mRNA_D-dichotoma_M_contig1024.298.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Match: A0A6H5KXC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC8_9PHAE) HSP 1 Score: 148 bits (374), Expect = 5.390e-34 Identity = 134/407 (32.92%), Postives = 187/407 (45.95%), Query Frame = 2 Query: 3185 RVYLPKLAHLGSHNSYPMPHVTTPGTEMSGVICQRSTPADVYALKDASSPTTYPQSQLDVHELLFEAGRKHGRTGELSSSAAMRGLSTLHTE--GYRILSLFEILVFTYRWHLQLAQDGYKHMLLAPEGWRVLGIDSTGGSPPGSGVPRSDATPDISRTPAAVDQTEFFYIHVDQAIDFLEELLVVAVGPRAEIVPHLPSLDYSNASPGCILGLDTLEGFPVR*TG-FELTRRPNKNSWSSVFSLEDKIRRDEQVKSFPRLQFAESLGYSGRKAVHPEIL-GAGVGCSRAISSIRTQQIGLNPGVVPHESADENYKVGGYDDVVFHDTVNDGYLRIIPDGSRRPHPYTGLACGTFLGPDGPHESNHSQVCSSHYAGLSTCTEIAGVNLNPHEQNHSRKGIYLRSLNS 4393 RV+ P LAHLGS+++ V P + V +R + DVYAL +A++ QSQ++V++LL + G + AA R ++ L G R+LSLF+ LVFTY W +A+D + + GW L + S G P G+ DA + A L E+L+VA G R N C+L GF T T+ +++++ + K D + +G RK I G G+ C + SI QI L V PHESA EN+KV GYD V+ D D D S Y G F+GPDGPH N S+ C Y+G +TC E+AG+NLNP EQ+HS+K +YLRSLN+ Sbjct: 50 RVFSPALAHLGSNSASTS--VEAPQVSIH-VPPKRYSKVDVYAL-NAAAQGDRGQSQVNVYDLLHASDETQGPVPKAVYLAATRAVAALRDREAGIRVLSLFKALVFTYVWLRNIAEDEPGMLEIGATGW-TLRMPSHGVVPVGTIAESVDA------------------VSTGDAEKHLREVLLVARGTR-------------NGKGACLLDWLNAGGFVDGDTSTLNATQVDGLHAYAAA---KTKFMADG----------VQPIGEKERKIAESAICCGTGL-CGDGVYSIMALQIALAVDVPPHESA-ENFKVAGYD-CVWQDNTFD-------DMSSEHVKYKMWQSGIFVGPDGPHAKNRSKECQRQYSGFTTCDELAGINLNPPEQDHSKKALYLRSLNT 397
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Match: A0A6H5JGH9_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGH9_9PHAE) HSP 1 Score: 130 bits (327), Expect = 2.010e-27 Identity = 123/413 (29.78%), Postives = 171/413 (41.40%), Query Frame = 2 Query: 2669 CSFCGGSL--RSLKTIRGRLLRQGPELFHVEVTPSFCDSCEAVA*ASDNWRSTQVFNYNNHILVDLRLLYSCREAFIRGMPVTRFFDSVLVQLRYKQGWAARHPQLAKR-----SPLVFSSTIRRANFGHTSRASKKCCWRTTASCPVFRH-----LHLKFQV--SRTRRRPTLQTLLLAAMWQR-------------------------------------RRVYLPKLAHLGSHNS---YPMPHVTTPGTEMSGVICQRSTPADVYALKDASSPTTYPQSQLDVHELLFEAGRKHGRTGELSSSAAMRGLSTLHTEGYRILSLFEILVFTYRWHLQLAQDGYKHMLLAPEGWRVLGIDSTGGSPPGSGVPRSDATPDISRTPAAVDQTEFFYIHVDQAIDFLEELLVVAVG 3745 CS CG + T+ L +GP + V V + C++C AS+NWR T +FNYNN LV+L +LY C EAF RG ++ FF++ L L W +P L+ R + L + I A + CW P+ + F RT+RR T+ A W+ RV+ P LAHLGSH+S P V+ P V +R + DVYALK A+ QSQ++V++LL + G + + AA R ++ L G R+LSLFE+L+FTY W +A+D + L GW L S G P G+ DA I A L E+LVVA G Sbjct: 179 CSGCGRDFPAENQHTVVATRLTEGPGMSKVNVHTNECETCGIHGLASENWRETGLFNYNNSYLVELSILYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSNRLANGTNLLNVLNNIFLAFLALIDHTFEFRCWMWVKFPPILTFDACMKIACNFVTLGQRTKRRFLGCTMPDAKRWRTWKNTSRGSFKTAGDPLGLATPGGGASIDTEDGEPAPTPRVFFPALAHLGSHSSSTTVEAPQVSVP------VPPKRDSKVDVYALKAAAQGDRV-QSQVNVYDLLHASAETQGPVPKAVNLAATRAVAGLREAGVRVLSLFEVLIFTYVWLRNIAEDEPGMLELGATGW-TLRRPSHGVLPVGTTAESVDA------------------ISTGDAEKHLREVLVVARG 565
