mRNA_D-dichotoma_M_contig914.19892.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig914.19892.1
Unique NamemRNA_D-dichotoma_M_contig914.19892.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Match: D8LPM3_ECTSI (Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM3_ECTSI)

HSP 1 Score: 477 bits (1228), Expect = 6.760e-161
Identity = 235/335 (70.15%), Postives = 277/335 (82.69%), Query Frame = 2
Query:   29 MGSGGS---KIKSLQQDLRGKHYVVTGANTGLGYCNVRELAKMGAKVTLACRSEARGKAAVEKLRKEALEKPVKEGVSLLEGLEDVDVELEVVDLGSLHSIIDFATKFRASGKKIDALINNAGIMAIPERKETVDGIEMQIGVNHFGAHFLTRLMEPAILDGGRVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAYGRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRNMDDNSFVSVMTRAMAPFYSLLLSTPLQGSLTTLMCAIDPTLGTPEVSGKYWGALKQEEPSELASDPENPPRYWAITEEILEAKLGKKVDEVI 1024
            MGS  S   K KS+ QDLRGKH+VVTGANTGLGY   RELAKMGA VTLACRS  RG+ A++K++ EALEKPVKEGV LLEGL DVDV LEV+DLGSL S+I FA +F+ASG K+D LINNAGIMAIPER+ETVDG+EMQIGVNHFG H LTRLMEP + DGGRV+F+SS+GHR+PPG    TLD+DNVN+EKPD+Y++W AYGRSKLANILDAKEFAKRL  RGI+TYA HPG+ NTELMRNM D+S +S +TR  AP    +L+TPL G+LTT+ CA+DP+L  PE SGKYWG +K+E PSELA DP NPPR W +TE +LEAKLGK VD+++
Sbjct:    1 MGSAHSTNCKAKSVCQDLRGKHFVVTGANTGLGYATTRELAKMGAAVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLLEGLTDVDVRLEVLDLGSLQSVIAFAQRFKASGTKVDVLINNAGIMAIPERRETVDGLEMQIGVNHFGGHLLTRLMEPLMNDGGRVIFLSSLGHRQPPGQAKVTLDFDNVNYEKPDTYNSWMAYGRSKLANILDAKEFAKRLEARGISTYACHPGIVNTELMRNMTDSSLMSRVTRLTAPLSRFILATPLTGALTTIRCAVDPSLAGPEFSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEAKLGKNVDDLL 335          
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Match: D8LP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP30_ECTSI)

HSP 1 Score: 430 bits (1106), Expect = 2.440e-140
Identity = 215/348 (61.78%), Postives = 263/348 (75.57%), Query Frame = 2
Query:    2 VLI*KRAPTMGSGGS-----KIKSLQQDLRGKHYVVTGANTGLGYCNVRELAKMGAKVTLACRSEARGKAAVEKLRKEALEKPVKEGVSLLEGLEDVDVELEVVDLGSLHSIIDFATKFRASGKKIDALINNAGIMAIPERKETVDGIEMQIGVNHFGAHFLTRLMEPAILDGGRVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAYGRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRNMDDNSFVSVMTRA-MAPFYSLLLSTPLQGSLTTLMCAIDPTLGTPEVSGKYWGALKQEEPSELASDPENPPRYWAITEEILEAKLGKKVDEVIP 1027
            +L+  R+  MG  G      K KSL+QDLRGKH++VTGANTGLGY   RELAKMGAKVTLACRS  RG+ A++K++ EALEKPVKEGV LL+GL +VDV LEV+DLGSL S++ FA +F+ASG K+D L+NNAGI  +P R+ET DG+EMQIGVNHFG H LTRLMEP++ DGGRV+F+SS+ H RPPGMP TT DWDNVNF+KP +YD   AY RSKLANI DAKEFAKRLA R I TYA  PG+  TE+ R +     +  +  A       + L  PL G+LTT+ CA+DP+L  PE+SGKYWG +K+E PSELA DP NPPR W +TE +LE KLGK+VD+V+P
