mRNA_D-dichotoma_M_contig1010.173.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1010.173.1
Unique NamemRNA_D-dichotoma_M_contig1010.173.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
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BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Match: D8LCY2_ECTSI (Holliday junction resolvase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY2_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.350e-60
Identity = 122/228 (53.51%), Postives = 153/228 (67.11%), Query Frame = 1 
Query:  133 LIKDLRCDDGPARYRTTFTTSSKRNGEPEMTGGNMRSKRDRMVSRNDLPAILSGASMVQLCRRPENMDARLVGLDVAPTKFGVAVSDETRRLAIPVTVIHRRDPKSKKALDQSGSGSVFAKLRRVIEESSACGLVVGWPLALSGEADGQCLMVLRFLREMRLVGKVMLPVTFRDERMTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLDSPEAEAGGLSTWPT 816
            LI   R    PAR  TT   ++   G P       R  R+ +  ++DLP IL+ A MV+LC  P N  + LVGLDVAP+ FGVAVSDET+ LA P+T + RR   S K LD +    V  KLR ++E+ SACGLVVGWPL+ SG A+GQCLMVL+FLR++ L GKV +PVT  DERMT+V AR +L ++GLG  +++  EDE AAM+ILQGFLDS EA  GGLST PT
Sbjct:   33 LIAPHRPSAAPARRLTTTGGAA---GAPPRGYSRHRHPRNPVPGKDDLPTILTAAGMVKLCGLPGNRGSPLVGLDVAPSNFGVAVSDETKTLAFPLTRVPRRQ--STKKLDPA---LVIGKLREIVEDCSACGLVVGWPLSKSGRAEGQCLMVLQFLRQLHLRGKVDIPVTLFDERMTSVEARGILKDDGLG-RKIAEREDETAAMVILQGFLDSAEAVHGGLSTLPT 251
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BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Match: A7NQA7_ROSCS (Putative pre-16S rRNA nuclease n=2 Tax=Roseiflexus castenholzii TaxID=120962 RepID=A7NQA7_ROSCS)

HSP 1 Score: 92.4 bits (228), Expect = 1.040e-18
Identity = 58/152 (38.16%), Postives = 85/152 (55.92%), Query Frame = 1 
Query:  340 RLVGLDVAPTKFGVAVSDETRRLAIPVTVIHRRDPKSKKALDQSGSGSVFAKLRRVIEESSACGLVVGWPLALSGEADGQCLMVLRFLREMRLVGKVMLPVTFRDERMTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLDSPEAEAG 795
            R++ LDV   + GVA+SD TR LA P+T I R  P++          +   ++  +I E     LVVG PL +SG+   Q  +V +F+ E+R    + +P+TF DER+TTV A  ++ +  L  E+  A  DE AA IILQ FLD+    +G
Sbjct:    8 RVMALDVGEQRIGVALSDPTRTLATPLTTI-RAKPRA----------TALKRIASLIREHDVAALVVGLPLTMSGDVGPQAALVQQFVEELRRA--IAIPLTFVDERLTTVAAERMMIDLKLKPEQRKARIDEVAASIILQDFLDAHRQASG 146
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BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Match: A0A7V2KQX7_9CHLR (Putative pre-16S rRNA nuclease n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7V2KQX7_9CHLR)

HSP 1 Score: 84.7 bits (208), Expect = 5.240e-16
Identity = 55/151 (36.42%), Postives = 84/151 (55.63%), Query Frame = 1 
Query:  340 RLVGLDVAPTKFGVAVSDETRRLAIPVTVIHRRDPKSKKALDQSGSGSVFAKLRRVIEESSACGLVVGWPLALSGEADGQCLMVLRFLREMRLVGKVMLPVTFRDERMTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLDSPEAEA 792
            R +GLD+     GVA+SD +  LA P+T+I R+     +A D    G +       I+++    ++VG P +L+G    Q   V +F   +RL   +++PV FRDER+TTV AR L+ E     +   A +D  AA IILQGFLD  ++++
