mRNA_D-dichotoma_M_contig1012.194.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE) HSP 1 Score: 441 bits (1134), Expect = 1.300e-125 Identity = 258/530 (48.68%), Postives = 323/530 (60.94%), Query Frame = 2 Query: 515 ALIGNLRNRLPLSRLKIVIVVWQILTAFSEITQVPMPYVYKSFLNAVGIFTFDLGWIFSAACLTDGLNFYDKLLIVTLGPVFMLAFLGLTFYLGARRHRQLLPPPAGASENGSVSRGRASELRPTRLDSAVVNFREAFSGVPLAQPPSQGSSIQQGVSHGQKPGNPRASEGERKDAREGVSSLRSLIPWMVGDRGQGAQVHDVHGPPSGSDSNGAHAVGDCRTSPASWISRKSGVHLPGPDGHEDPEKSELWWLFARHMTIVLIVFYLIYSEVSTVVFQTFVCQDLSEIGKSYLRADLSLECYTSTHHAYRVYAGLMIFIYPLGIPVAFFYFLMRQRLSINPTVDSPRQGLTKER----ILFEKLKRRSHDQTVAPTSVLWVAYFPNRYYYEVCECMRRLFLTGLMVFFLADTSGQVAIGCLIAFVSLIMFELLRPHVDPLDIQLYRAGCVVVFFSNFLALMIKAEVADVDSSSANIYAVVLVLVNVLMFLSIFWNIWASTEALLSRDHFQGEVLGFDLIDEERLKKLIG 2092 A IG + RLPLS+LKIVIVVWQI AF+EIT+VP P VY+ FL+ +GIF+FDLGW+ SAACLT G++FYDKLLIVT+GPV +L LG TFYLGAR P G + S SR AS+ + SA V EA+ G + R RG R V GP D E++ LW LFARH T++LI+ YL+YS+VSTVVFQ F C+D EIGKS+LRAD +EC T H Y++YA +MI IYPLGIP AF+YFL RQR INP D +GL +R ++ EK+ +R D+ +APTS LW AY+PNRYYYEV ECMRRL LTGL+VF + DT GQVA GC+ AF+SL+ FELLRPH D LD+QLYR GC+V+FF+NFLALMIKA VA+ DS + +Y+VVL++VNVL FLSIFWN WA+ +A SR H +LG D+++E++L K+IG Sbjct: 1405 ARIGEMLARLPLSKLKIVIVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGAR------PVRKGRIVDMS-SRSTASDS----VSSATVATLEAYDS------------------------------GSSRSVRPQXXXXXXXXXXXXXARGTXXXXXXXXXXXXXXXXXXXXXXXXXRARQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTD---KGLKDQRGRKHVVEEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVANPDSRGSAVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDM--MLGVDIVNEKQLDKIIG 1888
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 414 bits (1065), Expect = 2.900e-117 Identity = 234/528 (44.32%), Postives = 317/528 (60.04%), Query Frame = 2 Query: 521 IGNLRNRLPLSRLKIVIVVWQILTAFSEITQVPMPYVYKSFLNAVGIFTFDLGWIFSAACLTDGLNFYDKLLIVTLGPVFMLAFLGLTFYLGARRHRQLLPPPAGASENGSVSRGRASELRPTRLDSAVVNFREAFSGVPLAQPPSQGSSIQQGVSHGQKPGNPRASEGERKDAREGVSSLRSLIPWMVGDRGQGAQVHDVHGPPSGSDSNGAHAVGDCRTSPASWISRKSGVHLPGPDGHEDPEKSELWWLFARHMTIVLIVFYLIYSEVSTVVFQTFVCQDLSEIGKSYLRADLSLECYTSTHHAYRVYAGLMIFIYPLGIPVAFFYFLMRQRLSINPTVDSPRQGLTKER----ILFEKLKRRSHDQTVAPTSVLWVAYFPNRYYYEVCECMRRLFLTGLMVFFLADTSGQVAIGCLIAFVSLIMFELLRPHVDPLDIQLYRAGCVVVFFSNFLALMIKAEVADVDSSSANIYAVVLVLVNVLMFLSIFWNIWASTEALLSRDHFQGEVLGFDLIDEERLKKLIG 2092 + NL LPLS+LKIVIVVWQI +AF++IT+ P P +Y+ FL+ +GIF+FDLGWI SAACLT G++FYDKLLIVT+GP+ L