Sbjct:  139 LLLQSRSAGMGWFGDSKATRKAKSLRQDLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLLDGLTEVDVRLEVLDLGSLQSVVAFAQRFKASGTKVDVLVNNAGIFGVPNRRETADGLEMQIGVNHFGGHLLTRLMEPSMNDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLMMPIVNAGYVALGWVWLKGPLDGALTTVRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEEKLGKRVDDVVP 486          
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Match: A0A6H5JP92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP92_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 4.110e-140
Identity = 211/328 (64.33%), Postives = 250/328 (76.22%), Query Frame = 2
Query:   47 KIKSLQQDLRGKHYVVTGANTGLGYCNVRELAKMGAKVTLACRSEARGKAAVEKLRKEALEKPVKEGVSLLEGLEDVDVELEVVDLGSLHSIIDFATKFRASGKKIDALINNAGIMAIPERKETVDGIEMQIGVNHFGAHFLTRLMEPAILDGGRVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAYGRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRNMDDNSFVSVMTRA-MAPFYSLLLSTPLQGSLTTLMCAIDPTLGTPEVSGKYWGALKQEEPSELASDPENPPRYWAITEEILEAKLGKKVDEVIP 1027
            K KSL+QDLRGKH++VTGANTGLGY   RELAKMGAKVTLACRS  RG+ A++KL+ E LEKP KEGV LL+GL +VDV LEV+DLGSL S+I FA  F+ASG K+D L+NNAGI  +P R+ET DG+EM IGVNHFG H LTRLMEP+I DGGRV+F+SS+ H RPPGMP TT DWDN+NF+KP +YD   AY RSKLANI DAKEFAKRLA R I TYA  PG+  TE+ R +     +  +  A  A    + L  PL G+LTT+ CA+DP L  PE+SGKYWG +K+E PSELA DP NPPR W ITE +LE KLGK+VD+V P
Sbjct:   12 KAKSLRQDLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKLKAEVLEKPAKEGVDLLDGLTEVDVRLEVLDLGSLRSVIAFAQGFKASGTKVDVLVNNAGIFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPSINDGGRVLFLSSLTHSRPPGMPKTTWDWDNMNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYAALGWVWLKGPLDGALTTIRCAVDPCLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEDKLGKRVDDVFP 339          
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Match: D7FTL4_ECTSI (Similar to Retinol dehydrogenase 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL4_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 2.570e-75
Identity = 124/211 (58.77%), Postives = 149/211 (70.62%), Query Frame = 2
Query:  392 MAIPERKETVDGIEMQIGVNHFGAHFLTRLMEPAILDGGRVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAYGRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRNMDDNSFVSVMTRAMAPFYSLLLSTPLQGSLTTLMCAIDPTLGTPEVSGKYWGALKQEEPSELASDPENPPRYWAITEEILEAKLGKKVDEVI 1024
            MAIP  + TVDG+E QIGVNHFG H LTRLME  I+DGGRVVF+SS+ H+          DWDNVN+ KP+ Y    AYGRSKLAN+LDAK FA  L+ R I TYA HPGV NT+L RN+ D   +S + R      + +L++PL GSLTTL CAIDP L  PE SGKYW  +KQ +PS LASDP NPPR W ITEE+LE KLGKK++ ++
Sbjct:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKH------GGWDWDNVNYTKPNKYVPMIAYGRSKLANVLDAKAFAGHLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVAKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVQPSALASDPANPPRLWEITEELLETKLGKKIENLL 205          
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Match: A0A6H5JGN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN4_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 4.210e-59