Sbjct:    2 RYMGLDIGDRWIGVAISDPSGILASPLTIIKRKQ----EAADIEAIGDI-------IKQNDIGRVIVGLPRSLNGSLGRQAEKVQQFTDNLRL--HILIPVEFRDERLTTVSARSLMQETVPRKKRQKARDDAIAAAIILQGFLDEEQSQS 139
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BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Match: A0A1X0U6D4_9NOCA (Putative pre-16S rRNA nuclease n=6 Tax=Rhodococcus TaxID=1827 RepID=A0A1X0U6D4_9NOCA)

HSP 1 Score: 81.3 bits (199), Expect = 2.190e-14
Identity = 58/162 (35.80%), Postives = 80/162 (49.38%), Query Frame = 1 
Query:  340 RLVGLDVAPTKFGVAVSDETRRLAIPVTVIHRRDPKSKKALDQSGSGSVFAKLRRVIEESSACGLVVGWPLALSGEADGQCLMVLRFLREM--RLVGKVMLPVTFRDERMTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLDSPEAEAGGLSTWPTP 819
            R +G+DV   + GVAVSD    LA PV  + R  PK   A D        A++  ++ E  A  +V+G P  L GE+         F R +  RL G   +P+   DER+TTV A   L + G+  +   +  D+AAA+ ILQG+LD   A      T PTP
Sbjct:   24 RRIGIDVGSVRVGVAVSDPRCVLATPVETVVRSKPKGSDASD-------VARVVEIVTEYEAVEVVIGLPRTLRGESGSAVKAAEGFARVLSRRLPG---VPIRMSDERLTTVTATRALRDSGVRGKSQRSVIDQAAAVAILQGWLDERSARLKSAETDPTP 175
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BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Match: X0XGW4_9ZZZZ (YqgFc domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0XGW4_9ZZZZ)

HSP 1 Score: 79.3 bits (194), Expect = 4.650e-14
Identity = 54/152 (35.53%), Postives = 86/152 (56.58%), Query Frame = 1 
Query:  340 RLVGLDVAPTKFGVAVSDETRRLAIPVTVIHRRDPKSKKALDQSGSGSVFAKLRRVIEESSACGLVVGWPLALSGEADGQCLMVLRFLREMRLVGKVMLPVTFRDERMTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLDSPEAEAG 795
            R++GLDV   + GVAV DE+ R+A+PV V+ RR+  +   LD          + R+++E  A  +V+G P++L+G    Q   V  F +E+    ++ LP+ + DER+++V A+  L   G    +  A  D AAA I+LQ +LD   A+AG
Sbjct:    2 RILGLDVGERRIGVAVVDESVRVALPVAVVERRELPAD--LDA---------IARLVQEQGAEAVVIGLPISLNGSLGPQAQAVKAFGQEVS--DRLSLPIEYWDERLSSVEAQRRLASAGHRGRKAKAKRDAAAAAIVLQSYLD---AQAG 137
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BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Match: A0A7W9UJT4_9NOCA (Putative pre-16S rRNA nuclease n=1 Tax=Nocardia transvalensis TaxID=37333 RepID=A0A7W9UJT4_9NOCA)

HSP 1 Score: 79.7 bits (195), Expect = 7.960e-14
Identity = 53/150 (35.33%), Postives = 75/150 (50.00%), Query Frame = 1 
Query:  340 RLVGLDVAPTKFGVAVSDETRRLAIPVTVIHRRDPKSKKALDQSGSGSVFAKLRRVIEESSACGLVVGWPLALSGEADGQCLMVLRFLREMR-LVGKVMLPVTFRDERMTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLDSPEA 786
            R + LDV   + GVA  D    LA PV  + R    SK+    SG+    A++  ++ E  A  ++VG P  L GE      M + F R++R L+  V  P+   DER+TTV A   L + G+         D+AAA+ ILQG+LD   A
Sbjct:   20 RRIALDVGTVRIGVAACDPDGVLATPVETVQRAG--SKRGRGPSGAAGELARIAEIVREYEAVEVIVGLPRTLRGENGTSARMAISFARDLRSLIPGV--PIRLSDERLTTVSAARALRDSGVRARGQRQVIDQAAAVSILQGWLDERSA 165
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BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Match: A0A3S0ZJT4_9ACTN (Putative pre-16S rRNA nuclease n=1 Tax=Gordonia sp. TaxID=84139 RepID=A0A3S0ZJT4_9ACTN)

