mRNA_D-dichotoma_M_contig1003.121.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1003.121.1
Unique NamemRNA_D-dichotoma_M_contig1003.121.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Match: D8LPQ2_ECTSI (ARFRP1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPQ2_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 3.130e-125
Identity = 177/194 (91.24%), Postives = 183/194 (94.33%), Query Frame = 2 
Query:   32 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKAIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQFDIHNATRPPFRLQACSGLTGDGISEGVHWIVDEAKKRARPRVDA 613
            MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMK IFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYAD+HGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMM ANKQDLPEAIS  DI VQFD+H  T+  FRLQ CSGLT DG++EG+HWIVDEAKKRARPRVDA
Sbjct:    1 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADISVQFDMHKITKVAFRLQPCSGLTCDGVAEGIHWIVDEAKKRARPRVDA 194
[Close]
BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Match: A0A835YY21_9STRA (ARFRP1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY21_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.490e-85
Identity = 121/189 (64.02%), Postives = 153/189 (80.95%), Query Frame = 2 
Query:   32 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKAIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQFDIHNATRPPFRLQACSGLTGDGISEGVHWIVDEAKKRAR 598
            MFSL+AGL RYL SKT++NVLILGLD AGKTTLLEQMK IFKKV GIPP+KIPPT+GLNV KMD+GG  +TFWD+GGQVR+R+LWE+YYAD+H LI VMDSAD  RFEEA++AF  V+EQ ELH +PL++ ANKQD+  A S  DI  QFD H     PFR+ A S L+G+G++EG+ W++ +A+++ +
Sbjct:    1 MFSLLAGLWRYLTSKTQVNVLILGLDDAGKTTLLEQMKGIFKKVPGIPPAKIPPTIGLNVAKMDIGGVSVTFWDVGGQVRLRALWERYYADAHALICVMDSADAARFEEAQLAFHAVREQAELHALPLLLLANKQDVAGACSGGDIAAQFDAHKVMGVPFRVHAVSALSGEGVNEGISWLIAKAREKTQ 189
[Close]
BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Match: A0A7S2BA16_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA16_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.120e-83
Identity = 118/195 (60.51%), Postives = 154/195 (78.97%), Query Frame = 2 
Query:   14 GASGGPMFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKAIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQFDIHNATRPPFRLQACSGLTGDGISEGVHWIVDEAKKRAR 598
            G   G MFSLI+G  +  F+K E+ VLILGLD+AGKTTLLEQMK +F K QGIPP +IPPT+GLN+GKMDVG C++ FWDLGGQVR+RS+WEKYYA++HG++FV+DSADVGR EEA++AFD V+E  EL G+P+++ ANKQDLP A++ +DI + F+IHN      RLQ  S LT +GI +GV W+V+E++   R
Sbjct:   54 GGRSGTMFSLISGFWKIFFAKVEVQVLILGLDHAGKTTLLEQMKGLFNKQQGIPPERIPPTIGLNIGKMDVGTCRVIFWDLGGQVRMRSIWEKYYAEAHGMVFVIDSADVGRMEEAKLAFDAVREHEELRGIPVLLLANKQDLPGAMAIEDIAMHFEIHNLPPRLVRLQPASCLTCEGIEDGVRWVVEESRTADR 248