Identity = 104/178 (58.43%), Postives = 127/178 (71.35%), Query Frame = 2
Query:  245 GVSLLEGLEDVDVELEVVDLGSLHSIIDFATKFRASGKKIDALINNAGIMAIPERKETVDGIEMQIGVNHFGAHFLTRLMEPAILDGGRVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAYGRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRNMDDNSFVSVM 778
            GV LLEGL DVDV++EV+DLG L S++ FA + ++SG+KID LI+NAGIMAIP  K +VDG+E QIGVNHF  H L+RLM   I+DGGRVVF SS+ H+          DWDNVN+ KP+ +    AYGRSKLAN+LDAK FA  L+ R I TYA HPGV NT+L RN  D   +S M
Sbjct:   29 GVDLLEGLSDVDVQVEVLDLGVLQSVVSFAQRLKSSGQKIDVLIDNAGIMAIPTEKRSVDGLEKQIGVNHFVTHLLSRLMGKQIIDGGRVVFFSSVAHKH------GGCDWDNVNYTKPNEHGPMIAYGRSKLANVLDAKGFAGHLSDRRINTYALHPGVVNTDLFRNATDGRLISRM 200          
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Match: A0A433SZU2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SZU2_ELYCH)

HSP 1 Score: 201 bits (510), Expect = 9.290e-55
Identity = 125/314 (39.81%), Postives = 176/314 (56.05%), Query Frame = 2
Query:   65 QDLRGKHYVVTGANTGLGYCNVRELAKMGAKVTLACRSEARGKAAVEKLRKEALEKPVKEGVSLLEGLEDVDVELEVVDLGSLHSIIDFATKFRASGKKIDALINNAGIMAIPERKETVDGIEMQIGVNHFGAHFLTRLMEPAI--LDGGRVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAYGRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRNMDDNSFVSVMTRAMAPFYSLLLSTPLQGSLTTLMCAIDPTLGTPEVSGKYWGALKQEEPSELASDPENPPRYWAITEEILEAKL 1000
            + L  K  ++TGANTGLG    R+LAK G ++ +ACR+  +G+A     RKE +E+   E           DV ++ +DL S  SI +FA KF  +  ++D LINNAG+MA P+   T DG+EMQIG NHFG   LT L+   +      R+V +SS+ H         ++ WD++N +K   Y  W AYG+SKLANIL   E + RL G G+T  + HPG  NT+L R+ +   F     + + P   L   TP+ G+ TTL CA+ P L   EVSGKY+   K++ PS       +  R W +TEEI++ KL
Sbjct:    9 ETLELKTVLITGANTGLGKETARDLAKRGGRIIMACRNLEKGEAT----RKEIVEETKNE-----------DVVVQELDLASFESIQNFAKKFNETETRLDILINNAGVMACPKTL-TKDGLEMQIGTNHFGHFLLTNLLLDKLKACSPSRIVILSSMAHA------FASIKWDDINSDK--KYGDWAAYGQSKLANILHCLELSNRLKGTGVTVNSVHPGGVNTDLQRHTNRGIF-----KLLKPLSKLFFKTPVDGAQTTLYCALSPDLE--EVSGKYFVDCKEKAPSRRGQSEADAKRLWELTEEIIQQKL 291          
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Match: A0A3S0Z7Y7_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0Z7Y7_ELYCH)

HSP 1 Score: 200 bits (509), Expect = 2.640e-54
Identity = 127/316 (40.19%), Postives = 181/316 (57.28%), Query Frame = 2
Query:   62 QQDLRGKHYVVTGANTGLGYCNVRELAKMGAKVTLACRSEARGKAAVEKLRKEALEKPVKEGVSLLEGLEDVDVELEVVDLGSLHSIIDFATKFRASGKKIDALINNAGIMAIPERKETVDGIEMQIGVNHFGAHFLTRLMEPAILDG--GRVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAYGRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRN--MDDNSFVSVMTRAMAPFYSLLLSTPLQGSLTTLMCAIDPTLGTPEVSGKYWGALKQEEPSELASDPENPPRYWAITEEILEAK 997
