mRNA_D-dichotoma_M_contig1012.196.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 372 bits (954), Expect = 1.280e-126 Identity = 182/263 (69.20%), Postives = 207/263 (78.71%), Query Frame = 1 Query: 1 RQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETAGDYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANGRPDPSHDFDGKIGIWCICVMKTAERSSKK-------------------RKRG----EEYESDCTIDAEWYKTWYIDQLLPAIKKKMPWLRSKRVVVQQDGVSPHTGKNNPEILH*AGMGRGWMVELVTQPAQSPDLNVNDLGFFASLK 720 RQVSDQL +GL++ TVRRWF+ GA K RIKPSLSDAQK+ R+DFI D+VDE G+YLD GNV+HLDESWF+L+R+KEKVR+F GE++PG PRV H+S LPK MVIVAN RPDP+HDFDGKIGIW ICV++TA+RSSKK R R EEYE DCTIDAEWYK WYID LLPAIK+KMPWLRSKRVVVQQDG SPHTGK NPEIL+ AG+ RGW+VELVTQPAQSPDLN+NDLG FASLK Sbjct: 87 RQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLK 349
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Match: A0A6G0X1B6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1B6_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.570e-37 Identity = 86/238 (36.13%), Postives = 128/238 (53.78%), Query Frame = 1 Query: 43 SSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETAG-------DYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANGRP--DPSHD--FDGKIGIWCICVMKTAERSSKKRKRGEEYESDCTIDAEWYKTWYIDQLLPAIKKKMPWLRSKRVVVQQDGVSPHTGKNNPEILH*AGMGRGWMVELVTQPAQSPDLNVNDLGFFASLKS 723 S+ T+ R+ + R+KP L+D K++R+ F C VD +A D+ DM +V+HLDE WF +D+ KV + +E P R + K +PK M + A RP D + FDGKIG+W V A R S+ R G C + AE Y+ + +++++PA+K +MP SK VV+Q D +PH ++ + GW + QP SPDLNV DLGFFAS+++ Sbjct: 8 STGTLARYLKLGTLQRKSSRLKPLLNDQNKRQRLWFCCSHVDRSAHAGAQQEFDFFDMFDVVHLDEKWFNADKDRRKVYLTK-DEAPEVRRCKSKRFIPKVMFLAAVARPRWDNARSCFFDGKIGMWPFVVQVPAARGSRNRPAGTMVTKVCNVTAEAYRDFVVNKVIPAVKSEMP-STSKCVVLQHDNATPHRSVDDAVLS--PCCTDGWTFRVSCQPPNSPDLNVLDLGFFASIQA 241
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 142 bits (358), Expect = 4.920e-37 Identity = 74/215 (34.42%), Postives = 125/215 (58.14%), Query Frame = 1 Query: 100 RIKPSLSDAQKKRRIDFICDQVDETAGD---YLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANGRP--DPSHD--FDGKIGIWCICVMKTAERSSKKRKRGEEYESDCTIDAEWYKTWYIDQLLPAIKKKMPWLRSKRVVVQQDGVSPHTGKNNPEILH*AGMGRGWMVELVTQPAQSPDLNVNDLGFFASLKS 723 R+KP L+D K R+ F+ + A + DM + +H+DE WF++ + + ++ E +P + + + K + K M + A RP D + +DG+IG+W + A RSSK RKRG++ T+ + Y+++ ID+++PA++ K P + ++ +QQD PH N+P ++ AG GW + L +QPAQSPDLNV DLG+F +++S Sbjct: 7 RLKPMLTDKHKSDRMAFVQRHLRTGASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLWSDEAVP-TRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVVA-AGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQS 219
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Match: A0A6G0WM27_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM27_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.110e-36 Identity = 87/248 (35.08%), Postives = 131/248 (52.82%), Query Frame = 1 Query: 1 RQVSDQLKAIGLDYSSSTVRRWFAAEGAHK-VVRRIKPSLSDAQKKRRIDFICDQVDETAGDYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANGRPDPSHD------FDGKIGIWCICVMKTAERSSKKRKRGEEYESDCTIDAEWYKTWYIDQLLPAIKKKMPWLRSKRVVVQQDGVSPHTGKNNPEILH*AGMGRGWMVELVTQPAQSPDLNVNDLGFFASLKS 723 RQ S L A +T+ R EG K R++P L++ K R++F V E +++DM NV+H+DE WF L + K ++ EE+P + K+ + K M + A RP HD FDGK+G+W + + A+R+SK R R + ++ +E Y + +LPAIK+KM ++++ ++ +QQD PH+ N G GW V L QPA SPD NV DLGFF S++S Sbjct: 112 RQTSRSL-AHNSGIPKTTIFRHMKKEGRLKRASSRLRPLLTEVNMKARLEFAMSFVKEDR-EFVDMHNVVHVDEKWFDLTKVNGKFYVYDDEELPLR-ATKSKNFITKVMFLAAVARP--RHDEATNQFFDGKLGMWPFVIQEPAKRTSKNRARDTLISTPISVTSEVYFDMLVSNVLPAIKRKMSFMKNSKIFIQQDNAGPHSKSVNHRFNQ-VGSYDGWNVALKNQPANSPDFNVLDLGFFNSIQS 353
