEPMHAQLRSLESMAN
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mRNA from alignment at D-dichotoma_M_contig917:246731..247969-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig917.19909.1 ID=mRNA_D-dichotoma_M_contig917.19909.1|Name=mRNA_D-dichotoma_M_contig917.19909.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=1239bp|location=Sequence derived from alignment at D-dichotoma_M_contig917:246731..247969- (Dictyota dichotoma ODC1387m male)
GTCGAGCCTGTCTGGACATCTCCGAGCCTTCTTCATGTCAGCGAGGTGCG
TACAGTACATGGTTTGTCCGGGTTAGGTGTCGTGTAGGTTATCGAACGTC
GTAGGCTTCCGACTGGCGCTGATATTCCGACGCGATGTTCATGTCCGAGG
ATTATGTTCATAACTCACGTCGACCCTTCTCTCAGAATGGAAGAAAGGGT
TAGAATTGATGGGAGCAAGTGTGCGTCGACAACGGTACACGATCCTACGT
CGTAGGAACTCTCCATTCCATCCTCCTAGTGAGCAGGATCCTTTATTTGG
CGTTAGTTTCACTCTTGCACGTGGCGCTCATGAAGATTTCAGGACTACGA
AAGGTATGCGTACGTCGTGATGTCGGGTCCCTCTGTCAGTTGTCAGCATA
GCTACGAATCGTGCAAGACAAGGTTTGCTACTCCCAACGAAGAGTGTGCA
GCACCATAGCATATGACTCAGGGTTAGATAATACGAATCTGGGCACCGAT
TGAGGTGCATGCAGCAAACGTTGTGCACAGAATACCCAGGCGTGACATGT
TTGACATGGGCGTTCAGTACCCGTGACCCTCTATTTCCGGAGGCCACTGT
TAATGAATATCTGTGAGAACTCAATGCAGCTGAGTCGGTTAGATTAGTTG
TTCATGGCCGCGACTGCGAGGCTCCCTTGTCACCTGTATTTTAGTACAGA
ATACATGAATTAATTATCGTGCATCACGATGAAATATGGACGTTTTCTGC
GTCTTCGATCGGCAAGAGGTACATGAGCTGATGCGGTCGGTCACCCTCCA
TGTACCGCCAAAGGAGAACGTTCCATGTTCACAGTATCGTAAGGTTCGCT
GTGGTGTTCAAGCGTTCAGAAGAAAACTGGTTTTTTCTCGTAATGAGGAG
GCCCGAGTCACGTTTGGCGTTGCAGTAATGCATGTTACTCTGTAGGACGC
ACCCTACTTTACCGGTTTCGAATCTATGCCTTCCCTTCCCTGTCCATGCG
CCCTGCCCTCTCTCCAGGGGATGGATAACGTGCTGCGCGACTCAAACTTT
GTCAACATGGTTTCTTCAGCCGTCATGGAGGGTGTGACGAAAGGGCAGTG
CAGCACGCGCAATAGGCAGGGTCGGACTAACCCCAGCGACAACACAGACA
TGATGCACATGCTCGAGTCTGTTCATGCACGACTGCGCTACCTCGAGCCT
ATGCACGCACAACTGCGCAGCCTGGAGTCTATGGCGAAC
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig917:246731..247969-

>mRNA_D-dichotoma_M_contig917.19909.1 ID=mRNA_D-dichotoma_M_contig917.19909.1|Name=mRNA_D-dichotoma_M_contig917.19909.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=534bp|location=Sequence derived from alignment at D-dichotoma_M_contig917:246731..247969- (Dictyota dichotoma ODC1387m male)
GTCGAGCCTGTCTGGACATCTCCGAGCCTTCTTCATGTCAGCGAGGTCGA
GCCTGTCTGGACATCTCCGAGCCTTCTTCATGTCAGCGAGGGGATGGATA
ACGTGCTGCGCGACTCAAACTTTGTCAACATGGTTTCTTCAGCCGTCATG
GAGGGTGTGACGAAAGGGCAGTGCAGCACGCGCAATAGGCAGGGTCGGAC
TAACCCCAGCGACAACACAGACATGATGCACATGCTCGAGTCTGTTCATG
CACGACTGCGCTACCTCGAGCCTATGCACGCACAACTGCGCAGCCTGGAG
TCTATGGCGAACGGGATGGATAACGTGCTGCGCGACTCAAACTTTGTCAA
CATGGTTTCTTCAGCCGTCATGGAGGGTGTGACGAAAGGGCAGTGCAGCA
CGCGCAATAGGCAGGGTCGGACTAACCCCAGCGACAACACAGACATGATG
CACATGCTCGAGTCTGTTCATGCACGACTGCGCTACCTCGAGCCTATGCA
CGCACAACTGCGCAGCCTGGAGTCTATGGCGAAC
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