mRNA_D-dichotoma_M_contig1013.209.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1013.209.1
Unique NamemRNA_D-dichotoma_M_contig1013.209.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Match: UPI001B820D64 (glutathione S-transferase n=2 Tax=Undibacterium TaxID=401469 RepID=UPI001B820D64)

HSP 1 Score: 155 bits (393), Expect = 4.750e-44
Identity = 86/209 (41.15%), Postives = 123/209 (58.85%), Query Frame = 3
Query:   54 LCLTYFQL-SGRAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNALPTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIMLFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKLKCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAHFETVSKHPKV 677
            L +TYF +  GRAEP RLA  IGGV FED R ++PEF  +R  TPF  +PTLEV+G    Q  ++LRYAGK + LYP+DA  AL  DE++   E+A + +  T ++  +                QK  R  L   ++   L  +E KL+ N   YF  + +T+ADL++F  V+ + SG +  +PTDLV KVAPA+ AH + +++HP V
Sbjct:    4 LKITYFDMHGGRAEPVRLALAIGGVDFEDHRFAYPEFAAVRKTTPFGQVPTLEVDGVQITQCDSMLRYAGKLAGLYPEDAYQALLCDEVMYVVEEAGVKMGPTYRMTGEE---------------QKAARLALVNSSMPVYLAWLEKKLQANGGNYFADNRLTVADLKVFVDVRTLNSGRLDHIPTDLVEKVAPALNAHAKRIAEHPAV 197          
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Match: UPI001B81D59D (glutathione S-transferase n=1 Tax=Undibacterium fentianense TaxID=2828728 RepID=UPI001B81D59D)

HSP 1 Score: 155 bits (393), Expect = 4.750e-44
Identity = 87/209 (41.63%), Postives = 119/209 (56.94%), Query Frame = 3
Query:   54 LCLTYFQL-SGRAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNALPTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIMLFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKLKCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAHFETVSKHPKV 677
            L +TYF    GRAEP RLA  IGGV FED R S+PEF E+R  TPF  +P LEV+G    Q  A+LRYAGK + LYP DAL AL  DE++   E+A I +  T ++  +                QK  R  L   ++   L  +E KL      YF    +T+ADL++F  ++ + SG +  +PTDLV KVAP++ AH + V++HP +
Sbjct:    4 LKITYFDFHGGRAEPVRLALAIGGVPFEDHRFSYPEFAEVRKNTPFGQVPVLEVDGEQITQCDAMLRYAGKLAGLYPSDALQALVCDEVMFVIEEAGIKMGPTYRMSGEE---------------QKAARLALVNSSIPVYLTWLEKKLAAGGGEYFADHRLTVADLKVFIDIRTLNSGRLDHIPTDLVEKVAPSLNAHMKRVAEHPAI 197          
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Match: A0A536WTG5_9PROT (Glutathione S-transferase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WTG5_9PROT)

HSP 1 Score: 154 bits (390), Expect = 1.380e-43
Identity = 89/210 (42.38%), Postives = 122/210 (58.10%), Query Frame = 3
Query:   54 LCLTYFQLSG-RAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNALPTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIMLFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKLKCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAHFETVSKHPKVS 680
            L LTYF   G R EP RLA +IGG+ FED RI+  ++P  R KTPF A+PTLEV+G    QS ++ RY GK + LYP D   AL  DEI+ A ED    +  T+ +D       +GA        +K  R EL  G L   LE+ + KLK     YF    +T+ADL++F +++ ++SG +  +P DLV +VAP +  HFE V+ HP V+