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Match: A0A6H5KCW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW5_9PHAE) HSP 1 Score: 128 bits (321), Expect = 4.030e-27 Identity = 128/412 (31.07%), Postives = 179/412 (43.45%), Query Frame = 2 Query: 3185 RVYLPKLAHLGSHNS---YPMPHVTTPGTEMSGVICQRSTPADVYALKDASSPTTYPQSQLDVHELLFEAGRKHGRTGELSSSAAMRGLSTLHTEGYRILSLFEILVFTYRWHLQLAQDGYKHMLLAPEGWRVLGIDSTGGSPPGSGVPRSDATPDISRTPAAVDQTEFFYIHVDQAIDFLEELLVVAVGPRAEIVPHLPSL----DY--SNASPGCILGLDTLEGFPVR*TGFELTRRPNKNSWSSVFSLEDKIRRDEQVKSFPRLQFAESLGYSGRKAVHPEILGAGVGCSRAISSIRTQQIGLNPGVVPHESADENYKVGGYDDVVFHDTVNDGYLRIIPDGSRRPHPYTGLACGTFLGPDGPHESNHSQVCSSHYAGLSTCTEIAGVNLNPHEQNHSRKGIYLRSLNS 4393 RV+LP LAHLGS+ + P V+ P V +R + DVYALK A+ QSQ++V++LL + G + + AA R ++ L G R+ SL E+L+FTY W +A+D + + GW L S G P G+ DA + A L E+LVVA G R LP D+ + S C +D L + T F + V + +K R AES + G+GC + SI QI L V P ESA +N++V GYD V+HDT D D S Y G H + + S+ +G +TC E+AG+NLNPHEQ+HS+K + LRSLN+ Sbjct: 67 RVFLPALAHLGSNGASTTVEAPQVSLP------VPPKRDSKVDVYALKAAAQGDRV-QSQVNVYDLLHASAETQGPVPKAVNLAATRAVAALGKAGIRVNSLLEVLIFTYVWLRNIAEDEPGMLEVGATGW-TLRRPSHGVVPVGTTAESVDA------------------VSTSDAEKHLLEVLVVARGARNGKGACLPDWFGAGDFVDGDTSTLCATQVDGLHAYAAAKTKFIV---------DGVQPIGEKER-----------NIAESA------------IRCGIGCGDGMHSIMVLQIALAVDVPPRESA-KNFEVAGYD-CVWHDTTFD-------DKSSEHAKYKMWQSGILWAQT--HLTRRTTARSASNSGFTTCDELAGINLNPHEQDHSKKALCLRSLNT 409
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Match: A0A6H5KPQ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPQ6_9PHAE) HSP 1 Score: 119 bits (299), Expect = 1.630e-26 Identity = 63/124 (50.81%), Postives = 78/124 (62.90%), Query Frame = 2 Query: 4022 GVGCSRAISSIRTQQIGLNPGVVPHESADENYKVGGYDDVVFHDTVNDGYLRIIPDGSRRPHPYTGLACGTFLGPDGPHESNHSQVCSSHYAGLSTCTEIAGVNLNPHEQNHSRKGIYLRSLNS 4393 G+G + SI QI L V PHESA +N+KV GYD V+HDT D D S Y G F+GPDGPHE NHS+ C Y+G +TC E+AG+NLNPHEQ+HS+K +YLRSLN+ Sbjct: 29 GIGGGDGVHSIMALQIALAVDVPPHESA-KNFKVAGYD-CVWHDTTFD-------DKSSEHAKYKMWQSGMFVGPDGPHEKNHSKECQRQYSGFTTCDELAGINLNPHEQDHSKKALYLRSLNT 143
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Match: A0A6H5KGV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV9_9PHAE) HSP 1 Score: 122 bits (305), Expect = 2.160e-26 Identity = 67/142 (47.18%), Postives = 84/142 (59.15%), Query Frame = 2 Query: 3968 ESLGYSGRKAVHPEILGAGVGCSRAISSIRTQQIGLNPGVVPHESADENYKVGGYDDVVFHDTVNDGYLRIIPDGSRRPHPYTGLACGTFLGPDGPHESNHSQVCSSHYAGLSTCTEIAGVNLNPHEQNHSRKGIYLRSLNS 4393 + +G RK I G+GC + SI QI L V PHESA +N+KV GYD V+HDT D D S Y G F+GPDGPHE NHS+ C Y+G +TC E+AG+NLNPHEQ+HS+K + LRSLN+ Sbjct: 99 QPIGEKERKIAESAIR-CGIGCGDGVHSIMALQIALAVDVPPHESA-KNFKVAGYD-CVWHDTTFD-------DKSSEHAKYKMWQSGMFVGPDGPHEKNHSKECQRQYSGFTTCDELAGINLNPHEQDHSKKALCLRSLNT 230