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Match: A0A6A4ECW5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4ECW5_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.720e-35 Identity = 92/249 (36.95%), Postives = 131/249 (52.61%), Query Frame = 1 Query: 1 RQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQV--DETAGDYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANGRPDPSHD----FDGKIGIWCICVMKTAERSSKKRKRGE-EYESDCTIDAEWYKTWYIDQLLPAIKKKMP-WLRSKRVVVQQDGVSPHTGKNNPEILH*AGMGRGWMVELVTQPAQSPDLNVNDLGFFASLKS 723 R+V+ Q A L S VR + I P L+ A K RI V ++ M NV+H+DE WF +DK+ + PGE +P R + K + K M + A RP ++ FDGKIGIW A+ SSK R G E ++ T++ E YK + ++ ++PAIK K P W +S +V+QQD +PH +P+IL AG+ GW + L QPA SPDLN DLG+FAS+++ Sbjct: 125 RRVTQQCLAQELGVGRSVVRDALKQGLLVRHSSTIHPLLTLANKHARIRHAIRHVMHGPNGSYFVPMYNVVHVDEKWFNEDKDKKVFYLLPGETVPHRER-KSKRFIGKTMFLAAVARPRFDNNGQVLFDGKIGIWDFTHKVDAQHSSKNRPAGTLETKNLDTVNREVYKRYLLEHIIPAIKSKWPVWDKSSPIVIQQDNATPHCQPTDPDILA-AGVADGWNIRLAFQPANSPDLNTLDLGYFASIQA 371
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Match: UPI0019D4F374 (uncharacterized protein LOC120667773 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D4F374) HSP 1 Score: 139 bits (350), Expect = 9.380e-35 Identity = 81/243 (33.33%), Postives = 130/243 (53.50%), Query Frame = 1 Query: 25 AIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETA-GD----YLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANGRPDPSHD----FDGKIGIWCICVMKTAERSSKKRKRGEEYESDCTIDAEWYKTWYIDQLLPAIKKKMPWLRS-KRVVVQQDGVSPHTGKNNPEILH*AGMGRGWMVELVTQPAQSPDLNVNDLGFFASLKS 723 A LD ST+ R F + +KP L ++ K+ R+ F +D+T+ GD ++DM N++H+DE W+++ + K + P E+ P +Q+K+++ K M++ GRP + F GKIG+W A R SKKR+RG ++ E + + I++++PAIK K P + + + +QQD H N+P L A G + L+ QP SPD+NV DLGFF S++S Sbjct: 179 AKSLDVGISTLHRKFKLGLLRRHSNTLKPHLKESNKRERLQFCISMLDQTSLGDAEPRFIDMQNILHMDEKWYYMTKKARKYYLLPEEDDPER-TIQNKNNIGKVMLLTVVGRPRRNAQGIVMFSGKIGVWAFVKEVPAARRSKKRERGTLETKSVIVNREVMRQFLIEKVIPAIKSKWPQDAALETIFIQQDNARTHVSPNDPAFLQ-AVAATGLDIGLMQQPPNSPDMNVLDLGFFRSIQS 419
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.580e-34 Identity = 93/246 (37.80%), Postives = 136/246 (55.28%), Query Frame = 1 Query: 28 IGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRI----DFICDQVDET------AGDYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANGRPDPSHD----FDGKIGIWCICVMKTAERSSKKRKRGEEYESDCTIDAEWYKTWYIDQLLPAIKKKMPWLRSKRVVVQQDGVSPHTGKNNPEILH*AGMGRGWMVELVTQPAQSPDLNVNDLGFFASLKS 723 +GL Y+ T+ R A + + PSL+DA K +R+ F+ ++ +T A + M + IHLDE WFFL +DK + GEE+P S +HKS +PK M + A GRP H FDGK+GI+ + TA+RSS+ + +G T+ + Y ++ +LPAI K P R K + +QQDG PH PE++ A G ++LVTQPA SPDLN+ DLGFFA++++ Sbjct: 88 VGLPYT--TLFRKLKAGVIRRATSTLSPSLTDACKYKRLLHCLSFL--RLSKTTRSCPAAFKFHAMLDWIHLDEKWFFLDKDKRTFYLVKGEELP-SRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFP-SRWKTLYIQQDGARPHCTDGCPELVASAA-SFGLNIKLVTQPANSPDLNILDLGFFAAIQT 326
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Match: A0A485KSH5_9STRA (Aste57867_11065 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSH5_9STRA) HSP 1 Score: 136 bits (342), Expect = 5.170e-34 Identity = 91/262 (34.73%), Postives = 129/262 (49.24%), Query Frame = 1 Query: 1 RQVSDQLKAIGLDYSSST------VRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETAGD-----------YLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANGRP----DPSHDFDGKIGIWCICVMKTAERSSKKRKRGEEYESDCTIDAEWYKTWYIDQLLPAIKKKMPWLRSKRVVVQQDGVSPHTGKNNPEILH*AGMGRGWMVELVTQPAQSPDLNVNDLGFFASLKS 723 ++V ++ ++ D S +T + R + R+KP LSD K RI F V A D + DM + +HLDE WF D+ KV + PGEE P + K LPK M + P + +FDGKIG+W I A R+S+ R G IDA Y + +++++PAIK+K P +KRVV+Q D +PH+ + + GW + QPAQSPDLNV DLGFFAS++S Sbjct: 88 QEVPEEQRSTMRDISEATGLSVGMIHRNLKTGAIERQSTRLKPLLSDEHKLERITFCKSYVRREAPDTIALLAGQEFEFFDMWDAVHLDEKWFNADIDRRKVYLVPGEE-PKRRACKFKRFLPKVMFLAVVAHPRFNIEGECEFDGKIGLWPIVKYAPAIRNSRNRAAGTIEAKSINIDAVVYLDFVVNKVIPAIKRKFP-SSNKRVVLQHDNATPHSSVTTASLSRVST--DGWKFVVKCQPAQSPDLNVLDLGFFASIQS 345
