mRNA_D-dichotoma_M_contig1008.152.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1008.152.1
Unique NamemRNA_D-dichotoma_M_contig1008.152.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
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BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Match: A0A6H5JA26_9PHAE (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA26_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 6.850e-124
Identity = 171/208 (82.21%), Postives = 192/208 (92.31%), Query Frame = 1 
Query:  133 IKNVVFIIAMEAEANPLIERLALVEDTTKFPPAAPSKYFGGTYQGAAVHVVTNGKCKRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFLSTRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFDHTETDDRIMEENDARVKDMEAAAVAWACEQHGTPMFCLKVVTDLVDGGGVGE 756
            IKNVV I+AMEAEA+PLIERL LVED  KFP AAPSK F G+YQGAA++VVTNGKC RFGVDQ+GTVAAGLSTWLS+E +KPDLVINAGTAGGFKKH T IGD F+ST V+NHDRRIPIPGFKEFG+G++ESHPTP+ML  LGFK GVV+TG+SFDHT+TDD++MEENDARVKDMEAAAVAWACEQHGTP+FC+KVVTDLVDGGGVGE
Sbjct:   89 IKNVVVIVAMEAEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQVGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVSTGSSFDHTKTDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGE 296
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BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Match: D8LCX1_ECTSI (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX1_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 2.800e-118
Identity = 163/197 (82.74%), Postives = 180/197 (91.37%), Query Frame = 1 
Query:  166 AEANPLIERLALVEDTTKFPPAAPSKYFGGTYQGAAVHVVTNGKCKRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFLSTRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFDHTETDDRIMEENDARVKDMEAAAVAWACEQHGTPMFCLKVVTDLVDGGGVGE 756
            AEA PLIERL LVED  KFP AAPSK F G+YQGAA++VVTNGKC RFGVDQIGTVAAGLSTWLS+E +KPD+VINAGTAGGFKKH T IGD F+ST V+NHDRRIPIPGFKEFG+G++ESHP P+ML  LGFK GVVTTG+SFDHTETDD++MEENDARVKDMEAAAVAWACEQHGTP+FC+KVVTDLVDGGGVGE
Sbjct:   18 AEACPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDIVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPAPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGE 214
[Close]
BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Match: A0A835YY09_9STRA (Nucleoside phosphorylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY09_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.480e-76
Identity = 120/195 (61.54%), Postives = 141/195 (72.31%), Query Frame = 1 
Query:  160 MEAEANPLIERLALVEDTTKFPPAAPSKYFGGTYQGAAVHVVTNGKCKRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFLSTRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFDHTETDDRIMEENDARVKDMEAAAVAWACEQHG-TPMFCLKVVTDLVDG 741
            MEAEA PLI+ L L  D   FP +AP K +     G  +HVVTNGKC+R GVD +GTVA GL+ WLSIE  KPDLVINAGTAGGF + G  IGD F+S+R  NHDRRI IPG+ E+GVG  ++ PT ++  ALG+K GVVTT NS D  E D + M  N+A VKDME AAVAWACEQH  TP FC+KVVTD+VDG
Sbjct:    1 MEAEAQPLIDHLKLELDEAAFPASAPCKCYTSERNGYTMHVVTNGKCRRHGVDHVGTVAGGLAAWLSIEKFKPDLVINAGTAGGFNRMGAAIGDVFVSSRTVNHDRRIAIPGWTEWGVGKTDAVPTEQLRGALGYKHGVVTTSNSLDFIEEDAKHMLANEASVKDMEGAAVAWACEQHNNTPFFCIKVVTDIVDG 195