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Match: A0A6H5JKP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKP5_9PHAE) HSP 1 Score: 105 bits (262), Expect = 4.300e-22 Identity = 61/140 (43.57%), Postives = 78/140 (55.71%), Query Frame = 2 Query: 3974 LGYSGRKAVHPEILGAGVGCSRAISSIRTQQIGLNPGVVPHESADENYKVGGYDDVVFHDTVNDGYLRIIPDGSRRPHPYTGLACGTFLGPDGPHESNHSQVCSSHYAGLSTCTEIAGVNLNPHEQNHSRKGIYLRSLNS 4393 +G RK I G+GC + SI QI L PHESA EN+KV YD V+HDT D S Y G F+GPD PHE NHS+ C Y+G +TC E+AG+NL+PHEQ+ S+K + LRSL++ Sbjct: 8 IGEKERKIAESAIR-CGIGCGDGVYSIMALQIALAVDTPPHESA-ENFKVAWYD-CVWHDTTFD-------KKSSEHAKYKMWQSGMFVGPDEPHEKNHSKECQRQYSGFTTCDELAGINLDPHEQDRSKKALCLRSLHT 137
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Match: A0A6H5JGB2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB2_9PHAE) HSP 1 Score: 112 bits (279), Expect = 8.560e-22 Identity = 105/362 (29.01%), Postives = 151/362 (41.71%), Query Frame = 2 Query: 2669 CSFCGGSL--RSLKTIRGRLLRQGPELFHVEVTPSFCDSCEAVA*ASDNWRSTQVFNYNNHILVDLRLLYSCREAFIRGMPVTRFFDSVLVQLRYKQGWAARHPQLAKRSP-------------LVFSSTIRRA------NFGHTSRASKKCCWRTTAS-----------------CPVFRHLHLKFQ-VSRTRRRPTL----------QTLLLAAMWQRR--------RVYLPKLAHLGSHNS---YPMPHVTTPGTEMSGVICQRSTPADVYALKDASSPTTYPQSQLDVHELLFEAGRKHGRTGELSSSAAMRGLSTLHTEGYRILSLFEILVFTYRWHLQLAQDGYKHMLLAPEGWRV 3574 CS CG + T+ L +GP + + V + C++ ASDNWR T +FNYN LV+L +L C EAF RG ++ F ++ L L W +P L+KR L F + I A +G R+S C S C H+ V + R RPT AA R++L LAHLGS+++ P V+ P V +R + DVYALK A+ Q+Q++V++LL + G E + AA R ++ L G R+LS FE+LVFTY W +A+D + L GW + Sbjct: 83 CSGCGRDFPTENQHTVVATRLTEGPGMSKMNVHENECETSAIHGLASDNWRETGLFNYNKSYLVELFILCRCLEAFTRGTTLSAFVETFLEPLASDLVWIKANPDLSKRLANGTNLLNVLNNIFLAFLALIDHAFEFRCWMWGSFRRSSLYACMTIACSLVTLGQQTPVLGMYDAGCKAVAHMEKHLPGVLQNRGRPTRLGDDGVGGGGSGYSNAASNDTEDGEPAPTPRIFLQALAHLGSNSASTTVEAPQVSLP------VPPKRDSKVDVYALKAAAQGDRV-QNQVNVYDLLHASAETQGPVPEAVNLAATRAVAALREAGIRVLSFFEVLVFTYVWLRNIAEDEPGMLELGATGWTL 437
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Match: A0A6H5JJH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH8_9PHAE) HSP 1 Score: 100 bits (249), Expect = 6.180e-20 Identity = 56/110 (50.91%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 4064 QIGLNPGVVPHESADENYKVGGYDDVVFHDTVNDGYLRIIPDGSRRPHPYTGLACGTFLGPDGPHESNHSQVCSSHYAGLSTCTEIAGVNLNPHEQNHSRKGIYLRSLNS 4393 QI L V PHESA EN+KV GYD V+HDT D D S Y G F+GPDGPHE N S+ C Y+G +T E+AG+NL HEQ HSRK +YL+SLN+ Sbjct: 18 QIALAVDVPPHESA-ENFKVVGYD-YVWHDTTFD-------DKSSEHAKYEMWQSGMFVGPDGPHEKNDSKECQRQYSGFTTWDELAGINLKSHEQGHSRKALYLQSLNT 118
