mRNA_D-dichotoma_M_contig1002.116.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1002.116.1
Unique NamemRNA_D-dichotoma_M_contig1002.116.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Match: D7G854_ECTSI (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G854_ECTSI)

HSP 1 Score: 656 bits (1693), Expect = 1.830e-222
Identity = 322/495 (65.05%), Postives = 388/495 (78.38%), Query Frame = 1
Query:  205 ARRLWSTPGILNPKRGHLDNLSEPSSGSLKWYSCGPTVYDSAHLGHARTYVSLDIIRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTRWPEIAVMAGEFEKEFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAEGGIYFDVEKMGSDYGKLGIGGTDSTTPVEGQEDGESDARGKRSHKDFALWKKAKPDEPWWDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIAQCEAYCFDG--ESGAAQGDNASARVGLDGSGRPWVQHWIHTGHLHIEGRKMSKSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEARIIRGRMERFLGMADTVLRGATTDQ-SESSRRWGDKEKWLQEEISACRRGVHLALSEDFDTPKVVRHLATLCAITSTHMNSETMGDAGPVRAAAKCVSDTLGMLGVG-SSKSSASASHGVGERLWDEGSEHEGGGDKG 1677
            A R    P + N   G L+ L +PS+G LKWYSCGPTVYDSAHLGHARTYVSLD+IRR+L D+F FDVTYALG+TDVDDKIIARARE GL  WPE+A MA EFE++F++DM DLGVR PDA+ RVT+H+PDI+AYIQRI+ENGM YEA GG+YFDVE MG  YGKLG+  + STTP   +E+G S+ RGKRSHKDFALWK AK DEP W++PFGRGRPGWHIECSAMTHSLFG +LD+HSGG+DLKFPHHTNEIAQCEA+   G   + AA GD      G+ G  +PWV+HWIHTGHL+IEG KMSKSLKNFVT+REYL+GH+ G+ AAAEDFRMFCLMHKYSS+VT SEDRMEEA ++RGR++RFL +AD  +  A  ++ ++++ RWG KEKWL EE S CRR V LALS+DFDTP+ VRHLA+LCA+ S H+   T GD GPV +A    ++TL +LGVG SS  +A+A  G+GE          GGG++G
Sbjct:   38 AARAPVQPAVWNTVNGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGLREWPEVAEMAAEFERQFLEDMSDLGVRPPDALTRVTDHIPDIVAYIQRILENGMGYEAAGGVYFDVEGMGGAYGKLGVKASSSTTP---EEEGGSELRGKRSHKDFALWKTAKADEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGVDLKFPHHTNEIAQCEAHACGGVAATAAATGDG-----GVGGERKPWVRHWIHTGHLNIEGLKMSKSLKNFVTIREYLEGHSAGQEAAAEDFRMFCLMHKYSSNVTFSEDRMEEASVVRGRLQRFLALADVTIGAARKNRPADTAVRWGKKEKWLVEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELTQGDLGPVVSARNFAAETLALLGVGESSTGAAAAGGGLGEMKG-------GGGERG 517          
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Match: A0A836CJU0_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU0_9STRA)

HSP 1 Score: 447 bits (1149), Expect = 5.220e-140
Identity = 241/492 (48.98%), Postives = 306/492 (62.20%), Query Frame = 1
Query:  205 ARRLWS--TPGILNPKRGHLDNLSEPSSGSLKWYSCGPTVYDSAHLGHARTYVSLDIIRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTR--WPEIAVMAGEFEKEFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAEG---GIYFDVEKMGSDYGKLGIGGT---DSTTPVEGQEDGESDARGKRSHKDFALWKKAKPDEPWWDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIAQCEAYCFDG-----------ESGAAQGDNASARVGLDG--------SGRPWVQHWIHTGHLHIEGRKMSKSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEARIIRGRMERFLGMADTVLRGATTDQSESSRRWGDKEKWLQEEISACRRGVHLALSEDFDTPKVVRHLATLCAITSTHMNSETMGDAG---PVRAAAKCVSDTLGMLGV 1584
            AR L S   P +     G L+ L  PS G LKWY+CGPTVYD+AHLGHARTYVSLD++RR+L DHF + + YA+GVTDVDDKIIARARE G T   W   A +A  +E  FM+DMD LGV+RPDAV RVTEH+  I  Y++R++  G AY+ EG   G+YF V  +G+ YGKLG  GT   D++ P             KR   DFALWK AK  EP WD+PFGRGRPGWHIECSAMTH+LFG  LD+H+GGIDLKFPHHTNEIAQC+A+   G              AA+  N    +G            G  W +HW+HTGH+HIEG KMSKSLKNF+TV+EY++ H  G   A++DFR+FCLMH+Y++ VT S  ++ EA  +R R +RF  MA  V   A      + RRWG +E  L  +++ C + VH AL  D DTP  +R L  L A    +  ++  G +    PV + A+ V   L  +G+
Sbjct:  112 ARHLSSHELPRLHTSLTGDLEQLPPPSRGPLKWYNCGPTVYDAAHLGHARTYVSLDVLRRLLTDHFGYRILYAMGVTDVDDKIIARAREGGATGADWGPYASLARRWEASFMEDMDTLGVQRPDAVLRVTEHMDAIHDYVERLLHLGAAYKVEGPQGGVYFSVTSLGAGYGKLGNSGTVEVDASAPAVPASSAAPTESAKRDPADFALWKAAKEGEPSWDSPFGRGRPGWHIECSAMTHALFGSDLDVHTGGIDLKFPHHTNEIAQCDAHASRGLCCAPPPSPPHTGTAAEPPNTRGIIGAPNPDARSGGQQGGEWCRHWLHTGHVHIEGLKMSKSLKNFITVKEYIEAHGGGAVQASQDFRIFCLMHRYTAPVTFSYTKIAEAGAVRARFQRFFSMAAHVGANAA-----ALRRWGAEEADLHAKLADCTQQVHGALGCDADTPAALRLLQELSAAACKY--ADVRGASAVPEPVLSCARYVERVLSAMGL 596          
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Match: A0A5D6Y496_9STRA (Cysteine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y496_9STRA)

HSP 1 Score: 372 bits (955), Expect = 1.760e-112
Identity = 208/477 (43.61%), Postives = 286/477 (59.96%), Query Frame = 1
