mRNA_D-dichotoma_M_contig100.99.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig100.99.1 vs. uniprot
Match: A0A6H5KZH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH1_9PHAE) HSP 1 Score: 266 bits (681), Expect = 1.040e-72 Identity = 132/213 (61.97%), Postives = 161/213 (75.59%), Query Frame = 2 Query: 3698 ADKERPDKKAKVSPLIALRAGHGVAVEHLNMLVDLVEEMTARWERQLEEIGEACMGEDMLGEEGTVSAGAVRSPKLVGPALPLGVVDWPGIASSLWRRHAVAWSPQLCQGLWKFVAYGDVNAAMNALPRVGETLDGAWNRQDLLYESDTEDLAIDPSALKKDVTNLKKSKWGRSRTSPARIKQRKESDAERSYVPLRRGPQLMSGSIELRQEP 4336 ADK + L+AL+AGHGVAV+HLNMLV LVEEMT +WERQL++ GE + ML EGT + A+RS L GP LP+GV+DWPG+ASSLWRRH+VAWSPQLCQGLWKFVAYGDV AAMNALPR GETL+GAW RQDLLY+SDTE L+++P + K+ T K +WGRSR++PA ++ ++ RS PLRR P LMSGSI+LR P Sbjct: 285 ADKTHEGQAGNKQELVALKAGHGVAVDHLNMLVSLVEEMTHKWERQLDDGGEGGWDDGMLAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISKEDTTSKIPRWGRSRSNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSP 497
BLAST of mRNA_D-dichotoma_M_contig100.99.1 vs. uniprot
Match: A0A6H5KXM9_9PHAE (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXM9_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 1.500e-6 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = -3 Query: 396 KMAGMGVAGGGDTRISANNALKDWLAANGVWVSESSGWGTGPHPLSVAV 542 KM+G+G D+R++ NNALK+W+ NGVWV + S WG GPH LSVAV Sbjct: 163 KMSGLGGVVAEDSRVAENNALKEWMGENGVWVYDKSDWGVGPHALSVAV 211 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig100.99.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig100.99.1 >prot_D-dichotoma_M_contig100.99.1 ID=prot_D-dichotoma_M_contig100.99.1|Name=mRNA_D-dichotoma_M_contig100.99.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=1498bp MSLRELLGMSEGTNETPILGPMVGSNVPVQRPQQQLQSLPGPQRKRSRGDback to top mRNA from alignment at D-dichotoma_M_contig100:552980..570407+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig100.99.1 ID=mRNA_D-dichotoma_M_contig100.99.1|Name=mRNA_D-dichotoma_M_contig100.99.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=17428bp|location=Sequence derived from alignment at D-dichotoma_M_contig100:552980..570407+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig100:552980..570407+ >mRNA_D-dichotoma_M_contig100.99.1 ID=mRNA_D-dichotoma_M_contig100.99.1|Name=mRNA_D-dichotoma_M_contig100.99.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=8988bp|location=Sequence derived from alignment at D-dichotoma_M_contig100:552980..570407+ (Dictyota dichotoma ODC1387m male)back to top |