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Match: A0A6H5L0Y4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y4_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 1.350e-16 Identity = 78/247 (31.58%), Postives = 108/247 (43.72%), Query Frame = 2 Query: 2261 KATRGYPCAEKRVGRPKYVHTQIVAAATWASTGRGKDWVEGTRSPLDAEKVGAEEEVLDEIGTEVPENPEIVSTRHTAGHMVSDRGT--KSGTALSYATPSTSRPCTSSPHVSPVAYRQRVSKNQKKAG*SLGRRKKKCSFCGGSL--RSLKTIRGRLLRQGPELFHVEVTPSFCDSCEAVA*ASDNWRSTQVFNYNNHILVDLRLLYSCREAFIRGMPVTRFFDSVLVQLRYKQGWAARHPQLAKR 2989 +A RG PC+E K +HT +VA A W EG R E +G + +D G P+ T TA M+ + G A T S + P P +R + A + +K CS CG + T+ L +GP + V V + C++C ASDNWR T +FNYNN LV+L +LY C EAF RG + FF++ L L W +P L+KR Sbjct: 10 QANRGGPCSEYEKKNRKCLHTLVVALALWHE--------EGMRD----EGLGVGQ--VDVDGDRTPDG-----TPRTAQKMLDKDAPAYRKGLANCLNTMSVYK----FPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFPTENQHTVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSVLYRCLEAFTRGTTIGAFFETFLEPLGSDLVWIKANPDLSKR 233
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Match: A0A6H5JWX4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX4_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 5.530e-16 Identity = 79/247 (31.98%), Postives = 110/247 (44.53%), Query Frame = 2 Query: 2261 KATRGYPCAEKRVGRPKYVHTQIVAAATWASTGRGKDWVEGTRSPLDAEKVGAEEEVLDEIGTEVPENPEIVSTRHTAGHMVSDRGT--KSGTALSYATPSTSRPCTSSPHVSPVAYRQRVSKNQKKAG*SLGRRKKKCSFCGGSLRSLK--TIRGRLLRQGPELFHVEVTPSFCDSCEAVA*ASDNWRSTQVFNYNNHILVDLRLLYSCREAFIRGMPVTRFFDSVLVQLRYKQGWAARHPQLAKR 2989 KA RG PC+E K +HT +VA A W EG R E +G + +D G +P+ T TA M+ + G A T S + P P +R + A + +K CS CG + T+ L +GP + V V + C++C ASDNWR T +FNYNN LV+L +LY C EAF RG ++ FF++ L L W +P L+KR Sbjct: 135 KANRGGPCSEYEKKDRKCLHTLVVALALWQE--------EGMRD----EGLGVGQVDMD--GGRIPDG-----TPRTAQKMLDKDAPAYRKGLANCLNTMSVYK----FPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFHTENQHTVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVELSVLYRCLEAFTRGTTISAFFETFLEPLASDLVWIKANPDLSKR 358 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1024.298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1024.298.1 >prot_D-dichotoma_M_contig1024.298.1 ID=prot_D-dichotoma_M_contig1024.298.1|Name=mRNA_D-dichotoma_M_contig1024.298.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=317bp MPVTRFFDSVLVQLRYKQGWAARHPQLAKRSPLVFSSTIRRANFGHTSRAback to top mRNA from alignment at D-dichotoma_M_contig1024:35153..43714+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1024.298.1 ID=mRNA_D-dichotoma_M_contig1024.298.1|Name=mRNA_D-dichotoma_M_contig1024.298.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=8562bp|location=Sequence derived from alignment at D-dichotoma_M_contig1024:35153..43714+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1024:35153..43714+ >mRNA_D-dichotoma_M_contig1024.298.1 ID=mRNA_D-dichotoma_M_contig1024.298.1|Name=mRNA_D-dichotoma_M_contig1024.298.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1902bp|location=Sequence derived from alignment at D-dichotoma_M_contig1024:35153..43714+ (Dictyota dichotoma ODC1387m male)back to top |