            ++ L GK  V+TG NTG+G+   ++LA+ GA++ +ACR   R +AA  K++               + +   +V  + +DL S  SI  F  +F  +  ++D LINNAG+M  P R  T DG+EMQ+G NHFG   LT L+   +      R+V VSS  H R  G     +++D++N EK  SY+   AY +SKLANIL  KE  +RL G G+T YA HPGV  TEL R+  + +N  +  +T   AP   +LL TPL+G+ TTL CA++P   T  +SGKY+   K++EPS  A D E   R W ++ EI E K
Sbjct:   60 KEKLNGKTVVITGCNTGIGFETAKDLAQRGARIIMACRDMERCEAAASKIK---------------DIVNSNNVICKKLDLSSFESIRAFCDEFNRTEARLDILINNAGVMMCP-RMLTKDGLEMQLGTNHFGHFLLTNLLLDKLKASRPSRIVAVSSRAHTRTQG-----INFDDINSEK--SYEKMTAYSQSKLANILHVKELTRRLEGTGVTAYALHPGVVATELPRHIALANNPIILFLT---APLRYILLKTPLEGAQTTLACALNPAWET--ISGKYYSDCKEKEPSLPAQDAEAAKRLWDVSVEITEGK 347          
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Match: A0A6J8C7G3_MYTCO (RDH12 n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8C7G3_MYTCO)

HSP 1 Score: 189 bits (480), Expect = 1.480e-50
Identity = 124/321 (38.63%), Postives = 183/321 (57.01%), Query Frame = 2
Query:   35 SGGSKIKSLQQDLRGKHYVVTGANTGLGYCNVRELAKMGAKVTLACRSEARGKAAVEKLRKEALEKPVKEGVSLLEGLEDVDVELEVVDLGSLHSIIDFATKFRASGKKIDALINNAGIMAIPERKETVDGIEMQIGVNHFGAHFLTRLM--EPAILDGGRVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAYGRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRNMDDNSFVSVMTRAMAPFYSLLLSTPLQGSLTTLMCAIDPTLGTPEVSGKYWGALKQEEPSELASDPENPPRYWAITEEILE 991
            + G +  +    L GKH ++TGANTG+G     +LA  GAKVTLACR   R + A + +++             + G +++ V+   ++L SL S+  FA     + K+ID LINNAGIM  P  K T DG EMQ GVNH G   LT L+  +  I    RVV VSS+ H R        +++D++N EK  +YD   AY +SKLAN+L + E AK+L G G+TTY+ HPGV NTEL R++      S+  R +      L+ TP +G+ TT+ CA+D +L   E +GKY+    ++ PS+ A + EN  R W ++ ++++
Sbjct:   34 AAGVRYTNTTTRLDGKHVIITGANTGIGKETAIDLANRGAKVTLACRDMKRAQDAADDIKQ-------------ITGNQNIIVKK--LNLASLKSVRSFAEDINKNEKRIDVLINNAGIMRCPYWK-TDDGFEMQFGVNHLGHFLLTNLLLDKLKISAPSRVVTVSSLAHER------GKMNFDDLNQEK--NYDKGSAYSQSKLANVLFSSELAKKLQGTGVTTYSLHPGVINTELSRHVTQ----SMGWRMLLSVIKYLIKTPNEGAQTTIYCAVDESLS--EETGKYYSDCAKKTPSKEALNDENAKRLWKLSAKMVD 324          
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Match: UPI001F502F28 (retinol dehydrogenase 13-like n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F502F28)

HSP 1 Score: 189 bits (479), Expect = 1.590e-50
Identity = 126/301 (41.86%), Postives = 172/301 (57.14%), Query Frame = 2
Query:   71 LRGKHYVVTGANTGLGYCNVRELAKMGAKVTLACRSEARGKAAVEKLRKEALEKPVKEGVSLLEGLEDVDVELEVVDLGSLHSIIDFATKFRASGKKIDALINNAGIMAIPERKETVDGIEMQIGVNHFGAHFLTRLMEPAILDGG--RVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAYGRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRNMDDNSFVSVMTRAMAPFYSLLLSTPLQGSLTTLMCAIDPTLGTPEVSGKYWGALKQEEPSELASDPENPPRYW 967