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Match: W4GF08_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GF08_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.370e-34 Identity = 75/232 (32.33%), Postives = 131/232 (56.47%), Query Frame = 1 Query: 49 STVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQV-DETAGD--YLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANGRP--DPSHD--FDGKIGIWCICVMKTAERSSKKRKRGEEYESDCTIDAEWYKTWYIDQLLPAIKKKMPWLRSKRVVVQQDGVSPHTGKNNPEILH*AGMGRGWMVELVTQPAQSPDLNVNDLGFFASLKS 723 +T+ R ++ + R+KP +D K R+ F+ + E +G + DM + +H+DE WF++ + + ++ + +P + + + K D+ K M + A RP D + +DG+IG+ + A RSSK RKRG++ T+ + Y ++ ID+++PA++ K P ++ +QQD PH N+P ++ AG GW + L +QPAQSPDLNV DLG+F +++S Sbjct: 115 TTLWRLLQSKVMKRCTSRLKPMQTDKHKSDRMAFVQRHLRTEASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLWSDKAVP-TRKCRSKMDIMKVMFLTAVARPRYDARNKRMWDGRIGMRPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYPSFLIDKVIPAVRSKWPSSMKNQIWIQQDNAKPHVSVNDPAVIA-AGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQS 344
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.330e-33 Identity = 83/227 (36.56%), Postives = 123/227 (54.19%), Query Frame = 1 Query: 85 HKVVRR---------IKPSLSDAQKKRRIDFICDQVDETAGDYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANGRP--DPSHD--FDGKIGIWCICVMKTAERSSKKRKRGEEYESDCTIDAEWYKTWYIDQLLPAIKKKMPWLRSK-RVVVQQDGVSPHTGKNNPEILH*AGMGRGWMVELVTQPAQSPDLNVNDLGFFASLKS 723 H++VRR KP L+ K +R+++I + +D+ G + D IH+DE WF+L R K+ + PGE P S + K+ + K M + A RP D ++ FDGKIGIW V + A+RSS R +G +D E YK ++++LPAI +K P S + +Q+D PH E+ A +GW + + TQP SPD+NV DLGFF S++S Sbjct: 218 HRLVRRGDMRKHNGTTKPLLTAKNKLKRVEWILEHIDDN-GRFDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTS-KSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKATIREEVKA-AAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQS 441 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1012.196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1012.196.1 >prot_D-dichotoma_M_contig1012.196.1 ID=prot_D-dichotoma_M_contig1012.196.1|Name=mRNA_D-dichotoma_M_contig1012.196.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=143bp MGNVIHLDESWFFLLRDKEKVRMFPGEEIPGSPRVQHKSDLPKKMVIVANback to top mRNA from alignment at D-dichotoma_M_contig1012:214009..214731+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1012.196.1 ID=mRNA_D-dichotoma_M_contig1012.196.1|Name=mRNA_D-dichotoma_M_contig1012.196.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=723bp|location=Sequence derived from alignment at D-dichotoma_M_contig1012:214009..214731+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1012:214009..214731+ >mRNA_D-dichotoma_M_contig1012.196.1 ID=mRNA_D-dichotoma_M_contig1012.196.1|Name=mRNA_D-dichotoma_M_contig1012.196.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=858bp|location=Sequence derived from alignment at D-dichotoma_M_contig1012:214009..214731+ (Dictyota dichotoma ODC1387m male)back to top |