Sbjct:    4 LKLTYFDFDGGRGEPARLALHIGGIPFEDVRIAGKDWPAFRDKTPFYAMPTLEVDGRGVTQSNSINRYVGKLAGLYPKDDWQALLCDEIMDAAEDISTRIGNTINID-------EGA--------KKKTREELVAGRLTRYLEQFQTKLKATGGDYFSDARLTVADLKIFMLIRWLRSGVLDHIPKDLVDRVAPLLVKHFERVASHPMVA 198          
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Match: C9YGR5_CURXX (Uncharacterized protein n=3 Tax=Comamonadaceae TaxID=80864 RepID=C9YGR5_CURXX)

HSP 1 Score: 152 bits (383), Expect = 1.560e-42
Identity = 82/211 (38.86%), Postives = 123/211 (58.29%), Query Frame = 3
Query:   54 LCLTYFQL-SGRAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNALPTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIMLFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKLKCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAHFETVSKHPKVSS 683
            L L+YF +  GRAEP RLA ++GGV F+D R +FP+F E+R  TPF  +PTL+V+G  + QS ALLR+AGK + LYP D L AL  DE+    EDA + +  T ++  +                QK  R  L  G++   L  ++ +L      +F    +T+ADL++F  V+ + SG    VPTDLV++VAPA+ AH + +++ P + +
Sbjct:    4 LKLSYFDMHGGRAEPVRLALHLGGVAFDDHRFTFPQFAEIRKSTPFGQVPTLDVDGTQFTQSDALLRFAGKLAGLYPTDPLQALYCDEVTYVVEDAGVKMGPTFRMSGEE---------------QKAARLALVNGSMPVYLGWLQQRLHAQGGEFFADGRLTVADLKVFIDVRALNSGRFDHVPTDLVARVAPALNAHMQRIAETPAIKA 199          
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Match: A0A1V9YVK9_9STRA (Glutathione S-transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVK9_9STRA)

HSP 1 Score: 150 bits (378), Expect = 8.830e-42
Identity = 83/211 (39.34%), Postives = 128/211 (60.66%), Query Frame = 3
Query:   51 SLCLTYFQLSGRAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNALPTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIMLFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKLKCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAHFETVSKHPKVSS 683
            +L +TYF ++GRAE TRLA +IG + FED R++   F  L+P  PF  +P L V+G +  QS A+ RYAG+ + LYP DAL A +VDEI+ A +D +  L  + + + D A              + + R EL+ G L E    IEA+L  +  PYF+GD++TIADL+++   +++ SG++ G+PTD++    P   A  + V+ HPKV++
Sbjct:    5 TLKITYFDMTGRAELTRLALHIGDIPFEDDRLTREAFAALKPTLPFKQVPVLTVDGEVLAQSHAMARYAGRLAGLYPTDALEAFRVDEILAASDDTLAKLMPSFR-EQDAAK-------------RLVLREELSAGPLPEHFACIEARLAAHKGPYFLGDALTIADLELYGSRQMLSSGWLDGIPTDILDAY-PRWNAIADAVAAHPKVAA 200          
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Match: A0A257CM47_9BURK (Glutathione S-transferase n=1 Tax=Burkholderiales bacterium PBB3 TaxID=2015565 RepID=A0A257CM47_9BURK)

HSP 1 Score: 149 bits (376), Expect = 1.760e-41
Identity = 87/211 (41.23%), Postives = 119/211 (56.40%), Query Frame = 3
Query:   54 LCLTYFQL-SGRAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNALPTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIMLFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKLKCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAHFETVSKHPKVSS 683
            L L+YF +  GR EP RLA  +GGV FED R++F EF  LR   PF  LP LE++G    QS A+LRYAGK SNLYP DA  AL  DE+    E+A I +  T ++  +                QK  R  L  G++   L  ++ +L      YF    +T+ADL++F  V+ + SG    VPTDLV +VAPA+ AH + V++HP V++