Query:  196 ATPARRLWSTPGILNPKRGHLDNLSEPSSGSLKWYSCGPTVYDSAHLGHARTYVSLDIIRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTRWPEIAVMAGEFEKEFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAE--GGIYFDVEKMGSDYGKL----GIGGTDSTTPVEGQEDGESDARG----KRSHKDFALWKKAK-PDEPWWDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIAQCEAY--CFDGESGAAQGDNASARVGLDGSGRPWVQHWIHTGHLHIEGRKMSKSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEARIIRGRMERFLGMADTV-LRGATTDQSESSRRWGDKEKWLQEEISACRRGVHLALSEDFDTPKVVRHLATLCAITSTHMNSETMGDAGPVRAAAKCVSDTLGMLGV 1584
            A+  R   +   + N  RG L+ L + SS  LKWY+CGPTVYD AHLGHAR YVS D++RR+L   F F V   +GVTDVDDKII RA+ERG+      A +A + E+ F +DM  L V+ P A+ RV+EH+ DI+AY+QRI  NG AYEA    G+YF    +G  YGKL       G++S    + +E G  D+      KR  +DFALWK AK PDEP WD+P+GRGRPGWHIECSAMTH + G  LD+H+GGIDLKFPHH NEIAQCEA+  C    +G+A G++             W +H++H GHL+I+G KMSKSLKNF++++++L  H+      A+ FR+FCL  KY S++  SEDR+ +A  I  R++ F          G   D   +S+R    +  L + +   + GV  AL  DFDTP  +  L  L + ++ ++     G +  + A +  V + L + G+
Sbjct:   24 ASAQRAFSANVRVFNSLRGALEPLDD-SSKQLKWYACGPTVYDRAHLGHARAYVSQDVLRRVLERRFGFHVRLVMGVTDVDDKIIQRAKERGVG----FAALARDEERAFFRDMAALNVQPPTAITRVSEHMSDIVAYVQRIQANGFAYEAPDGSGVYFHTRALGDAYGKLDPRRSTSGSNSADASQSEEHGGGDSEAAAGVKRDPRDFALWKTAKAPDEPAWDSPWGRGRPGWHIECSAMTHYVLGAKLDVHTGGIDLKFPHHNNEIAQCEAHSCCSPLPAGSAAGNDDD-----------WCKHFVHFGHLYIQGLKMSKSLKNFISIQDFLATHS------ADHFRLFCLQFKYRSNLHFSEDRVRDAVAIADRVKSFFRSVQAYGASGDDDDDVRASKRCERADLALLDALFDAKAGVDAALRNDFDTPHALSLLLELVSRSNEYLLGRPDGPSEVLLAVSSYVLEVLDLFGL 478          
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Match: A0A024UW95_9STRA (Cysteine--tRNA ligase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UW95_9STRA)

HSP 1 Score: 357 bits (917), Expect = 1.020e-107
Identity = 195/454 (42.95%), Postives = 268/454 (59.03%), Query Frame = 1
Query:  235 LNPKRGHLDNLSEPSSGSLKWYSCGPTVYDSAHLGHARTYVSLDIIRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTRWPEIAVMAGEFEKEFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAEGGIYFDVEKMGSDYGKLGIGGT---DSTTPVEGQEDGESDARGKRSHKDFALWKKAK-PDEPWWDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIAQCEAYCFDGESGAAQGDNASARVGLDGSGRPWVQHWIHTGHLHIEGRKMSKSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEARIIRGRMERFLGMADTVLRGATTDQSESSRRWGDKEKWLQEEISACRRGVHLALSEDFDTPKVVRHLATLCAITSTHMNSETMGDAGPVRAAAKCVSDTLGMLGV 1584
             N   G LD     SS  LKWY CGPTVYDSAHLGHAR+YVS DI+RR+L  HFH ++   +G+TDVDDKIIA A  +  T    +  +A   E  F++++ DL V R  ++ RV+EH+P+IIAYIQ +  NG AY    G+YFD   MG+ YGKL        D+  P +G   GE     KR+ +DFALWK +K P+EP W++P+GRGRPGWHIECSAMTH + G  +D+HSGG+DL+FPHH NEIAQC+AY                          W +H++H GHL+I+G KMSKSLKNF+T+   L+ ++      A+ FR+FCL +KY+ +V  SEDRM +A  I  R   FL    + ++ A    S  SRR    +  +   ++ C++ V +A+  DFDTP+ ++HL  L + T+             +   A  + DTL + G+
Sbjct:   31 FNSLTGQLDAFPT-SSSPLKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTQHFHQEIFLVMGMTDVDDKIIAAAASQQTT----MTNIARTNEAAFLRNLADLNVLRVSSITRVSEHIPEIIAYIQGLGANGFAYVTSDGVYFDTVAMGAKYGKLAPNTPQEYDNVVPEDGAVGGE-----KRNVRDFALWKLSKSPEEPGWESPWGRGRPGWHIECSAMTHHVLGDAIDVHSGGVDLRFPHHNNEIAQCDAYHH------------------HACDHTWCKHFVHFGHLYIKGLKMSKSLKNFITIDSLLETYS------ADTFRVFCLQYKYNMNVHFSEDRMRDASAIYQRFLSFLQTLQSHVKAAA--HSPLSRRVDGVDHTVLAALAQCKQDVDIAMRHDFDTPRALQHLLDLISHTNKTWKDHPSMSVEVLCTVATYIVDTLTLFGL 448          
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Match: W4H874_9STRA (Cysteine--tRNA ligase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H874_9STRA)

HSP 1 Score: 356 bits (913), Expect = 5.730e-107
Identity = 207/471 (43.95%), Postives = 277/471 (58.81%), Query Frame = 1
Query:  202 PARRLW---STPGI--LNPKRGHLDNLSEPSSGS-LKWYSCGPTVYDSAHLGHARTYVSLDIIRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTRWPEIAVMAGEFEKEFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAEGGIYFDVEKMGSDYGKLGIGGTDSTTPVEGQEDGESDARGKRSHKDFALWKKAK-PDEPWWDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIAQCEAYCFDGESGA--AQGDNASARVGLDGSGRPWVQHWIHTGHLHIEGRKMSKSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEARIIRGRMERFLGMADTVLRGATTD-QSESSRRWGDKEKWLQEEISACRRGVHLALSEDFDTPKVVRHLATLCAITSTHMNSETMGDAGPVRAAAKCVSDTLGMLGV 1584
            P RRL    S P +  +N   G LD    PSS S LKWY CGPTVYDSAHLGHAR+YVS DI+RRI+  HFH D+   +G+TDVDDKIIA A  +  +    +A +A   E  F++++  L V R  ++ RV+EH+P+II YIQ +  NG AY    G+YFD   MGS YGKL        T +   EDG      KR+ +DFALWK +K PDEP W++P+GRGRPGWHIECSAMTH + G  +D+HSGG+DL+FPHH NEIAQC+AY    ++G     G       G+D     W QH++H GHL+I+G KMSKSLKNF+T+   L  ++      A+ FR+FCL +KY+ +V  S DRM +A  +  R   F     + ++       SE +RR    +  + + ++ C+  V  AL  DFDTP  ++HL  L   T+             + A A  V DTL + G+
