mRNA_D-dichotoma_M_contig1019.244.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI) HSP 1 Score: 169 bits (429), Expect = 2.640e-44 Identity = 106/249 (42.57%), Postives = 144/249 (57.83%), Query Frame = 3 Query: 237 MAHSWTRG-------EDGFPIPEGPFKPKENGRGREGPGNLCEVPTAEFRWQAKHAEGDYHAAMTDKMFMDWIKMRIGSVFKKKFDEDKKMILVLENASYHHGYNEEVKVPESNSKTYNTSLLRNHGVKRIRVER---TGNNCQSRPVITTHNFEVPE-------NPERVFLVRNPRVVMASARRKWLWRLGHTFKFTIPRSSLKRSRHT*RRRDWSPYGLHLIC*RFNPLS*LFWQNGKQYVSLCYET 932 M H+ T+G E+ FPIPEG FKPK+ G+GR+G G++ TAE WQAK A GDYH AMTDKMFM+W++ R+ FK K+ +KKMILVL+NASYHHGY+ EV VPESNSK YNT+LLR + ++I VER + +S+ + F+VP N + V P V +A+ + ++L H P +++ R W F P+ LFWQ+GKQYVS ++T Sbjct: 309 MVHAITKGGALAAVDENNFPIPEGWFKPKDKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMTDKMFMEWLERRLAPAFKAKYG-NKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTSSAGVRSKK----YTFQVPATGTFPQANSKCGKGVSGPEVALAT---RAFFQLKH------PTKLMEKVETFMNGRGWQLIWTPPYMPSFQPIE-LFWQHGKQYVSFNFKT 542
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 157 bits (398), Expect = 6.870e-40 Identity = 98/228 (42.98%), Postives = 131/228 (57.46%), Query Frame = 3 Query: 264 DGFPIPEGPFKPKENGRGREGPGNLCEVPTAEFRWQAKHAEGDYHAAMTDKMFMDWIKMRIGSVFKKKFD-EDKKMILVLENASYHHGYNEEVKVPESNSKTYNTSLLRNHGVKRIRVERTGNNCQSRPVITTHNFEVPENPERVFLVRN-----PRVVMASARRKWLWRLGHTFKFTIPRSSLKRSRHT*RRRDWSPYGLHLIC*RFNPLS*LFWQNGKQYVSLCYE 929 DGFPI EG FK E G G++ + + TAEF WQAK A+GDYHAAMTD MFM+W++ R+ + + E KKMILVL+NASYHHG++ EVKVPE+N+K +N LLR G K IRV+R + HNFEVP P F N R +A+A R+++ + P +R +++ W+ F P+ LFWQ+GKQYVSL +E Sbjct: 360 DGFPIEEGWFK--ETGSGKK---KMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRK----EGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYI-------RLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIE-LFWQHGKQYVSLNFE 570
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Match: A0A6H5KF49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF49_9PHAE) HSP 1 Score: 151 bits (382), Expect = 2.890e-38 Identity = 118/320 (36.88%), Postives = 150/320 (46.88%), Query Frame = 2 Query: 11 RKARIRRFLIEMNDALTQEDEDRVIIVYMDESFVHQLHASAYSYFQRDNKGVVHDGFGRT*GKGQRMIMVHTITKYGPLVDPWRRRIPHSRGSIQAKRKWSGAGRSRKPL*GSYGGIPVAS---KAR*GGLSRRHDRQDVHGLDQNAHRISI*EKVRRGQKDDPSARKRIIPPWLQRRSQGS*V*QQDVQHKP--LAEPWCEAHQGGADGQQLPES-----------------------AGNHDA*LRGTREP---GESFPRAKSTCGYGVSKEEVALATRTYFQVHHPEKLLEKVEAYVKEKGLESIWTPPYMLTFQPI 877 R ARIRRFL+EM+ A ED +IVYMDESFVHQ H S YSYF D GVV DG GRT GKG RMIMVH ITK+GPL G P+ K++ GG +R + D + D+ K+ +G + + WL+RR + D + K L HQG ++PE+ A N + P G + P A+ G VS+EEVA ATR YF+++HPEKL E+VE +++EKG E IWTPPYM TFQPI Sbjct: 248 RLARIRRFLVEMDIAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK-------------------------------LCDGFPIEEGWFKSKGGGKGKRGGK-DFNLEDEETAEFLWQAKLAKGDYH-AAMTDSMFMEWLERRLSPAYNAVPDFKGKKMILVRDNASYHQGFDAEVKVPETNTKKYNVELLRRYGVRSIKVKRAAANGRVVQQRFEVPTDEGSTLPDARREGG--VSREEVATATREYFRLNHPEKLEERVETFMREKGWELIWTPPYMPTFQPI 532
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE) HSP 1 Score: 150 bits (380), Expect = 3.910e-38 Identity = 98/234 (41.88%), Postives = 127/234 (54.27%), Query Frame = 3 Query: 261 EDGFPIPEGPFKPKENGRGREGPGN----LCEVPTAEFRWQAKHAEGDYHAAMTDKMFMDWIKMRIGSVFKKKFDEDKKMILVLENASYHHGYNEEVKVPESNSKTYNTSLLRNHGVKRIRVERTGNNCQSRPVITTHNFEVPE-----NPERVFLVRNPRVVMASARRKWLWRLGHTFKFTIPRSSLKRSRHT*RRRDWSPYGLHLIC*RFNPLS*LFWQNGKQYVSLCYETG 935 ++GFPI EG FK KEN + PG + + TAEF WQAK A GDYH AMTD MFM W+K R+ F +F ++KKM LVL+NASYHH ++EEVKVPE+NSK YN LLR +G +V R +S +NFEVP N R V + AS R + FK P+ +++ R + W F P+ LFWQ+GK YVS+ +E G Sbjct: 247 QEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQF-KNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR-----ESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEI--ASVTRTY-------FKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIE-LFWQHGKHYVSIHFEKG 464