HSP 1 Score: 77.8 bits (190), Expect = 1.890e-13
Identity = 59/148 (39.86%), Postives = 77/148 (52.03%), Query Frame = 1 
Query:  340 RLVGLDVAPTKFGVAVSDETRRLAIPVTVIHRRDP-KSKKALDQSGSGSVFAKLRRVIEESSACGLVVGWPLALSGEADGQCLMVLRFLREM-RLVGKVMLPVTFRDERMTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLDS 777
            R +G+DV   + GVAV D    LA PV  + R    KS +A D++  G    +L  ++ E  A G++VG P  L+G        V RF+    R V  V  PV F DERMTTV A   L E G    +     D+AAA+ ILQG+LDS
Sbjct:    7 RRIGVDVGTVRIGVAVCDPDGILATPVETVPRGTAGKSTQAQDEAAVG----RLAEIVAEYEAVGVIVGLPRDLAGREALAAESVRRFVEGFQRAVAPV--PVEFVDERMTTVSAARSLREAGKDSRKARWLIDQAAAVTILQGWLDS 148
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BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Match: A0A2H5WFE8_9BACT (Putative pre-16S rRNA nuclease n=1 Tax=bacterium HR12 TaxID=2035407 RepID=A0A2H5WFE8_9BACT)

HSP 1 Score: 77.0 bits (188), Expect = 2.970e-13
Identity = 52/154 (33.77%), Postives = 74/154 (48.05%), Query Frame = 1 
Query:  316 RRPENMDARLVGLDVAPTKFGVAVSDETRRLAIPVTVIHRRDPKSKKALDQSGSGSVFAKLRRVIEESSACGLVVGWPLALSGEADGQCLMVLRFLREMRLVGKVMLPVTFRDERMTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLDS 777
            RRP     R++GLD+   + GVA+SD+ RRLA+P+  +    P+              A +  ++ E     +VVG PL+LSGE          F   +R V  V  PV   DER+TTV A   L E G          D +AA ++LQ +LD+
Sbjct:    4 RRPRG---RVLGLDLGEARIGVAISDDERRLAVPLGTVRTGAPRD------------LAAIAELVREHDVALVVVGHPLSLSGERGEAARKAEAFAEALREVLPV--PVALHDERLTTVEAERALGEAGARGRRRRRAVDRSAAAVMLQAYLDA 140
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BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Match: A0A1W0B5X0_9NOCA (Putative pre-16S rRNA nuclease n=2 Tax=Nocardia donostiensis TaxID=1538463 RepID=A0A1W0B5X0_9NOCA)

HSP 1 Score: 77.8 bits (190), Expect = 4.210e-13
Identity = 50/146 (34.25%), Postives = 74/146 (50.68%), Query Frame = 1 
Query:  340 RLVGLDVAPTKFGVAVSDETRRLAIPVTVIHRRDPKSKKALDQSGSGSVFAKLRRVIEESSACGLVVGWPLALSGEADGQCLMVLRFLREMR-LVGKVMLPVTFRDERMTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLD 774
            R + +DV   + GVA SD    LA PV  + R   K++ A    G+G+  A++  ++ E  A  ++VG P  L GE      + + F   +R  V  V  P+   DER+TTV A   L + G+         D+AAA+ ILQG+LD
Sbjct:   24 RRIAIDVGSVRIGVAASDPDCLLATPVETVARAQRKARSA----GAGTDIARIAEIVREYEAVEIIVGLPRTLRGEKGTAATLAIEFAERLREAVAPV--PIRLSDERLTTVSAARALRDSGVRARGQRRVIDQAAAVSILQGWLD 163
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BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Match: A0A0S7X936_9DELT (Putative pre-16S rRNA nuclease n=1 Tax=Deltaproteobacteria bacterium DG_8 TaxID=1703397 RepID=A0A0S7X936_9DELT)

HSP 1 Score: 76.6 bits (187), Expect = 4.270e-13
Identity = 52/146 (35.62%), Postives = 79/146 (54.11%), Query Frame = 1 