            L GK  ++TGANTG+G     +LA+ GA V LACR E + +AA  +LRK          +   +G  +V V+   +DL SL S+ D A +       I  LINNAG+MA P R  T DG EMQ+GVNH G    T L+ P +      R+V VSS+ HR        ++++D++ +EK  SY A  AYGRSKLANIL AKE AKRL G G+TTY+ HPGV  TEL R++DD SF   ++        L L +P QG+ TT+ CA++ ++     SG Y+   K+  P+  A + E+  R W
Sbjct:   15 LDGKTAIITGANTGIGKETAMDLARRGATVVLACRDEQKAEAAATELRKR---------LRSYQGAGEVRVQR--LDLSSLTSVRDCARRLLEQHPNIHLLINNAGVMACP-RSLTEDGFEMQLGVNHLGHFLFTCLLLPRLRASAPARIVVVSSLAHRN------GSINFDDLMWEK--SYSAVGAYGRSKLANILFAKELAKRLEGSGVTTYSLHPGVIATELGRHLDD-SFFPGLSWIFGKLGRLYLKSPKQGAQTTIYCAVEESISNE--SGLYYSGCKKASPTRRARNAESARRLW 292          
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Match: A0A1D2MFP1_ORCCI (Retinol dehydrogenase 13 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MFP1_ORCCI)

HSP 1 Score: 182 bits (461), Expect = 8.880e-48
Identity = 125/320 (39.06%), Postives = 177/320 (55.31%), Query Frame = 2
Query:   29 MGSGGSKIKSLQQDLRGKHYVVTGANTGLGYCNVRELAKMGAKVTLACRSEARGKAAVEKLRKEALEKPVKEGVSLLEGLEDVDVELEVVDLGSLHSIIDFATKFRASGKKIDALINNAGIMAIPERKETVDGIEMQIGVNHFGAHFLTRLMEPAILDGG--RVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAYGRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRNMD-DNSFVSVMTRAMAPFYSLLLSTPLQGSLTTLMCAIDPTLGTPEVSGKYWGALKQEEPSELASDPENPPRYWAITE 979
            +G G     +++ D  GK  +VTG+NTG+G     ELA+ G +V +ACR        +EK R    E        ++    +  V     DL    SI  FA +F+A   ++D LINN GIM  P R  T  GIEMQ+GVNH G   LT L+   +      R+V +SSI H R       T++++++N EK  SYD   AY +SKLANIL  KE A+RL G G+T  A HPG+  TEL R+M  +NS  + +   + P  S  L +P+QG+LT++  A++P+L +   +GKY+   KQ+EPSE A DP    + WA +E
Sbjct:   29 IGHGHKLPDTIRAD--GKVCIVTGSNTGIGKETAMELARRGCRVYMACRD-------LEKCRTARAE--------IISDTLNQHVHCRKCDLADFDSIRQFAEEFKAKESRLDILINNGGIMRCP-RTLTKQGIEMQLGVNHMGHFLLTNLLLDNLQSSAPSRIVNLSSIAHTR------GTINFEDLNSEK--SYDPGAAYNQSKLANILFTKELAERLKGSGVTVNAVHPGIVKTELGRHMGFENSITASIF--VKPILSFFLKSPVQGALTSIYVALEPSLES--TTGKYFSDCKQKEPSEQAKDPTLAKKLWATSE 318          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig914.19892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM3_ECTSI6.760e-16170.15Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID... [more]
D8LP30_ECTSI2.440e-14061.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP92_9PHAE4.110e-14064.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTL4_ECTSI2.570e-7558.77Similar to Retinol dehydrogenase 12 n=1 Tax=Ectoca... [more]
A0A6H5JGN4_9PHAE4.210e-5958.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A433SZU2_ELYCH9.290e-5539.81Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A3S0Z7Y7_ELYCH2.640e-5440.19Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A6J8C7G3_MYTCO1.480e-5038.63RDH12 n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8C7G3_... [more]
UPI001F502F281.590e-5041.86retinol dehydrogenase 13-like n=2 Tax=Schistocerca... [more]