FLG+TF++G+R ++ P + +G S EL R+ A SG + + G++ ARE S+RS + GDR ++PE+ LW LFARH T++LIV YL+Y+++STVVFQTF C+ L EIGK YLRAD +EC T H Y+ YAG+M+ IYPLGIP F YFL+RQR INP D + L K R ++ K+ R DQ++APTS LW AYFP YYYEV EC+RRL LTG++VF + DT GQVA C+ A +SL++FELLRPHV+ +D QLYR GC+V+ F+NFLAL+IK+ AD DSS + Y+V LV+VN++ FLSI++N + +A+ SR H Q +LG D++DE + +++G Sbjct: 1252 VANLLAALPLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAKETNMSPNATTADGGASGSGGRELEEGRVQGAC-------SGSTTSVTANSGAA-----------------------ARE--PSVRSALRAKSGDR-------------------------------------------------KNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTD---EALKKRRGGRHVVERKMTVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHIDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQDMLLGVDIVDESTINQVLG 1695
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI) HSP 1 Score: 404 bits (1038), Expect = 3.390e-114 Identity = 233/528 (44.13%), Postives = 310/528 (58.71%), Query Frame = 2 Query: 521 IGNLRNRLPLSRLKIVIVVWQILTAFSEITQVPMPYVYKSFLNAVGIFTFDLGWIFSAACLTDGLNFYDKLLIVTLGPVFMLAFLGLTFYLGARRHRQLLPPPAGASENGSVSRGRASELRPTRLDSAVVNFREAFSGVPLAQPPSQGSSIQQGVSHGQKPGNPRASEGERKDAREGVSSLRSLIPWMVGDRGQGAQVHDVHGPPSGSDSNGAHAVGDCRTSPASWISRKSGVHLPGPDGHEDPEKSELWWLFARHMTIVLIVFYLIYSEVSTVVFQTFVCQDLSEIGKSYLRADLSLECYTSTHHAYRVYAGLMIFIYPLGIPVAFFYFLMRQRLSINPTVDSPRQGLTKER----ILFEKLKRRSHDQTVAPTSVLWVAYFPNRYYYEVCECMRRLFLTGLMVFFLADTSGQVAIGCLIAFVSLIMFELLRPHVDPLDIQLYRAGCVVVFFSNFLALMIKAEVADVDSSSANIYAVVLVLVNVLMFLSIFWNIWASTEALLSRDHFQGEVLGFDLIDEERLKKLIG 2092 + NL LPLS+LKIVI +IT+ P P +Y+ FL+ +GIF+FDLGWI SAACLT G++FYDKLL+VT+GP+ L FLG+TF++G+R ++ P + G+ S R E+ R+ +G SS +G G A+ V + + KSG ++PE+ LW LFARH TI+LIV YL+Y+++STVVFQTF C+DL EIGKSYLRAD +EC T H Y+ YAG+MI IYPLGIP FFYFL+RQR INP D + L K R + +K+ R DQ++APTS LW AYFP YYYEV EC+RRL LTG++VF + DT GQVA C+ A VSL++FELLRPHV+ LD QLYR GC+V+ F+NFLAL+IK+ AD DSS + Y+V LV+VN++ FLSI++N A+T+A+ SR H Q +LG D++DE + K++G Sbjct: 1029 VANLLTALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLMVTIGPLLPLCFLGITFFVGSRPAKKTNMSPNTTAGGGATSGSRVGEVEEGRV--------------------------------------------------QGASSRSMASVMAIG--GATARAQSVR----------------------NLLRAKSGQQ-------KNPEQERLWGLFARHTTIMLIVLYLVYTQISTVVFQTFSCEDLPEIGKSYLRADFRIECDTQRHTLYKAYAGVMICIYPLGIPAIFFYFLVRQRSRINPPTD---EALKKRRGGRHVAEQKMTVRDQDQSIAPTSFLWSAYFPTCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAIVSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACATTKAMFSRSHAQDMLLGVDVVDESTINKVLG 1462