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BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Match: W7TPL1_9STRA (1-family small gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPL1_9STRA)

HSP 1 Score: 252 bits (644), Expect = 9.650e-82
Identity = 118/190 (62.11%), Postives = 153/190 (80.53%), Query Frame = 2 
Query:   32 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKAIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQFDIHNATRPP-FRLQACSGLTGDGISEGVHWIVDEAKKRAR 598
            MFSL+AG I+YLFSKTE++VLILGLD+AGKTTLLEQ K IF+KVQGIPP KI PTVGLNVGKMD+ GC +  WDLGGQVR+RS+W+KYYAD+HG++FV+D+ADVGRFEEA++AF ++ +  +L  VP+++FANKQDLP A+S +D+   F+I    R    ++ +CS LT +G+  GV W+V EAK  AR
Sbjct:    1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190
[Close]
BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Match: A0A8J6CF14_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CF14_DIALT)

HSP 1 Score: 211 bits (537), Expect = 1.840e-65
Identity = 99/191 (51.83%), Postives = 139/191 (72.77%), Query Frame = 2 
Query:   32 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKAIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQFDIHNATRPP--FRLQACSGLTGDGISEGVHWIVDEAKKRAR 598
            MFSLIAGL  YLF K E  VLILG+D+AGKTT LEQMK +F+K++ + P KIPPTVGLN+G+M+VG  KL FWDLGGQ  +R +WEKY+A+ HGL++V+D+AD  RF+E+R  F+ + +  +L GVP+++ ANKQDL  A + D+I  +F   +   P   +R++  S +TG GI++G+ W+VD  K  +R
Sbjct:    1 MFSLIAGLFEYLFKKAEFQVLILGVDHAGKTTALEQMKGLFQKIEPLAPEKIPPTVGLNIGRMEVGRVKLIFWDLGGQSGLRGIWEKYFAEVHGLVYVIDAADDQRFDESRRIFEALVKHPDLAGVPVLILANKQDLHSAATIDEIDERFGFGSLCAPSQQYRIEPVSAITGSGIADGITWMVDMLKLSSR 191
[Close]
BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Match: A0A4D9CTS6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTS6_9STRA)

HSP 1 Score: 223 bits (568), Expect = 5.820e-63
Identity = 104/175 (59.43%), Postives = 137/175 (78.29%), Query Frame = 2 
Query:   77 TEINVLILGLDYAGKTTLLEQMKAIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQFDIHNATRPP-FRLQACSGLTGDGISEGVHWIVDEAKKRAR 598
            ++++VLILGLD+AGKTTLLEQ K IF+KVQGIPP KI PTVGLNVGKMD+ GC +  WDLGGQVR+RS+W+KYYAD+HG++FV+D+ADVGRFEEA++AF ++ +  +L  VP+++FANKQDLP A+S +D+   F I    R    ++  CS LT +G+  GV W+V EAK  AR
Sbjct: 1022 SQLHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFKIDRVLRHRVIQVHPCSALTCEGLESGVRWLVQEAKGLAR 1196
[Close]
BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Match: A0A7S2WHH1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WHH1_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.680e-62
Identity = 104/211 (49.29%), Postives = 141/211 (66.82%), Query Frame = 2 
Query:   32 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKAIFKKVQG-IPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQFDI------------------HNAT--------RPPFRLQACSGLTGDGISEGVHWIVDEA 583
