mRNA_D-dichotoma_M_contig102.271.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Match: A0A6H5KWM4_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWM4_9PHAE) HSP 1 Score: 243 bits (620), Expect = 4.880e-79 Identity = 116/135 (85.93%), Postives = 128/135 (94.81%), Query Frame = 2 Query: 275 MTKEPQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVANKHRGFGFVEFEEEEDARAAVENMDGAELYGKVLRVNMARPIKHKLGAHTAVWSADDWYKNTLVEGDDSAKLAEDEMEPAENLDPVASN 679 MTKE QPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVN+PKDHVAN HRGFGFVEFE EEDA+AA++NMDGAELYGKVLRVN A+P+KHKLGAHTAVWSADDWYKNTLVEGDD+AKLA DE+EPA++L+P S+ Sbjct: 1 MTKEAQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNLPKDHVANTHRGFGFVEFELEEDAKAAIDNMDGAELYGKVLRVNAAKPMKHKLGAHTAVWSADDWYKNTLVEGDDTAKLAGDELEPADSLEPTVSD 135
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Match: A0A835Z2R3_9STRA (Peptidyl-prolyl cis-trans isomerase E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2R3_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.860e-49 Identity = 80/129 (62.02%), Postives = 105/129 (81.40%), Query Frame = 2 Query: 293 PKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVANKHRGFGFVEFEEEEDARAAVENMDGAELYGKVLRVNMARPIKHKLGAHTAVWSADDWYKNTLVEGDDSAKLAEDEMEPAENLDPVASN 679 P+ +YVGGLEE VNEE+LHAAF+PFGD+VEV IP++ + +RGFGFVE+E EEDA AA+ENMDGAEL G+VLRVN A+P+KHKLGA AVWSAD+W+KN + EGD++ + D+M + L+PVA++ Sbjct: 7 PRCTLYVGGLEENVNEELLHAAFIPFGDLVEVQIPREWKSGTNRGFGFVEYEAEEDASAAMENMDGAELAGRVLRVNRAKPLKHKLGAARAVWSADEWFKN-MAEGDETINMTADDMPQPDALEPVAAS 134
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Match: A0A7S2V6A5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6A5_9STRA) HSP 1 Score: 162 bits (410), Expect = 3.120e-47 Identity = 76/130 (58.46%), Postives = 107/130 (82.31%), Query Frame = 2 Query: 281 KEPQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVANKHRGFGFVEFEEEEDARAAVENMDGAELYGKVLRVNMARPIKHKLGAHTAVWSADDWYKNTLVEGDDSAKLAEDEMEPAENLDPV 670 ++P K+ VYVGGL+E+V EE+LHAAF+PFGDIVEVNIP+D + +RGFGFV+FE+E+DA AA+ENMDGAEL+G+VLR N+ARPIKH+LGA VWSA+DW+++ + +G+ E+ ++PA++L P+ Sbjct: 8 EKPNKKKVVYVGGLDEKVVEEVLHAAFIPFGDIVEVNIPRDFQKDLNRGFGFVDFEDEKDASAAIENMDGAELFGRVLRCNLARPIKHRLGASKPVWSAEDWFQSNVKDGE----ADEENIDPADSLIPL 133
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Match: A0A7S2H1G4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H1G4_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.680e-43 Identity = 71/114 (62.28%), Postives = 91/114 (79.82%), Query Frame = 2 Query: 296 KRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVANKHRGFGFVEFEEEEDARAAVENMDGAELYGKVLRVNMARPIKHKLGAHTAVWSADDWYKNTLVEGDDSAKLAED 637 KR++YVGGLEE+ EE+LHAAF+PFG++VEV IPKD NK+RGFGFVEF+ + DA A++NMDG+EL G+VLRVN+A+PI HKLGA AVWS+D+W+K L E D A +D Sbjct: 8 KRSLYVGGLEEEATEELLHAAFIPFGNVVEVQIPKDFKDNKNRGFGFVEFDNDADAAEAMDNMDGSELLGRVLRVNIAKPITHKLGASKAVWSSDEWFKQNLKEDQDLADAQDD 121
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Match: I2CRH6_NANGC (RRM domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRH6_NANGC) HSP 1 Score: 151 bits (381), Expect = 7.630e-43 Identity = 73/117 (62.39%), Postives = 91/117 (77.78%), Query Frame = 2 Query: 275 MTKEPQPKRN---VYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVANKHRGFGFVEFEEEEDARAAVENMDGAELYGKVLRVNMARPIKHKLGAHTAVWSADDWYKNTLVEGDD 616 M +P+PK + VYVGGL+EQ EE+LHAAF+PFGDIVEVNIPKD N RGFGFV FE EDA AA++NM+GAEL G+VL+ N+ARP++HKLGA+ VWS D+W+K+ L E D Sbjct: 1 MDPKPKPKADKSIVYVGGLDEQCTEEMLHAAFIPFGDIVEVNIPKDFKENTTRGFGFVHFESAEDAAAAIDNMEGAELLGRVLKCNVARPMQHKLGANKPVWSTDEWFKSQLAEDKD 117
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Match: A0A7S2C0W9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0W9_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.830e-41 Identity = 74/137 (54.01%), Postives = 98/137 (71.53%), Query Frame = 2 Query: 296 KRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVANKHRGFGFVEFEEEEDARAAVENMDGAELYGKVLRVNMARPIKHKLGAHTAVWSADDWYKNTLVEGDDSAKLAEDEMEPAENLDPVASN*FLVCRESG 706 KR +YVGGLEEQV+EE+LHAAF+PFG+I EV IPKD N +RGFGF+E+ +EDA A++NMDGAEL G+VLRVN+A+P+K KLGA VWS ++W +N+L E A ED A++L P+ L ++ G Sbjct: 15 KRTLYVGGLEEQVDEELLHAAFIPFGNINEVQIPKDFKENTNRGFGFIEYTNDEDAAEAMDNMDGAELLGRVLRVNVAKPMKAKLGASKPVWSTEEWLQNSLKEDQALADAQED----ADDLTPMEDPAVLAAKQKG 147