Sbjct:    4 LKLSYFDMHGGRGEPVRLALAVGGVAFEDHRLTFAEFGGLRKTVPFGQLPVLEIDGLAVTQSDAMLRYAGKLSNLYPADAYQALLCDEVSFVVEEAGIKMGPTFRMAGEE---------------QKAARLALVNGSMPVYLAWLQKRLIAQGGEYFADKRLTVADLKVFIDVRSLNSGRWDHVPTDLVERVAPALNAHMQRVAEHPAVAA 199          
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Match: UPI00164C84DC (glutathione S-transferase family protein n=1 Tax=Undibacterium jejuense TaxID=1344949 RepID=UPI00164C84DC)

HSP 1 Score: 148 bits (374), Expect = 3.530e-41
Identity = 83/211 (39.34%), Postives = 121/211 (57.35%), Query Frame = 3
Query:   54 LCLTYFQL-SGRAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNALPTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIMLFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKLKCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAHFETVSKHPKVSS 683
            L LTYF    GR EP RLA  IGG+ FED R +F EFP++R   PF  +P LE++G +  Q  A+LRYAGK ++LYP D L AL  DE++   E++ + L  T ++ ++                Q+  R  L  G++   L+ +E +L      YF  + +TIADL++F  V+ + SG +  VPTDLV KVAPA+ AH + ++  P V +
Sbjct:    4 LKLTYFDFHGGRGEPVRLALAIGGIAFEDHRFTFAEFPDVRKIAPFGQVPLLEIDGVVITQCDAILRYAGKLADLYPTDPLQALLCDEVMYVVEESTVRLGPTFRMTSEE---------------QRAARLALVNGSMPVYLQWLEKQLLARGGEYFADNRLTIADLKVFVDVRGLNSGRLDHVPTDLVEKVAPALNAHMKRIAALPAVQA 199          
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Match: A0A534FQ73_9GAMM (Glutathione S-transferase n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534FQ73_9GAMM)

HSP 1 Score: 147 bits (370), Expect = 1.410e-40
Identity = 84/210 (40.00%), Postives = 117/210 (55.71%), Query Frame = 3
Query:   54 LCLTYFQLSG-RAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNALPTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIMLFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKLKCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAHFETVSKHPKVS 680
            L LTYF   G R EP RLA +IGG+ FED RIS  ++P  R   PF A+PTLEV+G +  QS ++ RY GK + LYP D   AL  DE++ A ED    +  T+ L  D                +K  R EL  G +   LE+ +A+LK     YF    +T+ADL++F  V+ +++G +  +P DLV +VAP +  H E V+ HP V+
Sbjct:    4 LKLTYFDFDGGRGEPARLALHIGGIAFEDHRISGKDWPGFRDMMPFLAMPTLEVDGKVVSQSNSINRYVGKLAGLYPKDDWQALLCDEVMDAAEDISTRIAHTIDLAEDA---------------KKKAREELVAGRITRYLEQFQARLKAAGGEYFADQRLTVADLKIFIWVRWLRAGVLDHIPKDLVDRVAPLLVKHSERVASHPGVA 198          
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Match: UPI00036F7717 (glutathione S-transferase n=1 Tax=Leeia oryzae TaxID=356662 RepID=UPI00036F7717)

HSP 1 Score: 145 bits (367), Expect = 3.860e-40
Identity = 85/209 (40.67%), Postives = 116/209 (55.50%), Query Frame = 3
Query:   60 LTYFQL-SGRAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNALPTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIMLFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKLKCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAHFETVSKHPKVSS 683
            LTYF    GRAEP RLAF IGGV FED R +  EFPE+R  TPF  +P L V+G    Q  A+ RYAGK + LYP D   AL  DE++   E+A + +  T ++  +                QK  R  L EG++   L  ++ +L  +   YF  + +T+ADL++F  V+ + SG    VPTDLV KVAPA+  H   VS  P+V++
Sbjct:    6 LTYFDFHGGRAEPARLAFSIGGVPFEDHRFAGTEFPEIRKFTPFGQVPVLTVDGVQVTQCDAITRYAGKLAGLYPTDPFQALLCDEVMYVVEEANVKIGPTFRMKGEE---------------QKAARLALVEGSMPVYLRWLQKQLLAHGGEYFADNRLTVADLKVFVDVRTLNSGRFDHVPTDLVEKVAPALNEHMRRVSSLPEVAA 199          
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Match: A0A1H9GG19_9GAMM (Glutathione S-transferase n=1 Tax=Solimonas aquatica TaxID=489703 RepID=A0A1H9GG19_9GAMM)

HSP 1 Score: 145 bits (365), Expect = 8.390e-40
Identity = 83/211 (39.34%), Postives = 122/211 (57.82%), Query Frame = 3
Query:   54 LCLTYFQL-SGRAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNALPTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIMLFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKLKCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAHFETVSKHPKVSS 683
            L LTYF   +GR EP RLAFYIGGV FED+RIS  ++ + R + P  A+P LEV+G    QS A++RYAGK + LYP DAL AL  DE++ A ED    +  T+++  +                +K  R  LAEGA+   L     +L+     +F    +T+AD+++F +V  ++SG +  +P DLV +VAP +  H E V + PK+++
Sbjct:    4 LVLTYFDFDAGRGEPARLAFYIGGVSFEDRRISPKDWAQHRDQMPLQAMPVLEVDGMPVTQSNAIVRYAGKLAGLYPQDALQALLCDELLDASEDLGSRIGATIQMSDEAQ--------------KKNARLALAEGAIPRHLRYFAQRLEAAGGNWFSDQRLTVADIKIFGLVNWLRSGALDHIPKDLVDRVAPTLVQHAERVRREPKIAA 200          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1013.209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001B820D644.750e-4441.15glutathione S-transferase n=2 Tax=Undibacterium Ta... [more]
UPI001B81D59D4.750e-4441.63glutathione S-transferase n=1 Tax=Undibacterium fe... [more]
A0A536WTG5_9PROT1.380e-4342.38Glutathione S-transferase n=1 Tax=Betaproteobacter... [more]
C9YGR5_CURXX1.560e-4238.86Uncharacterized protein n=3 Tax=Comamonadaceae Tax... [more]
A0A1V9YVK9_9STRA8.830e-4239.34Glutathione S-transferase n=1 Tax=Achlya hypogyna ... [more]
A0A257CM47_9BURK1.760e-4141.23Glutathione S-transferase n=1 Tax=Burkholderiales ... [more]
UPI00164C84DC3.530e-4139.34glutathione S-transferase family protein n=1 Tax=U... [more]
A0A534FQ73_9GAMM1.410e-4040.00Glutathione S-transferase n=3 Tax=Gammaproteobacte... [more]
UPI00036F77173.860e-4040.67glutathione S-transferase n=1 Tax=Leeia oryzae Tax... [more]
A0A1H9GG19_9GAMM8.390e-4039.34Glutathione S-transferase n=1 Tax=Solimonas aquati... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1013contigD-dichotoma_M_contig1013:241235..244561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score151.8
Seed ortholog evalue3.7e-34
Seed eggNOG ortholog338969.Rfer_3267
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K04097
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00590,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418
EggNOG free text desc.Glutathione S-transferase, C-terminal domain