            MFSL++G  ++LFSKTEI +LI+GLD+AGKTTLLEQMK IF+K    IP  KIPPTVGLN+G+MD+  C++ FWDLGGQ+ +RS+W+KYY+++HGLIFV+DSAD+ RFEEA+ A +++    EL GVPL++ ANKQDL  +   D+I   F +                   NA+        R   +LQ  S LT  GI +G+ W+V+ A
Sbjct:    1 MFSLLSGFFKWLFSKTEIQILIIGLDHAGKTTLLEQMKGIFQKAANQIPLDKIPPTVGLNIGRMDIDNCRVIFWDLGGQIALRSIWDKYYSEAHGLIFVLDSADIDRFEEAKAAMESIASHPELAGVPLLVCANKQDLATSRGYDEINEYFRVVSESLGKIGSNADSEQNSMNASEHILSLGKRRERKLQPVSALTCSGIEDGIRWLVNAA 211
[Close]
BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Match: A0A484KDI7_9ASTE (Uncharacterized protein n=5 Tax=Convolvulaceae TaxID=4118 RepID=A0A484KDI7_9ASTE)

HSP 1 Score: 203 bits (516), Expect = 3.260e-62
Identity = 94/189 (49.74%), Postives = 134/189 (70.90%), Query Frame = 2 
Query:   32 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKAIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQFDIHNATRPPFRLQACSGLTGDGISEGVHWIVDEAKKRAR 598
            MFSL  GL +Y+FSKTE +VLILG+D AGKTTLLE++K+ F  ++G+PP +I PTVGLN+G+++V   KL FWDLGGQ  +RS+WEKYY ++H ++FV+D+A   RFE+A+ A + V    +LHG PL++ ANKQDL EA S +++    D+       +++QA S   G GI E V+W+VD  ++  R
Sbjct:    1 MFSLFYGLWKYVFSKTEFHVLILGIDKAGKTTLLEKLKSQFLNIEGLPPDRIVPTVGLNIGRVEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVLFVVDAACPSRFEDAKSALEKVLRHEDLHGAPLLILANKQDLAEAASAEELDRYLDLKKLGERVYKIQAVSAYEGIGIKESVNWLVDAMERSKR 189
[Close]
BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Match: A9NYS0_PICSI (Uncharacterized protein n=3 Tax=Pinidae TaxID=3313 RepID=A9NYS0_PICSI)

HSP 1 Score: 202 bits (513), Expect = 9.570e-62
Identity = 91/189 (48.15%), Postives = 132/189 (69.84%), Query Frame = 2 
Query:   32 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKAIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQFDIHNATRPPFRLQACSGLTGDGISEGVHWIVDEAKKRAR 598
            MFSL  GL +YLFSK E +VLILG+D AGKTTLLE++K ++   +G+PP +I PTVGLN+G+ +    KL FWDLGGQV +R++WEKYY ++H +I+V+D+A   RFE+ + A + V    +LHG P++++ANKQDLP A+S +D+    D+      P+  QA S   G GI +G++W+VD  ++  R
Sbjct:    1 MFSLFYGLWKYLFSKIEFHVLILGIDKAGKTTLLEKLKTMYSDSEGLPPDRIVPTVGLNIGRTEALKSKLVFWDLGGQVGLRTIWEKYYEEAHAVIYVVDAACQSRFEDTKSALEKVLRHEDLHGAPILIYANKQDLPGAVSAEDLARYLDLKELNERPYMFQAISAYDGLGIKDGINWLVDAMERSKR 189
[Close]
BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Match: A0A067F975_CITSI (Uncharacterized protein n=19 Tax=rosids TaxID=71275 RepID=A0A067F975_CITSI)

HSP 1 Score: 201 bits (512), Expect = 1.400e-61
Identity = 91/189 (48.15%), Postives = 133/189 (70.37%), Query Frame = 2 
Query:   32 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKAIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQFDIHNATRPPFRLQACSGLTGDGISEGVHWIVDEAKKRAR 598