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 376 bits (965), Expect = 5.410e-104 Identity = 227/530 (42.83%), Postives = 292/530 (55.09%), Query Frame = 2 Query: 515 ALIGNLRNRLPLSRLKIVIVVWQILTAFSEITQVPMPYVYKSFLNAVGIFTFDLGWIFSAACLTDGLNFYDKLLIVTLGPVFMLAFLGLTFYLGARRHRQLLPPPAGASENGSVSRGRASELRPTRLDSAVVNFREAFSGVPLAQPPSQGSSIQQGVSHGQKPGNPRASEGERKDAREGVSSLRSLIPWMVGDRGQGAQVHDVHGPPSGSDSNGAHAVGDCRTSPASWISRKSGVHLPGPDGHEDPEKSELWWLFARHMTIVLIVFYLIYSEVSTVVFQTFVCQDLSEIGKSYLRADLSLECYTSTHHAYRVYAGLMIFIYPLGIPVAFFYFLMRQRLSINPTVDSPRQGLTKER----ILFEKLKRRSHDQTVAPTSVLWVAYFPNRYYYEVCECMRRLFLTGLMVFFLADTSGQVAIGCLIAFVSLIMFELLRPHVDPLDIQLYRAGCVVVFFSNFLALMIKAEVADVDSSSANIYAVVLVLVNVLMFLSIFWNIWASTEALLSRDHFQGEVLGFDLIDEERLKKLIG 2092 A IG + RLPLS+LKIV+VVWQI AF+EIT+VP P VY+ FL+ +GIF+FDLGW+ SAACLT G++FYDKLL RG+ + R A + A+ QG + R AR V GP D E++ LW LFARH T++LI+ YL+Y++VSTVVFQ F C+D EIGKS+LRAD +EC T H Y++YA +MI I +F+YFL RQR INP D +GL +R ++ EK+ +R D+ +APTS LW AY+PNRYYYEV ECMRRL LTGL+VF + DT GQVA GC+ AF+SL+ FELLRPH D LD+QLYR GC+V+FF+NFLALMIKA VA DS + +Y+VVL++VNVL FLSIFWN WA+ +A SR H Q +LG D+++E++L K+IG Sbjct: 1295 ARIGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLL-----------------------------------------RGKGAS-------------RTAMAAAAAAERARQGRA--------------------RPSARR--------------------------------------------------------VWRNGPGDESDLEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICI-------SFWYFLTRQRSRINPPTD---KGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHVQDMMLGVDIVNEKQLDKIIG 1684
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Match: A0A6H5JI42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI42_9PHAE) HSP 1 Score: 335 bits (858), Expect = 2.020e-95 Identity = 218/530 (41.13%), Postives = 285/530 (53.77%), Query Frame = 2 Query: 506 TTIALIGNLRNRLPLSRLKIVIVVWQILTAFSEITQVPMPYVYKSFLNAVGIFTFDLGWIFSAACLTDGLNFYDKLLIVTLGPVFMLAF-LGLTFYLGARRHRQLLPPPAGASENGSVSRGRASELRPTRLDSAVVNFREAFSGVPLAQPPSQGSSIQQGVSHGQKPGNPRASEGERKDAREGVSSLRSLIPWMVGDRGQGAQVHDVHGPPSGSDSNGAHAVGDCRTSPASWISRKSGVHLPGPDGHEDPEKSELWWLFARHMTIVLIVFYLIYSEVSTVVFQTFVCQDLSEIGKSYLRADLSLECYTSTHHAYRVYAGLMIFIYPLGIPVAFFYFLMRQRLSINPTVDSPRQGLTKERILFEKLKRRSHDQTVAPTSVLWVAYFPNRYYYEVCECMRRLFLTGLMVFFLADTSGQVAIGCLIAFVSLIMFELLRPHVDPLDIQLYRAGCVVVFFSNFLALMIKAEVADVDSSSANIYAVVLVLVNVLMFLSIFWNIWASTEALLSRDHFQGEVLGFDLIDEERLKKLIG 2092 T IG + RLPLS+ AF+EIT+VP P VY+ FL+ +G F+F LGW+ SAACLT G +FYDKLL+ + + A+ G++ G+ R R AGAS+ +RG S TR R A + RA +G + + V W S GP D E++ LW LFARH T++LI+ YL+YS+VSTVVFQ F C+D EIGKS+LRAD +EC H+ Y++YA +MI IYPLGIP AF YFL RQ INP D + + EK+ +R D+ +APTS LW AY+P+RYYYEV EC RRL LTGL+VF + DT GQVA GC+ AF+SL++FELLRPH D LD+QLYR GC+V+F +N LA VA S S +Y++VL++VNVL LSIF N WA+ +A SR H VLG D+++E+ L K+IG Sbjct: 191 TAAVRIGEMLARLPLSK-------DCRRCAFAEITKVPFPPVYEKFLSIIGTFSFGLGWVISAACLTAGNDFYDKLLVSSATAATLAAYDSGIS---GSVRTR------AGASD---PARGTTSTTATTRRGKGPS--RTAXXXXXXXE---------------------RARQGRARPSARRV-----------------------------------------------WRS--------GPGDESDIEQNHLWELFARHTTMMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDKPKHYTYKIYAAVMICIYPLGIPGAFCYFLARQMSRINPPTDKGLKNQRGRKHDAEKMNQRRTDRAIAPTSFLWNAYYPSRYYYEVIECFRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLVFELLRPHTDHLDMQLYRTGCLVIFLTNSLA-----NVASPCSRSCEVYSIVLIIVNVLFVLSIFGNTWAAAKASFSRRHDM--VLGVDIVNEKELDKIIG 616
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI) HSP 1 Score: 345 bits (886), Expect = 5.400e-95 Identity = 207/450 (46.00%), Postives = 261/450 (58.00%), Query Frame = 2 Query: 506 TTIALIGNLRNRLPLSRLKIVIVVWQILTAFSEITQVPMPYVYKSFLNAVGIFTFDLGWIFSAACLTDGLNFYDKLLIVTLGPVFMLAFLGLTFYLGARRHRQLLPPPAGASENGSVSRGRASELRPTRLDSAVVNFREAFSGVPLAQPPSQGSSIQQGVSHGQKPGNPRASEGERKDAREGVSSLRSLIPWMVGDRGQGAQVHDVHGPPSGSDSNGAHAVGDCRTSPASWISRKSGVHLPGPDGHEDPEKSELWWLFARHMTIVLIVFYLIYSEVSTVVFQTFVCQDLSEIGKSYLRADLSLECYTSTHHAYRVYAGLMIFIYPLGIPVAFFYFLMRQRLSINPTVDSPRQGLTKER----ILFEKLKRRSHDQTVAPTSVLWVAYFPNRYYYEVCECMRRLFLTGLMVFFLADTSGQVAIGCLIAFVSLIMFELLRPHVDPLDIQLYR 1843 T A IG + RLPLS+LKIV+VVWQI AF+E+T+VP P VY+ FL+ +GIF+FDLGW+ SAACLT G++FYDKLLIVT+GPV +L LG TFYLGAR V GR ++ +FR S + + ++ G+S G+ R G AR S+ G A V W + GP D E++ LW LFARH T++LI+ YL+Y++VSTVVFQ F C+D EIGKS+LRAD +EC T H Y+ YA MI IYPLGIP AF YFL RQ INP D +GL +R ++ EK+ +R D+ +APTS LW AY+PNRYYYEV EC+RRL LTGL+VF DT GQVA GC+ AF+SL++FELLRPH D LD+QLYR Sbjct: 943 TAAARIGEMLARLPLSKLKIVVVVWQISNAFAEVTKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGAR----------------PVRTGRVIDM----------SFRNNTSTSVSSATAATLAAYDSGIS-----GSVRPRAGASDSARGTASTTAXXXXXXXXXXXXXXXXXXXXXXXQGRARPSARRV---------WRN--------GPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKTYAAAMICIYPLGIPAAFCYFLTRQMSRINPPTD---KGLKNQRGRKHVVTEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECLRRLLLTGLLVFLAPDTPGQVAFGCVFAFLSLLVFELLRPHTDHLDMQLYR 1341
