mRNA_D-dichotoma_M_contig1014.213.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 293 bits (751), Expect = 7.840e-85 Identity = 176/485 (36.29%), Postives = 261/485 (53.81%), Query Frame = 1 Query: 1 PKCKTVLGTRIIFKRKVGKDGLVEKYKCRFGAQGFRQIKGLHFQESSSPTPAQPSICVALALMALADWEG*QLDVEMAYLEADVGEELYIELPDGYRESRNQVGRLQKAMYGLVHAGLL*SKKFGGELEKKGFERSEANPCVFRRRSQGKVVVIILV*VDDLLLLSATEQDEQLALEDLRSSFPMKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGIIPASLGVAPLSKGDGSQTDAEISNRRDT------PYREAVGALMWITTMTRPDRSFVAHNVADFSDNPGPAHWKAVQKALQYLKRTVDLGVTYGGGTAGMKLPAWVDADHATGPDTRRSVSGVAVMLEWRAISWFSRAQWVAATATSESEYVALAEVVNELRFLSQVKEFMTPPIE-YKINTYEDNKGAI*MANKRFSSRRTRHIDNELYIERDAVDGKNVRVEYVKSGEQQADVLTKALDVKTFERHREYLLNI 1434 P+ + + T+ +F K + GL+ +K R A+GF Q+ G + SSS PA SI +A+A D++ AY A + EELY+ + DG +V ++++A+YGL +G + L G+E+ A+PCVFR+ GKVV II++ VDD++ + + E+ E+L L LR + P+KDLGE + Y GC I RD + T T Q+ Y+ + + F T PA +AE+ +RD P R+A+G LMW T TRPD + + V + P WKA+ + L YL T+DLG+TY G+ G+ L +VDA +A RRSV+G+AV + +S S+ Q + + +TSE+EY+A E V E F+ V F+ P KI EDN+GAI + FSS R++HID + R+ + VEY+ + EQ AD+LTKAL E HR L+NI Sbjct: 775 PEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEEL-LTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPAD-------------PNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGS-GLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1244
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 293 bits (749), Expect = 6.640e-84 Identity = 178/479 (37.16%), Postives = 261/479 (54.49%), Query Frame = 1 Query: 1 PKCKTVLGTRIIFKRKVGKDGLVEKYKCRFGAQGFRQIKGLHFQESSSPTPAQPSICVALALMALADWEG*QLDVEMAYLEADVGEELYIELPDGYRESRNQVGRLQKAMYGLVHAGLL*SKKFGGELEKKGFERSEANPCVFRRRSQGKVVVIILV*VDDLLLLSATEQDEQLALEDLRSSFPMKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGIIPASLGVAPLSKGDGSQTDAEISNRRDTPYREAVGALMWITTMTRPDRSFVAHNVADFSDNPGPAHWKAVQKALQYLKRTVDLGVTYGGGTAGMKLPAWVDADHATGPDTRRSVSGVAVMLEWRAISWFSRAQWVAATATSESEYVALAEVVNELRFLSQVKEFMTPPIE-YKINTYEDNKGAI*MANKRFSSRRTRHIDNELYIERDAVDGKNVRVEYVKSGEQQADVLTKALDVKTFERHREYLLNI 1434 P+ + + T+ +F K + GL+ +K R A+GF Q+ G + SSS PA SI +A+A D++ AY A + EELY+ + DG +V ++++A+YGL +G + L G+E+ A+PCVFR+ GKVV II++ VDD++ + + E+ E+L L LR + P+KDLGE + Y GC I RD + T T Q+ Y+ + + F T PA A L G + D E D P R+A+G LMW T TRPD + + V + P WKA+ + L YL T+DLG+TY G+ G+ L +VDA +A RRSV+G+AV + +S S+ Q + + +TSE+EY+A E V E F+ V F+ P KI EDN+GAI + FSS R++HID + R+ + VEY+ + EQ AD+LTKAL E HR L+NI Sbjct: 1328 PEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEEL-LTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPN-ADL----GPKRDDEPGV--DKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGS-GLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1797