            MFSL  GL +Y+F+KTE +VLILG+D AGKTTLLE++K+++  V+G+PP +I PTVGLN+G+++V   KL FWDLGGQ  +RS+WEKYY ++H ++FV+D+A   RFE+++ A + V    +L G PL++ ANKQDLP+A+S D++    D+          +A SG  G GI E V W+V+  ++  R
Sbjct:    1 MFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKVLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEAVSGYDGFGIKESVEWLVEVMERSKR 189
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1003.121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPQ2_ECTSI3.130e-12591.24ARFRP1, ARF-like Ras superfamily GTPase n=2 Tax=Ec... [more]
A0A835YY21_9STRA1.490e-8564.02ARFRP1, ARF-like ras superfamily GTPase n=1 Tax=Tr... [more]
A0A7S2BA16_9STRA1.120e-8360.51Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W7TPL1_9STRA9.650e-8262.111-family small gtpase n=1 Tax=Nannochloropsis gadi... [more]
A0A8J6CF14_DIALT1.840e-6551.83Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A4D9CTS6_9STRA5.820e-6359.43Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2WHH1_9STRA1.680e-6249.29Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A484KDI7_9ASTE3.260e-6249.74Uncharacterized protein n=5 Tax=Convolvulaceae Tax... [more]
A9NYS0_PICSI9.570e-6248.15Uncharacterized protein n=3 Tax=Pinidae TaxID=3313... [more]
A0A067F975_CITSI1.400e-6148.15Uncharacterized protein n=19 Tax=rosids TaxID=7127... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1003contigD-dichotoma_M_contig1003:107706..112181 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score362.1
Seed ortholog evalue1.7e-97
Seed eggNOG ortholog2880.D8LPQ2
Preferred nameARFRP1
KEGG koko:K07952
GOsGO:0000139,GO:0003674,GO:0003824,GO:0003924,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0005829,GO:0006810,GO:0006886,GO:0006892,GO:0006893,GO:0006950,GO:0007154,GO:0007165,GO:0007275,GO:0007369,GO:0008104,GO:0008150,GO:0009653,GO:0009790,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016197,GO:0016462,GO:0016482,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0023052,GO:0031090,GO:0031984,GO:0032501,GO:0032502,GO:0032588,GO:0033036,GO:0033365,GO:0033554,GO:0034067,GO:0034613,GO:0034976,GO:0042147,GO:0042175,GO:0042886,GO:0043001,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0048598,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0061951,GO:0065007,GO:0070727,GO:0071702,GO:0071705,GO:0072657,GO:0072659,GO:0090150,GO:0098588,GO:0098791,GO:0098876,GO:1990778
EggNOG free text desc.Golgi to plasma membrane protein transport
EggNOG OGsKOG0076@1,KOG0076@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04031,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionARFRP1, ARF-like Ras superfamily GTPase
Ec32 orthologEc-18_002040.1
Exons7
Model size778
Cds size585