[Close]
BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Match: A0A7S0S4A1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4A1_9CHLO)

HSP 1 Score: 230 bits (587), Expect = 3.150e-72
Identity = 114/205 (55.61%), Postives = 146/205 (71.22%), Query Frame = 1 
Query:  133 IKNVVFIIAMEAEANPLIERLALV-EDTTKFPPAAPSKYFGGTYQGAAVHVVTNGKCKRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFLSTRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFDHTETDDRIMEENDARVKDMEAAAVAWACEQHGTPMFCLKVVTDLVDGG 744
            +K V+ + AMEAEA PLI RL LV +D  K    AP   + G+    AVHVV NG+C   GVD +GTV A LST+L+++  KPDLVI+AGTAGGFK  G  IGD F+ST V NHDRRIP+P F ++G+G   + PTP M+ +LG KTGVVT+GNS D+T+    IM+E++A VK+MEAAA+AW     GTP+ C+K VTD+VDGG
Sbjct:   20 VKTVLLVFAMEAEAQPLITRLGLVKDDPPKVLQPAPCVTYSGSLGSLAVHVVWNGRCGTHGVDNVGTVPAALSTYLAVQAFKPDLVISAGTAGGFKSQGASIGDIFVSTHVVNHDRRIPLPSFDQYGLGKASTLPTPNMVTSLGLKTGVVTSGNSLDYTDKCMDIMKEHEAAVKEMEAAAIAWVTALFGTPLVCVKAVTDIVDGG 224
[Close]
BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Match: W7TST5_9STRA (Nucleoside phosphorylase domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TST5_9STRA)

HSP 1 Score: 229 bits (585), Expect = 8.390e-72
Identity = 113/208 (54.33%), Postives = 147/208 (70.67%), Query Frame = 1 
Query:  133 IKNVVFIIAMEAEANPLIERLALVEDTTKFPPAAPSKYFGGTYQGAAVHVVTNGKCKRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFLSTRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFDHTETDDRIMEENDARVKDMEAAAVAWACEQHGTPMFCLKVVTDLVDGGGVGE 756
            IK++V  IAME EA PLI +L L + +  F  AAP   F GTY    + +VTNGK ++FG D +GTV A L+T+L++E LKPDL+INAGTAGGF+  G  IGD  +S+ + NHDRR+ +P F ++GV ++++  TP++ +AL FK GVV+TGNS DH E DD +M  NDA VKDMEAAAVAWA E +  P F LKVVTD+VDG    E
Sbjct:   30 IKSIVITIAMEGEAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATE 237
[Close]
BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Match: A0A1D1ZX64_AUXPR (PNP_UDP_1 domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZX64_AUXPR)

HSP 1 Score: 229 bits (584), Expect = 1.530e-71
Identity = 111/204 (54.41%), Postives = 145/204 (71.08%), Query Frame = 1 
Query:  133 IKNVVFIIAMEAEANPLIERLALVEDTTK-FPPAAPSKYFGGTYQGAAVHVVTNGKCKRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFLSTRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFDHTETDDRIMEENDARVKDMEAAAVAWACEQHGTPMFCLKVVTDLVDG 741
            IK ++ +IAMEAEA PLI+ L LV+DT +  P  AP   F G++ GA VHVV NGKC + GVD +GTV A L+ +L+++   PDLVI+ GTAGGF   G  IGD FLST   NHDRRIPIPGF ++G+G + + PTP++  ALG K G+V++GNS D+ E D  IM E+D  VK+MEAAA+AW+    G PMF +K +TD+VDG
Sbjct:   37 IKRILVLIAMEAEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREHDTSVKEMEAAAIAWSASLFGVPMFSVKAITDIVDG 240
[Close]
BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Match: A0A087SFB9_AUXPR (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFB9_AUXPR)

HSP 1 Score: 223 bits (568), Expect = 3.120e-69
Identity = 108/201 (53.73%), Postives = 142/201 (70.65%), Query Frame = 1 