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 278 bits (711), Expect = 2.400e-82 Identity = 173/470 (36.81%), Postives = 259/470 (55.11%), Query Frame = 1 Query: 1 PKCKTVLGTRIIFKRKVGKDGLVEKYKCRFGAQGFRQIKGLHFQESSSPTPAQPSICVALALMALADWEG*QLDVEMAYLEADVGEELYIELPDGYRESRNQVGRLQKAMYGLVHAGLL*SKKFGGELEKKGFERSEANPCVFRRRSQGKVVVIILV*VDDLLLLSATEQDEQLALEDLRSSFPMKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGIIPASLGVAPLSKGDGSQTDAEISNRRDTPYREAVGALMWITTMTRPDRSFVAHNVADFSDNPGPAHWKAVQKALQYLKRTVDLGVTYGGGTA-GMKLPAWVDADHATGPDTRRSVSGVAVMLEWRAISWFSRAQWVAATATSESEYVALAEVVNELRFLSQVKEFMTPPIE-YKINTYEDNKGAI*MANKRFSSRRTRHIDNELYIERDAVDGKNVRVEYVKSGEQQADVLTKALDVKTF 1404 P+ V+ R +FK K + G + K K R A+GF+Q G+ + E+ SPT SI + +AL + E LD+E A+ ++ + E+ ++LP G ++ RL K++YGL A K+ +L + GFE+S ++PCV R +V+ II + VDD+L + T++ ++ +E L S P K+LGEV + GC +RDR+A T+ Q Y+++V E F+ +T IPAS P + D E D P+RE VG LMWI TRP+ S VA S P + WKA QK L YLK T L + Y T + +VDAD A+ RRSVSG V++ +SWFS Q + +TSE+EY+A+ + V E F++ + + + P + KI+ +EDN+GAI +A SS R++HID + R+ + + V +V S EQ AD+LTKAL F Sbjct: 252 PEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILY-AGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPAS----PANDSRSVMEDEEAG---DVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM) HSP 1 Score: 262 bits (669), Expect = 2.060e-78 Identity = 161/479 (33.61%), Postives = 262/479 (54.70%), Query Frame = 1 Query: 1 PKCKTVLGTRIIFKRKVGKDGLVEKYKCRFGAQGFRQIKGLHFQESSSPTPAQPSICVALALMALADWEG*QLDVEMAYLEADVGEELYIELPDGYRESRNQVGR--LQKAMYGLVHAGLL*SKKFGGELEKKGFERSEANPCVFRRRSQGKVVVIILV*VDDLLLLSATEQDEQLALEDLRSSFPMKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGII--PASLGVAPLSKGDGSQTDAEISNRRDTPYREAVGALMWITTMTRPDRSFVAHNVADFSDNPGPAHWKAVQKALQYLKRTVDLGVTYGGGTAGMKLPAWVDADHATGPDTRRSVSGVAVMLEWRAISWFSRAQWVAATATSESEYVALAEVVNELRFLSQVKEFMTPPIEYKINTYEDNKGAI*MANKRFSSRRTRHIDNELYIERDAVDGKNVRVEYVKSGEQQADVLTKALDVKTFERHREYL 1425 P+ K +G + +F+ K +G V K+K R A+G+ Q G+ F ++ +P + SI +LA A D E +DV+ A+L DV EELY++ PDG+ + N + L++A+YG A + K LE +GF RS+A+PCV+ RRS + ++++ VDDL+L S T++ + L+ F +K+LGE+ G I R+R+ +T+ +QR Y++ +AE F K + PA + ++ +A ++ PYRE VGALM++ T TRPD + VA F + +HW A ++ L+YLK T D+G+ + G G + + DA+ A DTRRS +G L AISW S+ Q AT+++E+EY +L E L + + M + Y+DN+G I +A RT+HI + + RD ++ +R++Y + E AD +T AL T ++HR+++ Sbjct: 20 PRDKKAIGFKWVFRIKRDPNGNVVKFKARLVAKGYTQRPGIDFTDTFAPVAREESINASLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQSNPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDEYSIVVIY-VDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKCKAVHTPADCNSKLVKM---TEEEAFVAKY---PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVFNGAIKGEPI-GYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYTSLYSATQEAVRLRLLLKDMGYEDQGATLIYQDNQGCIALAKNPVYHARTKHIAIKFHFLRDKIERAVIRLDYKPTDEMIADGMTNAL---TRDKHRQFV 487