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 150 bits (380), Expect = 4.550e-38 Identity = 98/234 (41.88%), Postives = 127/234 (54.27%), Query Frame = 3 Query: 261 EDGFPIPEGPFKPKENGRGREGPGN----LCEVPTAEFRWQAKHAEGDYHAAMTDKMFMDWIKMRIGSVFKKKFDEDKKMILVLENASYHHGYNEEVKVPESNSKTYNTSLLRNHGVKRIRVERTGNNCQSRPVITTHNFEVPE-----NPERVFLVRNPRVVMASARRKWLWRLGHTFKFTIPRSSLKRSRHT*RRRDWSPYGLHLIC*RFNPLS*LFWQNGKQYVSLCYETG 935 ++GFPI EG FK KEN + PG + + TAEF WQAK A GDYH AMTD MFM W+K R+ F +F ++KKM LVL+NASYHH ++EEVKVPE+NSK YN LLR +G +V R +S +NFEVP N R V + AS R + FK P+ +++ R + W F P+ LFWQ+GK YVS+ +E G Sbjct: 203 QEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQF-KNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR-----ESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEI--ASVTRTY-------FKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIE-LFWQHGKHYVSIHFEKG 420
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Match: A0A6H5KUM1_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM1_9PHAE) HSP 1 Score: 146 bits (369), Expect = 6.160e-38 Identity = 100/243 (41.15%), Postives = 134/243 (55.14%), Query Frame = 3 Query: 237 MAHSWTRGE------DGFPIPEGPFKPKENGRGREGPGNLCEVPTAEFRWQAKHAEGDYHAAMTDKMFMDWIKMRIGSVFKKKFD-EDKKMILVLENASYHHGYNEEVKVPESNSKTYNTSLLRNHGVKRIRVERTGNNCQSRPVITTHNFEVPENPERVFLVRN-----PRVVMASARRKWLWRLGHTFKFTIPRSSLKRSRHT*RRRDWSPYGLHLIC*RFNPLS*LFWQNGKQYVSLCYE 929 M H+ T+ E DG PI EG FK E G G + + + TAEF WQAK A+GDYHAAMTD MFM+W++ R+ + + + ++MILVL+NASYHHG++ EVKVPE+N+K +N LLR G K IRV R +NFEVP P F N R +A+A R+++ L H P +R R++ W+ F P+ LFWQ+GKQYVSL +E Sbjct: 94 MVHAITKWEPLAKFCDGLPIEEGWFK--ETGSGTK---EMKDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGRQMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQG------VYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYI-HLNH------PERLEERVVTFMRKKGWALIWTPPYMPSFQPIE-LFWQHGKQYVSLNFE 317
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 149 bits (377), Expect = 7.050e-38 Identity = 97/228 (42.54%), Postives = 130/228 (57.02%), Query Frame = 3 Query: 264 DGFPIPEGPFKPKENGRGREGPGNLCEVPTAEFRWQAKHAEGDYHAAMTDKMFMDWIKMRIGSVFKKKFD-EDKKMILVLENASYHHGYNEEVKVPESNSKTYNTSLLRNHGVKRIRVERTGNNCQSRPVITTHNFEVPENPERVFLVRN-----PRVVMASARRKWLWRLGHTFKFTIPRSSLKRSRHT*RRRDWSPYGLHLIC*RFNPLS*LFWQNGKQYVSLCYE 929 DG PI EG FK E G G++ + + TAEF WQAK A+GDYHAAMTD MFM+W++ R+ + + + K+MILVL+NASYHHG++ EVKVPESN+K +N LLR G K IRV R + + +N EVP P F N R +A+A R+++ L H P +R R++ W+ F P+ LFWQ+GKQYVSL +E Sbjct: 209 DGLPIEEGWFK--ETGSGKK---EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRK----EGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYI-HLNH------PERLEERVVTFMRKKGWALIWTPPYMPSFQPIE-LFWQHGKQYVSLKFE 419