Query:  340 RLVGLDVAPTKFGVAVSDETRRLAIPVTVIHRRDPKSKKALDQSGSGSVFAKLRRVIEESSACGLVVGWPLALSGEADGQCLMVLRFLREMRLVGKVMLPVTFRDERMTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLDS 777
            R++GLD+     GVAVSDE   +A  +T + R      K L+Q        +L R+IEE     ++VG P  ++G       MVL F+ E++    V LP+   DER++TV A+ +L E  +  ++     D+ AA+I LQG+LDS
Sbjct:    2 RVLGLDIGSKTIGVAVSDEMSLIAQGITTLRR------KGLNQD-----IKQLLRLIEEHRVEKIIVGLPKNMNGSLGTSAKMVLSFIDELKKF--VDLPIITWDERLSTVAAQRVLLEADMSRKKRKRVIDKVAALITLQGYLDS 134
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1010.173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCY2_ECTSI1.350e-6053.51Holliday junction resolvase-like protein n=1 Tax=E... [more]
A7NQA7_ROSCS1.040e-1838.16Putative pre-16S rRNA nuclease n=2 Tax=Roseiflexus... [more]
A0A7V2KQX7_9CHLR5.240e-1636.42Putative pre-16S rRNA nuclease n=1 Tax=Dehalococco... [more]
A0A1X0U6D4_9NOCA2.190e-1435.80Putative pre-16S rRNA nuclease n=6 Tax=Rhodococcus... [more]
X0XGW4_9ZZZZ4.650e-1435.53YqgFc domain-containing protein n=1 Tax=marine sed... [more]
A0A7W9UJT4_9NOCA7.960e-1435.33Putative pre-16S rRNA nuclease n=1 Tax=Nocardia tr... [more]
A0A3S0ZJT4_9ACTN1.890e-1339.86Putative pre-16S rRNA nuclease n=1 Tax=Gordonia sp... [more]
A0A2H5WFE8_9BACT2.970e-1333.77Putative pre-16S rRNA nuclease n=1 Tax=bacterium H... [more]
A0A1W0B5X0_9NOCA4.210e-1334.25Putative pre-16S rRNA nuclease n=2 Tax=Nocardia do... [more]
A0A0S7X936_9DELT4.270e-1335.62Putative pre-16S rRNA nuclease n=1 Tax=Deltaproteo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1010contigD-dichotoma_M_contig1010:9174..14811 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score92.4
Seed ortholog evalue3.3e-16
Seed eggNOG ortholog383372.Rcas_3713
Preferred nameyqgF
KEGG koko:K07447
GOsGO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360
EggNOG free text desc.Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
EggNOG OGs2G74F@200795,375V0@32061,COG0816@1,COG0816@2
COG Functional cat.J
Best tax levelChloroflexia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons7
Model size1313
Cds size783
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927493.764324-UTR-D-dichotoma_M_contig1010:9173..92331622927493.764324-UTR-D-dichotoma_M_contig1010:9173..9233Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1010 9174..9233 +
1690797999.2442925-UTR-D-dichotoma_M_contig1010:9173..92331690797999.2442925-UTR-D-dichotoma_M_contig1010:9173..9233Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1010 9174..9233 +
1622927493.8570592-UTR-D-dichotoma_M_contig1010:14341..148111622927493.8570592-UTR-D-dichotoma_M_contig1010:14341..14811Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1010 14342..14811 +
1690797999.3298519-UTR-D-dichotoma_M_contig1010:14341..148111690797999.3298519-UTR-D-dichotoma_M_contig1010:14341..14811Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1010 14342..14811 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927493.7788475-CDS-D-dichotoma_M_contig1010:9233..95441622927493.7788475-CDS-D-dichotoma_M_contig1010:9233..9544Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 9234..9544 +