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI) HSP 1 Score: 268 bits (685), Expect = 2.510e-69 Identity = 180/524 (34.35%), Postives = 249/524 (47.52%), Query Frame = 2 Query: 521 IGNLRNRLPLSRLKIVIVVWQILTAFSEITQVPMPYVYKSFLNAVGIFTFDLGWIFSAACLTDGLNFYDKLLIVTLGPVFMLAFLGLTFYLGARRHRQLLPPPAGASENGSVSRGRASELRPTRLDSAVVNFREAFSGVPLAQPPSQGSSIQQGVSHGQKPGNPRASEGERKDAREGVSSLRSLIPWMVGDRGQGAQVHDVHGPPSGSDSNGAHAVGDCRTSPASWISRKSGVHLPGPDGHEDPEKSELWWLFARHMTIVLIVFYLIYSEVSTVVFQTFVCQDLSEIGKSYLRADLSLECYTSTHHAYRVYAGLMIFIYPLGIPVAFFYFLMRQRLSINPTVDSPRQGLTKERILFEKLKRRSHDQTVAPTSVLWVAYFPNRYYYEVCECMRRLFLTGLMVFFLADTSGQVAIGCLIAFVSLIMFELLRPHVDPLDIQLYRAGCVVVFFSNFLALMIKAEVADVDSSSANIYAVVLVLVNVLMFLSIFWNIWASTEALLSRDHFQGEVLGFDLIDEERLKKLIG 2092 + NL LPLS+LKIVI +IT+ P P +Y+ FL+ +GIF+FDLGWI SAACLT G++FYDKLLIVT+GP+ L FLG+TF++G+R ++ P + EL R+ A S GS+ S + A S+RS + GD ++PE+ LW LFARH TI+LIV YL+Y+++STV Q++S+ R DQ++APTS LW AYFP YYYEV EC+RRL LTG++VF + DT GQVA C+ A +SL++FELLRPHV+ LD QLYR GC+V+ F+NFLAL+IK+ AD DSS + Y+V LV+VN++ FLSI++N + +A+ SR H Q +LG D++DE + +++G Sbjct: 1069 VANLLAALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLFFLGITFFVGSRPAKETNMSPNATAGGXXXXXXXXRELEEGRVQGA-----------------SSGSTT---------------SVTSNRGAAARGPSVRSALRAKSGDP-------------------------------------------------KNPEQQRLWGLFARHTTIMLIVLYLVYTQISTV----------------------------------------------------------EQKMSV-----------------------RDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQDMLLGVDIVDESTINQVLG 1420
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI) HSP 1 Score: 229 bits (585), Expect = 2.980e-57 Identity = 159/524 (30.34%), Postives = 245/524 (46.76%), Query Frame = 2 Query: 539 RLPLSRLKIVIVVWQILTAFSEITQVPMPYVYKSFLNAVGIFTFDLGWIFSAACLTDGLNFYDKLLIVTLGPVFMLAFLGLTFYLGARRHRQLLPPPAGASENGSVSRGRASELRPTRLDSAVVNFREAFSGVPLAQPPSQGSSIQQGVSHGQKPGNPRASEGERKDAREGVSSLRSLIPWMVGDRGQGAQVHDVHGPPSGSDSNGAHAVGDCRTSPASWISRKSGVHLPGPDGHEDPEKSELWWLFARHMTIVLIVFYLIYSEVSTVVFQTFVCQDLSEIGKSYLRADLSLECYTSTHHAYRVYAGLMIFIYPLGIPVAFFYFLMRQRLSINPTVDS-----PRQGLTKERILF--------EKLKRRSHDQTVAPTSVLWVAYFPNRYYYEVCECMRRLFLTGLMVFFLADTSGQVAIGCLIAFVSLIMFELLRPHVDPLDIQLYRAGCVVVFFSNFLALMIKAEVADVDSSSANIYAVVLVLVNVLMFLSIFWNIWASTEALLSRDHF---QGEVLGFDLI 2062 RLP+ +LKI++VVWQIL+ F IT V P Y FL+ + + +FDLG + SA+C+ ++FY LL+ TLGP+ + L LT+++ RR AGA GS+ R A+W +RHM L++ +L++ ST+ F+TF C D + GKSYLRAD S++C+T H Y+VYAG+MI +YP+GIP+ + + L + R S+NP V + PR + +RI + EKL++R + + P+ LW + P YYYEV EC RR+ LTG++VF +T+ QVA C+ AFVSL+ FELLRPH+DP+D LYR GC+ +F SNFLAL+IK + + VD + +++ +++ +N+ + +++ W S + + D + G +L F+ + Sbjct: 1105 RLPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKRR--------AGAGSAGSLMRR------------------------------------------------------------------------------------------------------------AAW---------------------------SRHMAAGLLLSFLVFIATSTMAFKTFACDDEAVEGKSYLRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNPRVKTGAVVNPRADGSTDRITYKANSEDLEEKLEKRRRNPDLIPSMFLWKDFGPEIYYYEVVECGRRILLTGVLVFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCLCIFLSNFLALLIKVD-SGVDGNH-DVFGAIMIGINMFLIMAVLLASWFSMQQTM--DEYVVAAGTLLAFEQL 1481
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI) HSP 1 Score: 225 bits (573), Expect = 4.810e-56 Identity = 153/506 (30.24%), Postives = 232/506 (45.85%), Query Frame = 2 Query: 542 LPLSRLKIVIVVWQILTAFSEITQVPMPYVYKSFLNAVGIFTFDLGWIFSAACLTDGLNFYDKLLIVTLGPVFMLAFLGLTFYLGARRHRQLLPPPAGASENGSVSRGRASELRPTRLDSAVVNFREAFSGVPLAQPPSQGSSIQQGVSHGQKPGNPRASEGERKDAREGVSSLRSLIPWMVGDRGQGAQVHDVHGPPSGSDSNGAHAVGDCRTSPASWISRKSGVHLPGPDGHEDPEKSELWWLFARHMTIVLIVFYLIYSEVSTVVFQTFVCQDLSEIGKSYLRADLSLECYTSTHHAYRVYAGLMIFIYPLGIPVAFFYFLMRQRLSINPTVDSPR----QGLTKERI----------LFEKLKRRSHDQTVAPTSVLWVAYFPNRYYYEVCECMRRLFLTGLMVFFLADTSGQVAIGCLIAFVSLIMFELLRPHVDPLDIQLYRAGCVVVFFSNFLALMIKAEVADVDSSSANIYAVVLVLVNVLMFLSIFWNIWASTEALL 2017 LP+ +LKI++VVWQILT F IT V P Y FL+ + + D+G +F+A+CL ++FY +LL+ TL P+ G+ + L WM +R +G AS ++RK+ ++RHM L++ +L+++ ST+ F+TF C D + G+SYLRAD SL C T H YR+YAG+MI +YP+GIP+ + + L R S+NP V S G ++++ L E+L +R + + P+ LW + P+ YYYEV EC RR+ LTG+++FF A T+ Q A+ C+ AFVSL+ FELLRPH+DP D+ LYR GCV++F SNFLAL+IK + A + +A +L+ VNV + L++ W +T+ ++ Sbjct: 792 LPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWIDVVNLDVGHVFTASCLLPSVSFYQRLLLTTLTPI-------------------------------------------------------------------------------------------------GLGCVLVLTHWMAKERA---------------------GIGS-----ASVLARKAA--------------------WSRHMAAGLLLTFLVFTSASTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYYRIYAGIMIVVYPIGIPLLYAFILWINRDSLNPRVRSEAIPQPTGAVEKKVSLVPANYGDGLQERLDQRRRNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADMWLYRLGCVIIFLSNFLALLIKVDAAGEGNRAA--LGGILIAVNVFLILAVLSTSWFATQQMV 1152