A0A1D2MFP1_ORCCI8.880e-4839.06Retinol dehydrogenase 13 n=1 Tax=Orchesella cincta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig914contigD-dichotoma_M_contig914:218070..220423 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score481.9
Seed ortholog evalue2.5e-133
Seed eggNOG ortholog2880.D8LPM3
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size2227
Cds size1005
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig914.19892.1prot_D-dichotoma_M_contig914.19892.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig914 219264..220395 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931143.606072-UTR-D-dichotoma_M_contig914:218069..2192631622931143.606072-UTR-D-dichotoma_M_contig914:218069..219263Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig914 218070..219263 -
1690799633.939936-UTR-D-dichotoma_M_contig914:218069..2192631690799633.939936-UTR-D-dichotoma_M_contig914:218069..219263Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig914 218070..219263 -
1622931143.6502507-UTR-D-dichotoma_M_contig914:220395..2204231622931143.6502507-UTR-D-dichotoma_M_contig914:220395..220423Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig914 220396..220423 -
1690799633.9713447-UTR-D-dichotoma_M_contig914:220395..2204231690799633.9713447-UTR-D-dichotoma_M_contig914:220395..220423Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig914 220396..220423 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931143.6239226-CDS-D-dichotoma_M_contig914:219263..2200521622931143.6239226-CDS-D-dichotoma_M_contig914:219263..220052Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig914 219264..220052 -
1690799633.9516764-CDS-D-dichotoma_M_contig914:219263..2200521690799633.9516764-CDS-D-dichotoma_M_contig914:219263..220052Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig914 219264..220052 -
1622931143.6358657-CDS-D-dichotoma_M_contig914:220179..2203951622931143.6358657-CDS-D-dichotoma_M_contig914:220179..220395Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig914 220180..220395 -
1690799633.961508-CDS-D-dichotoma_M_contig914:220179..2203951690799633.961508-CDS-D-dichotoma_M_contig914:220179..220395Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig914 220180..220395 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig914.19892.1

>prot_D-dichotoma_M_contig914.19892.1 ID=prot_D-dichotoma_M_contig914.19892.1|Name=mRNA_D-dichotoma_M_contig914.19892.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=335bp
MGSGGSKIKSLQQDLRGKHYVVTGANTGLGYCNVRELAKMGAKVTLACRS
EARGKAAVEKLRKEALEKPVKEGVSLLEGLEDVDVELEVVDLGSLHSIID
FATKFRASGKKIDALINNAGIMAIPERKETVDGIEMQIGVNHFGAHFLTR
LMEPAILDGGRVVFVSSIGHRRPPGMPATTLDWDNVNFEKPDSYDAWQAY