1690797999.2676501-CDS-D-dichotoma_M_contig1010:9233..95441690797999.2676501-CDS-D-dichotoma_M_contig1010:9233..9544Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 9234..9544 +
1622927493.790913-CDS-D-dichotoma_M_contig1010:10555..106441622927493.790913-CDS-D-dichotoma_M_contig1010:10555..10644Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 10556..10644 +
1690797999.2789872-CDS-D-dichotoma_M_contig1010:10555..106441690797999.2789872-CDS-D-dichotoma_M_contig1010:10555..10644Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 10556..10644 +
1622927493.801488-CDS-D-dichotoma_M_contig1010:10880..109541622927493.801488-CDS-D-dichotoma_M_contig1010:10880..10954Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 10881..10954 +
1690797999.2877617-CDS-D-dichotoma_M_contig1010:10880..109541690797999.2877617-CDS-D-dichotoma_M_contig1010:10880..10954Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 10881..10954 +
1622927493.8109298-CDS-D-dichotoma_M_contig1010:11571..116641622927493.8109298-CDS-D-dichotoma_M_contig1010:11571..11664Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 11572..11664 +
1690797999.2962165-CDS-D-dichotoma_M_contig1010:11571..116641690797999.2962165-CDS-D-dichotoma_M_contig1010:11571..11664Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 11572..11664 +
1622927493.8195963-CDS-D-dichotoma_M_contig1010:12217..122961622927493.8195963-CDS-D-dichotoma_M_contig1010:12217..12296Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 12218..12296 +
1690797999.3045876-CDS-D-dichotoma_M_contig1010:12217..122961690797999.3045876-CDS-D-dichotoma_M_contig1010:12217..12296Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 12218..12296 +
1622927493.8292294-CDS-D-dichotoma_M_contig1010:13599..136551622927493.8292294-CDS-D-dichotoma_M_contig1010:13599..13655Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 13600..13655 +
1690797999.313118-CDS-D-dichotoma_M_contig1010:13599..136551690797999.313118-CDS-D-dichotoma_M_contig1010:13599..13655Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 13600..13655 +
1622927493.8407626-CDS-D-dichotoma_M_contig1010:14260..143411622927493.8407626-CDS-D-dichotoma_M_contig1010:14260..14341Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 14261..14341 +
1690797999.3215568-CDS-D-dichotoma_M_contig1010:14260..143411690797999.3215568-CDS-D-dichotoma_M_contig1010:14260..14341Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1010 14261..14341 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1010.173.1prot_D-dichotoma_M_contig1010.173.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1010 9234..14341 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1010.173.1

