mRNA_D-dichotoma_M_contig1002.113.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Match: D7G861_ECTSI (ADP-ribosylation factor GTPase-activating protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G861_ECTSI) HSP 1 Score: 651 bits (1679), Expect = 1.150e-206 Identity = 527/1251 (42.13%), Postives = 601/1251 (48.04%), Query Frame = 3 Query: 222 MDCGGPEISWGCPTYGILLCVACAGRHRSLGTHLSVIKSLTMDRWDASQVMRMELGGNGQLQDWFAKCQTQNSALEMKYRTKAATLYREHLRAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLARE---LEELKATQRRVKAKGSRRKRGPEKAGVIGGPVSAPKAAT----------------AEVFATVDTTGASEARRCGNEE-YEVVFGSGSMGFTLMKDGVSRALVTRLAPGGMAFRLGVRTGDYLVGVDGRRIYDYDQLMLLLPHSPRPLRLLFEGAGAALAAPPEKSPESQQPSTTVKSTGVPRVTAGSSTRLAAGSSSTKSSSRPVGPSDEVARSDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVRDGS-------GDGHPDSRRERRGEQQRGLDLEKDEKVGKDPIRSGRATESDGHGAAIEVVPPNPDTGMRSTSNDDKVAPNDVNGDVDPIVDEDDGTRRSRGVPEPRRKAAGAASSKHVNGNGFTPAEGQTRESRNRQARAEPSSASNRTEGVPGAGEASQLQAKGHERRQGERREVSEVNDRPGSTAATTEGETVVEDIQAQSAVGDGGEERSDQEEADVPSNVGVREGRGKAGIDGSVGNSLERPDEDATANSEMGGSVKMKTDAALGRDDKRPVAEERRRNKWRKGLLRRRHGDGSWTVRYSGGMEERHVPVSRLRPRETRETG----------------DAHPAAV----GERDRDGHNGRGPANDL-----PASDEQRHGRLGQKSSREMDGSGTVERTRESSASHAWVADYDSGGRYVKSRSSVDSCSSVSISCVRPGDFRPPGELRDDFF-DDEGSSDLD------VPTLSGLSRVDPTVPPGTTAPAYAPVSFASPGYPTMMPRRMEGFGGGGRGGDPAGSSSGGRPHGAGADAGGPPEL---IVKFPAGSMGLTLTKELGGGCSVTKVVPGGVAHANGVTLGQRVCAVNGQPSGTYEQTMAVIAGSPRPISITFVENLGFGGRGVAPGF----GGPDSIPSGQTWADVGMAATVGFMDAANAVAVEWGIGTKAPGVL-DEHDS-VGSVPQAPQGFRVQQKHNLMAIPTGVAGGYGKSLLRHRTYAVDVPDTIIAMSTKKTLAEEPGLESGEFDVQFGEGELGMRLEEGGSLKAFSVVSRITEDGQAMSLGVREGCTVVGVNGEEYLSHAHTVATLKHARRPISVRFRAP 3770 MDCG PE SWG PTYGILLCV CAGRHRSLGTHL+VIKSL MDRWDA QV RMELGGNGQLQ WF KCQT+NSALEMKYRTKAATLYRE+LR AA+ + LA+E +R E+AG + P AA A ATV + ARRCG EE YEVVFG G MGFTLMKD VSRALVTRLAPGGMAFRLGVRTGDYLVGVDGRR++DYDQLMLLLP +PRPLRLLFEGAGAALAA P +P T V G +T A + DS+XXXXXXXXXXX VRDG G P++ E Q +K+ V G+ +++ +GAA+ A GD+ + ++ +R E R A A N F+ S +A EGE E E+ + S K + LG K V ++++ +KWRKGLLRRRHGDGSWTVRYSGGMEER V V R+R R T H A GER R PA + W A + G + + ++ D R DFR PGELRDDFF D++GS V L+G R DP A PRRMEGFGGGGRG G + G G A P + V FPAG MGLTLTKE+ GGCSVTKVVPGGVA + GV LGQRVCAVNGQPSGTYE TMAVI GSPRPISITFV GG G F GGP + TWADVG+AAT+G MDAANAVAVEWG+G PGVL H S G +P APQGFRV QKH+LMAIPTGVAGG+G SL +HRT+AVDV + MSTKK L++ PG E GEFDV+FGEGELGMRLEE GS KA SVV +ITE GQA+SLGVREGC VVG+NGE+YLSHAHTVATLKHARRP+ VRFR P Sbjct: 1 MDCGAPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLAMDRWDAGQVRRMELGGNGQLQAWFTKCQTENSALEMKYRTKAATLYRENLRVAADEDLASGGGQAAGELQGAPGSRKGRIFAAAERAAA----SSLAQEEAXXXXXXXXXXXXXXXXXXXRREAERAGALSSAAQVPVAARHDPPSAHAGAGAAPGGATAAATVGSGMEEYARRCGREEEYEVVFGPGGMGFTLMKDAVSRALVTRLAPGGMAFRLGVRTGDYLVGVDGRRLHDYDQLMLLLPRTPRPLRLLFEGAGAALAASPPAAPGFASAPTAV----------GEATAAA----------------PDQRDGDSSXXXXXXXXXXXGG---------------------------------------VRDGEEPPCPVVGVALPEAVAEPSDRAQEDKPRQKEPAV---VSEEGQPSDNAVNGAAVAAA-----------------AVVVEEGDIGAVATVEEVAVEARAKQESRETHAAA--------NSFS------------------------------------------------------------SPSAAVEGE-----------------EAERTRESVAHNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSGGKAEQGLGEGSKVAVQDKKKSSKWRKGLLRRRHGDGSWTVRYSGGMEERRVAVDRMRLRVPERTSPPPXXXXXXXXXXXXXSTHVTAATGTSGERVEGRRRSRKAXXXXEEKISPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNGWEAAASAPGAWAAADTAQD----------RHEDFRAPGELRDDFFADNDGSGSSSRGDEEAVSALAGYGRQDPGA-----AXXXXXXXXXXXXXXXXAPRRMEGFGGGGRGWRGEGEVASGGGGSVGKAAQQPVKSRGHTVVFPAGGMGLTLTKEMSGGCSVTKVVPGGVADSRGVALGQRVCAVNGQPSGTYEHTMAVIGGSPRPISITFVMPSTGGGSGNGGRFSGVGGGPPVVQ--HTWADVGLAATIGAMDAANAVAVEWGLGANTPGVLAGAHSSGAGDIPPAPQGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAVDVSPDMATMSTKKALSDAPGEEVGEFDVRFGEGELGMRLEERGSFKASSVVVKITEGGQAVSLGVREGCKVVGINGEKYLSHAHTVATLKHARRPVVVRFRLP 1060
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Match: A0A7R9U3N9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3N9_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.230e-32 Identity = 105/317 (33.12%), Postives = 151/317 (47.63%), Query Frame = 3 Query: 192 VRSLDGNGVCMDCGGPEISWGCPTYGILLCVACAGRHRSLGTHLSVIKSLTMDRWDASQVMRMELGGNGQLQDWFAKCQTQNSALEMKYRTKAATLYREHLRAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLARELEELKATQRRVKAKGSRRKRGPEKAGVIGGPVSAPKAATAEVFATVDTTGASEARRCGNEEYEVVFGSGSMGFTLMKDGVSRALVTRLAPGGMAFRLGVRTGDYLVGVDGRRIYDYDQLMLLLPHSPRPLRLLF------EGAGAALAAPPEKSPESQQPSTTVKST 1124 V+ L GN C+DCG + SW + G L+C+ CAGRHRSLG H+S +++LTMD W A+Q RM LGGN L+ + Q + LE KY T A YRE LR AE GL + L+ +T+RR + S A +G AP+AA+ V A ++G R G ++ FG G MG L + RA V+ + P G A G+R GD++ GV+G+R+ DYD++M L+ RP+ + F +GAG+ K+ E++ +ST Sbjct: 2 VKRLKGNERCVDCGAADTSWASVSMGSLICLQCAGRHRSLGVHVSFVRNLTMDNWTAAQAKRMHLGGNALLRSFLTTHQLETLPLESKYTTPQAKFYRERLREEAERQVSQH---------------------------------GL-QALDVSPSTRRRFRTMES------AAAAALG---DAPEAASRSVTAPGGSSG-----RDGVQDVWCSFGEGRMGLRLTRAKNMRATVSMITPNGNADVQGLRVGDFVCGVNGKRVGDYDEVMELVQRLKRPVSITFRRITRCDGAGSGQDPEARKASEARDDQAVRRST 270