GRSKLANILDAKEFAKRLAGRGITTYAAHPGVANTELMRNMDDNSFVSVM
TRAMAPFYSLLLSTPLQGSLTTLMCAIDPTLGTPEVSGKYWGALKQEEPS
ELASDPENPPRYWAITEEILEAKLGKKVDEVIPA*
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mRNA from alignment at D-dichotoma_M_contig914:218070..220423-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig914.19892.1 ID=mRNA_D-dichotoma_M_contig914.19892.1|Name=mRNA_D-dichotoma_M_contig914.19892.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=2354bp|location=Sequence derived from alignment at D-dichotoma_M_contig914:218070..220423- (Dictyota dichotoma ODC1387m male)
GGTTTTGATATAGAAGAGAGCACCAACCATGGGTTCGGGAGGGTCCAAGA TCAAGTCCTTACAGCAGGACCTTCGAGGCAAGCACTACGTGGTGACTGGT GCCAATACCGGCCTTGGTTACTGCAACGTGCGCGAGCTGGCCAAGATGGG AGCGAAGGTGACCTTGGCCTGCAGGAGCGAGGCGCGCGGAAAGGCTGCCG TGGAGAAGCTTCGAAAGGAGGCGCTCGAGAAGCCAGTCAAGGAGGTGAGG AAATGAGACGCCGAACGGCGACCTTAGAGCGCGCATATATTGCATTATTT CAAGCTTGAGCTGCGTGAAGACCCACGTGGTCGGTGATCGCTGATCAGTG GTCGGTGCAACACACGAACAGGGTGTAAGCCTCCTGGAGGGGCTGGAAGA TGTGGACGTGGAGCTCGAGGTCGTCGACCTCGGATCGCTGCATTCCATCA TCGACTTCGCCACGAAATTCCGGGCGTCGGGAAAGAAGATCGACGCGCTC ATCAACAATGCCGGCATCATGGCCATCCCGGAGAGGAAGGAGACTGTGGA CGGTATCGAGATGCAGATTGGAGTGAATCACTTCGGGGCTCACTTCCTGA CCCGACTGATGGAGCCGGCGATCTTAGACGGCGGCCGTGTGGTGTTTGTT TCTTCCATCGGGCACCGAAGGCCCCCGGGCATGCCCGCGACAACTCTCGA TTGGGACAACGTCAACTTCGAGAAGCCGGATTCCTACGACGCGTGGCAGG CGTACGGGAGGTCGAAGTTGGCGAACATCTTGGACGCGAAGGAGTTCGCC AAGCGGCTGGCCGGGCGAGGGATAACCACCTACGCCGCCCACCCCGGGGT CGCGAACACAGAGCTCATGCGTAACATGGACGACAACAGCTTTGTATCGG TTATGACTCGAGCGATGGCGCCTTTTTACTCGTTGCTCCTTAGCACTCCG CTGCAGGGTTCGCTCACGACGCTGATGTGCGCGATAGACCCTACGCTAGG TACACCTGAGGTTTCAGGCAAGTACTGGGGGGCTTTGAAACAGGAAGAGC CTTCGGAGCTCGCTTCGGACCCGGAGAACCCGCCTAGGTATTGGGCGATA ACGGAGGAAATTCTCGAGGCCAAGCTTGGGAAGAAGGTGGATGAAGTAAT CCCCGCTTAAGCGTGTGCCTTTCGCGAGGCAGAGGGAGACAGCCACCCGG GGATGGTTAGTGGGACAGGTTTGGTGTTTCCATCAGCCGGAGCACTGCAC TGTGCAGCGTGTCGATGTCTATCTATCATGAAATTGGTCAGAGACAGTGC TTGCACAATATGGGGGAAGGCTCGGATCCCGCCAGCTGTTTCCTTTTCGA AGGGAGGTCGAAGCGCGTGGAGAAGCTGGCGACGGACTTGGTGCGCAGTG TTTCATAGGATTCAAGTAAGACGGCTTCGTTCCCTGTTGGGGGCTGCGCT ATGAGGCTCCACGTGGTAGATTCGATAGGCTCTCGTGAACTTACTCGTTC GAGACGTGGCTGTGCTCGACGCTGAACCTTGTGAGGCAGAAAAGATCTTT GGCAGAGATTTTCTTGATTGCGCTGAAGCCGGGCGGTAACGTTCAGCTGC AACAGGAGAATGTCAGGAGTTCTTGCGGTGCTTCCCCAGTGGTATTGTTG TGAAGAAACGGGGGATGTAAATTCGGCAACCGTGCTGACGGTTGTTGGTG ACGGTCATGGAGTGAGGGGGGAAATGGAGATGAACTCGGGAGTTGCTTGT TGGGATATAGGAATCGAGATTTGGAGCTGGGTTCGTTTTGCCTTCGTGTT GGTCCTTGTCCTCTCTGGGGTCAGGATCTTGAACCATACTAATTGCACCG TAGCATATTGCCGCTAACTGCTGTAAAGCTTCCTGAAACCATCTGTCTCC GCGGTTGCACGTGATGTCCTGTTCGTGAGAGGAGGTCACGTTCCGAACGC GTGTGAGAGATGTAAAACCCATCTTAGCGTGAGAAGGGTCAAGGTACCAC CACCTTTTGTCGAATCGACCGTGTTCGGCGCGGCGTGATGGGACTACAGT GCGGCAGCGTAGCGAGATCGCTTCTCGCCGTCTTCTCGGAAGATACAGTG GTTGCAACTAAAAGATAGATCAAGCTTCAAACGGCTGTATATTGAATGGC AGTAAAACTGGATCCGAAGACCCCGACGATTCTTTTGTTCCGTTTCAAGA AGTGTACATGGTCTACTACAATGGTTGAAAGTGTAAAGAATGAATCCTCG GGAGCCCGTTGCGTCCATTCGTCCATTTTGTAGACACATTGACGAATCCT TCTTTTTTTTCATGTTTACAAACACTGGATTCGTCGACGTGTAGTAGCAG CAAG