>prot_D-dichotoma_M_contig1010.173.1 ID=prot_D-dichotoma_M_contig1010.173.1|Name=mRNA_D-dichotoma_M_contig1010.173.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=261bp
MSGRLLNTVKLGIPRTFVSVVSLPLIKDLRCDDGPARYRTTFTTSSKRNG
EPEMTGGNMRSKRDRMVSRNDLPAILSGASMVQLCRRPENMDARLVGLDV
APTKFGVAVSDETRRLAIPVTVIHRRDPKSKKALDQSGSGSVFAKLRRVI
EESSACGLVVGWPLALSGEADGQCLMVLRFLREMRLVGKVMLPVTFRDER
MTTVGARCLLYEEGLGYEEVSACEDEAAAMIILQGFLDSPEAEAGGLSTW
PTPPFGPGSR*
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mRNA from alignment at D-dichotoma_M_contig1010:9174..14811+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1010.173.1 ID=mRNA_D-dichotoma_M_contig1010.173.1|Name=mRNA_D-dichotoma_M_contig1010.173.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=5638bp|location=Sequence derived from alignment at D-dichotoma_M_contig1010:9174..14811+ (Dictyota dichotoma ODC1387m male)
CGAAGACAAAGCGTGAAGATACCGTCGAGATCACTTGGAACGAAGTCACT
GATTTTTCGCATGTCAGGAAGACTCTTGAATACTGTCAAGTTGGGGATTC
CACGAACATTTGTATCTGTGGTGTCTTTGCCGTTAATAAAGGATTTGCGA
TGCGATGACGGTCCTGCGAGGTATCGAACAACGTTTACGACGTCAAGTAA
GCGAAACGGCGAACCAGAGATGACAGGTGGAAACATGCGATCGAAGCGGG
ATAGAATGGTTTCGAGAAATGATCTTCCTGCGATACTTTCTGGGGCGAGC
ATGGTGCAACTATGCCGGAGGCCTGAGAATATGGATGCTCGACTGGTCGG
ACTTGATGTGGCTCCAACGAAGTGAGCGAAGACTCGACGGTCCGTGATTG
CTGTTGAATAGGTACACCAATTCTTGCACGTCACCTGCCTTATACTCCAA
GTATTACTTTTCCTGATTGATGCACAACAGTAAAGTTCAGCCGGCCTGCG
TGATCAACAATGCCGCGTAGTTCTCTCTGAACAGAGGTCAATTCCTTTTC
GACGTACTGTAGACACTTCGTGCAGCGAGTTCCGTTTGTTCCGTCCGTTC
CGTCGAGCCCTCCGAGCTGCCGGAAATGAACAGCCGAATCTGATCATGCC
AATTACAGTACAGTTGTGATCCCGGCTTACTGTAGTAGGATTCACGTTTT
TCTACAGGGAGGGGGGGGGGGGCAATGAAAAAAATGGCTATTTGCTTGGA
TACTCACTAAATCCAAGTAAAAGGGGCGTAGAGCCACATTTGAATTGCTC
CCCCCACTGTAGTGGAGCATCCTGGTTTTGTAGGGTAGGGGTACTGTAGC
AGTTATCGCATGAATTTAACCCTTTCGACACCAGGGTTGAGTTCCACTAG
TCCTTTTGAAAACACTGCAGAAAAGGCCAGCTCAACGTTTAAAGGGTCAA
AATGGGGAATACAGCGCTGCCCCAGATTTCAACGACAGGTTTATCCACCA
ATTATGATTATCGACGCCGTAGCGCCATCCTTTGTGGGCAGATGGAAGCG
CCATACTATAGTTGGAGGTGCAACTTGTAGTTATTCACCGCGTCCAGGGA
TGGAAGTGTGGACAAGCCCGGGCCGGTTTTGTACGGTAAACATGCACCCT
ACTAAACCTGGAGCACGATTCCATGTGGAATCAATCTGTATGCATTCTAG
ACCATACCATCCGCGCATCCACCCGATATGACCACCTTAATCAGATTCGA
TTTTTGTTCGTTTTTGGTACCTGGTACAGTCGAACCGTCCCCTGAGTCGT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTTTCTCGCACGTCTGTCTATTCTAGGTTTGGGGTGGCCGTATC
GGACGAAACGCGGAGATTGGCGATTCCGGTCACCGTGATCCACCGAAGGG
ATCCGAAGTCGAAGAAGGCATGTGAGCATAGGGGGGTTTCCTAGCGAGAT
GTGGAATTCACGACTAAGCCGTGCGTCCGAGTGTCGCCAAGACCTCATTG
CGTGCTGTTTTCGCACATGCTGGGTGAACGTGATGCTGAGGCAACTCACC
AGACGTCGCCCTGATCTTCCACGGAATGTTAATGGCGCCGTAATCGGGGT
ACCTTGGAATTAATCTTTGTTTCCTTCTGTCCTTTGACCTTATCCCCATT
ACGGCAGTGGATCAATCCGGCAGTGGATCCGTGTTCGCCAAACTGAGACG
CGTCATCGAGGAAAGTTCGGCGTGTGGCCTTGTGAGTTTGCGGACCAGTA
CCTCGTAGTGAACCTTCTGTGGTGTTGTCCTGTCTCGCACGTGAGATTTG
GTGTCGTCAGCCTACGGTGTGTCGTCCTCAGGCAACGGTTAGCGGCACGA
GTTCGGCATTGCTCATCCATGCGCGTGTTGCGCTGGTATTTTAAATACCA