Query:  133 IKNVVFIIAMEAEANPLIERLALVEDTTK-FPPAAPSKYFGGTYQGAAVHVVTNGKCKRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFLSTRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFDHTETDDRIMEENDARVKDMEAAAVAWACEQHGTPMFCLKVVTDL 732
            IK ++ +IAMEAEA PLI+ L LV+DT +  P  AP   F G++ GA VHVV NGKC + GVD +GTV A L+ +L+++   PDLVI+ GTAGGF   G  IGD FLST   NHDRRIPIPGF ++G+G + + PTP++  ALG K G+V++GNS D+ E D  IM E+D  VK+MEAAA+AW+    G PMF +K +TD+
Sbjct:   37 IKRILVLIAMEAEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREHDTSVKEMEAAAIAWSASLFGVPMFSVKAITDI 237
[Close]
BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Match: A0A835W7S0_CHLIN (PNP_UDP_1 domain-containing protein n=5 Tax=Chlamydomonas TaxID=3052 RepID=A0A835W7S0_CHLIN)

HSP 1 Score: 219 bits (559), Expect = 3.060e-68
Identity = 110/204 (53.92%), Postives = 140/204 (68.63%), Query Frame = 1 
Query:  133 IKNVVFIIAMEAEANPLIERLALVEDT-TKFPPAAPSKYFGGTYQGAAVHVVTNGKCKRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFLSTRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFDHTETDDRIMEENDARVKDMEAAAVAWACEQHGTPMFCLKVVTDLVDG 741
            IK+V+ + AMEAEA PLI+ L L ED   K    AP   F G ++G AVHVV NGKCK  GVD +GTV A LST+L++   KPD+VI+AGT GGFK  G  IGD FL T V NHDRRIP+P F ++G+G      TP +  ALG K+GVV++GNS D+T+    IM  + A +K+MEAAA+AWAC  +  P+ C+K VTD+VDG
Sbjct:    2 IKSVLLVFAMEAEAQPLIQALGLKEDVPAKIVGPAPCVTFSGEHEGLAVHVVWNGKCKDHGVDNVGTVPASLSTYLAVLAFKPDVVISAGTCGGFKAQGAAIGDVFLGTAVINHDRRIPLPAFDKYGLGHAALLATPHLQAALGLKSGVVSSGNSLDYTDKCMEIMTSHGAALKEMEAAAIAWACALYKVPLMCVKAVTDIVDG 205
[Close]
BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Match: A0A383W579_TETOB (PNP_UDP_1 domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383W579_TETOB)

HSP 1 Score: 219 bits (557), Expect = 8.420e-68
Identity = 110/204 (53.92%), Postives = 142/204 (69.61%), Query Frame = 1 
Query:  133 IKNVVFIIAMEAEANPLIERLALVEDTT-KFPPAAPSKYFGGTYQGAAVHVVTNGKCKRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFLSTRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFDHTETDDRIMEENDARVKDMEAAAVAWACEQHGTPMFCLKVVTDLVDG 741
            IK+VVFIIAM+AEA PLI  L L  D+  + PP  P   + G++ G  VHVV +G      VD IGTV A L+T+L+ +   PDL+I+AGTAGGFK  G  IGD F+ST   +HDRRIP+PGF + G+G  ES PTP++  ALG K G+VT+GNS D+TE D +IM ++ A VK+MEAAA+AW  +    PMFC+K VTD+VDG
Sbjct:   12 IKSVVFIIAMQAEAAPLIAALGLKHDSPPRIPPPGPCVTYSGSHAGLDVHVVWSGHDNEHNVDLIGTVPASLATYLACQAFNPDLIISAGTAGGFKARGAAIGDVFVSTGKMHHDRRIPLPGFDKQGLGYVESTPTPQLRAALGLKAGIVTSGNSLDYTEQDMQIMNKHGAAVKEMEAAAIAWVAQMFRKPMFCVKAVTDIVDG 215
[Close]
BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Match: A0A7S0Y7R1_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0Y7R1_9CHLO)

HSP 1 Score: 218 bits (556), Expect = 1.310e-67
Identity = 111/212 (52.36%), Postives = 145/212 (68.40%), Query Frame = 1 
Query:  133 IKNVVFIIAMEAEANPLIERLALVEDT-TKFPPAAPSKYFGGTYQGAAVHVVTNGKCKRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFLSTRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFDHTETDDRIMEENDARVKDMEAAAVAWAC----EQHGT---PMFCLKVVTDLVDGG 744