EggNOG OGs1PPF9@1224,2VQQZ@28216,COG0625@1,COG0625@2
EC2.5.1.18,5.3.99.2
COG Functional cat.O
Best tax levelBetaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Exons5
Model size686
Cds size639
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1013.209.1prot_D-dichotoma_M_contig1013.209.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1013 241235..244514 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927498.2295961-CDS-D-dichotoma_M_contig1013:241234..2413661622927498.2295961-CDS-D-dichotoma_M_contig1013:241234..241366Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1013 241235..241366 -
1690798002.5813751-CDS-D-dichotoma_M_contig1013:241234..2413661690798002.5813751-CDS-D-dichotoma_M_contig1013:241234..241366Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1013 241235..241366 -
1622927498.2486296-CDS-D-dichotoma_M_contig1013:241542..2417131622927498.2486296-CDS-D-dichotoma_M_contig1013:241542..241713Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1013 241543..241713 -
1690798002.6048324-CDS-D-dichotoma_M_contig1013:241542..2417131690798002.6048324-CDS-D-dichotoma_M_contig1013:241542..241713Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1013 241543..241713 -
1622927498.259798-CDS-D-dichotoma_M_contig1013:241968..2420461622927498.259798-CDS-D-dichotoma_M_contig1013:241968..242046Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1013 241969..242046 -
1690798002.6142972-CDS-D-dichotoma_M_contig1013:241968..2420461690798002.6142972-CDS-D-dichotoma_M_contig1013:241968..242046Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1013 241969..242046 -
1622927498.2703786-CDS-D-dichotoma_M_contig1013:244040..2441361622927498.2703786-CDS-D-dichotoma_M_contig1013:244040..244136Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1013 244041..244136 -
1690798002.622168-CDS-D-dichotoma_M_contig1013:244040..2441361690798002.622168-CDS-D-dichotoma_M_contig1013:244040..244136Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1013 244041..244136 -
1622927498.2822225-CDS-D-dichotoma_M_contig1013:244352..2445141622927498.2822225-CDS-D-dichotoma_M_contig1013:244352..244514Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1013 244353..244514 -
1690798002.6298194-CDS-D-dichotoma_M_contig1013:244352..2445141690798002.6298194-CDS-D-dichotoma_M_contig1013:244352..244514Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1013 244353..244514 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927498.2959356-UTR-D-dichotoma_M_contig1013:244514..2445611622927498.2959356-UTR-D-dichotoma_M_contig1013:244514..244561Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1013 244515..244561 -
1690798002.6374722-UTR-D-dichotoma_M_contig1013:244514..2445611690798002.6374722-UTR-D-dichotoma_M_contig1013:244514..244561Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1013 244515..244561 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1013.209.1