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Match: W7TXK3_9STRA (Adp-ribosylation factor gtpase-activating (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXK3_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.080e-31 Identity = 108/289 (37.37%), Postives = 141/289 (48.79%), Query Frame = 3 Query: 2922 ELIVKFPAGSMGLTLTKELGGGCSVTKVVPGGVAHANGVTLGQRVCAVNGQPSGTYEQTMAVIAGSPRPISITFVENLGFGGRGVAPGFGGPDSIPSGQTWADVGMAATVGFMDAANAVAVEWGIGTKAPGVLDEHDSVGSVPQAPQGFRVQQKHNLMAIPTGVAGGYGKSLLRHRTYAVDVPDTIIAMSTKKTLAEEPGLESGEFDVQFGEGELGMRLEE------GGSLKAFSVVSRITEDGQAMSLGVREGCTVVGVNGEEYLSHAHTVATLKHARRPISVRFRAP 3770 E V F G MGLTL+K GG VT V P G A GV +G + +++ Q Y+ MA + PRP+ + F + G G G G P G W G + + + A G G K+ VL H S+G A+P+ +A S +Y + ++TK L E+P ++GEFD F EG LGMRLEE G LK V ++T G A S GVR+GC VVGVNGE ++SHAHTVATLKH +RP+ VRFR P Sbjct: 174 EYSVVFGEGPMGLTLSKVEGGRALVTSVAPAGQAVLGGVRVGDALVSLDHQAMALYDLVMARLPSLPRPLVVGFRRRME--GMGSTEGAVGGPRAP-GPRWLGSGAS-----LSGSGGKAFAGGFG-KSLQVLTRHASLGP--------------GAAAVPS-LASASSSSFTSGGSYPLGGGS---GLTTKVPLTEDP--DAGEFDACFAEGPLGMRLEEMPLTSREGGLKYVCQVLQVTSGGAAESKGVRDGCCVVGVNGERFISHAHTVATLKHGKRPVLVRFRLP 433
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Match: A0A4D9D4X6_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4X6_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.920e-30 Identity = 111/294 (37.76%), Postives = 141/294 (47.96%), Query Frame = 3 Query: 2922 ELIVKFPAGSMGLTLTKELGGGCSVTKVVPGGVAHANGVTLGQRVCAVNGQPSGTYEQTMAVIAGSPRPISITF---VENLGFGGRGVA-PGFGGPDSIPSGQTWADVGMAATVGFMDAANAVAVEWGIGTKAPGVLDEHDSVG-SVPQAPQGFRVQQKHNLMAIPTGVAGGYGKSLLRHRTYAVDVPDTIIAMSTKKTLAEEPGLESGEFDVQFGEGELGMRLEE------GGSLKAFSVVSRITEDGQAMSLGVREGCTVVGVNGEEYLSHAHTVATLKHARRPISVRFRAP 3770 E V F G MGLTL+K GG VT V P G A GV +G + +++ Q Y+ MA + PRP+ + F +E +G R V P GP + SG + + G A G G G K+ VL H S+G AP + GG G ++TK L ++PG +GEFD F EG LGMRLEE G LK V ++T G A S GVR+GC VVGVNGE ++SHAHTVATLKH +RP+ VRFR P Sbjct: 750 EYSVVFGEGPMGLTLSKVEGGRALVTSVAPAGQAVLGGVRVGDALVSLDHQAMALYDLVMARLPSLPRPLVVGFRRRMEGMGSTERAVGGPRAPGPRWLGSGASSSGSGGKAFAG------------GFG-KSLQVLTRHASLGPGTAAAPSLXXXXXXXXXXXXXXPLGGGSG-------------------LTTKVPLTQDPG--TGEFDAWFAEGPLGMRLEEMPLTSREGGLKYVCQVLQVTSGGAAESKGVRDGCCVVGVNGERFISHAHTVATLKHGKRPVLVRFRLP 1009
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Match: A0A7S2XZL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL0_9STRA) HSP 1 Score: 112 bits (281), Expect = 6.980e-25 Identity = 70/146 (47.95%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 3372 VQQKHNLMAIPTGVAGGYGKSLLRHRTYAVDVPDTI-------------IAMSTKKTLAEEPGLESGEFDVQFGEGELGMRLEE--GGSLKAFSVVSRITEDGQAMSLGVREGCTVVGVNGEEYLSHAHTVATLKHARRPISVRFR 3764 V+ MA P VAGG+GK+L PD++ M+TKK L GLE GE DV FG G LG+RLEE GG SVV+ +TE GQA GV G T++G+NGE++LSHAHTV+TLKH +RPISVR R Sbjct: 15 VKAARERMAAPPAVAGGFGKTLNVDSGDNEANPDSMENAEGSSGGAASMTGMTTKKELGS--GLEDGEVDVTFGPGPLGLRLEERPGGGGAMISVVTSVTEAGQADKQGVEVGSTIIGLNGEQFLSHAHTVSTLKHGKRPISVRLR 158