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE) HSP 1 Score: 223 bits (568), Expect = 3.410e-55 Identity = 153/506 (30.24%), Postives = 231/506 (45.65%), Query Frame = 2 Query: 542 LPLSRLKIVIVVWQILTAFSEITQVPMPYVYKSFLNAVGIFTFDLGWIFSAACLTDGLNFYDKLLIVTLGPVFMLAFLGLTFYLGARRHRQLLPPPAGASENGSVSRGRASELRPTRLDSAVVNFREAFSGVPLAQPPSQGSSIQQGVSHGQKPGNPRASEGERKDAREGVSSLRSLIPWMVGDRGQGAQVHDVHGPPSGSDSNGAHAVGDCRTSPASWISRKSGVHLPGPDGHEDPEKSELWWLFARHMTIVLIVFYLIYSEVSTVVFQTFVCQDLSEIGKSYLRADLSLECYTSTHHAYRVYAGLMIFIYPLGIPVAFFYFLMRQRLSINPTVDS-----PRQGLTKERILF---------EKLKRRSHDQTVAPTSVLWVAYFPNRYYYEVCECMRRLFLTGLMVFFLADTSGQVAIGCLIAFVSLIMFELLRPHVDPLDIQLYRAGCVVVFFSNFLALMIKAEVADVDSSSANIYAVVLVLVNVLMFLSIFWNIWASTEALL 2017 LP+ +LKI++VVWQILT F IT V P Y FL+ V + D+G +F+A+CL ++FY +LL+ TL P+ G+ + L WM R +G AS ++R++ ++RHM L++ +L+++ ST+ F+TF C D + G+SYLRAD SL C T H +R+YAG+MI +YP+GIP+ + + L R S+NP V S P G+ + L E+L++R ++ + P+ LW + P+ YYYEV EC RR+ LTG+++FF A T+ Q A+ C+ AFVSL+ FELLRPH+DP D LYR GCV++F SNFLAL+IK + A + +A +L+ VNV + L++ W +T+ ++ Sbjct: 1134 LPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWVDVVNLDVGQVFTASCLLPSVSFYQRLLLTTLTPI-------------------------------------------------------------------------------------------------GLGCVLVLTHWMAKQRA---------------------GIGS-----ASVLARRAA--------------------WSRHMAAGLLLTFLVFTSTSTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYFRIYAGIMILVYPIGIPLLYAFILWINRESLNPRVRSEATPQPTGGVEMDVALVPANYGDDLEERLEQRRNNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADAWLYRLGCVIIFLSNFLALLIKVDAAGEGNRAA--LGGILIAVNVFLILAVLSTSWFATQQMV 1494 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1012.194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1012.194.1 >prot_D-dichotoma_M_contig1012.194.1 ID=prot_D-dichotoma_M_contig1012.194.1|Name=mRNA_D-dichotoma_M_contig1012.194.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=718bp MIGGVSGEYPPESEGGDDARNPPVREDNGFSWPREGHGASGRDAKRICSTback to top mRNA from alignment at D-dichotoma_M_contig1012:156549..168629- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1012.194.1 ID=mRNA_D-dichotoma_M_contig1012.194.1|Name=mRNA_D-dichotoma_M_contig1012.194.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=12081bp|location=Sequence derived from alignment at D-dichotoma_M_contig1012:156549..168629- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1012:156549..168629- >mRNA_D-dichotoma_M_contig1012.194.1 ID=mRNA_D-dichotoma_M_contig1012.194.1|Name=mRNA_D-dichotoma_M_contig1012.194.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=4308bp|location=Sequence derived from alignment at D-dichotoma_M_contig1012:156549..168629- (Dictyota dichotoma ODC1387m male)back to top |