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 259 bits (663), Expect = 2.290e-77 Identity = 159/472 (33.69%), Postives = 259/472 (54.87%), Query Frame = 1 Query: 16 VLGTRIIFKRKVGKDGLVEKYKCRFGAQGFRQIKGLHFQESSSPTPAQPSICVALALMALADWEG*QLDVEMAYLEADVGEELYIELPDGYRESRNQVGRLQKAMYGLVHAGLL*SKKFGGELEKKGFERSEANPCVFRRRSQGKVVVIILV*VDDLLLLSATEQDEQLALEDLRSSFPMKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGII--PASLGVAPLSKGDGSQTDAEISNRRDTPYREAVGALMWITTMTRPDRSFVAHNVADFSDNPGPAHWKAVQKALQYLKRTVDLGVTYGGGTAGMKLPAWVDADHATGPDTRRSVSGVAVMLEWRAISWFSRAQWVAATATSESEYVALAEVVNELRFLSQVKEFMTPPIEYKINTYEDNKGAI*MANKRFSSRRTRHIDNELYIERDAVDGKNVRVEYVKSGEQQADVLTKALDVKTFERHREYL 1425 V+ T+ +F +K + G + ++K R A GF Q+ G+ F E+ + + SI + L++ A + QLDV+ A+L AD+ E++YIE P+G + ++V +L KA+YGL AG K G L GF+ ++ C++ R+ G I L VDD+++ T+ + + + F +K+LG V + G I DR R ++ +Q YV+T+ E F+ + + P + LSK DG + D + + PYR +G L ++ TRPD +F +++ F +NPGP HW A + L+YLK T D G++YGG + DAD T D RRSVSG+ +M+ I + ++ Q A ++SE+EY+AL+ E+ ++ + + I+ I +EDN+GAI +A+ RT+HID + RD V +++ YV++ Q AD+LTK+L K FE RE + Sbjct: 37 VIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDTTYICLY-VDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLK-LSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVRDLVADSVIKLSYVETQRQLADILTKSLGTKRFEFLRELM 506
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Match: A0A6A4CLK4_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CLK4_9STRA) HSP 1 Score: 256 bits (655), Expect = 4.280e-76 Identity = 160/466 (34.33%), Postives = 251/466 (53.86%), Query Frame = 1 Query: 19 LGTRIIFKRKVGKDGLVEKYKCRFGAQGFRQIKGLHFQESSSPTPAQPS-ICVALALMALADWEG*QLDVEMAYLEADVGEELYIELPDGYRESRNQVGRLQKAMYGLVHAGLL*SKKFGGELEKKGFERSEANPCVFRRRSQGKVVVIILV*VDDLLLLSATEQDEQLALEDLRSSFPMKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGII--PASLGVAPLSKGDGSQTDAEISNRRDTPYREAVGALMWITTMTRPDRSFVAHNVADFSDNPGPAHWKAVQKALQYLKRTVDLGVTYGGGTAGMKLPAWVDADHATGPDTRRSVSGVAVMLEWRAISWFSRAQWVAATATSESEYVALAEVVNELRFLSQVKEFMTPPIEYKINTYEDNKGAI*MANKRFSSRRTRHIDNELYIERDAVDGKNVRVEYVKSGEQQADVLTKALDVKTFE 1407 +G R +F +K + G V +YK R A+GF+Q G+ F E+ SP S + V L++ A ++ QLD + A+L +++ + +Y+E+P G +R +L KA+YGL A +K GF+ A+ CV+ +RS+ + + L VDD+++ + T ++ + + L+++F MK+LG G I D A T+ RY+ V E F + + P + G+ LSK TDAE + R PYR +G L++ITT TRPD +FV ++ F +NP HW A + L+YLK T+ G+ Y GGT + L A+ DAD T D RRS SGV VM + + S+ Q A +++E+EY+AL+ V E+ + + M +EDN+GAI + + RT+H+D + + V+ V+VEYV + Q AD+LTKAL KT + Sbjct: 38 IGCRWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPVANMNSTLRVVLSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVPFGIENARGYQYQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYVCLY-VDDMIIAAKTSEEIRDVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKPTRYIDDVVEHFGQENAKPVDNPCAAGLK-LSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPEKQHWNAAVRVLRYLKSTLQHGIIYHGGTHTVTLKAYSDADWGTSLDDRRSGSGVMVMTGNAPVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRAMLTVMGTLQRNATTIWEDNQGAIALVHNAGYHARTKHVDIRHHFTTENVERGTVKVEYVDTKNQLADILTKALGTKTLK 501
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 253 bits (645), Expect = 1.630e-75 Identity = 156/436 (35.78%), Postives = 242/436 (55.50%), Query Frame = 1 Query: 133 ESSSPTPAQPSICVALALMALADWEG*QLDVEMAYLEADVGEELYIELPDGYRESRNQVGRLQKAMYGLVHAGLL*SKKFGGELEKKGFERSEANPCVFRRRSQGKVVVIILV*VDDLLLLSATEQDEQLALEDLRSSFPMKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGIIPASLGVAPLSKGDGSQTDAEISNRRDTPYREAVGALMWITTMTRPDRSFVAHNVADFSDNPGPAHWKAVQKALQYLKRTVDLGVTYG-GGTAGMKLPAWVDADHATGPDTRRSVSGVAVMLEWRAISWFSRAQWVAATATSESEYVALAEVVNELRFLSQVKEFMTPPIEYK-INTYEDNKGAI*MANKRFSSRRTRHIDNELYIERDAVDGKNVRVEYVKSGEQQADVLTKALDVKTFERHREYLLNI 1434 E+ +PT A S+ + A+ + D++ A++++D+ E++++ LP+G + +L K++YGL A L GF + A+ CVFR +G+VVV ++V VDD+ + E+ +Q DL + P+K+LG++ Y GC RD A T+ Q+ Y + + F + IP +G+ LS+ D D E+ + P+RE +G+LMW+ T TRPD + VA + +P HW+A L Y+ RT DLG+T+ G AG+ + +VDAD+A+ RRSVSG VM ISWFSR Q +T+E+EYV+LA+V+ E+ FL QV FM P I +EDN+GAI +A S+ ++HID + R+ V K + + +V+S Q AD LTKAL FE HR Y++++ Sbjct: 10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFG-RDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD---QDEEVVS---WPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 437
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 254 bits (649), Expect = 3.200e-74 Identity = 158/446 (35.43%), Postives = 245/446 (54.93%), Query Frame = 1 Query: 103 FRQIKGLHFQESSSPTPAQPSICVALALMALADWEG*QLDVEMAYLEADVGEELYIELPDGYRESRNQVGRLQKAMYGLVHAGLL*SKKFGGELEKKGFERSEANPCVFRRRSQGKVVVIILV*VDDLLLLSATEQDEQLALEDLRSSFPMKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGIIPASLGVAPLSKGDGSQTDAEISNRRDTPYREAVGALMWITTMTRPDRSFVAHNVADFSDNPGPAHWKAVQKALQYLKRTVDLGVTYG-GGTAGMKLPAWVDADHATGPDTRRSVSGVAVMLEWRAISWFSRAQWVAATATSESEYVALAEVVNELRFLSQVKEFMTPPIEYK-INTYEDNKGAI*MANKRFSSRRTRHIDNELYIERDAVDGKNVRVEYVKSGEQQADVLTKALDVKTFERHREYLLNI 