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Match: A0A8J2SXS4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXS4_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.550e-24 Identity = 93/308 (30.19%), Postives = 136/308 (44.16%), Query Frame = 3 Query: 165 PFPKESMRRVRSLDGNGVCMDCGGPEISWGCPTYGILLCVACAGRHRSLGTHLSVIKSLTMDRWDASQVMRMELGGNGQLQDWFAKCQTQNSALEMKYRTKAATLYREHLRAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLARELEELKATQRRVKAKGSRRKRGPEKAGVIGGPVSAPK-----AATAEVFATVDTTGASEARRCGNEEY-EVVFGSGSMGFTLMKDGVSRALVTRLAPGGMAFRLGVRTGDYLVGVDGRRIYDYDQLMLLLPHSPRPLRLLFEGAGAALAA 1070 P P ++ ++R + GN +C+DC E W +G L C+ CAGRHR LG +SV +SLTMD W + ++ M LGGN QL+ +F +NS +E+ YRTK A+ YRE L+A ++ ++ +R+ K+ P + P PK A +V + GAS R + G+GSM ALVT++ G A GVR GDY+V ++GR DYD+++ L +PRPLRL G +A Sbjct: 18 PLPPNAIEKIRCVPGNDLCLDCRAAEPDWADVQHGSLHCIQCAGRHRGLGVKVSVTRSLTMDNWTEANLLAMLLGGNKQLRTFFETHTIENSDIEVLYRTKQASYYREQLQA----------------------------------------------QVAKMALQRRKSKS--------PPPISMPATPEPPPKPDDGFARDFDVALRTPSLGASLTRALPPPGVTSPIQGNGSM-----------ALVTKVVTNGPAHSAGVRVGDYVVALNGRPATDYDEVVALFARAPRPLRLTVRRFGGDASA 260
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Match: A0A7S3H6K0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6K0_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.050e-23 Identity = 82/277 (29.60%), Postives = 126/277 (45.49%), Query Frame = 3 Query: 219 CMDCGGPEISWGCPTYGILLCVACAGRHRSLGTHLSVIKSLTMDRWDASQVMRMELGGNGQLQDWFAKCQTQNSALEMKYRTKAATLYREHLRAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLARELEELKATQRRVKAKGSRRKRGPEKAGVIGGPVSAPKAATAEVF--ATVDTTGASEARRCGNEEYEVVFGSGSMGFTLMKDGVSRALVTRLAPGGMAFRLGVRTGDYLVGVDGRRIYDYDQLMLLLPHSPRPLRLLF 1043 C DC + W ++G L+C+ CAG+HRSLG +S ++S++MD W QV M GGN Q++ +F K + +NS ++ Y +K A YRE L+ E+K+ R + R + ++A A++ A T + R+ E+Y V FG G MG T+ KD RALV+RL GG A + GV GD++ GV +R+ DYD++M ++P RP+ + F Sbjct: 3 CCDCSSRDTDWCSISHGTLICLECAGKHRSLGVLVSFVRSISMDSWSLQQVEMMRQGGNEQIKRFFRKLEIENSPIKTLYTSKGANHYRERLKEKVGKIMSG-----------------------------------------EIKSESRIIPHASRHRN-------------TRSQSAIADLIHGAKTPQTLNGDKRKSSFEQYHVSFGDGPMGMTISKDFGGRALVSRLVSGGPAEKNGVTVGDHITGVAKKRLDDYDEIMHMIPCLTRPIDIQF 225
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Match: A0A835ZEM7_9STRA (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM7_9STRA) HSP 1 Score: 100 bits (250), Expect = 7.890e-22 Identity = 44/69 (63.77%), Postives = 56/69 (81.16%), Query Frame = 3 Query: 288 CAGRHRSLGTHLSVIKSLTMDRWDASQVMRMELGGNGQLQDWFAKCQTQNSALEMKYRTKAATLYREHL 494 CAGRHRSLG+H+S I+SLT+DRW+ + ++LGGN QL W +C+ QNSA+E+KYRTKAATLYRE L Sbjct: 3 CAGRHRSLGSHVSTIRSLTLDRWEERHIASLKLGGNAQLHSWLTRCKVQNSAIEVKYRTKAATLYREKL 71