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927481.8448112-UTR-D-dichotoma_M_contig1003:107705..1078671622927481.8448112-UTR-D-dichotoma_M_contig1003:107705..107867Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1003 107706..107867 -
1690797993.0685022-UTR-D-dichotoma_M_contig1003:107705..1078671690797993.0685022-UTR-D-dichotoma_M_contig1003:107705..107867Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1003 107706..107867 -
1622927481.9384124-UTR-D-dichotoma_M_contig1003:112150..1121811622927481.9384124-UTR-D-dichotoma_M_contig1003:112150..112181Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1003 112151..112181 -
1690797993.18352-UTR-D-dichotoma_M_contig1003:112150..1121811690797993.18352-UTR-D-dichotoma_M_contig1003:112150..112181Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1003 112151..112181 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927481.8608768-CDS-D-dichotoma_M_contig1003:107867..1079431622927481.8608768-CDS-D-dichotoma_M_contig1003:107867..107943Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 107868..107943 -
1690797993.0816066-CDS-D-dichotoma_M_contig1003:107867..1079431690797993.0816066-CDS-D-dichotoma_M_contig1003:107867..107943Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 107868..107943 -
1622927481.8717878-CDS-D-dichotoma_M_contig1003:108183..1083491622927481.8717878-CDS-D-dichotoma_M_contig1003:108183..108349Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 108184..108349 -
1690797993.0940313-CDS-D-dichotoma_M_contig1003:108183..1083491690797993.0940313-CDS-D-dichotoma_M_contig1003:108183..108349Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 108184..108349 -
1622927481.8833878-CDS-D-dichotoma_M_contig1003:109332..1094411622927481.8833878-CDS-D-dichotoma_M_contig1003:109332..109441Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 109333..109441 -
1690797993.1293702-CDS-D-dichotoma_M_contig1003:109332..1094411690797993.1293702-CDS-D-dichotoma_M_contig1003:109332..109441Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 109333..109441 -
1622927481.8946056-CDS-D-dichotoma_M_contig1003:109806..1098621622927481.8946056-CDS-D-dichotoma_M_contig1003:109806..109862Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 109807..109862 -
1690797993.1404076-CDS-D-dichotoma_M_contig1003:109806..1098621690797993.1404076-CDS-D-dichotoma_M_contig1003:109806..109862Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 109807..109862 -
1622927481.90483-CDS-D-dichotoma_M_contig1003:110390..1104751622927481.90483-CDS-D-dichotoma_M_contig1003:110390..110475Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 110391..110475 -