>prot_D-dichotoma_M_contig1013.209.1 ID=prot_D-dichotoma_M_contig1013.209.1|Name=mRNA_D-dichotoma_M_contig1013.209.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=213bp
MSLCLTYFQLSGRAEPTRLAFYIGGVKFEDKRISFPEFPELRPKTPFNAL
PTLEVEGGIYGQSTALLRYAGKRSNLYPDDALTALKVDEIVMAGEDAVIM
LFGTLKLDADTAANSDGACFPCMICLQKIKRAELAEGALKELLERIEAKL
KCNSSPYFVGDSITIADLQMFTVVKIIKSGFVAGVPTDLVSKVAPAIEAH
FETVSKHPKVSS*
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mRNA from alignment at D-dichotoma_M_contig1013:241235..244561-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1013.209.1 ID=mRNA_D-dichotoma_M_contig1013.209.1|Name=mRNA_D-dichotoma_M_contig1013.209.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=3327bp|location=Sequence derived from alignment at D-dichotoma_M_contig1013:241235..244561- (Dictyota dichotoma ODC1387m male)
GTTTACTCGATCCGTAGAGAGCTTGTGACAGCGAATACAGGCTGGACATG TCTCTCTGTCTCACCTACTTCCAGCTAAGCGGGCGTGCCGAACCCACTCG CTTGGCGTTCTACATTGGTGGTGTGAAGTTCGAAGACAAACGCATCAGTT TTCCAGAGTTCCCGGAGCTCCGACCGAAGACTCCGTTTAATGCGCTTCCT ACACTCGAGGTGGGTAGATGTTACACCGCACTCAAGTTGCCCATGACCTG TTCGAAACTGTACAGTAGGACTCCGAGTGAGTGTAAGTTTGAGCTGTCCT TAGGATGAGTGCCTATGATACAAGACTACACCTTGGCAACGATACTGAAG ATGCTCAAGTTAGAGCCAGGTAGATTGTTCCATAATGGTTGATGCCATGT TTGCTCGCGAACTCGCATGAATTAGGTCGAAGGAGGAATCTACGGACAGT CAACTGCGTTACTTCGATATGCCGGGAAACGGTCCAACCTGTACCCTGAT GATGCGTTGACGGCTCTCAAGGTGAGGTGAAGGCTTGTTACCTATTTCCA AGCGTAGATTGTCTGCCTCGAGTTTTCTCTAGCAACAAGCGGTTTCGTAG GTATGGGACATCCCTTGGGTCATGAAGGTACAGTAGATGGATGTTGGGAA CCAGCAAAGAAGTTTCTTCCGCGCTTCCCTGTGCTTTGGCGTGTTCTTTA ACCCTTCGAGGTCTGTACCCCATAGGGTGTTGGGTACTATTTTCCCAAGG TACTGTAACACCCACAATGCCCGATTCAATTATATACGGAGCAAGAAAGA CCAAAAGGTGTTTATAAATCTATTCGTGTCTCGTATATGATTGGATCATA TAGAGTATTGGATGTTATGGTACCTCGGAATCACTATAAACCCAACACCT AACCCTGTTGCCTGTTGGGTCCAGTCCTAGAAGGGTTAATACCATCTGGT GATCTGGCGCGTCTTGATACTCGTGTTGTGTCGTGAATGTCTGCATACGA AGAGGTAGTGCAGCCGTGGACGAGCTTTGCCAAACGAACCACGAAGTGGA CAGGGACCGGGATAATCACGACGGAATTCGTGTCTACTGAATGCTACTGT TGTAGACATTACTGTACTTTACTGTAGTGTAGTGTAGCCCTGGACATACT GCGGTGAGGAGAGGAGAGGTGAAGAATAGCCGCGCCACTATCCCCAGTTG GGTTGTTGATCAAGGAGGACCTGTATCTTGGATGGCTTCGCCATGTTTAC CAACGAAGCAAGAAGTAACTCCGAACGCCTCGGTACTGGTTGACTTCCTT GGGATAAGAAAAGGATCAACGGATTTGCATCGGGCCAATATTTCCTTGCG GATCCAGTGTGAAAGCTGAAGTGGCAGGGAGTTCTACTCATGTGACGCAA GGTAGTATTGGCCAGTAATCTAACTGTCACGTTAACGGAAGGTGTGGCCC GACGCGCCCAGAAGTCTCACTCCTTTGGTGTAGTTAGGTTGAACCTGGAA GCGTCCATCGGCCAAGGTTTTCGTTACTATCGAACGAATAACGATTTGGC TTGGCAGTCAAATGTCGCTCCCGAGCACAACTGACTTTCATTAGGGCTTG AAGGTTACTCAGAATTGCGCGAATCCGTGTGCTACTGCATTCCAGACAAG TTGAACGCTACCATATGTCCAGGACGCTCAGCCCGTTGATGAAGTTTGGA GCTAAGACAATGCCATGTCGTGTGCCCGAAACGAAATCGCACACCTCGGA CGAAGGAAACGGAATTTCCAAGGGTTTGGCCGTTGCTGCTCGTCGTGAGT AGCAGCTCCAACGGTCCGGAGTTCCTTCGTCTCACGGATAGCGATTGGAG ACAACGGTTTGAGAGACCCTTGTCACTGTCTCGTCTATTTCGTTCAACGG TTCGAGTTCGTTGTCACTTCCTAGCTCAACTCGTCCCATGGTTCGAGTGA CTAGCGGAAGGGTCGAAGCTTCCCAAAAAATGTTAGCGAAAGTGGTCTTG TCCATCGATATTCAAGGGGGAGAATGGAGCTTGTGAGCAAACCACTTTCA ATTCGAAAGCACAGGTACAGTGGAAGCGGAACGTAAATATGGAAGACGTT GACTCCATGTCCGAAGTTGAAGTCATTGCCGTATACTGTGAAGAGTGCTA