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig914:218070..220423-

>mRNA_D-dichotoma_M_contig914.19892.1 ID=mRNA_D-dichotoma_M_contig914.19892.1|Name=mRNA_D-dichotoma_M_contig914.19892.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=2010bp|location=Sequence derived from alignment at D-dichotoma_M_contig914:218070..220423- (Dictyota dichotoma ODC1387m male)
ATGGGTTCGGGAGGGTCCAAGATCAAGTCCTTACAGCAGGACCTTCGAGG
CAAGCACTACGTGGTGACTGGTGCCAATACCGGCCTTGGTTACTGCAACG
TGCGCGAGCTGGCCAAGATGGGAGCGAAGGTGACCTTGGCCTGCAGGAGC
GAGGCGCGCGGAAAGGCTGCCGTGGAGAAGCTTCGAAAGGAGGCGCTCGA
GAAGCCAGTCAAGGAGATGGGTTCGGGAGGGTCCAAGATCAAGTCCTTAC
AGCAGGACCTTCGAGGCAAGCACTACGTGGTGACTGGTGCCAATACCGGC
CTTGGTTACTGCAACGTGCGCGAGCTGGCCAAGATGGGAGCGAAGGTGAC
CTTGGCCTGCAGGAGCGAGGCGCGCGGAAAGGCTGCCGTGGAGAAGCTTC
GAAAGGAGGCGCTCGAGAAGCCAGTCAAGGAGGGTGTAAGCCTCCTGGAG
GGGCTGGAAGATGTGGACGTGGAGCTCGAGGTCGTCGACCTCGGATCGCT
GCATTCCATCATCGACTTCGCCACGAAATTCCGGGCGTCGGGAAAGAAGA
TCGACGCGCTCATCAACAATGCCGGCATCATGGCCATCCCGGAGAGGAAG
GAGACTGTGGACGGTATCGAGATGCAGATTGGAGTGAATCACTTCGGGGC
TCACTTCCTGACCCGACTGATGGAGCCGGCGATCTTAGACGGCGGCCGTG
TGGTGTTTGTTTCTTCCATCGGGCACCGAAGGCCCCCGGGCATGCCCGCG
ACAACTCTCGATTGGGACAACGTCAACTTCGAGAAGCCGGATTCCTACGA
CGCGTGGCAGGCGTACGGGAGGTCGAAGTTGGCGAACATCTTGGACGCGA
AGGAGTTCGCCAAGCGGCTGGCCGGGCGAGGGATAACCACCTACGCCGCC
CACCCCGGGGTCGCGAACACAGAGCTCATGCGTAACATGGACGACAACAG
CTTTGTATCGGTTATGACTCGAGCGATGGCGCCTTTTTACTCGTTGCTCC
TTAGCACTCCGCTGCAGGGTTCGCTCACGACGCTGATGTGCGCGATAGAC
CCTACGCTAGGTACACCTGAGGTTTCAGGCAAGTACTGGGGGGCTTTGAA
ACAGGAAGAGCCTTCGGAGCTCGCTTCGGACCCGGAGAACCCGCCTAGGT
ATTGGGCGATAACGGAGGAAATTCTCGAGGCCAAGCTTGGGAAGAAGGTG
GATGAAGTAATCCCCGCTTAAGGTGTAAGCCTCCTGGAGGGGCTGGAAGA
TGTGGACGTGGAGCTCGAGGTCGTCGACCTCGGATCGCTGCATTCCATCA
TCGACTTCGCCACGAAATTCCGGGCGTCGGGAAAGAAGATCGACGCGCTC
ATCAACAATGCCGGCATCATGGCCATCCCGGAGAGGAAGGAGACTGTGGA
CGGTATCGAGATGCAGATTGGAGTGAATCACTTCGGGGCTCACTTCCTGA
CCCGACTGATGGAGCCGGCGATCTTAGACGGCGGCCGTGTGGTGTTTGTT
TCTTCCATCGGGCACCGAAGGCCCCCGGGCATGCCCGCGACAACTCTCGA
TTGGGACAACGTCAACTTCGAGAAGCCGGATTCCTACGACGCGTGGCAGG
CGTACGGGAGGTCGAAGTTGGCGAACATCTTGGACGCGAAGGAGTTCGCC
AAGCGGCTGGCCGGGCGAGGGATAACCACCTACGCCGCCCACCCCGGGGT
CGCGAACACAGAGCTCATGCGTAACATGGACGACAACAGCTTTGTATCGG
TTATGACTCGAGCGATGGCGCCTTTTTACTCGTTGCTCCTTAGCACTCCG
CTGCAGGGTTCGCTCACGACGCTGATGTGCGCGATAGACCCTACGCTAGG
TACACCTGAGGTTTCAGGCAAGTACTGGGGGGCTTTGAAACAGGAAGAGC
CTTCGGAGCTCGCTTCGGACCCGGAGAACCCGCCTAGGTATTGGGCGATA
ACGGAGGAAATTCTCGAGGCCAAGCTTGGGAAGAAGGTGGATGAAGTAAT
CCCCGCTTAA
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