Sbjct:   14 PMRRLSTGVSKPPLVAMNSLTGRLDTF--PSSSSPLKWYVCGPTVYDSAHLGHARSYVSQDILRRIVTQHFHQDIFLVMGMTDVDDKIIAAASAQQTS----MANVARHHETAFLRNLAALNVLRVSSITRVSEHIPEIIGYIQGLDSNGFAYATSDGVYFDTVAMGSSYGKLAPSTPQEYTDIV-LEDGAVGGE-KRNVRDFALWKLSKTPDEPGWESPWGRGRPGWHIECSAMTHHVLGGSIDVHSGGVDLRFPHHNNEIAQCDAYHHH-QAGRYLMVGSCVCFYSGVD---HTWCQHFVHFGHLYIKGLKMSKSLKNFITIDALLANYS------ADAFRLFCLQYKYNVNVHFSHDRMRDANAVYHRFHSFFHTLQSHVKATEAGGASEHARRVDAADFRVLDALAQCKLEVDSALRLDFDTPGALQHLLELVTATNKAWTDRPAMSVEVLCAVATYVMDTLALFGL 466          
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Match: A0A485L702_9STRA (Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L702_9STRA)

HSP 1 Score: 353 bits (905), Expect = 7.810e-106
Identity = 205/473 (43.34%), Postives = 273/473 (57.72%), Query Frame = 1
Query:  235 LNPKRGHLDNLSEPSSGS-LKWYSCGPTVYDSAHLGHARTYVSLDIIRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTRWPEIAVMAGEFEKEFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAEGGIYFDVEKMGSDYGKLGIGGTDSTTPVEGQED----------------GESDARGKRSHKDFALWKKAK-PDEPWWDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIAQCEAYCFDGESGAAQGDNASARVGLDGSGRPWVQHWIHTGHLHIEGRKMSKSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEARIIRGRMERFLGMADTVLRGATTDQSESSRRWGDKEKWLQEEISACRRGVHLALSEDFDTPKVVRHLATLCAITSTHMNSETMGDAGP---VRAAAKCVSDTLGMLGVGS 1590
            LN   G LD    P S S LKWY CGPTVYDSAHLGHAR+YVS DI+RRI+  HFH D+   +G+TDVDDKIIA A     T  P  A+ A   E  F++D+  L V R  ++ RV+EH+PDII YIQ +  NG AY    G+YFD   +G  YGKL      + +  +  +D                GE     KR+ +DFALWK +K P+EP W +P+GRGRPGWHIECSAMTH + G  +D+HSGG+DL+FPHH NEIAQC+ Y                       G  W +H++H GHL+I+G KMSKSLKNF+T+   L      R  +A+ FR+FCL +KY+ +V  SEDRM +A  +  R++ FL    + ++    D   +S+R  + ++ L   +  C+ GV  AL  DFDTP  ++H+  L  +T+T+   +  GDA P   V A A  V D   + GV S
Sbjct:   33 LNSLTGQLDPF--PLSPSPLKWYVCGPTVYDSAHLGHARSYVSQDILRRIVTKHFHQDIFLVMGMTDVDDKIIAAA---AATNQPMDAI-ARAHESAFLRDLAALNVLRVSSITRVSEHIPDIINYIQGLEANGFAYATADGVYFDTVALGDAYGKL------APSTAQDYQDIVVXXXXXXXXXXXIGGE-----KRNVRDFALWKLSKTPEEPGWSSPWGRGRPGWHIECSAMTHHVLGGAIDVHSGGVDLRFPHHNNEIAQCDGYHH------------------HVPGHTWCRHFVHFGHLYIKGLKMSKSLKNFITIDALL------RTYSADAFRLFCLQYKYNINVHFSEDRMRDANTVYQRIQTFLQTVQSYVKAREVDPH-ASKRMDESDRALLATLDQCKHGVDAALRRDFDTPDALQHVLEL--VTATNKAWKERGDAMPSEVVCAVATYVMDVFSLFGVDS 461          
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Match: W7T9L1_9STRA (Cysteine--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9L1_9STRA)

HSP 1 Score: 348 bits (894), Expect = 1.340e-104
Identity = 197/426 (46.24%), Postives = 257/426 (60.33%), Query Frame = 1
Query:  262 NLSEPSSGSLKWYSCGPTVYDSAHLGHARTYVSLDIIRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTRWPEIAVMAGEFEKEFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAEGGIYFDVEKMGSD--YGKLG----IGGTDSTTPVEGQEDGESDARG--------KRSHKDFALWKKAKPDEPW--WDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIAQCEAYCFDGESGAAQGDNASARVGLDGSGRPWVQHWIHTGHLHIEGRKMSKSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEARIIRGRMERFLGMADTVLRGATTDQSESSRRWGDKEKWLQEEISACRRGVHLALSED-FDTPKVVRHLATLCAI 1488
            +   PS  +LKWY+CGPTVYDSAHLGHARTYVS D+IRR+L D    DV + +G+TDVDDKI+ RA ER      +   +A  +E +F+ DM  L V  P A+ RVTEH+ DII YI++I  NGMAYE   G+YFDV        YGKL     +   ++  PV G+E+G+ +  G        K+  +DF LWK  KP E    WD+P+GRGRPGWHIECSAMT  L G HLDIHSGG+DL FPHHTNEIAQ +A+                R+  D +   WV  W+HTGHL+I+G KMSKSLKNF++VRE+L GH       A+DFRMFCL  ++ + V  SE  + EAR +R     F+ +A   +   + D     +RWG KE  +  E++  + GV  A  +   DTP+V+R L  L  +
Sbjct:   53 SAERPSLEALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERK----EDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPV-GREEGQQERIGVDVVGMDEKKDLRDFVLWKFNKPGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAF----------------RMSEDPA---WVGAWLHTGHLYIKGLKMSKSLKNFISVREFLAGHD------ADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRD---GCKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGL 445          
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Match: A0A3R6XT60_9STRA (Cysteine--tRNA ligase n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XT60_9STRA)

HSP 1 Score: 353 bits (907), Expect = 3.200e-104