1690797993.149946-CDS-D-dichotoma_M_contig1003:110390..1104751690797993.149946-CDS-D-dichotoma_M_contig1003:110390..110475Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 110391..110475 -
1622927481.9148428-CDS-D-dichotoma_M_contig1003:111898..1119881622927481.9148428-CDS-D-dichotoma_M_contig1003:111898..111988Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 111899..111988 -
1690797993.1598215-CDS-D-dichotoma_M_contig1003:111898..1119881690797993.1598215-CDS-D-dichotoma_M_contig1003:111898..111988Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 111899..111988 -
1622927481.925104-CDS-D-dichotoma_M_contig1003:112147..1121501622927481.925104-CDS-D-dichotoma_M_contig1003:112147..112150Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 112148..112150 -
1690797993.174656-CDS-D-dichotoma_M_contig1003:112147..1121501690797993.174656-CDS-D-dichotoma_M_contig1003:112147..112150Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1003 112148..112150 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1003.121.1prot_D-dichotoma_M_contig1003.121.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1003 107868..112150 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1003.121.1

>prot_D-dichotoma_M_contig1003.121.1 ID=prot_D-dichotoma_M_contig1003.121.1|Name=mRNA_D-dichotoma_M_contig1003.121.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=195bp
MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKAIFKKVQGIPPS
KIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADSHGLIFVMD
SADVGRFEEARMAFDTVKEQGELHGVPLMMFANKQDLPEAISPDDIRVQF
DIHNATRPPFRLQACSGLTGDGISEGVHWIVDEAKKRARPRVDA*
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mRNA from alignment at D-dichotoma_M_contig1003:107706..112181-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1003.121.1 ID=mRNA_D-dichotoma_M_contig1003.121.1|Name=mRNA_D-dichotoma_M_contig1003.121.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=4476bp|location=Sequence derived from alignment at D-dichotoma_M_contig1003:107706..112181- (Dictyota dichotoma ODC1387m male)
GTCTAGCTGAAGAGGGGCGAGTGGTGGGCCTATGGTGAGCATATTGAGCT
CTCTGCTGTTCGATGAGGACTCTTGGAATTTTTACTGGGTGATCATGAGC
TTCTTTCTCTTTCGCTTTTCGACTGCTTTTGCGCTTCTTTTCGAGCTTCT
GAATAATTGACTGCTGGGCGCTCGTCCTCGCTTGTTGTCGCAGTTTTCCC
TCATCGCCGGATTGATTCGGTATCTCTTCTCCAAGACAGAGATAAATGTT
CTTATTCTTGGGCTGGACTACGCTGGAAAGACGGTGAGATGGGTTCACTA
TAGTATCGCTAGGTCCCCATTCTATGCTCCTCGCTGTCGCCCAGCCCATG
CCTACCATCTCTATCCTGTCTCTTGCTCCCCTTCATTTGAAGCGTAACAT
CTTGTGACTGAGGTATGTTTCCACAAGAAATTTTTCATCACTGGCGTGAA
CTTAGGTACCATGCACCAACAACTACACACCCCACCATGCATTGCTCCCA
ATACAATGAGGATGTCTCGTCATTGGTAGTTGCTGGATCTAGACACCAAA
AGTCCGTTTTCAACATTCGTTGGAGAGTTGAAACAAATGAGCACACGGAA
CATCATGGGGTGGGAAAGAGTTGTTTGGATAAAGGAGGGTGCAGAATCTA
TTTTCCTTACAGCTGAGTGAACATGACTAGAGGACGGGAAGCAGAGGTAA
AGTGTACTACTGGCGTTCGGGTGCTACATCTCATTCCGAAGTTTTTCCCT