            IK VVF  AMEAEA P I+ L L++D  +K P   P+  F G Y+G  VHVV NGK   FGVD +GTV A L+++L+I+ L PD+VI+AGTAGGFK     IGD FL T V NHDRRIPIPGF  +G+G     PTP++  ALG K GV+++GNS D+T++  +IME     +K+ME+AA+AW+C    +  GT   P+ C+K VTD+VDGG
Sbjct:    8 IKTVVFFFAMEAEATPFIQALGLIKDEPSKLPGPIPAVSFSGDYEGLKVHVVWNGKDPLFGVDNVGTVPASLTSYLAIQALHPDIVISAGTAGGFKSKTAAIGDVFLGTHVVNHDRRIPIPGFDAYGIGRQLCLPTPQLRAALGLKEGVISSGNSLDYTDSCLKIMEAEGVAIKEMESAAIAWSCRLFVDASGTTPLPLICIKAVTDIVDGG 219
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1008.152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA26_9PHAE6.850e-12482.21PNP_UDP_1 domain-containing protein n=1 Tax=Ectoca... [more]
D8LCX1_ECTSI2.800e-11882.74PNP_UDP_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YY09_9STRA1.480e-7661.54Nucleoside phosphorylase domain-containing protein... [more]
A0A7S0S4A1_9CHLO3.150e-7255.61Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
W7TST5_9STRA8.390e-7254.33Nucleoside phosphorylase domain protein n=1 Tax=Na... [more]
A0A1D1ZX64_AUXPR1.530e-7154.41PNP_UDP_1 domain-containing protein n=1 Tax=Auxeno... [more]
A0A087SFB9_AUXPR3.120e-6953.735'-methylthioadenosine/S-adenosylhomocysteine nucl... [more]
A0A835W7S0_CHLIN3.060e-6853.92PNP_UDP_1 domain-containing protein n=5 Tax=Chlamy... [more]
A0A383W579_TETOB8.420e-6853.92PNP_UDP_1 domain-containing protein n=2 Tax=Scened... [more]
A0A7S0Y7R1_9CHLO1.310e-6752.36Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1008contigD-dichotoma_M_contig1008:230405..237904 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.0
Seed ortholog evalue1.9e-93
Seed eggNOG ortholog2880.D8LCX1
KEGG rclassRC00063,RC00318
KEGG koko:K01244
KEGG ReactionR01401
KEGG Pathwayko00270,ko01100,map00270,map01100
KEGG ModuleM00034
GOsGO:0000003,GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008477,GO:0008652,GO:0008930,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009888,GO:0009987,GO:0010087,GO:0016020,GO:0016053,GO:0016787,GO:0016798,GO:0016799,GO:0017144,GO:0019509,GO:0019752,GO:0032502,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048856,GO:0071265,GO:0071267,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.methylthioadenosine nucleosidase activity
EggNOG OGs28MG5@1,2QTZK@2759
EC3.2.2.16
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleoside phosphorylase domain
Ec32 orthologEc-07_007230.1
Exons5
Model size759
Cds size759
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1008.152.1prot_D-dichotoma_M_contig1008.152.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1008 230405..237904 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927485.7850935-CDS-D-dichotoma_M_contig1008:230404..2305701622927485.7850935-CDS-D-dichotoma_M_contig1008:230404..230570Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1008 230405..230570 +
1690797995.598066-CDS-D-dichotoma_M_contig1008:230404..2305701690797995.598066-CDS-D-dichotoma_M_contig1008:230404..230570Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1008 230405..230570 +