Identity = 199/458 (43.45%), Postives = 273/458 (59.61%), Query Frame = 1
Query:  235 LNPKRGHLDNLSEPSSGS-LKWYSCGPTVYDSAHLGHARTYVSLDIIRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTRWPEIAVMAGEFEKEFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAEGGIYFDVEKMGSDYGKLGIGGTDSTTPVEGQEDGESDARGKRSHKDFALWKKAK-PDEPWWDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIAQCEAYCFDGESGA--AQGDNASARVGLDGSGRPWVQHWIHTGHLHIEGRKMSKSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEARIIRGRMERFLGMADTVLR----GATTDQSESSRRWGDKEKWLQEEISACRRGVHLALSEDFDTPKVVRHLATLCAITSTHMNSETMGDAGPVRAAAKCVSDTLGMLGV 1584
            +N   G LD    PSS S LKWY CGPTVYDSAHLGHAR+YVS DI+RRI+  HFH D+   +G+TDVDDKIIA A  +  +    +A +A   E  F++++  L V R  ++ RV+EH+P+II YIQ +  NG AY    G+YFD   MGS YGKL        T +   EDG      KR+ +DFALWK +K PDEP W++P+GRGRPGWHIECSAMTH + G  +D+HSGG+DL+FPHH NEIAQC+AY    ++G     G       G+D     W QH++H GHL+I+G KMSKSLKNF+T+   L  ++      A+ FR+FCL +KY+ +V  S DRM +A  +  R   F     + ++    G  ++++  +RR    +  + + ++ C+  V  AL  DF+TP  ++HL  L   T+             + A A  V DTL + G+
Sbjct:    1 MNSLTGRLDTF--PSSSSPLKWYVCGPTVYDSAHLGHARSYVSQDILRRIVTQHFHQDIFLVMGMTDVDDKIIAAASAQQTS----MANIARHHETAFLRNLAALNVLRVSSITRVSEHIPEIIGYIQGLDSNGFAYSTSDGVYFDTVAMGSSYGKLAPSTPQEYTDIV-LEDGAVGGE-KRNVRDFALWKLSKTPDEPGWESPWGRGRPGWHIECSAMTHHVLGGSIDVHSGGVDLRFPHHNNEIAQCDAYHHH-QAGRYLMVGSCVYFYSGVD---HTWCQHFVHFGHLYIKGLKMSKSLKNFITIDALLANYS------ADAFRLFCLQYKYNVNVHFSHDRMRDANAVYHRFHSFFHTLQSHVKATEAGGASERTPYARRVDAADFRVLDALAQCKLDVDSALRLDFNTPGALQHLLELVTATNKAWTDRPAMSVEVLCAVATYVMDTLALFGL 440          
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Match: A0A1V9YT50_9STRA (Cysteine--tRNA ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YT50_9STRA)

HSP 1 Score: 347 bits (889), Expect = 1.190e-103
Identity = 184/426 (43.19%), Postives = 255/426 (59.86%), Query Frame = 1
Query:  235 LNPKRGHLDNLSEPSSGSLKWYSCGPTVYDSAHLGHARTYVSLDIIRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTRWPEIAVMAGEFEKEFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAEGGIYFDVEKMGSDYGKLGIGGTDSTTPVEGQEDGESDARGKRSHKDFALWKKAKP-DEPWWDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIAQCEAYCFDGESGAAQGDNASARVGLDGSGRPWVQHWIHTGHLHIEGRKMSKSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEARIIRGRMERFLGMADTVLRGATTDQSESSRRWGDKEKWLQEEISACRRGVHLALSEDFDTPKVVRHLATLCAITSTHMNS 1509
            LN   G +D L    S  LKWY CGPTVYDSAHLGHAR+YVS DI+RR+L  +F  D+   +G+TDVDDKIIA A   G +    +  +A + E  F+ D+  L V R  A+ RV+EH+P+I+AYI  +  NG AY    G+YFD   +G DYGKL        T +   ++G      KR+ +DFALWK++K  DEP WD+ FGRGRPGWHIECSAMTH + G  +D+HSGGIDL FPHH NE+AQC+ Y                       G  W +H++H GHL+I+G KMSKSLKNF+++R++L        A+++ FR+FCL +KY+++V  S DRM +A ++   ++RF+    TVL  A +   E  RR    +  L   ++  +  V  A+ +DFDTP V+  L  L ++    + +
Sbjct:   29 LNSLSGKMDPLPL-GSRPLKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTTYFRQDINLVMGMTDVDDKIIATALREGRS----MEAVARQHEAAFLSDLAALNVLRASAITRVSEHIPEILAYITTLERNGFAYRTTDGVYFDTVALGDDYGKLAPNAATEATDIVVDDNGIGSE--KRNSRDFALWKRSKTTDEPGWDSDFGRGRPGWHIECSAMTHHVLGGAIDVHSGGIDLCFPHHNNEVAQCDGYHH------------------HTPGHTWCKHFVHFGHLYIKGLKMSKSLKNFISIRDFLSEPG----ASSDAFRVFCLQYKYNTNVHFSLDRMRDANVL---LQRFVSFFQTVL--ALSKSPELCRRLETPDDPLLLGLARAKTAVDRAMRDDFDTPSVLVELTALMSLVHRELQA 420          
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Match: K3W8N7_GLOUD (Cysteine--tRNA ligase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8N7_GLOUD)

HSP 1 Score: 345 bits (884), Expect = 6.650e-103
Identity = 186/443 (41.99%), Postives = 268/443 (60.50%), Query Frame = 1
Query:  289 LKWYSCGPTVYDSAHLGHARTYVSLDIIRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTRWPEIAVMAGEFEKEFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAE--GGIYFDVEKMGSDYGKLG------IGGTDSTTPVEGQEDGESDARGKRSHKDFALWKKAK-PDEPWWDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIAQCEAYCFDGESGAAQGDNASARVGLDGSGR--PWVQHWIHTGHLHIEGRKMSKSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEARIIRGRMERFLGMADTVLRGATTDQSESSRRWGDKEKWLQEEISACRRGVHLALSEDFDTPKVVRHLATLCAITSTHMNSETMGDAGPVRAAAKCVSDTLGMLGV 1584
            LKWY+CGPTVYD AHLGHAR YVS DI+RRIL   F ++V   +GVTDVDDKII RA+ER +      A +A + E+ F +DM+ L V+ P+ + RV+EH+ +II Y+++I +NG AYE+    G+YF  +++G  YGKL       +  +D        +D  S    K+  +DFALWK +K P EP WD+P+G GRPGWHIECSAMTH + G  LD+HSGGIDL+FPHH NEIAQCEA+                  G+D       W +H++H GHL+I+G KMSKSLKNF++++E+L+ H       A+ FR+FCL  KY S++  SEDR+ +A ++  R++ F         G+    +  S++  D +  L   + A +  +  AL +DF+TP V+  L  L + T+ ++       +  + + AK V + L +LG+