GTTGAGGCGTAGTATGTGTTCCTGGACATGATGCAATGGTCTGCGTTGGA
GGTTATCAGGCAACACCCGTTTCTTCCGTCTGCGGGATCTGGAGTAACAA
GGGAAGTGGTTTCCGTGAACAAAGCCGAGAATTGCAGTGGATTTGCAGGG
CGTTGATGTTCGTATGCTCTAGTATGCCGGCAAGGAATGGGTGCTTTTGC
GTCGATGCTTGGGCGTGGTGTTCAATGGGGTCAACTGAGGGTGCAAGGCA
AACGGCGGTGCATTCCAGTCGGGATGCCCCAATGGAATTGGCTAAAATAT
ATAGCACGAACCCCAGCGAAGGGTCCGCCTCTCGCAAGTCTCAGTTTGCA
ATGGGGGCGGAATGGGTGAATAGTTTCCAAAACGTGGTACTGTAGATGTC
ATAGGAGATGGTGGGGTCGAGCTCTAGCGAGAGCTCGCACAAATCTACGC
CGTTCTTGAGAGCGTGTGTTGCCAGCGATAGCCAACGATGTTCTTGTGAA
CTCAGGGGGATCCAAGTGCATGGCCCTGCTGGGCTATGAAAAGTGTTGTC
TTGGAGTACGAGTATTCATCCCTAAGGGATTAGGACTCCAAACTGGAGAC
ATGGAGGGCGTGCTTGGTGGCAAGATAGGGTGCTAAGAGCGTAGTTTATC
GGCATGGCTAGGGTAGAGCTGACGTTCAATCCAAAGACGGAGTCAAACCA
TATCCGTTCCGGTGAGCGCTTCCAGTAGTCGATCTCCATCGTAGCCACTG
TGGCACGAGATGTGCGCTCTTCGAGTGAGCGCGGCAGTTTGTTTGCCTGC
CGGGAGTCCAGACTGAGCAGGAATCATCACCCCTCAAGATCTTGTATGGT
AGAAAGGAACGAACCCGGAAGAAACAAGAGAGTTTTCGGCGAGGCCAGGA
TTAATGATCCCTTCCAAGCTTTCGTGACCCCGTTACCGCCGACGTGACTC
GGGCAGACGCTGTTGGAGCAGATGAAAGCTATTTTCAAGAAGGTGCAGGG
GATACCTCCGTCCAAGATCCCGCCAACTGTTGGATTGAATGGTGAGGGTG
CTTCTCGCGGAAGTTGACTTGTCTCACTTGTCTCACTTTTGTGACTTGTC
GTCTCGAGCACGGCACGGCAAGGCAAGGCAAGGCAAGGCCAGGCAAGGCA
AGGCAAGGCCAGGCAAGGCAAGGCCAGGCAAGGGCAGGCAAGGGCAAGCC
AGAGCGGAAAGATGGGCGGAGTTGGAATTATCATCATTTCTACCGAATGG
AGGGAGTAAGACGGAGTGTGGCATGATTTTGCTTAGACGGATAAAGTTGT
ACACCGCTGCTCCCTTAGGTTCGATGGATACAGTTTGGGACGCGTTGGTG
ACTGAATCCATGACTGTCCAATGTTGAGTGACGCTGGGGCCTAACATTCC
ACCCGAGGACATCCGCGGCGTCAATTCGCATGTAGTCGGCGCTTTCATAA
TCCAATAGAAGTGCATTTGTTGCTAATCTATCGGCTCCGATATCAGTCTG
CATAGGTCTCCTATCTATGCCCACGCGTTCGCACACTTGCTCTCTCTCTC
TCTCTCTCCCTGTCTACAGTGGGGAAGATGGATGTCGGAGGCTGCAAGCT
CACCTTCTGGGACTTGGGGGGGCAAGTGAGTCAAATAATCAGTCGGTCGG
TATCTCACGATAAATAGGGCTAGGTGTGGCATGAGCCAGCCTGCTACCCC
CAAATTAGGCTTATTATTGTTTTTCGGGCGTGGTTTGGCACACTCATCTC
TTGTCGGGATTGCACCTTGCGCGCGCATGCTACCGCCCCAGAAGCGGTTG
CAGTATGATCGATGTCTGATGAAGCCCTTTCCGTGTCCCGAATGACTAGC
GTGGGTGAGCTTGTCTTGATGGTCGTGGTCGAATGAATTGGTCGTGGATA
ATGGGGGAGTCGAGGATGAACACCCAATGCGTCGGTCTCTACTCCGAATC
TCATGCAGGAGCCCACTGGGCGTGGTTCGGCTGAATGCAGGTGCGCGTGA
GATCGTTGTGGGAGAAATACTATGCTGACTCGCACGGGTTGATCTTTGTA
ATGGATTCTGCGGACGTTGGGCGATTCGAGGAGGCCAGGATGGCTTTCGG
TGAGTCAACAACGTCCTCGTCCAATGCGTCTGGACGCGTTTATGTTCCCT
GCTGAGTCACGATTTGTCGGGGGTGGGGGTGATTAGTTGCAACTCGTTGG
CGTCCAGGCGTCTGCGTGCGTTAGCTATTATTCTTGGGGGAAAGGCATAA
GGAAATGGATATTCTTCGCTAGGTATGGAAGCTGGAGGATGTATGGGATG
CTAGAGTGATTCGAGTCGCAAAGTGAATCTTCATTCCATTTACGTGTACT
TGTACAAAGAGAACGAGTCGAATCTTTAGTTCTGATGACTCGAAGCCCTT
GAGATGAGTGATGTACAACGGCAGTGGTTAGAATCACCCAAAAGACGGAG
ATTGGAATGGATACCAATCTGAATGTTCATTTTTTACATTCTCAATGACT
CCACGGGAGTCGGTGGAGTCAGTGGAGTCAGTGGCGGACAAATAAGCTGA
AGGGCAAATCGACGGCGGATAGGATAGCAAAGTTCCGCAGACAGCGTTGG
GTTGGGTTGTGAGACAAGAGGGTTTTGTGTGTTTTTTTCCGTTGTATAGC