TGGAATGAGAGAGGAATGAAGAATGATGTGACGTTCAACTCCACCATGTG
CACATCCTAGCCATGCACATCAAGTGGTCCACGAAGAACCACAACGCGTG
GACCCGACCTGACTTCTCCCTTAGGTCATACTTTGCGACCTGCGCCAGAG
TATTACGTTGGAAGTTCCTCTACGAAGTAAGGGATGGTACAGGAATGGTA
CAGGAATGGTACAGGGGTACAATCTTAATTAAATAGCATCTGACTGTTTC
CATTTTCCATTCTAAGTTCAAGTAAATATTACTGTGTCGGAGATACAGTG
TGTCGATAGTATTCGATGATATTTGAACTGAACCATGTATTCGTTGGGAA
AGAAGTCCTGTACTGAAGGAAGACCGCAGGGTTCGTTTGGCGAACTCAAT
CTCGAGAGGATAGTGGAACTTGATAACCTTCTCGTGTTCGTGCGACAGGT
GGTTGGGTGGCCACTTGCCTTGTCGGGAGAGGCGGACGGTCAGTGCTTGA
TGGTGCTGCGATTTCTACGCGAAATGCGATTGGTCGGGAAGGTAACACGA
AAGGTTTCGCCTGCCTACTCGTGCCGAAGCCTAGCACGCCTGGTTATCCC
GTCTACTACTCCCAGTAAATTCCTCCGATCGTCTTCGGCTCGCTAGCAAG
TTAGGCTTCTGGAAAACCTTGTTCACCAGAGGCTCGACCTTTTGATGCCA
TGAGATATCCGTAGCTAACTCGGTCGATCGCATGGCTATTTACGCGGGGC
TTTGCATGTTCGCGGAGCTGTCCACGCGCGAGCCACGTTAACTTGTTGTC
TTATGCATCGAGCAGAAGAGGTTGGTGGTGCCTGCGATACGCATATCGTG
CTCTCGAGTTGCTCGAGTTGCGTCTCCGGCACAAGACTTACTTCCCAAAC
CCTAGAGTGTGTCCGGCACGAGACTTACTTCCTCGGTCTCGAGTTACGAC
GGCTATCCTCTGCCGTTGTGCCTGTTACGCTTCAGCCCCCCCAAGGTACG
GACGGAAGCCATTCTCAGCATTCTCAGCATTCCGGCTTGGTTGTATCCGT
GCTCCTGATTCGCGTGGTCCCGCCTTGTACGTCTCGCTGTGAAGGTGATG
CTTCCAGTGACCTTTCGCGACGAGAGGATGACCACCGTCGGAGCTCGGTG
CTTGCTGTATGAAGAAGGTTTAGGTGAGGAATGCGTTCTGCGCCATGTGA
AGAAGGCATTTGGAATTCGATCAAGGTAGTGTGAAGGGGGTGCGTTGCGT
TGCGTTGCGCAAGTCGCAACCGACGTCCAAAGTGATCGAACATGGGAAGC
AAAGTTTAGTCGTCCAAAGGGATCCAAGCGGGGTGAGGGCGTAATTTCAA
ACAATCTTCACGTGCGCTTGATAGCTTTAGTTTCCCTCGTGTGTTAGACC
TGCATCGCGTGCATCGCGGGATTTCATTCGCCATGCGGGAAAAGCCATGC
CTAGCTCTAGAGCGTTTGTTAGGCTTCCCGAGCACTTTTGGCCAGGTGTT
GGAGCGATTCGGGAGGGCACCGCGCTGGTGATTGACCGTGATGAGAGTCT
CCTCGTATCTGTGGGGAAGAGCGTTGATTCCTCGTCTCTCGTGGAGTACA
GGGGAGGTCCCCGGGTTGTTCGGTAACCACTGTCGCAGTACAGGGGGGGG
GGATAAGTCCTACCAGGGGTTTCAATAATGAAGGGGTGATCCACGCCGAA
AGATGTTCATCCGCACCGTAGGTTGGTGCTTTTATGAGTAGATCGGTGAA
AGCGCAGCGGTTGGAGGTAGAAGTTGCGGTTAGTAGGTCTCCCCGTGCCT
CTGTTCTCCAATCTGTTCTCCAATCTGTTCTCCAATCTGTTCTCTGTTCT
CTGTTCTCCAATCTGTTCCAGAAAAAAATGTTCCCGGAGAGATGAGCACA
TGTTTATATGTTGTGTGTGTTGTTTTTTTATCCTTACCTCCGGCGGCTAG
AATAATCACTCCGGCTAATGAACAAATTCCTCTGTAGCAGAATTGAAGTC
AGGTGCACGGGTAAACTCTACTGTAGTAACTTGCAAACTGAAGCTGTACC
TGTGAGGTCGGAGCTCAAGAGATGGGATGACATGAGCATGAGACAAAATC
ACGCAACCACAAGGTTCTGACTGAGGATGATGCAAAATTGGATCCCATTT
TCTGTGGGAGCTTGAATGACGACGGTGTTTTTAGCTCGTCGAGCCGTTAG
GGCGTGACGGTGTTCTTCGCTCATCGGCGGGAAGGAGGATGCGGAAACAG
ACACAGGCCTTGGGATGTTCAATTGGTCATTGAGCAGCATTTTGGTCTCG
TTCGAGGGGATGTCTTTGCCCCGTCGGAGGTAGCATGGGGCAGTTTCGCG
GTGCCCACTTGAAGACCGAAGACCCTCGTGTAGACGCTGACTCCGCGGAT
CCCGATGTATCCGGTACTGTGGATCAATGTTGATGTGATGTGCCCGCCCT
TCCTCGTCGACGGGTCGTTGTACCAGGGTACGAGGAAGTTTCTGCGTGCG
AAGACGAAGCGGCGGCCATGATCATCCTCCAGGCGAGTTACCGAGGTCGA
GACAGAGGTTGACCGTGACCGCGACGCGTCCAACCGAAGATTGTCTTCTC
CGTATCCCGGCCGTTTTCGATTCGTTTTCAATTCGACGTGGGCGTGAAGA
CGAGAGGGTCCAACAGGCTCGAGTTGAAGTATCGACTCGCACAAATACAC
AGGCGAGAGTTATAGTCAAGAATCCTACTGACCCTAACCCTCTCACATCG
GGGCAAAGTATGGGGTCGTCTCTATCGTCTTGTCTCTATCGTGTCGTCTC
TATCGTGTCGTCTCTATCGTCTTGTCTCTATCGTCTTGTCTCTATCGTGT