Sbjct:   16 LKWYACGPTVYDRAHLGHARAYVSQDILRRILEKRFRYNVFLVMGVTDVDDKIIKRAQERKI----HFAELARDEERAFFEDMEALYVQPPNTITRVSEHMSEIIEYVEKIQKNGFAYESSDGSGVYFHTKELGDAYGKLDPMRNAHVSASDVQASDVEDDDAASMVTAKKDRRDFALWKASKEPGEPSWDSPWGPGRPGWHIECSAMTHHVLGDKLDLHSGGIDLRFPHHNNEIAQCEAH----------------NCGVDHYHHHPEWCKHFVHFGHLYIQGLKMSKSLKNFISIKEFLEDHT------ADQFRLFCLQFKYRSNLHYSEDRIRDAVVLSDRIKSFFKSIHAY--GSERSSASKSKKCDDMDLNLLNTLFATKGSIDAALRDDFNTPLVLTLLLELISRTNQYLLDRLDAPSEVLGSVAKYVLEMLDLLGL 430          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1002.116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G854_ECTSI1.830e-22265.05Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CJU0_9STRA5.220e-14048.98Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A5D6Y496_9STRA1.760e-11243.61Cysteine--tRNA ligase n=1 Tax=Pythium brassicum Ta... [more]
A0A024UW95_9STRA1.020e-10742.95Cysteine--tRNA ligase n=2 Tax=Aphanomyces invadans... [more]
W4H874_9STRA5.730e-10743.95Cysteine--tRNA ligase n=6 Tax=Aphanomyces astaci T... [more]
A0A485L702_9STRA7.810e-10643.34Cysteine--tRNA ligase n=1 Tax=Aphanomyces stellatu... [more]
W7T9L1_9STRA1.340e-10446.24Cysteine--tRNA ligase n=1 Tax=Nannochloropsis gadi... [more]
A0A3R6XT60_9STRA3.200e-10443.45Cysteine--tRNA ligase n=5 Tax=Aphanomyces astaci T... [more]
A0A1V9YT50_9STRA1.190e-10343.19Cysteine--tRNA ligase n=1 Tax=Achlya hypogyna TaxI... [more]
K3W8N7_GLOUD6.650e-10341.99Cysteine--tRNA ligase n=1 Tax=Globisporangium ulti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1002contigD-dichotoma_M_contig1002:191911..198351 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score657.5
Seed ortholog evalue5.4e-186
Seed eggNOG ortholog2880.D7G854
Preferred nameCARS2
KEGG rclassRC00055,RC00523
KEGG koko:K01883
KEGG ReactionR03650
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.cysteinyl-tRNA aminoacylation
EggNOG OGsCOG0215@1,KOG2007@2759
EC6.1.1.16
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionCysteinyl-tRNA Synthetase
Ec32 orthologEc-12_001440.1
Exons6
Model size2998
Cds size1656
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1002.116.1prot_D-dichotoma_M_contig1002.116.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1002 191980..196503 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927481.2137983-UTR-D-dichotoma_M_contig1002:191910..1919791622927481.2137983-UTR-D-dichotoma_M_contig1002:191910..191979Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1002 191911..191979 +
1690797992.6439168-UTR-D-dichotoma_M_contig1002:191910..1919791690797992.6439168-UTR-D-dichotoma_M_contig1002:191910..191979Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1002 191911..191979 +
1622927481.280993-UTR-D-dichotoma_M_contig1002:196503..1965871622927481.280993-UTR-D-dichotoma_M_contig1002:196503..196587Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1002 196504..196587 +
1690797992.7099712-UTR-D-dichotoma_M_contig1002:196503..1965871690797992.7099712-UTR-D-dichotoma_M_contig1002:196503..196587Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1002 196504..196587 +
1622927481.2922406-UTR-D-dichotoma_M_contig1002:197162..1983511622927481.2922406-UTR-D-dichotoma_M_contig1002:197162..198351Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1002 197163..198351 +
1690797992.7174935-UTR-D-dichotoma_M_contig1002:197162..1983511690797992.7174935-UTR-D-dichotoma_M_contig1002:197162..198351Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1002 197163..198351 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927481.2249322-CDS-D-dichotoma_M_contig1002:191979..1925371622927481.2249322-CDS-D-dichotoma_M_contig1002:191979..192537Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1002 191980..192537 +
1690797992.660331-CDS-D-dichotoma_M_contig1002:191979..1925371690797992.660331-CDS-D-dichotoma_M_contig1002:191979..192537Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1002 191980..192537 +
1622927481.235476-CDS-D-dichotoma_M_contig1002:192911..1931111622927481.235476-CDS-D-dichotoma_M_contig1002:192911..193111Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1002 192912..193111 +