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Match: A0A812XSP9_SYMMI (PPIE protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XSP9_SYMMI) HSP 1 Score: 139 bits (349), Expect = 2.480e-38 Identity = 68/103 (66.02%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 305 VYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVANKHRGFGFVEFEEEEDARAAVENMDGAELYGKVLRVNMARPIKHKLGAHTAVWSADDWYKNTLVEGD 613 VYVGGL+ VNEE LHAAF+PFGDI EVNIPKD NKHRGFGFV+FE+ EDA AA+ENM+GAEL+GKVL+ NMA+P+ KL AVW+A++W N+L D Sbjct: 1 VYVGGLDSGVNEETLHAAFIPFGDIREVNIPKDFAENKHRGFGFVDFEDAEDAAAAIENMNGAELFGKVLKCNMAKPMT-KLQPGQAVWTAEEWLSNSLKTDD 102
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Match: A0A397TW91_9GLOM (RRM domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397TW91_9GLOM) HSP 1 Score: 136 bits (343), Expect = 8.460e-37 Identity = 64/115 (55.65%), Postives = 89/115 (77.39%), Query Frame = 2 Query: 275 MTKEPQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVA-NKHRGFGFVEFEEEEDARAAVENMDGAELYGKVLRVNMARPIKHKLGAHTAVWSADDWYKNTLVEGDD 616 + K+ K +YVGGL++QVNE+ILHAAF+PFGDIVE+ IP D + N+HRGFGF+EFEE DA+AA++NM+ +ELYGKV++VN+ARP++ K G+ AVWS D W + ++ D Sbjct: 4 LVKDNTSKTTIYVGGLDDQVNEQILHAAFIPFGDIVEIQIPPDPASHNQHRGFGFIEFEEAADAQAAIDNMNLSELYGKVIKVNLARPMRIKEGSMRAVWSEDAWLQKYALQSAD 118
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Match: A0A5J4Y598_9CHLO (Peptidyl-prolyl cis-trans isomerase E-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y598_9CHLO) HSP 1 Score: 136 bits (342), Expect = 1.470e-36 Identity = 67/114 (58.77%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 281 KEPQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVANKHRGFGFVEFEEEEDARAAVENMDGAELYGKVLRVNMARPIKHKLG----AHTAVWS-ADDWYKNTLVE 607 K PK +YVGGLEE VNE ILH+AF+PFGDI +VNIP DH KHRGFGF+E+E ++DA A++NM AELYG+VLR N A+P+K K G +H AVW+ ADDWY+ E Sbjct: 16 KGTNPKTTLYVGGLEENVNEAILHSAFIPFGDIKDVNIPLDHATGKHRGFGFIEYEAKDDAADAIDNMHNAELYGRVLRTNYAQPMKIKGGDKGFSHQAVWADADDWYERAEAE 129
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Match: A0A397G7Y2_9GLOM (RRM domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G7Y2_9GLOM) HSP 1 Score: 135 bits (339), Expect = 1.500e-36 Identity = 69/127 (54.33%), Postives = 94/127 (74.02%), Query Frame = 2 Query: 281 KEPQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVA-NKHRGFGFVEFEEEEDARAAVENMDGAELYGKVLRVNMARPIKHKLGAHTAVWSADDWYKNTLVEGDDSAKLAEDEMEPAEN 658 K+ K +YVGGL++QVNE+ILHAAFVPFGDIVE+ IP D + N+HRGFGF+EFEE DA+ A++NM+ +ELYGKV++VN+ARP++ K G+ AVWS D W + ++ D K++ DE E N Sbjct: 6 KDNPNKTTIYVGGLDDQVNEKILHAAFVPFGDIVEIQIPPDPASHNQHRGFGFIEFEEAADAQEAIDNMNLSELYGKVIKVNLARPMRIKEGSVRAVWSEDAWLQKYALKSADP-KVSYDEYEKETN 131 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig102.271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig102.271.1 >prot_D-dichotoma_M_contig102.271.1 ID=prot_D-dichotoma_M_contig102.271.1|Name=mRNA_D-dichotoma_M_contig102.271.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=136bp MTKEPQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNIPKDHVANKHRback to top mRNA from alignment at D-dichotoma_M_contig102:545574..548735- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig102.271.1 ID=mRNA_D-dichotoma_M_contig102.271.1|Name=mRNA_D-dichotoma_M_contig102.271.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=3162bp|location=Sequence derived from alignment at D-dichotoma_M_contig102:545574..548735- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig102:545574..548735- >mRNA_D-dichotoma_M_contig102.271.1 ID=mRNA_D-dichotoma_M_contig102.271.1|Name=mRNA_D-dichotoma_M_contig102.271.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=816bp|location=Sequence derived from alignment at D-dichotoma_M_contig102:545574..548735- (Dictyota dichotoma ODC1387m male)back to top |