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Match: A0A1Z5JDN2_FISSO (ADP-ribosylation factor GTPase-activating protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDN2_FISSO) HSP 1 Score: 102 bits (255), Expect = 4.500e-21 Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 3 Query: 177 ESMRRVRSLDGNGVCMDCGGPEISWGCPTYGILLCVACAGRHRSLGTHLSVIKSLTMDRWDASQVMRMELGGNGQLQDWFAKCQ--TQNSALEMKYRTKAATLYREHLRAAAE 509 E +++L GN VC+DCG + WG P GIL C C+GRHR LGTHLS ++S+ MDRW Q+ M+ GGN Q+ D+ + Q T+ + + KY A LYR+ L A E Sbjct: 10 EDFAYLQTLPGNDVCVDCGNHKPDWGSPKLGILFCFDCSGRHRGLGTHLSFVRSVAMDRWSEKQIKLMKAGGNKQINDFLEEYQIKTKKTTAKEKYDNPVAELYRQKLDARVE 122
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Match: A0A196SB56_BLAHN (ARF-GAP protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SB56_BLAHN) HSP 1 Score: 105 bits (261), Expect = 8.780e-21 Identity = 48/115 (41.74%), Postives = 67/115 (58.26%), Query Frame = 3 Query: 168 FPKESMRRVRSLDGNGVCMDCGGPEISWGCPTYGILLCVACAGRHRSLGTHLSVIKSLTMDRWDASQVMRMELGGNGQLQDWFAKCQT-QNSALEMKYRTKAATLYREHLRAAAE 509 P E +R L GN VC DCG W TYG +C+ C+G+HR LG H+S ++S MD W ++ M +GGN L D+FAK +N+ ++ KY + AA LYRE ++A E Sbjct: 4 MPIEVYNELRQLPGNNVCADCGAARPQWASVTYGTFICLECSGKHRGLGVHISFVRSAQMDSWSEKEIQAMRVGGNQNLNDFFAKYNIPKNATIKQKYNSPAAELYREIIKAKVE 118 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1002.113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1002.113.1 >prot_D-dichotoma_M_contig1002.113.1 ID=prot_D-dichotoma_M_contig1002.113.1|Name=mRNA_D-dichotoma_M_contig1002.113.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=1215bp MWEPGPFPKESMRRVRSLDGNGVCMDCGGPEISWGCPTYGILLCVACAGRback to top mRNA from alignment at D-dichotoma_M_contig1002:71301..95568+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1002.113.1 ID=mRNA_D-dichotoma_M_contig1002.113.1|Name=mRNA_D-dichotoma_M_contig1002.113.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=24268bp|location=Sequence derived from alignment at D-dichotoma_M_contig1002:71301..95568+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1002:71301..95568+ >mRNA_D-dichotoma_M_contig1002.113.1 ID=mRNA_D-dichotoma_M_contig1002.113.1|Name=mRNA_D-dichotoma_M_contig1002.113.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=7290bp|location=Sequence derived from alignment at D-dichotoma_M_contig1002:71301..95568+ (Dictyota dichotoma ODC1387m male)back to top |