1690797992.6692598-CDS-D-dichotoma_M_contig1002:192911..1931111690797992.6692598-CDS-D-dichotoma_M_contig1002:192911..193111Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1002 192912..193111 +
1622927481.249318-CDS-D-dichotoma_M_contig1002:195043..1954511622927481.249318-CDS-D-dichotoma_M_contig1002:195043..195451Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1002 195044..195451 +
1690797992.6780617-CDS-D-dichotoma_M_contig1002:195043..1954511690797992.6780617-CDS-D-dichotoma_M_contig1002:195043..195451Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1002 195044..195451 +
1622927481.2603784-CDS-D-dichotoma_M_contig1002:195677..1958541622927481.2603784-CDS-D-dichotoma_M_contig1002:195677..195854Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1002 195678..195854 +
1690797992.6865845-CDS-D-dichotoma_M_contig1002:195677..1958541690797992.6865845-CDS-D-dichotoma_M_contig1002:195677..195854Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1002 195678..195854 +
1622927481.2695518-CDS-D-dichotoma_M_contig1002:196190..1965031622927481.2695518-CDS-D-dichotoma_M_contig1002:196190..196503Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1002 196191..196503 +
1690797992.6965423-CDS-D-dichotoma_M_contig1002:196190..1965031690797992.6965423-CDS-D-dichotoma_M_contig1002:196190..196503Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1002 196191..196503 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1002.116.1

>prot_D-dichotoma_M_contig1002.116.1 ID=prot_D-dichotoma_M_contig1002.116.1|Name=mRNA_D-dichotoma_M_contig1002.116.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=552bp
MTTLVRTSRTALSKATWRQSHLSVATAAVGRRAFSAEKGTDDATPARRLW
STPGILNPKRGHLDNLSEPSSGSLKWYSCGPTVYDSAHLGHARTYVSLDI
IRRILVDHFHFDVTYALGVTDVDDKIIARARERGLTRWPEIAVMAGEFEK
EFMKDMDDLGVRRPDAVARVTEHLPDIIAYIQRIIENGMAYEAEGGIYFD
VEKMGSDYGKLGIGGTDSTTPVEGQEDGESDARGKRSHKDFALWKKAKPD
EPWWDAPFGRGRPGWHIECSAMTHSLFGQHLDIHSGGIDLKFPHHTNEIA
QCEAYCFDGESGAAQGDNASARVGLDGSGRPWVQHWIHTGHLHIEGRKMS
KSLKNFVTVREYLDGHAEGRRAAAEDFRMFCLMHKYSSSVTLSEDRMEEA
RIIRGRMERFLGMADTVLRGATTDQSESSRRWGDKEKWLQEEISACRRGV
HLALSEDFDTPKVVRHLATLCAITSTHMNSETMGDAGPVRAAAKCVSDTL
GMLGVGSSKSSASASHGVGERLWDEGSEHEGGGDKGDGRPASIARSYRCD
C*
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mRNA from alignment at D-dichotoma_M_contig1002:191911..198351+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1002.116.1 ID=mRNA_D-dichotoma_M_contig1002.116.1|Name=mRNA_D-dichotoma_M_contig1002.116.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=6441bp|location=Sequence derived from alignment at D-dichotoma_M_contig1002:191911..198351+ (Dictyota dichotoma ODC1387m male)
CTCTGTTGCCTCGCGTGAGGTCCAACTCCAGTCCCTACAATCGGATGTGC AGGCGAATGACATAACCATATGACCACGCTTGTACGCACGAGTCGAACTG CTTTGTCCAAGGCCACATGGAGGCAGTCTCACCTTTCAGTAGCGACTGCT GCAGTTGGACGCAGAGCATTCAGCGCCGAAAAAGGAACAGACGATGCGAC GCCAGCGCGACGTCTTTGGTCGACACCGGGTATCCTCAACCCAAAAAGAG GACATCTGGATAACCTTTCAGAGCCATCTTCTGGAAGCCTGAAGTGGTAC TCATGCGGACCGACCGTGTATGACAGTGCGCATCTGGGACATGCTAGGAC TTATGTGTCCTTGGATATCATACGACGCATCTTGGTGGACCATTTCCACT TCGACGTCACATACGCACTTGGCGTCACAGACGTGGATGACAAGATAATC GCTCGGGCGCGCGAGCGAGGGCTTACGCGTTGGCCGGAGATTGCTGTTAT GGCCGGGGAGTTCGAGAAAGAGTTCATGAAAGACATGGATGACTTGGGCG TACGTAGGCCCGATGCAGTTGCCCGAGTCACGGAGCACCTTCCAGATATT ATCGCGTACATCCAGCGCATCATTGAGGTGCGCTCACCCTAAGACCGTAG TGGCGTTAGTTCAACACGAGATACAGCCTCGAACCATGCACGTGCCAGGA ACTTCTGTTCGGGGTTTGCAAAGGTACTGTTCCATCCAGCAAATTGTTTC AAGATGGTTGAGAGTGTGTTGATGGGCATGAGGTAACTTGATGTTTACTC GAAGCACGAAGTGCTACGAGTTGGTGCATTGCCCCAGCGGATCCCGTAGG TCAATAGCATCCGCTGGACCGCTTGGTTCGCGACTCTACAACAATGTTCC CTTCCTCCGATTACCACCCAGAATCGATGTTTCCCAATCTCAGGGGAGGA CCTCTTAAAAGTGGTGTGAACGCCAACTAACTCACTTGGCTCTCTCGGCA GAACGGTATGGCCTACGAAGCTGAGGGGGGCATCTATTTCGATGTGGAGA AAATGGGAAGCGACTACGGAAAGCTTGGGATCGGGGGCACGGACTCAACG ACGCCTGTCGAGGGGCAAGAGGACGGAGAATCCGACGCACGAGGAAAGCG GAGCCACAAGGATTTCGCTCTCTGGAAGAAAGCCAAACCTGACGAGCCAT GGTAATGAAAACTGGTTTTCTCCTGGACATTTGTGCTGTATACCGACCGG CGTCAAGACCGACGGGCTTGATAAAGTCACCCCCAAAATCGAAACAGAGC GGAGCCATTCCCCGGTCTCGTTCCATAGACGCCACGAGTCCTTGAAGCAT AGGGGTCGCTCTGGGACCCGAGGTCGCTCGTTTGAGGCATTTGGTGGAAG ATCTCGCGCAATTGTCGACCAGGGATAATCTTAGCGACTCTAAGCCTGCG TCGTGGTTGCAACGTGCACGGTACAGTCGATTCCCCATATTAATCCTTCC AGCGCCCAGTTGGGTCTTCTATCTTGATCTTAGTATGGGCCAACCCTCAG ATGAAGGCCACCACAAAGGTAGGAGTCAGGTAAAGAAATCCTATGGATAA CATCCCATCAAGAGTCCTTCGCGGTACATGAGAAATAAACCCATCCTCCG ACGGATGGGTTGAGCGTTTCACTCCGGTCTGCAAAGGCAATCCGGGAGGC