CGTCTCTATCGTCTTGTCTCTATCGTGTCGTCTCTATCGTGTCGTCTCTA
TCGTGTCGTCTCTATCGTCTTGTCTCTATCGTGTCGTCTCTATCGTCTTG
TCTGCGTCGCTCATGGTCGTGTTCGTGTTCGCAGAGTCCTTCACCGGAGA
GATACGACCCATCCGCGGGTCGGAATTGTGACAGGCATGACTCTATCAGC
CGATTCCTACGGGCGCTGGTTACCGAACGTTGAACGATATGGGCCGTTTT
CCTACCGTGGTTCGCGTCTTTATCTCCTATGCCTCAGGGTTTTCTGGATA
GCCCGGAGGCGGAAGCAGGGGGTCTATCCACTTGGCCAACGCCACCTTTT
GGTCCCGGCAGCCGATGACAGGAACACAGGCGTGGTCTTCAAGATTATGA
GTGGCCCCAGAGCTCGTTCTCTTAAAGAGATCGTTCGTTTCTCGTCTTGG
AAGCACTTGGAAGCAACAAGGGGTCGAGTGCAGTAACTGTGCACTGGTTG
GTCTCGAGCGTCTGCCACGCAGGATGTAGAGCATTTCGTCACGTTTTGGT
TCGTTTTGGTGCGCTGGGTGGCGTCAGAAACGCCTCGAATTGACCGCGGA
ATCGAAGTCGTCACAAGATCCTTGCCATATCTTCTCCCTGCGGGCAAGAA
CCAGTGGCAAAAATACGGGCACGAAACTTCCCATGCTGCTGATGCCTCAC
ATGCTTTCAAAGACATGGCGTGTGCGCCGAAGAGACGTTCTGGTCTTGGA
AAGAGACGGCCACATTTAGGACTGGCAACATGTTTGTCTTTGAAAGCAGG
CGCAAGCGTCGCCTTGCGTGAATCTCGCTCTGGGCCCT
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig1010:9174..14811+

>mRNA_D-dichotoma_M_contig1010.173.1 ID=mRNA_D-dichotoma_M_contig1010.173.1|Name=mRNA_D-dichotoma_M_contig1010.173.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1566bp|location=Sequence derived from alignment at D-dichotoma_M_contig1010:9174..14811+ (Dictyota dichotoma ODC1387m male)
ATGTCAGGAAGACTCTTGAATACTGTCAAGTTGGGGATTCCACGAACATT
TGTATCTGTGGTGTCTTTGCCGTTAATAAAGGATTTGCGATGCGATGACG
GTCCTGCGAGGTATCGAACAACGTTTACGACGTCAAGTAAGCGAAACGGC
GAACCAGAGATGACAGGTGGAAACATGCGATCGAAGCGGGATAGAATGGT
TTCGAGAAATGATCTTCCTGCGATACTTTCTGGGGCGAGCATGGTGCAAC
TATGCCGGAGGCCTGAGAATATGGATGCTCGACTGGTCGGACTTGATGTG
GCTCCAACGAAATGTCAGGAAGACTCTTGAATACTGTCAAGTTGGGGATT
CCACGAACATTTGTATCTGTGGTGTCTTTGCCGTTAATAAAGGATTTGCG
ATGCGATGACGGTCCTGCGAGGTATCGAACAACGTTTACGACGTCAAGTA
AGCGAAACGGCGAACCAGAGATGACAGGTGGAAACATGCGATCGAAGCGG
GATAGAATGGTTTCGAGAAATGATCTTCCTGCGATACTTTCTGGGGCGAG
CATGGTGCAACTATGCCGGAGGCCTGAGAATATGGATGCTCGACTGGTCG
GACTTGATGTGGCTCCAACGAAGTTTGGGGTGGCCGTATCGGACGAAACG
CGGAGATTGGCGATTCCGGTCACCGTGATCCACCGAAGGGATCCGAAGTC
GAAGAAGGCATGTTTGGGGTGGCCGTATCGGACGAAACGCGGAGATTGGC
GATTCCGGTCACCGTGATCCACCGAAGGGATCCGAAGTCGAAGAAGGCAT
TGGATCAATCCGGCAGTGGATCCGTGTTCGCCAAACTGAGACGCGTCATC
GAGGAAAGTTCGGCGTGTGGCCTTTGGATCAATCCGGCAGTGGATCCGTG
TTCGCCAAACTGAGACGCGTCATCGAGGAAAGTTCGGCGTGTGGCCTTGT
GGTTGGGTGGCCACTTGCCTTGTCGGGAGAGGCGGACGGTCAGTGCTTGA
TGGTGCTGCGATTTCTACGCGAAATGCGATTGGTCGGGAAGGTGGTTGGG
TGGCCACTTGCCTTGTCGGGAGAGGCGGACGGTCAGTGCTTGATGGTGCT
GCGATTTCTACGCGAAATGCGATTGGTCGGGAAGGTGATGCTTCCAGTGA
CCTTTCGCGACGAGAGGATGACCACCGTCGGAGCTCGGTGCTTGCTGTAT
GAAGAAGGTTTAGGTGATGCTTCCAGTGACCTTTCGCGACGAGAGGATGA
CCACCGTCGGAGCTCGGTGCTTGCTGTATGAAGAAGGTTTAGGGTACGAG
GAAGTTTCTGCGTGCGAAGACGAAGCGGCGGCCATGATCATCCTCCAGGG
TACGAGGAAGTTTCTGCGTGCGAAGACGAAGCGGCGGCCATGATCATCCT
CCAGGGTTTTCTGGATAGCCCGGAGGCGGAAGCAGGGGGTCTATCCACTT
GGCCAACGCCACCTTTTGGTCCCGGCAGCCGATGAGGTTTTCTGGATAGC
CCGGAGGCGGAAGCAGGGGGTCTATCCACTTGGCCAACGCCACCTTTTGG
TCCCGGCAGCCGATGA
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