CAGCCATCCAGCTAGGCACCTCGAAAAATCTTGCAGTCTCATGATGTGTT
CAGATCCGTACACCCATTCTCAGGTACCGCCTTAATGCTGCCAAACTGGC
AGGCATCAATCCTGCCAGGTGAGGTTCAAGGGCATGTTGATGGAAGGCTG
CGGGGCGAATGTCCACCATCTCCCCCAGCATGGTTTCCAGTTAACCCTCT
CTATTCCTCTTCCAAGTATCTAACTAGCCAACCCCTAGTGCTGCGTGCAC
TCTTGCGAGCGGATGTTCATGATGGAATTCAACCTGACTAGGCATTCGAT
ATGCGGCTGTATCGGAAAGGCAACATGGTGGGAAGGAGAGTAACGCACGA
ACGAACTCGCATGATCCACTAAATAGTCATGACTGCGTTATGTTGGCCCC
ACGGGGCGTGTGATTGTGTCGTGTCGATCCAGATACGGTGAAGGAGCAGG
GTGAGCTCCATGGGGTGCCGTTGATGATGTTCGCGAACAAGCAAGATTTA
CCGGAGGCTATTTCGCCAGATGATATACGTGTGCAGTTCGATATACACAA
CGCTACGAGGCCGCCTTTCCGATTACAAGCTTGCAGCGGGCTTACAGGGT
GAGTCCTGGCCATGTCATCCAATATGAAGTCGCGGTCGCGCACATGGTTG
TCTCTTTCCTGCCGAGGGTAGCCAGCGGAGCTCCTGTCATCAGTATTCAA
TTCGACTGGTACATGTCATGCGCCAGTGTTCCATGCAGGAGGGTAAAGGG
TATGTCGCGACACTATGATAGTGCTACGGCTTTCTCTCACTCGTCCCGTT
CTCGCTTTGCTCGATGCGTGCCGGAACGTATCCCGTAGTGACGGCATATC
GGAGGGCGTCCACTGGATTGTGGACGAGGCAAAGAAACGGGCGCGGCCTC
GAGTGGATGCGTAGCAGTATACCCTGGCTCAGTTAGTTGACTTGAGCCCG
TCCATTCATGACGATGACAATGACGATGGCAATGACAATGGCAACGATGA
TAGGACAGACGCGGCGGGCGCAGGGCGGGGGCCTGTCTGTCTATCTGTCT
GCTTGTCTGCCTGCTTCACTTGTTGC
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig1003:107706..112181-

>mRNA_D-dichotoma_M_contig1003.121.1 ID=mRNA_D-dichotoma_M_contig1003.121.1|Name=mRNA_D-dichotoma_M_contig1003.121.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1170bp|location=Sequence derived from alignment at D-dichotoma_M_contig1003:107706..112181- (Dictyota dichotoma ODC1387m male)
ATGATGTTTTCCCTCATCGCCGGATTGATTCGGTATCTCTTCTCCAAGAC
AGAGATAAATGTTCTTATTCTTGGGCTGGACTACGCTGGAAAGACGTTTT
CCCTCATCGCCGGATTGATTCGGTATCTCTTCTCCAAGACAGAGATAAAT
GTTCTTATTCTTGGGCTGGACTACGCTGGAAAGACGACGCTGTTGGAGCA
GATGAAAGCTATTTTCAAGAAGGTGCAGGGGATACCTCCGTCCAAGATCC
CGCCAACTGTTGGATTGAATGACGCTGTTGGAGCAGATGAAAGCTATTTT
CAAGAAGGTGCAGGGGATACCTCCGTCCAAGATCCCGCCAACTGTTGGAT
TGAATGTGGGGAAGATGGATGTCGGAGGCTGCAAGCTCACCTTCTGGGAC
TTGGGGGGGCAATGGGGAAGATGGATGTCGGAGGCTGCAAGCTCACCTTC
TGGGACTTGGGGGGGCAAGTGCGCGTGAGATCGTTGTGGGAGAAATACTA
TGCTGACTCGCACGGGTTGATCTTTGTAATGGATTCTGCGGACGTTGGGC
GATTCGAGGAGGCCAGGATGGCTTTCGGTGCGCGTGAGATCGTTGTGGGA
GAAATACTATGCTGACTCGCACGGGTTGATCTTTGTAATGGATTCTGCGG
ACGTTGGGCGATTCGAGGAGGCCAGGATGGCTTTCGATACGGTGAAGGAG
CAGGGTGAGCTCCATGGGGTGCCGTTGATGATGTTCGCGAACAAGCAAGA
TTTACCGGAGGCTATTTCGCCAGATGATATACGTGTGCAGTTCGATATAC
ACAACGCTACGAGGCCGCCTTTCCGATTACAAGCTTGCAGCGGGCTTACA
GGATACGGTGAAGGAGCAGGGTGAGCTCCATGGGGTGCCGTTGATGATGT
TCGCGAACAAGCAAGATTTACCGGAGGCTATTTCGCCAGATGATATACGT
GTGCAGTTCGATATACACAACGCTACGAGGCCGCCTTTCCGATTACAAGC
TTGCAGCGGGCTTACAGGTGACGGCATATCGGAGGGCGTCCACTGGATTG
TGGACGAGGCAAAGAAACGGGCGCGGCCTCGAGTGGATGCGTAGTGACGG
CATATCGGAGGGCGTCCACTGGATTGTGGACGAGGCAAAGAAACGGGCGC
GGCCTCGAGTGGATGCGTAG
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