GTTGACTTTTCTTTGGAATAAAAAGAAACCCGTCTCCGGTTGACCTACGC GTCATAAGGGTTAAGTTAAGGCCACCCCTCAGGTTAAGGCCACCACGACG GGCGCCTTCGTCTGAGGGGTCGACTTTAGTCCTCAAACACTGAAAAATGA TTCTCTGTAAATGCGAGTGATCATTTAGGGCCGTTTTTAACGACACATGT TTTCACGCTTGGATCCAAGTTTTGAACTTGGATCCAATCAAAAAGGCTGC GGAAACTTGTCCAAAAGGTTGGGTTCTAGGGGAAAGTCTGCGGAAACCTG TCCAGAAGCTTGGGTCCAAACGCTCCGAGGTTGCTTTCCTTCATTTGGAC CCAAGCTTCTGGACGGGCTTTCGCGTGGATCCAAGTTTCCAAATAATGTT TGAACAATTTTCGTGTCATTAAAAACGGGCCTTAGTCTGCGGCGTGGGCT TCTTGAGTGGTGAACGAAGCGATGCCGTTGGGGGATCTTCTGCCGGCGCC GGGAAGTGGGAATCTCCTTTCTGGTGACTCTCGGCGTCCCCAGGGAGATG ATTCATTCCGGTTGTTTCAGTCGAGTCCCAGCCCTCGATTAGGCGAGTTC TTCGGCGTCTCTTAAGGGGAGGAACAAGATGCCCACGGACTCAGGGTAGG CTTGCAAAGTGAAACCCCCGTAGGCCTCGAGATGAAAGTGGGTACGATAA GTTAGAGTTGAGAACATGAGGACAAAGCCCAGGGTATCGGTGAAACCCGG TGAGCTGAGCTCTGATCGCACCGAGTAAAGTCAGGCGGAGGTATGTTGTG GGCAGTGAGGGTCGATCCCCTCCGTCCTCTTGGGTCCGTCGGCTAAAACC CGCTGTTACTGAACTTTGTCTTTCTAGCCGCTAACGGTTCGATCGCCGAC ATTCCTAACTGGGTGCGCCGGACCAGTCTTCGGAGGTAACGGAGAGAGCT CGAAAGGAAATTATCCGGCTACACCGAAGAGCGGTACTTTACTATGCCGA TACCAATTGACTGCCACTTCCCGTCCTCGAGCCCGGTATTCACATCTTGA CCCGTTTACTTGAGCATTTGGGCGAACGAATGTCCTTATTTTATTTATAA CCCTTAAAGACGCTCGGTTTGGGTTAGTCCTCAATTCCCGAACCCCCGAT AAGGGAAATAGCAGGCGAGGCAAAGAAGTCTTATAGATAATGTTCTATGA AGAGCATATAAGAAAAGCAAATGTAATTAATCTTGGAGCGTCTTACTCGG GTGTTCTTTGTCAAATCGGTCGGGTTAGGTATCGGGGATAGAATCATAAT AAACCCAACTCCGGTTCCGCTAGGCGTCTCAAGGGTTAAATGCTGTAGTC GGTTTCGAAAACCAAGTCTATTTTCGCACCATGCATCCAGATCTCCTTGC TCTTACCCGCCCACCTACCACCTTCTCGACCAGGTGGGACGCTCCGTTCG GCAGAGGAAGGCCTGGGTGGCACATCGAGTGCTCAGCCATGACCCACTCG CTGTTTGGGCAACACTTGGACATCCACAGCGGTGGGATCGACCTCAAGTT CCCCCACCATACGAACGAGATCGCCCAATGCGAGGCATACTGCTTTGACG GGGAATCGGGGGCAGCACAAGGCGACAACGCATCCGCCCGCGTCGGTCTT GACGGGAGCGGCAGGCCTTGGGTGCAGCACTGGATCCACACGGGCCACCT GCACATCGAGGGTCGGAAGATGTCGAAGTCGCTCAAGAACTTCGTGACGG TCCGGGAGTATCTCGACGGGCATGCGGAGGGAAGGAGGGCCGCGGCCGAA GATTTCCGCATGTTCTGCTTGATGCACAAGTACAGCTCAAGGTATCGATG CCGGACGGGTATCTTGCCCCTTGTTTGCCACACGATCCTCCGGGGTGCTG GATGTCCTGCGCGTCTTGAACGCGGTGCACAAGATATATGACGATTGCTC AAGCTTAGGTAGGTTTCCTGATTTGTTGCGCTCCGGCGTGGCTCACGAAA GCCAGCTCGCTGAAGGTGAACATCCGGGCGGGTCCACTGGTGCCTCCCCC CCCCCCACTTGCCGCAGCGTAACCCTCAGCGAGGATCGAATGGAGGAGGC CAGGATAATTAGGGGTCGGATGGAACGATTCCTGGGAATGGCTGACACGG TTCTCCGTGGAGCTACAACCGACCAATCGGAATCCTCCCGACGTTGGGGG GATAAGGAGAAGTGGCTCCAGGAAGAAATATCCGCGTGTCGCAGGTGCGT TTTTACCCGAATGCAATCAAGTCTCTGTCACCGATACAGTACTTTCAATC GTAACATGATGGCTCTTTAATCTTTGGCTTGGATTTGCTCTGCAGCCGTT GAAAGATCCAATATATTGCCGTTGAAAGTGCTGTAGATGGGCGCATTCGT GGATTTATCAACTCGTCGAAAGGAGTACCGAGTGAATGTCTTTTCGGGCG GTCGAGGGCCTTAGTCACGACTTTCCAACCTATTGGGGCGAGTGTGACGT TGCCAGGGTGTCGTCCTCGAGAGCACCTAGTAAAGGGTGCTCCATTTTTC CCGCTTCCGCACCTTTTCGGTCTGTGCCAGAGGAGTGCATCTCGCCCTCA GCGAAGATTTCGATACGCCGAAGGTAGTTCGTCACCTCGCGACCTTGTGC GCGATCACCTCGACGCACATGAATTCCGAGACCATGGGCGACGCCGGACC TGTGCGCGCCGCAGCCAAGTGTGTTTCGGATACGCTAGGTATGTTGGGAG TTGGGAGCAGCAAGAGCAGTGCCTCCGCGAGTCACGGTGTGGGAGAACGT CTATGGGACGAAGGTTCGGAGCACGAGGGCGGGGGTGATAAGGGGGACGG GAGGCCTGCCTCCATCGCGAGAAGTTATCGCTGCGATTGTTGAGGTCAGG AGGGCCATGCGTCACCTCGTTCTCGCGCGGAACCTGAGCTCCCCGAACTG CATGCACGAGGCGAAACAGATGAAGAGGTGAGTGGTTGAGATTAGGCTGG GCCAATGAGAAAGCTGCGGCACGGGGTTTTGTATGAAATCCCGTTTGGGC GCTCGTGAGAGACGTGGGGAATTCTCGGCAATTTCACACGCGTGGGTTCA CGCATTAGCGACGTCTTCCTCGAGGGATGCTAGTGCGGCGCTGTTTGTTG GAATAAGCGAATCATCCGCTGAGCTACCAGTCAGCGTGTTTGCGTGCAAA GTACGGGATGTCTTCGCCGGAGACTGAGAAACCTTGTACACCTCCGACGA AGGTAACATTTGAAGGCTCGAAGGTCCTTTGATTCGCACATTGCACCCGA GTGACGAAGTTTTTGAATCGTTGATTCACGTCCTTCCCCTTTTGACACGT AGAAGATTTTCAAATCTTGAACAATATTTTACCTACTAAAGCGCGACAAA GTCCAGATGTCCTTGAAATGATACGCCTTCATCCTAGGTGTCCAGGACTT TCCCGGGCAAAATGAAGCGATTTCGGGAAGAGCTTGAGAGGTTTTCGGTC GGTTGACTACGCGTGGCTAGTGGTGCCTAACTCGATAGTGTTCACTTGAC AGGGATCTGCTAGGACTGGCTGACCGGACGCGAGACGAGACGTTACGCAA CATGGGCGTCCACGTAGACGATGGGCCAAACAACACCTGCACGTGGATGC TGCTGCCTCCCCAACGCCACCGAGGAGGATACGCCTCGCCCGCCGGGGAC ACGGGGCTTCTCGCCAAACCGAATCCAGTCTCCGGAGGCTCGAGGGTTGA CGCCGAGGGTGGGGGCGGCAGCAAAGGAGTGCCGCCGCCCTGGGTCAAGG GTTTGGAGAGACAAGAGAAAGATGACCGGGAGAAGCAGTAGCGGCGACGC AGGCTTTGCGAGGGTGGGGGGTGGCATGTCGCGTCGAAGATTTTGATGTC GCGTTGCAAGCGGTCTTGCTCGAGGCGATTCGTTGGCAATGTAGCTGATG ATCTTGTCCTGGACCCGAAAATCCGATACTGAGAGAATGCAAGGGGCGAA GTTTGCTCGACAGACAGGCGCACTGCGGGTACGCCGCATGCTTCCTCTTG CAGGTCAAGGCAAGCAGCCCGGATCTCCCTAAAATGAGCCAGGAGAATGC ACAGCCCAGGTATGGGGCAGTGGAGTGCATGACAAACTTGTTCCTGATCC CGTAGATTCAGTGGGTTTCTTCACCACGTGGGATGAATAGACCGGGTGAC TAGCGAGGGAGGTTCACGTACAGATAAGTCTGTGAAGCACTTTCGTGGGG ATCCCGAACGGTCCCATCCAGACTTCTGCGGTCTGGTTCACTCAGGTGAC ACCGCAAGTGGGGAGGAGTCTCAAGACGAGAGGCCGAACAGATCGTCCAT GGTATTGCTTGTACCCCACCAAAGAGCTGCCGATCGTTGACTTGGCGGAG ATGAAGAATACCCCTCCTTGTCTACTCTTAGTTGTACAGTACTTCGAATC GAAACACGGTTAATTTGTGATTGGTTACACATTGGTTCTAAGCCAATGGG TGAGAGTCATTTTGTTTCGGTTGGAGTGCTGTAAGACCCTACGCAGACCA CCCAGACCCGAATCCTGCACGTGAAGAGGCCATTAGCAACCGTAATTCAC AGTACCGTTCACCATCGCAGGTGTAAACTTGCAGAGTGAACGAGCTTTGG TCGCAATTTTTTGAGAGTGGGTTCCTATAAAGAGACTCCAAAGTGTACTC GCGACGACCGCCTCATGGTCGGCGCTTGAACGAAGCTCGAG