1622927485.803201-CDS-D-dichotoma_M_contig1008:231527..2317271622927485.803201-CDS-D-dichotoma_M_contig1008:231527..231727Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1008 231528..231727 +
1690797995.6129515-CDS-D-dichotoma_M_contig1008:231527..2317271690797995.6129515-CDS-D-dichotoma_M_contig1008:231527..231727Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1008 231528..231727 +
1622927485.8137708-CDS-D-dichotoma_M_contig1008:235756..2358691622927485.8137708-CDS-D-dichotoma_M_contig1008:235756..235869Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1008 235757..235869 +
1690797995.6223109-CDS-D-dichotoma_M_contig1008:235756..2358691690797995.6223109-CDS-D-dichotoma_M_contig1008:235756..235869Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1008 235757..235869 +
1622927485.823833-CDS-D-dichotoma_M_contig1008:236195..2363531622927485.823833-CDS-D-dichotoma_M_contig1008:236195..236353Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1008 236196..236353 +
1690797995.6309574-CDS-D-dichotoma_M_contig1008:236195..2363531690797995.6309574-CDS-D-dichotoma_M_contig1008:236195..236353Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1008 236196..236353 +
1622927485.8356893-CDS-D-dichotoma_M_contig1008:237782..2379041622927485.8356893-CDS-D-dichotoma_M_contig1008:237782..237904Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1008 237783..237904 +
1690797995.6397507-CDS-D-dichotoma_M_contig1008:237782..2379041690797995.6397507-CDS-D-dichotoma_M_contig1008:237782..237904Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1008 237783..237904 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1008.152.1

>prot_D-dichotoma_M_contig1008.152.1 ID=prot_D-dichotoma_M_contig1008.152.1|Name=mRNA_D-dichotoma_M_contig1008.152.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=253bp
QHFPFPTLLRPVIVASRKCRCPGPDPLSHSRLNTSIERRRDAMSIKNVVF
IIAMEAEANPLIERLALVEDTTKFPPAAPSKYFGGTYQGAAVHVVTNGKC
KRFGVDQIGTVAAGLSTWLSIETLKPDLVINAGTAGGFKKHGTVIGDAFL
STRVRNHDRRIPIPGFKEFGVGDYESHPTPKMLDALGFKTGVVTTGNSFD
HTETDDRIMEENDARVKDMEAAAVAWACEQHGTPMFCLKVVTDLVDGGGV
GEV
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mRNA from alignment at D-dichotoma_M_contig1008:230405..237904+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1008.152.1 ID=mRNA_D-dichotoma_M_contig1008.152.1|Name=mRNA_D-dichotoma_M_contig1008.152.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=7500bp|location=Sequence derived from alignment at D-dichotoma_M_contig1008:230405..237904+ (Dictyota dichotoma ODC1387m male)
CAGCATTTCCCGTTCCCCACATTGTTACGCCCTGTCATTGTTGCGAGCAG
AAAGTGTAGGTGTCCGGGTCCTGACCCTTTGTCACACAGTCGGCTCAACA
CGTCGATAGAGCGGAGAAGGGACGCCATGTCGATCAAGAACGTCGTGTTT
ATCATTGCCATGGAGGGTGAGAACCAGAAGATGACGAACAGGAGGGAAAC
ATGAGCGTCTCCAAGAGAACACCAGTTGGCGCTAAGTCGCAGGGAAGCCC
TCCGTTCTTGTATTTCTCCCACTCTGCTGTTCATCGATACCTGGGTTCAC
CGACCAGCTGGTATGAACACGCTGATCACTCGTCCTGCGATAGACATGTT
TTCGAACCCGTTTCGTGCTCTTGATGACGAGCACACTTGAGTGAAGAATA
GACTCCAGTAAATCATTCAATCATTGAAGTATTCAAAGCGCATACCACAT
CTTTCGGGATGTTGAAGATGGGTAGTATGGGCGCCAAAGCTTACTTGTTC
CCCAGATTAAGGTATATTTCATGTCAAGCTTTGCTACGTGAAGAAGCCGT
GCCGCAGGCATCCGTTACACCTGGTCTTTCGCTACTCTAGCATTATGTCT