1434 FR + E+ +PT A S+ + A+ + D++ A++++D+ E++++ LP+G + +L K++YGL A L GF + A+ CVFR +G+VVV ++V VDD+ + E+ +Q DL + P+K+LG++ Y GC RD A T+ Q+ Y + + F + IP +G+ LS+ D D E+ + P+RE +G+LMW+ T TRPD + VA + +P HW+A L Y+ RT DLG+T+ G AG+ + +VDAD+A+ RRSVSG VM ISWFSR Q +T+E+EYV+LA+V+ E+ FL QV FM P I +EDN+GAI +A S+ ++HID + R+ V K + + +V+S Q AD LTKAL FE HR Y++++ Sbjct: 174 FRGLMEADCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFG-RDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD---QDEEVVS---WPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 611
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Match: A0A6H5K1G1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G1_9PHAE) HSP 1 Score: 252 bits (644), Expect = 3.950e-74 Identity = 162/490 (33.06%), Postives = 252/490 (51.43%), Query Frame = 1 Query: 1 PKCKTVLGTRIIFKRKVGKDGLVEKYKCRFGAQGFRQIKGLHFQESSSPTPAQPSICVALALMA-----LADWEG*QLDVEMAYLEADVGEELYIELPDGYRESRNQVGRLQKAMYGLVHAGLL*SKKFGGELEKKGFERSEANPCVFRRRSQGKVVVIILV*VDDLLLLSATEQDEQLALEDLRSSFPMKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGIIPASLGVAPLSKGDGSQTDAEISNRRDT------PYREAVGALMWITTMTRPDRSFVAHNVADFSDNPGPAHWKAVQKALQYLKRTVDLGVTYGGGTAGMKLPAWVDADHATGPDTRRSVSGVAVMLEWRAISWFSRAQWVAATATSESEYVALAEVVNELRFLSQVKEFMTPPIE-YKINTYEDNKGAI*MANKRFSSRRTRHIDNELYIERDAVDGKNVRVEYVKSGEQQADVLTKALDVKTFERHREYLLNI 1434 P+ + +G + +F K + GL+ K R A+ F QI G+ F SSS P+ SI +A+ LA W DV+ AY+ A + EE Y+ P+G +V ++++A+YGL +G + L + +E+ +PCVFR+ G+VV +I++ VDD+L+ +A E + + L FP+KDLGE + Y GC I D + Q Y++++ + FD T PA+ TDA++ RD P REA+G LMW T +TRPD + + + + +P W A+ + + YL T D G+T+ G+ G+ L + + D RRS +G+AV + + ++ Q V A +TSE+EY+A E V E F+ V F+ P KI EDNKGA+ + FSS R++HID + R+ + EYV +GEQ AD+LTK L + E HR+ +N+ Sbjct: 55 PEGRKAIGLKWVFSWKTNEKGLIVDNKARMVARVFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHW-----DVKQAYIHAMLKEETYLRFPEGCGSISGKVVKVERALYGLKQSGREWGFEAADALIESEYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAA-------------TDADLGPTRDDKPAVDKPVREAIGCLMW-TKLTRPDIALPLNKLHKIAHSPTWRKWNALVRIMSYLNFTKDFGITFVRGS-GLDLSVFAEVD-------RRSTAGLAVTVGGTVVCASTKTQPVTAQSTSEAEYMAAGEGVKEALFVRGVLSFIAPETSGAKIKVLEDNKGALALIENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKVLGREQLEYHRKARMNL 516
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Match: A0A225WDK2_9STRA (Integrase, catalytic core protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDK2_9STRA) HSP 1 Score: 254 bits (648), Expect = 4.010e-74 Identity = 164/472 (34.75%), Postives = 267/472 (56.57%), Query Frame = 1 Query: 1 PKCKTVLGTRIIFKRKVGKDGLVEKYKCRFGAQGFRQIKGLHFQESSSPTPAQPSICVALALMALADWEG*QLDVEMAYLEADVGEELYIELPDGYRESRNQ--VGRLQKAMYGLVHAGLL*SKKFGGELEKKGFERSEANPCVFRRRSQGKVVVIILV*VDDLLLLSATEQDEQLALEDLRSSFPMKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGIIPASLGVAP---LSKGDGSQTDAEISNRRDTPYREAVGALMWITTMTRPDRSFVAHNVADFSDNPGPAHWKAVQKALQYLKRTVDLGVTYGGGT-AGMKLPAWVDADHATGPDTRRSVSGVAVMLEWRAISWFSRAQWVAATATSESEYVALAEVVNELRFLSQV-KEFMTPPIEYKINTYEDNKGAI*MANKRFSSRRTRHIDNELYIERDAVDGKNVRVEYVKSGEQQADVLTKALDV 1395 PK K L ++ IFK K G +E+YK R +G+ QIK + ++E +P S+ + LAL+A+ DWE Q DV+ A+L D+ EE+Y+ P+G E+ + V +L +A+YGL A KK L+ KGF + +++ C++ R G V II + VDDLLL++ T Q L + F KD+G V + G + R+R +T++ DQ Y + V E F+ + + P P LSK + + + E + ++ YR VG+LM++ T +RPD +F V+ + ++PG AHW A ++ L+Y+K T+ G+ G + G +L A+VD+D+A DTRRSVSG + + AI++ ++Q A +++E+EY++LA V E+ FL ++ E +N DN+ AI MAN +RT+HI + + R+ V ++ +EYV + + AD+LTK++ V Sbjct: 79 PKGKRALTSKWIFKIKYDALGNIERYKARLVIRGYEQIKYIDYEEIFAPVIRLESLRLLLALVAINDWECEQTDVDTAFLNGDLAEEVYMIQPEGLEEAGKEDLVCQLLQALYGLKQAPRAWHKKLTDYLKSKGFVKLDSDSCIYVRTG-GSGVAIIGIYVDDLLLIADTASRIQEMKSMLSAGFKCKDMGAVHHILGLRVKRNRALKTLSIDQTAYAKGVIEKFNLMQ--LNPCKTPCDPNVILSKENCPKNEDERAQMKNKDYRGLVGSLMYLMTGSRPDIAFGIQCVSKYLNDPGLAHWNAAKRILRYVKGTIGYGLVIDGRSRTGKQLTAFVDSDYAKDIDTRRSVSGYVMQMGDCAITYSCKSQRTVALSSTEAEYMSLAHGVKEMLFLRELLMELGVQQHSTAVNV--DNQSAIAMANNPVHHQRTKHIHSRYHFVRERVAMGDIFIEYVGTKDNVADLLTKSVTV 545 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1014.213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1014.213.1 >prot_D-dichotoma_M_contig1014.213.1 ID=prot_D-dichotoma_M_contig1014.213.1|Name=mRNA_D-dichotoma_M_contig1014.213.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=230bp MKDLGEVSNYPGCHITRDRKARTVTFDQRRYVQTVAECFDTKKTGIIPASback to top mRNA from alignment at D-dichotoma_M_contig1014:99758..101191+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1014.213.1 ID=mRNA_D-dichotoma_M_contig1014.213.1|Name=mRNA_D-dichotoma_M_contig1014.213.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=1434bp|location=Sequence derived from alignment at D-dichotoma_M_contig1014:99758..101191+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1014:99758..101191+ >mRNA_D-dichotoma_M_contig1014.213.1 ID=mRNA_D-dichotoma_M_contig1014.213.1|Name=mRNA_D-dichotoma_M_contig1014.213.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1380bp|location=Sequence derived from alignment at D-dichotoma_M_contig1014:99758..101191+ (Dictyota dichotoma ODC1387m male)back to top |