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig1002:191911..198351+

>mRNA_D-dichotoma_M_contig1002.116.1 ID=mRNA_D-dichotoma_M_contig1002.116.1|Name=mRNA_D-dichotoma_M_contig1002.116.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=3312bp|location=Sequence derived from alignment at D-dichotoma_M_contig1002:191911..198351+ (Dictyota dichotoma ODC1387m male)
ATGACCACGCTTGTACGCACGAGTCGAACTGCTTTGTCCAAGGCCACATG
GAGGCAGTCTCACCTTTCAGTAGCGACTGCTGCAGTTGGACGCAGAGCAT
TCAGCGCCGAAAAAGGAACAGACGATGCGACGCCAGCGCGACGTCTTTGG
TCGACACCGGGTATCCTCAACCCAAAAAGAGGACATCTGGATAACCTTTC
AGAGCCATCTTCTGGAAGCCTGAAGTGGTACTCATGCGGACCGACCGTGT
ATGACAGTGCGCATCTGGGACATGCTAGGACTTATGTGTCCTTGGATATC
ATACGACGCATCTTGGTGGACCATTTCCACTTCGACGTCACATACGCACT
TGGCGTCACAGACGTGGATGACAAGATAATCGCTCGGGCGCGCGAGCGAG
GGCTTACGCGTTGGCCGGAGATTGCTGTTATGGCCGGGGAGTTCGAGAAA
GAGTTCATGAAAGACATGGATGACTTGGGCGTACGTAGGCCCGATGCAGT
TGCCCGAGTCACGGAGCACCTTCCAGATATTATCGCGTACATCCAGCGCA
TCATTGAGATGACCACGCTTGTACGCACGAGTCGAACTGCTTTGTCCAAG
GCCACATGGAGGCAGTCTCACCTTTCAGTAGCGACTGCTGCAGTTGGACG
CAGAGCATTCAGCGCCGAAAAAGGAACAGACGATGCGACGCCAGCGCGAC
GTCTTTGGTCGACACCGGGTATCCTCAACCCAAAAAGAGGACATCTGGAT
AACCTTTCAGAGCCATCTTCTGGAAGCCTGAAGTGGTACTCATGCGGACC
GACCGTGTATGACAGTGCGCATCTGGGACATGCTAGGACTTATGTGTCCT
TGGATATCATACGACGCATCTTGGTGGACCATTTCCACTTCGACGTCACA
TACGCACTTGGCGTCACAGACGTGGATGACAAGATAATCGCTCGGGCGCG
CGAGCGAGGGCTTACGCGTTGGCCGGAGATTGCTGTTATGGCCGGGGAGT
TCGAGAAAGAGTTCATGAAAGACATGGATGACTTGGGCGTACGTAGGCCC
GATGCAGTTGCCCGAGTCACGGAGCACCTTCCAGATATTATCGCGTACAT
CCAGCGCATCATTGAGAACGGTATGGCCTACGAAGCTGAGGGGGGCATCT
ATTTCGATGTGGAGAAAATGGGAAGCGACTACGGAAAGCTTGGGATCGGG
GGCACGGACTCAACGACGCCTGTCGAGGGGCAAGAGGACGGAGAATCCGA
CGCACGAGGAAAGCGGAGCCACAAGGATTTCGCTCTCTGGAAGAAAGCCA
AACCTGACGAGCCATGAACGGTATGGCCTACGAAGCTGAGGGGGGCATCT
ATTTCGATGTGGAGAAAATGGGAAGCGACTACGGAAAGCTTGGGATCGGG
GGCACGGACTCAACGACGCCTGTCGAGGGGCAAGAGGACGGAGAATCCGA
CGCACGAGGAAAGCGGAGCCACAAGGATTTCGCTCTCTGGAAGAAAGCCA
AACCTGACGAGCCATGGTGGGACGCTCCGTTCGGCAGAGGAAGGCCTGGG
TGGCACATCGAGTGCTCAGCCATGACCCACTCGCTGTTTGGGCAACACTT
GGACATCCACAGCGGTGGGATCGACCTCAAGTTCCCCCACCATACGAACG
AGATCGCCCAATGCGAGGCATACTGCTTTGACGGGGAATCGGGGGCAGCA
CAAGGCGACAACGCATCCGCCCGCGTCGGTCTTGACGGGAGCGGCAGGCC
TTGGGTGCAGCACTGGATCCACACGGGCCACCTGCACATCGAGGGTCGGA
AGATGTCGAAGTCGCTCAAGAACTTCGTGACGGTCCGGGAGTATCTCGAC
GGGCATGCGGAGGGAAGGAGGGCCGCGGCCGAAGATTTCCGCATGTTCTG
CTTGATGCACAAGTACAGCTCAAGGTGGGACGCTCCGTTCGGCAGAGGAA
GGCCTGGGTGGCACATCGAGTGCTCAGCCATGACCCACTCGCTGTTTGGG
CAACACTTGGACATCCACAGCGGTGGGATCGACCTCAAGTTCCCCCACCA
TACGAACGAGATCGCCCAATGCGAGGCATACTGCTTTGACGGGGAATCGG
GGGCAGCACAAGGCGACAACGCATCCGCCCGCGTCGGTCTTGACGGGAGC
GGCAGGCCTTGGGTGCAGCACTGGATCCACACGGGCCACCTGCACATCGA
GGGTCGGAAGATGTCGAAGTCGCTCAAGAACTTCGTGACGGTCCGGGAGT
ATCTCGACGGGCATGCGGAGGGAAGGAGGGCCGCGGCCGAAGATTTCCGC
ATGTTCTGCTTGATGCACAAGTACAGCTCAAGCGTAACCCTCAGCGAGGA
TCGAATGGAGGAGGCCAGGATAATTAGGGGTCGGATGGAACGATTCCTGG
GAATGGCTGACACGGTTCTCCGTGGAGCTACAACCGACCAATCGGAATCC
TCCCGACGTTGGGGGGATAAGGAGAAGTGGCTCCAGGAAGAAATATCCGC
GTGTCGCAGCGTAACCCTCAGCGAGGATCGAATGGAGGAGGCCAGGATAA
TTAGGGGTCGGATGGAACGATTCCTGGGAATGGCTGACACGGTTCTCCGT
GGAGCTACAACCGACCAATCGGAATCCTCCCGACGTTGGGGGGATAAGGA
GAAGTGGCTCCAGGAAGAAATATCCGCGTGTCGCAGAGGAGTGCATCTCG
CCCTCAGCGAAGATTTCGATACGCCGAAGGTAGTTCGTCACCTCGCGACC
TTGTGCGCGATCACCTCGACGCACATGAATTCCGAGACCATGGGCGACGC
CGGACCTGTGCGCGCCGCAGCCAAGTGTGTTTCGGATACGCTAGGTATGT
TGGGAGTTGGGAGCAGCAAGAGCAGTGCCTCCGCGAGTCACGGTGTGGGA
GAACGTCTATGGGACGAAGGTTCGGAGCACGAGGGCGGGGGTGATAAGGG
GGACGGGAGGCCTGCCTCCATCGCGAGAAGTTATCGCTGCGATTGTTGAA
GGAGTGCATCTCGCCCTCAGCGAAGATTTCGATACGCCGAAGGTAGTTCG
TCACCTCGCGACCTTGTGCGCGATCACCTCGACGCACATGAATTCCGAGA
CCATGGGCGACGCCGGACCTGTGCGCGCCGCAGCCAAGTGTGTTTCGGAT
ACGCTAGGTATGTTGGGAGTTGGGAGCAGCAAGAGCAGTGCCTCCGCGAG
TCACGGTGTGGGAGAACGTCTATGGGACGAAGGTTCGGAGCACGAGGGCG
GGGGTGATAAGGGGGACGGGAGGCCTGCCTCCATCGCGAGAAGTTATCGC
TGCGATTGTTGA
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