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 150 bits (380), Expect = 1.650e-37 Identity = 97/228 (42.54%), Postives = 131/228 (57.46%), Query Frame = 3 Query: 264 DGFPIPEGPFKPKENGRGREGPGNLCEVPTAEFRWQAKHAEGDYHAAMTDKMFMDWIKMRIGSVFKKKFD-EDKKMILVLENASYHHGYNEEVKVPESNSKTYNTSLLRNHGVKRIRVERTGNNCQSRPVITTHNFEVPENPERVFLVRN-----PRVVMASARRKWLWRLGHTFKFTIPRSSLKRSRHT*RRRDWSPYGLHLIC*RFNPLS*LFWQNGKQYVSLCYE 929 DG PI EG FK E G G++ + + TAEF WQAK A+GDYHAAMTD MFM+W++ R+ + + + K+MILVL+NASYHHG++ EVKVPE+N+K +N LLR G K IRV R + + +NFEVP P F N R +A+A R+++ L H P +R R++ W+ F P+ LFWQ+GKQYVSL +E Sbjct: 326 DGLPIEEGWFK--ETGSGKK---EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRK----EGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYI-HLNH------PERLEERVVTFMRKKGWALIWTPPYMPSFQPIE-LFWQHGKQYVSLNFE 536
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE) HSP 1 Score: 146 bits (368), Expect = 1.840e-37 Identity = 96/228 (42.11%), Postives = 130/228 (57.02%), Query Frame = 3 Query: 264 DGFPIPEGPFKPKENGRGREGPGNLCEVPTAEFRWQAKHAEGDYHAAMTDKMFMDWIKMRIGSVFKKKFD-EDKKMILVLENASYHHGYNEEVKVPESNSKTYNTSLLRNHGVKRIRVERTGNNCQSRPVITTHNFEVPENPERVFLVRN-----PRVVMASARRKWLWRLGHTFKFTIPRSSLKRSRHT*RRRDWSPYGLHLIC*RFNPLS*LFWQNGKQYVSLCYE 929 DG PI EG FK E G G++ + + TAEF WQAK A+GDYHAAMTD MFM+W++ R+ + + + K+MILVL+NASYHHG++ +VK+PESN+K +N LLR G K IRV+R +NFEVP P F N R +A+A R+++ L H P +R R++ W+ F P+ LFWQ+GKQYVSL +E Sbjct: 56 DGLPIEEGWFK--ETGSGKK---EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVKRKEGEQG------VYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYI-HLNH------PERLEERVVTFMRKKGWALIWTPPYMPSFQPIE-LFWQHGKQYVSLNFE 264
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Match: A0A6H5LE74_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE74_9PHAE) HSP 1 Score: 148 bits (374), Expect = 1.900e-37 Identity = 97/234 (41.45%), Postives = 126/234 (53.85%), Query Frame = 3 Query: 261 EDGFPIPEGPFKPKENGRGREGPGN----LCEVPTAEFRWQAKHAEGDYHAAMTDKMFMDWIKMRIGSVFKKKFDEDKKMILVLENASYHHGYNEEVKVPESNSKTYNTSLLRNHGVKRIRVERTGNNCQSRPVITTHNFEVPE-----NPERVFLVRNPRVVMASARRKWLWRLGHTFKFTIPRSSLKRSRHT*RRRDWSPYGLHLIC*RFNPLS*LFWQNGKQYVSLCYETG 935 ++G PI EG FK KEN + PG + + TAEF WQAK A GDYH AMTD MFM W+K R+ F +F ++KKM LVL+NASYHH ++EEVKVPE+NSK YN LLR +G +V R +S +NFEVP N R V + AS R + FK P+ +++ R + W F P+ LFWQ+GK YVS+ +E G Sbjct: 165 QEGLPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQF-KNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR-----ESEGKAAEYNFEVPAQGSLPNANRKNGVSKEEI--ASVTRTY-------FKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIE-LFWQHGKHYVSIHFEKG 382 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1019.244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1019.244.1 >prot_D-dichotoma_M_contig1019.244.1 ID=prot_D-dichotoma_M_contig1019.244.1|Name=mRNA_D-dichotoma_M_contig1019.244.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=194bp MAHSWTRGEDGFPIPEGPFKPKENGRGREGPGNLCEVPTAEFRWQAKHAEback to top mRNA from alignment at D-dichotoma_M_contig1019:11984..12923+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1019.244.1 ID=mRNA_D-dichotoma_M_contig1019.244.1|Name=mRNA_D-dichotoma_M_contig1019.244.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=940bp|location=Sequence derived from alignment at D-dichotoma_M_contig1019:11984..12923+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1019:11984..12923+ >mRNA_D-dichotoma_M_contig1019.244.1 ID=mRNA_D-dichotoma_M_contig1019.244.1|Name=mRNA_D-dichotoma_M_contig1019.244.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1164bp|location=Sequence derived from alignment at D-dichotoma_M_contig1019:11984..12923+ (Dictyota dichotoma ODC1387m male)back to top |