CAAGTGAAACCCGCTTTTCGTACGCATGGTGATCCATGTCATTCCGTAGA ATGGTTCGAGTGCCTGTTATACTTTCTCCTAGGTGAAGTTGGCAAAAGGT TGGAGTGACTATCGTTGCAAGCCTACCTCTTTTCAGCAACGGTTCTAGTG CCCGCTGTTTTATCCTAGGTGAAGTCGGCACACGGTTCGAGTGACCGAAA CCATTGATTTATTGAACGGTTCTAGTGTCTTTCAAATCACTGCTTCGTCC GAGGGGGCAAAATTGAACTCGTCAGGTTGTAGGTAGCGTTTCGTGAGCGA TATCCAATCATCTGACGGCTCTTGTGGTCTCCGCTTTTCCCAACACAATG TTGACATCTACTCAGGTCGACGAGATTGTTATGGCAGGAGAGGATGCTGT CATTATGCTTTTCGGGACCCTGAAACTCGACGCGGACACTGCGGTGAGAC TTTACTGGAGTAGTTCAGGAGGCATGATGGGCAAATCTGGGTGGAAGTAC TGTAGTAAATAACGTTGCGACCCTATCCTGTCAGGACATCTGCTGTATGA TGCGGTTCGACGCTGATACTCACGTGTCCTGCAGGAATGTGTTGTACTTG GTCGATGGATGAAAACACGGAATGGCGCTGCAAAGTAGGATACATGTTGT TTGCAGCAGACACCGACGCGAGCACGTAAAGTAGCGAAACGGTGCGAGGC AAATTCTGATGGTGCATGTTTTCCATGTATGATATGCCTACAGAAGATCA AGCGAGCTGAACTCGCGGAGGGTGCCCTCAAGGAACTGCTGGAGAGGATC GAAGCCAAGCTGAAGTGCAACTCCTCACCATACTTTGTTGGCGACTCTAT CACGATCGCTGACCTCCAGGTATGTAGCTATCGCCAGGGAAGGCCAGACG TTGAGGCTTGTTGGTAGGGCTCAACTTCCATGTTGCCGAATGCACTGTAA TTTGTACTTGCCAGTATCTCCGGCCCTCCCTCAAAGACTCTACTCTTTCA CTGTCCAATTCGACTTGAAATCGTCTCGAAATCGTCCCTGTTCAGATGTT TACTGTGGTCAAGATCATTAAGTCCGGGTTTGTGGCGGGGGTCCCAACGG ATCTTGTGAGCAAGGTTGCCCCGGCGATCGAGGCACACTTCGAGACGGTC AGCAAGCACCCGAAGGTAAGTTCTTGA
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig1013:241235..244561-

>mRNA_D-dichotoma_M_contig1013.209.1 ID=mRNA_D-dichotoma_M_contig1013.209.1|Name=mRNA_D-dichotoma_M_contig1013.209.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1278bp|location=Sequence derived from alignment at D-dichotoma_M_contig1013:241235..244561- (Dictyota dichotoma ODC1387m male)
ATGTCTCTCTGTCTCACCTACTTCCAGCTAAGCGGGCGTGCCGAACCCAC
TCGCTTGGCGTTCTACATTGGTGGTGTGAAGTTCGAAGACAAACGCATCA
GTTTTCCAGAGTTCCCGGAGCTCCGACCGAAGACTCCGTTTAATGCGCTT
CCTACACTCGAGATGTCTCTCTGTCTCACCTACTTCCAGCTAAGCGGGCG
TGCCGAACCCACTCGCTTGGCGTTCTACATTGGTGGTGTGAAGTTCGAAG
ACAAACGCATCAGTTTTCCAGAGTTCCCGGAGCTCCGACCGAAGACTCCG
TTTAATGCGCTTCCTACACTCGAGGTCGAAGGAGGAATCTACGGACAGTC
AACTGCGTTACTTCGATATGCCGGGAAACGGTCCAACCTGTACCCTGATG
ATGCGTTGACGGCTCTCAAGGTCGAAGGAGGAATCTACGGACAGTCAACT
GCGTTACTTCGATATGCCGGGAAACGGTCCAACCTGTACCCTGATGATGC
GTTGACGGCTCTCAAGGTCGACGAGATTGTTATGGCAGGAGAGGATGCTG
TCATTATGCTTTTCGGGACCCTGAAACTCGACGCGGACACTGCGGTCGAC
GAGATTGTTATGGCAGGAGAGGATGCTGTCATTATGCTTTTCGGGACCCT
GAAACTCGACGCGGACACTGCGGCAAATTCTGATGGTGCATGTTTTCCAT
GTATGATATGCCTACAGAAGATCAAGCGAGCTGAACTCGCGGAGGGTGCC
CTCAAGGAACTGCTGGAGAGGATCGAAGCCAAGCTGAAGTGCAACTCCTC
ACCATACTTTGTTGGCGACTCTATCACGATCGCTGACCTCCAGGCAAATT
CTGATGGTGCATGTTTTCCATGTATGATATGCCTACAGAAGATCAAGCGA
GCTGAACTCGCGGAGGGTGCCCTCAAGGAACTGCTGGAGAGGATCGAAGC
CAAGCTGAAGTGCAACTCCTCACCATACTTTGTTGGCGACTCTATCACGA
TCGCTGACCTCCAGATGTTTACTGTGGTCAAGATCATTAAGTCCGGGTTT
GTGGCGGGGGTCCCAACGGATCTTGTGAGCAAGGTTGCCCCGGCGATCGA
GGCACACTTCGAGACGGTCAGCAAGCACCCGAAGGTAAGTTCTTGAATGT
TTACTGTGGTCAAGATCATTAAGTCCGGGTTTGTGGCGGGGGTCCCAACG
GATCTTGTGAGCAAGGTTGCCCCGGCGATCGAGGCACACTTCGAGACGGT
CAGCAAGCACCCGAAGGTAAGTTCTTGA
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