mRNA_D-dichotoma_M_contig1013.200.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Match: A0A6H5K6U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6U1_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 4.690e-14 Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 3 Query: 618 PSAEMRLLQQAREEARAVAQANGCGRRARAPSLKALQAAGLLDGDGAQVMTKAREQEEIRRSKERREQWRAGVAVGLRVGEVLEVLAPNG 887 PS EMRLLQ+AR+ ARA A+A+G GRRARAPS K L+A+G + G+ AQ MT+ +++E+ R S + +EQ +A A GL+ GEV+E G Sbjct: 9 PSDEMRLLQEARDSARAAAEASGYGRRARAPSRKFLEASGKIVGESAQWMTREKKEEQARLSLQLKEQRKAAAAAGLKPGEVIEAATAAG 98
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Match: A0A6H5JZ47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ47_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 3.270e-12 Identity = 35/56 (62.50%), Postives = 38/56 (67.86%), Query Frame = 3 Query: 126 REARCEYDGCFRTARYGPREGPMSFCQDHKRAGMYTSRNGRWLVATNDGNAFRQDA 293 R RCEY GC T RYGPR G SFCQ HKRAGMYT R+G +AT DG FR+ A Sbjct: 100 RAQRCEYAGCDGTPRYGPRNGLQSFCQGHKRAGMYTYRSGELFMATRDGRVFRKAA 155
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 2.050e-11 Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 3 Query: 609 GGAPSAEMRLLQQAREEARAVAQANGCGRRARAPSLKALQAAGLLDGDGAQVMTKAREQEEIRRSKERREQWRAGVAVGLRVGEVLE 869 G APS EM +L+QARE A+ A+A+G GRRARAPS +AL+A+G L GDGAQ MT+ ++ E+ R + E RE+ + GL+VG VLE Sbjct: 274 GMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLE 360
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 3.360e-11 Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 3 Query: 609 GGAPSAEMRLLQQAREEARAVAQANGCGRRARAPSLKALQAAGLLDGDGAQVMTKAREQEEIRRSKERREQWRAGVAVGLRVGEVLEVLAPNGT 890 G APS E +L+QARE+A+ A+A+G GRR RAPS +AL+AAG L G GAQ M++ ++ E++R E R+Q + A GL+ G VLE+ P T Sbjct: 220 GMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEAT 313
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 1.460e-10 Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 111 PEIDLREARCEYDGCFRTARYGPREGPMSFCQDHKRAGMYTSRNGRWLVATNDGNAFRQDASGHGHV 311 P + R C++ GC RT RYG + GP++ CQ HKRAG+YT R+G LVAT DG+AFR+ A V Sbjct: 175 PAVASRTEYCKHTGCTRTPRYGRKNGPLTLCQSHKRAGLYTVRDGVLLVATRDGSAFREKAGSSSSV 241
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 3.010e-10 Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 3 Query: 609 GGAPSAEMRLLQQAREEARAVAQANGCGRRARAPSLKALQAAGLLDGDGAQVMTKAREQEEIRRSKERREQWRAGVAVGLRVGEVLEVLAP--NGTVEAG 902 G APS E +L+QARE+A+ A+A+G GRR RAPS +AL+AAG L G GAQ M++ ++ E++R E R Q + A GL+ G VLE+ P GT AG Sbjct: 458 GMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAG 557
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 4.760e-10 Identity = 46/87 (52.87%), Postives = 61/87 (70.11%), Query Frame = 3 Query: 609 GGAPSAEMRLLQQAREEARAVAQANGCGRRARAPSLKALQAAGLLDGDGAQVMTKAREQEEIRRSKERREQWRAGVAVGLRVGEVLE 869 G +PS EM +L+QARE A+ A+A+G GRRARAPS +AL+A+G L GDGAQ MT+ + E+ R + E RE+ + GL VG VLE Sbjct: 374 GMSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLE 460
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.210e-9 Identity = 49/100 (49.00%), Postives = 65/100 (65.00%), Query Frame = 3 Query: 609 GGAPSAEMRLLQQAREEARAVAQANGCGRRARAPSLKALQAAGLLDGDGAQVMTKAREQEEIRRSKERREQWRAGVAVGLRVGEVLEVLAP--NGTVEAG 902 G APS E +L+QARE A+ A+A+G GRR RAPS +AL+AAG L G GAQ M++ ++ E++R E R Q + A GL+ G VLE+ P GT AG Sbjct: 459 GMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATGTEAAG 558
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Match: D8LH38_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH38_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 1.160e-8 Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 111 PEIDLREA-RCEYDGCFRTARYGPREGPMSFCQDHKRAGMYTSRNGRWLVATNDGNAFRQD 290 P + L +A +C++ C T RYG +GP++FC+ HKRAGMYT+R+G VAT DG+AFR+D Sbjct: 72 PVVVLEQAVQCQHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGSAFRKD 132
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Match: A0A6H5KL62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL62_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 2.400e-8 Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 3 Query: 126 REARCEYDGCFRTARYGPREGPMSFCQDHKRAGMYTSRNGRWLVATNDGNAFRQDAS 296 R C++ GCFR RYG + GP+ CQ HKRAG+YT R+G LVAT DG+ + S Sbjct: 173 RTEYCKHAGCFRALRYGRKNGPLMLCQSHKRAGLYTVRDGVLLVATRDGSGRSSEGS 229 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1013.200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1013.200.1 >prot_D-dichotoma_M_contig1013.200.1 ID=prot_D-dichotoma_M_contig1013.200.1|Name=mRNA_D-dichotoma_M_contig1013.200.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=285bp MFHPEIDLREARCEYDGCFRTARYGPREGPMSFCQDHKRAGMYTSRNGRWback to top mRNA from alignment at D-dichotoma_M_contig1013:82528..89384- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1013.200.1 ID=mRNA_D-dichotoma_M_contig1013.200.1|Name=mRNA_D-dichotoma_M_contig1013.200.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=6857bp|location=Sequence derived from alignment at D-dichotoma_M_contig1013:82528..89384- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1013:82528..89384- >mRNA_D-dichotoma_M_contig1013.200.1 ID=mRNA_D-dichotoma_M_contig1013.200.1|Name=mRNA_D-dichotoma_M_contig1013.200.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1710bp|location=Sequence derived from alignment at D-dichotoma_M_contig1013:82528..89384- (Dictyota dichotoma ODC1387m male)back to top |