GAGTCGCCGAGAGCAGCCGGTGCTCAGGGGAACGTGGGCAGAATCCGAAT
GTTAACCATGAACGTAGCTATTTGCATTACGAAGCGTTGAGAGGACATCG
ACTTGAGTAGAGAAGGCTGCTGTATCCATCGTAGGATCACGAAGGACTCC
CATGCTCGGTACTGTACACGCAAGCATCCGTTACACCTGGTCTTTCGCTA
CTCTAGCATTATGTCTGAGTCGCCGCGAGCAGCCGGTGCTCAGGGGAACG
TGGGCAGAATCCGAATGTTAACCATGAGCGTAGCTATTTGTATTACGAAG
CGTTGAGAGGACATCGACTTGAGTAAAGAAGGCTGCTGTATCCATCGTAG
GATCACGAAGGACTCCTATGCTCGGTGCTGCACACGCAATAAGCAATGGT
TGCCCTGCCCTCGGAGAGGGCGAGCACGATAGACATTTCCGTCTACCGTA
CACCCTCAGAAATCACTCGGCCAGGTGTTTACACGAACCCCTCGCTTCCC
TCGTGATGGTGTATATCCAACAGCGGAAGCTAATCCTCTCATCGAGCGCC
TAGCCCTTGTTGAGGATACGACCAAGTTCCCTCCCGCGGCTCCGTCCAAG
TACTTCGGAGGCACGTACCAGGGGGCTGCGGTTCATGTGGTCACGAACGG
AAAGTGCAAGCGTTTCGGGGTGGATCAGATCGGCACGGTGGCTGCCGGCT
TGTCAACATGGTTATCGATTGAGGTAAGTTATCATGCTAACCCATCGTGG
TAGCCTATCACGAACTCTACGGTCGTGGCATGGTGAGTGATGTCTCGTGT
GTAGTATCCCAGATGATCTACGGGACCGGGTTCTGCACCCTACCCGAGTC
CAAGAAAGGGACGTTATCGGGTACTGCAGCACCATGACATTTTCCGTTCC
GTTACCGTTCAATATCGATCCGGGAGGTAGAGCAGACCAACAACGCTCCT
GGAAACTAAACATGCGAGGCGATGGTAAGCGCGTGCTTGCCGAAACGGGT
GACGCTGACACTCGACGGAACACTCCCCGCCCGCACGGGTGTCATCAAAG
CGCATAGAAAGATATGGTTATCGATATGCTCCTACCGCCACTGGCGTTTG
AGTAGGGCCGTCGCGTGTCTGCCTTAGCCCCGGAGCCACCGCCAGAGTGT
GATCGTTTCCCTAGGATAATTCTGTCGAAGATGCGCGTGGGCAGAATGGG
ATATCGGTGCGGCCTTCTGCTGCCAGTCGGTGCGGCCTTCTGCTGCCAGC
AGTCCCGTCATGGATCACGGACGTGTTCGGGTCGACAATTCGAAAGGATG
AACATAGCGGGCAGTAGTAAAGTTTCCACGCGCCGTCATGGTGCAGACGA
CCCCGTGTCCTTACCTGAACAAGGACCTGTTGCACGCGATGAGATGGGAA
GACTTCCCGATCGGCGAGGTCGAGCATCTATCGTCTCTGTCGAGACGGAA
GACATGGACGAGGGAGGATCGCGCAAGGGGCAGCATACGGCGAACCGTAC
TTCGCCGCCACAACGAGTACTGGGGTCTTCGTCTCAGCTTGGCGACGGGT
GGCCATGGTGGACACACCTGTTTTCGTCGCTTCTCGGATTGACATCGATG
ATCGCCCCTTAGGCCGCTGCATCGCCGCCCCCAGGGTCCTGCAATAGAGG
ACGCCGCGTCACTTCCTCTGGGGCACATTCTGGGAACATCGCCACTCGAA
CTCTTTTCTCTGTCTTCCCGAAGGGTTGCCGGTCGTTTTCAAACTACTAG
AGAGCGGCAACTCTCGAACTTCCTCCATCATATCGCATAACCATTCCAGA
TTGGGTGCATATCGCCTCTCCTTTTCAATCTCGCGACGAAGGGTTCCAGA
ATCCCCCAAATACTCCGGGACTATCATAAGTCGTCGTGTCGTCGTGTCGT
CGTGTCGTCGTGGCTAATGAGCATGGCAGAAGTTACAACGCAGCCGGACA
TATTTGCCGCGTTTGCAAGTCCCGCGTGGTAAAGTCCAACATGAGCGGGC
TTCGCATTACGCAGGGTCAGCCACAGACAGTTCCGCAACCTCGTGGAGGA
ACGATTCCCCTCTGCATCCGGGACATAACACTCTCGAATCTCTGCAGCTT
TGTAGGGTAGCGCTAGCGAGGAGCAAGAGTGTACATAGGAGCGTTGTCTT
CAACAATTTCGATTCCGGTTGGCTAGATTGCCGAGCGTCTGGAGTAGACG
AAAATTGTCATTTGGCTCTACGTTTGAGAGCTACGGATGACGGCCCAACG
GGGAGACTGTCGAAACGCGTCTTCAACGTCCGCGATCTTTTCTTCCTGTG
CGTCGAGTCTCTTCCTTGAGGGGGACAACGCTCGTCTTTTCCTTCCTACC
ACGCTCTTTCCTCGCTCACCACGTATAGCGGGTGTGTCTCGCGAAACGCT
GACTCGGAAGGAGGCATCCATCTCATCTCGTCCACCTTTTCTCCATTCCT
CCCAATTTTTTCCAGCTCATCCAGCTCATCTACTTCGTCTATCTTCCTCG
GGTCGATTGTAGATTGTGTCGCGGCTGGGCAAGGTCAACGTTGTCGCTGC
CTTTGCTCCGTATCCACCATCCGGATACACCTTCCATCCTTCCGGGCGAC
GAGCCTGGCGTGGTCCCGCCCGACCCCCGCGGCGGGCATTCGTATCTCTA
GCTGCGTAGTGCCCTGAGATGGCCTCACCCGCACCCGCTCTCCAACTCCC
GTTGATTATCTCGTCTCGCTCGATCGTGCTCGCATGGGTATGGCTTGCCG
TTGTCTTCTCTCGTCCCCCAGCCACAGGCTTAACTGTTCGCTTCTGCTTG
CGTGAAACTGAACCGAGTCGTCGAGACCTCGTCCGCTGCTTGCCGAGATG
TGATGCCTGAATCCAAAGGCGAAGTAGCCAAAAACCGTGGATTCCAGAGG
TCTCTCGGAAAGGGGGGGCTATTTGTTAGGAAAGGGGGGGCGCCATAAGG
