mRNA_D-dichotoma_M_contig1016.225.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1016.225.1 vs. uniprot
Match: D7FUF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUF4_ECTSI) HSP 1 Score: 310 bits (794), Expect = 1.180e-99 Identity = 158/269 (58.74%), Postives = 195/269 (72.49%), Query Frame = 2 Query: 74 KEEQDFLQSDFPMYAAIGVLTFFLYRAFVSRAENTPVQPEWMTKGVFPAAFMTFVGSLACHEMLLDMAVYPGGLTAWMPGVVTVLVALWAAYRGQRAASGGEVGMASLAAVVAIATGAVFWLISEGEEPPQELTKGQMRKAAREAXXXXXXXXXXAAMGILDIPKPKPLFLEKGKDMVAEHLHMALAVLLLVMLALGVVNGPGVFPRNLSDGSFPACFMVVSGVMAYNSFLRQARAYEGGRIEDFFPAFGIMLAAALTAGWGYKLQTRA 880 + E DFL SDFPMYAA GV F +YRAFV+++ P+QP M+KGVFPAAF TFVGSLACHEMLLDM YPGGLTAW P V+ V+ W AYRGQ AASGGE+G++ +A VVA+A + WL+++ E PQ LTK Q++KAA++A AA GI K L+LEKGKD+V E LH+AL VL++V+L L +VNGPGV+PRNL G+FPACFM+ SGV+AYNSFLRQAR +GG ++DFFPAF LAA L A G +Q A Sbjct: 4 RNETDFLNSDFPMYAAGGVTLFIIYRAFVTKSRGEPLQPACMSKGVFPAAFFTFVGSLACHEMLLDMMGYPGGLTAWAPAVLAVVACSWVAYRGQLAASGGELGLSVIAPVVALAALTISWLVADEVEQPQNLTKAQLKKAAKDAAKK-------AAAGIGAAGGGKMLYLEKGKDVVTEQLHVALGVLVVVVLVLALVNGPGVWPRNLQQGAFPACFMIASGVLAYNSFLRQARESDGGSLDDFFPAFAAALAATLLARKGSAMQASA 265 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1016.225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1016.225.1 >prot_D-dichotoma_M_contig1016.225.1 ID=prot_D-dichotoma_M_contig1016.225.1|Name=mRNA_D-dichotoma_M_contig1016.225.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=277bp MGKEEQDFLQSDFPMYAAIGVLTFFLYRAFVSRAENTPVQPEWMTKGVFPback to top mRNA from alignment at D-dichotoma_M_contig1016:41434..55484+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1016.225.1 ID=mRNA_D-dichotoma_M_contig1016.225.1|Name=mRNA_D-dichotoma_M_contig1016.225.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=14051bp|location=Sequence derived from alignment at D-dichotoma_M_contig1016:41434..55484+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1016:41434..55484+ >mRNA_D-dichotoma_M_contig1016.225.1 ID=mRNA_D-dichotoma_M_contig1016.225.1|Name=mRNA_D-dichotoma_M_contig1016.225.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1662bp|location=Sequence derived from alignment at D-dichotoma_M_contig1016:41434..55484+ (Dictyota dichotoma ODC1387m male)back to top |