TTGACCGTCAGTTGTTGTTGTGGTTGTGGTTGTGGTGGTGGTGGTGGTGG
TTGTGGTGGTGGTGGTTGTGGTGGTGGTGGTTGTGGTGGTGGTGGTGGTG
GTGGTTGTAGGTTGTGGTTGTGGTAGTGGTTGTTGTGCTTGTGCTTGTGC
TTGTGGTGGTGGTGGTTGTTGTGATTGTGCTTGTGCTTGTGGTTTGTGGT
TGCGGTGGTGGTGGTTGCGGTGGTGGTTGTGGTGGTGGTTATGCTTGTGC
TTGTGATTGTGCTTGTGCTTGTTGGCGTGGTCGTGGTTGTGGTTGTGGTT
GTGGTGGTGGTGATTATGGTTGTTGTTGTGCTTGTGCTTGTTGTTGTGCT
TGTGCTTGTTGTTGTGCTTGTGCTTGTTGTGGTTGTTGTTGTGGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGGTGGTGGTGATGGCGGTGGCGGTGGC
GGTGGCAGTGACGTTGTGTGCGCGTGCATGTTGTATCAGTCACAGAGATT
AATTGTTATGCTGTAACCCTTCTTTTCAGACGGTTCTATAACGCCGCTGT
CTTCCTCGTACGTCCGCTGCTGACCCTCGGACCTGAATCCAATGGACTGA
ATCTCAATCACAATGGATGAACCGTTTTCTCCTCCTAGCGTATGTGAGGA
TCGTATCAACCTCGTGCAGGGCTTTCTGGATCTGATACTCTTGTTCGTTC
ACTAAATGCGTTGCGGGTGTTCCACTCCACCCCACTTCTTCGGATGATTT
CGGCGATCCCCCGCTATCTCACTCTTCCCGGCGCGGTTCGCAGATGCTTT
CCCCGTTTGGTCAGGCGGCTGTAGTGAGGATTCCCTTGTCTTTGCACTAC
CGTCTTGACTCTGCGCGTGATTTCGTCCCACCTAGCGCATCGTGCTATTG
CGGAGGGCTCTCTGCATGGCGGTTGGGAGAGGCCTCCAGATTTGTCCTCT
TTCCTGCCGCTGGAGAGCTAGGTACCCTCCCTTGCCCCCCCCCCCCGCCG
ACATAAAGGTTCCAGTCGCCTCCGCTTTGACTTTCCCAACTCCCCTTTCT
CTTATCGTGCATACTGGAGTCGCCTCCGAAGGTCCTTGAAGCTCGGGAAA
GATTGATTTCGGTGGGGCGATAGATGCCGCCATATTTGGTTTCTCTCTGT
GTGTATGTATCTGTCTTGTAAATGTTACCCCACTGAGAGTCAGAATTGGC
CTTTGCCCTTCCTGTCAGTCTCTGTTGCACATCTTGTATAAGTTCCCTCA
CGTCGGGTTGACTTGGTCACGTATTACCATACCGCGTCCCGAATACGGTT
TCAGACGTTCTCTTGCGCAACACCTCAATAATCTTTTTGCCGTTCATGTC
TTGAAGCTGGGCCAATCGTCCGTCTCCCGTGGCTGGGGCCATTCGGCGGC
TCTGTTATGTCCCCTCACGATGAATCCCTTTCCCGCCTGCCATTCAGTTT
CAGAAACAAGCGTTGCCCCTAACCAGCTCCCCCGATAACGCAGTCATGGC
GACGCTCCTCTAGTGTCTCTTGCCCCCAGAGCTTCCTAGCCGTTGGTTTG
CGGGTCTCTGTCCTCCAGCGTTTCGCAGCATGCCGTATGCTAAGACATTC
TGCATTGCGATCGTCTTGCGCTTACGCCATGTCCCAGTCTCCTCCCCTTG
GGTGGCCAAGCTCCTTTCGTGTTCGGCCAGCATGTCGTCCTTATCCTTTC
CCGCCCTGAGCTTCCCTAGATCCCTCTCTACTTTGTTGACTCCCCTTGAG
CAGTGACCCTAGCACACGGTTCTTCGATCGTGCCCACGCCGGCTTCCTTC
AGACGCTGAAGCCGGACCTGGTGATCAACGCGGGCACGGCTGGCGGGTTC
AAGAAGCACGGCACCGTCATCGGTGACGCGTTCCTGAGCACGAGGGTCAG
AAACCACGACCGAAGGTAGGTGGATTTTCGGAGACGGGGGCGAGGTGCCT
TATTCCTTACCCCTGACCTCTCGGGCCTTGACATCCTCCACATGGTTGTA
GCGTGCTTTCGATCAGCATTCGTGGAGTGCGATGAAGCAGGCCGCTGGTC
CCATCGATGAAATACCTCAGCAGCCTCGTTCTTGCATGTGGTCGTAGGCA
GCGTGCCGGGGACAAGCCGACCCTGAAGCAGCGCATCGAGCCGAGCCCCG
TAAGCGAGTGTTTTCTCACCCCAACGATGAACACATGCGCTTCGGTCGAC
TCCCCGTCGCGTCGCAACGCCTCCCTCGCGCGTGTGCCCAGGATCCCTAT
CCCAGGTTTCAAGGAATTCGGCGTCGGCGACTACGAGTCTCATCCGACGC
CCAAGATGCTGGACGCTCTTGGTTTCAAGACGGGTGTGGTGACCACGGGG
AACTCCTTCGACCACACGGAGACGGATGACCGGATCATGGAAGAGAACGG
TTCGTGGGACCGACTCCATGTCGGGACGAACCTTTTGTCGGCATGGAAAG
TCGTATTCCGGTGTAGGGCACAAGGGTGGTCGTTCAGCGATACGCTGCGA
TAATCATGCCTTCGTGTTGGGCTTGCAAACTCCCCCTGTGCTCAATGTTC
ATGGACGAACGTGCTTGTTCGTATCGGGCCTGGCATGTTGGAACCTGCTG
CTACTCTGATCGCCAAGTTCTCACGTAGCACGTTTGTCGCCGAGATCAAA
TAGCATGGTCACGGGCACGCCATGGTCTGATCCATCGTGTGGTCAATCCG
AGCCCAATCCGAGCTAGCTCGTTTGCTGTCGCTTGTCACGGTACAGTATT
GGGCATAGTGTAGTGCTCACGGGTGTAGCGGAGTACGTGAGTAAAAAACG
GTCTAAATCTGCCCTCCCCCCAAAAAATCTTAAGCAAGATTTTGGGGCAC
GATTTGGACTTTTTTTTGTTTTTGTTTTCTATCAATGTACATTGGACCAT
CCTCGTGAGCAATTTTGTGGGGCTAGCCAGATTTGGACTTTTTCTTCCTC
ACGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTA
CTGTTCTCCGTTACACCCGTGAGCAATACTGTAGCACTTTAATGGCTCTT
CAACGTTTTATCTTGAATTTAGTATTGACCTATTCAAAGATCCATCAAAG
TGCTGTGCCCACTACTCTAATCGAAGTACTGTACTTGTAATGAGATATGC
TCAAAAACGCGAGGTGAAGGGGCGAAAGTGTTGAAGTGCGAAAGTGCAAA
AGTGTTGAAGTGCGAAAGTGCAAAAGTGCGTGTTTTGAAAGTGAACAGCT
ATCCGGTGCTCGGAATCGAGATTTCACACTGTCGAACAGAATCGAAGGCA
TGGCATGGCTTGGATTCACCCCACGTTCGGCATTTTTTTTCCGATGTTTT
TGTTTTTTTTTTTTTTTCATTCTGTTTCTCACAGGAACAATTCAATTCAA
GCTCTCGTTCATTTTTTAACGAGTCATTTGCCTGCTTGTGACGAGGATTT
GAGTTCCGCCCGCCGTGAAAGCCCTATCTCTCGTGGCTGTGCCCTTCCAA
TTTTCTTGTCCTTTCCGCTCATCGCGGTGCCGCGCCCTGCCTTGTTCAGT
TTTGTTCTGTTCTCTGATTAAAGTTGCGCAGTGCTTGTACTACTGGACAA
ACGAACCAATTCACCTGACTGGCTTCGTTTCAATAAGTGTAGGTCAATTG
GACCGATGATCTGTTTTTTTATTGCTTCAGCTTCCGATATTCATATTCGA
TTCATCTTCGTGTTTTTATTTTTTGTTTCGTTTTATTTTATTTTTCGTTC
TGCGTGGTGGTCGCGGCGGCGGTCGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGGGGGGTCACAACGTACGTTCGCAGACGCGCGGGTCAAGGACATGGA
GGCGGCCGCAGTCGCCTGGGCCTGTGAGCAGCATGGGACGCCCATGTTCT
GCCTAAAGGTGGTGACGGACCTTGTGGACGGTGGAGGTGTTGGGGAGGTG
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig1008:230405..237904+

>mRNA_D-dichotoma_M_contig1008.152.1 ID=mRNA_D-dichotoma_M_contig1008.152.1|Name=mRNA_D-dichotoma_M_contig1008.152.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1518bp|location=Sequence derived from alignment at D-dichotoma_M_contig1008:230405..237904+ (Dictyota dichotoma ODC1387m male)
CAGCATTTCCCGTTCCCCACATTGTTACGCCCTGTCATTGTTGCGAGCAG
AAAGTGTAGGTGTCCGGGTCCTGACCCTTTGTCACACAGTCGGCTCAACA
CGTCGATAGAGCGGAGAAGGGACGCCATGTCGATCAAGAACGTCGTGTTT
ATCATTGCCATGGAGGCAGCATTTCCCGTTCCCCACATTGTTACGCCCTG
TCATTGTTGCGAGCAGAAAGTGTAGGTGTCCGGGTCCTGACCCTTTGTCA
CACAGTCGGCTCAACACGTCGATAGAGCGGAGAAGGGACGCCATGTCGAT
CAAGAACGTCGTGTTTATCATTGCCATGGAGGCGGAAGCTAATCCTCTCA
TCGAGCGCCTAGCCCTTGTTGAGGATACGACCAAGTTCCCTCCCGCGGCT
CCGTCCAAGTACTTCGGAGGCACGTACCAGGGGGCTGCGGTTCATGTGGT
CACGAACGGAAAGTGCAAGCGTTTCGGGGTGGATCAGATCGGCACGGTGG
CTGCCGGCTTGTCAACATGGTTATCGATTGAGCGGAAGCTAATCCTCTCA
TCGAGCGCCTAGCCCTTGTTGAGGATACGACCAAGTTCCCTCCCGCGGCT
CCGTCCAAGTACTTCGGAGGCACGTACCAGGGGGCTGCGGTTCATGTGGT
CACGAACGGAAAGTGCAAGCGTTTCGGGGTGGATCAGATCGGCACGGTGG
CTGCCGGCTTGTCAACATGGTTATCGATTGAGACGCTGAAGCCGGACCTG
GTGATCAACGCGGGCACGGCTGGCGGGTTCAAGAAGCACGGCACCGTCAT
CGGTGACGCGTTCCTGAGCACGAGGGTCAGAAACCACGACCGAAGACGCT
GAAGCCGGACCTGGTGATCAACGCGGGCACGGCTGGCGGGTTCAAGAAGC
ACGGCACCGTCATCGGTGACGCGTTCCTGAGCACGAGGGTCAGAAACCAC
GACCGAAGGATCCCTATCCCAGGTTTCAAGGAATTCGGCGTCGGCGACTA
CGAGTCTCATCCGACGCCCAAGATGCTGGACGCTCTTGGTTTCAAGACGG
GTGTGGTGACCACGGGGAACTCCTTCGACCACACGGAGACGGATGACCGG
ATCATGGAAGAGAACGGATCCCTATCCCAGGTTTCAAGGAATTCGGCGTC
GGCGACTACGAGTCTCATCCGACGCCCAAGATGCTGGACGCTCTTGGTTT
CAAGACGGGTGTGGTGACCACGGGGAACTCCTTCGACCACACGGAGACGG
ATGACCGGATCATGGAAGAGAACGACGCGCGGGTCAAGGACATGGAGGCG
GCCGCAGTCGCCTGGGCCTGTGAGCAGCATGGGACGCCCATGTTCTGCCT
AAAGGTGGTGACGGACCTTGTGGACGGTGGAGGTGTTGGGGAGGTGACGC
GCGGGTCAAGGACATGGAGGCGGCCGCAGTCGCCTGGGCCTGTGAGCAGC
ATGGGACGCCCATGTTCTGCCTAAAGGTGGTGACGGACCTTGTGGACGGT
GGAGGTGTTGGGGAGGTG
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