mRNA_D-dichotoma_M_contig100.91.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Match: D7FV72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV72_ECTSI) HSP 1 Score: 155 bits (392), Expect = 7.140e-37 Identity = 90/168 (53.57%), Postives = 106/168 (63.10%), Query Frame = 3 Query: 1557 DLPPLYQWLSFLLPIVVHMMIGNFVEPSLFGESFELSPVVVLLGLGFWGSMWGIPGMILAVPIMVIVRIVCTNLDHPYAKMLLRLLAGNVFEPREDDLHGMVPN-----AGAPGAFGVLCDPYEGEGREEPSAVGLEAGTSGRSMVAGGHSSTKTSV------RQYGT 2027 D+ L Q L+F+LP H++IGN VEP LFGESFELSPVVVLL L FWGS+WGIPGMILAVP++VI RIVC +LDHPYAK L+RLL GNVFE REDD ++PN G G+ P G E + V L A G + SS K V R+YGT Sbjct: 259 DMSHLNQVLAFVLPTTAHLVIGNLVEPGLFGESFELSPVVVLLSLAFWGSLWGIPGMILAVPMVVITRIVCDHLDHPYAKTLMRLLEGNVFEAREDDT--LIPNWNNGAGGGANGGGISSSPASVFGGSERADVALAAAEIGAGRRSRRSSSEKAPVNTEDDHRRYGT 424
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Match: A0A835Z5M1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M1_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.490e-24 Identity = 57/116 (49.14%), Postives = 78/116 (67.24%), Query Frame = 3 Query: 1530 PCLAVCLPS-------DLPPLYQWLSFLLPIVVHMMIGNFVEPSLFGESFELSPVVVLLGLGFWGSMWGIPGMILAVPIMVIVRIVCTNLDHPYAKMLLRLLAGNVFEPREDDLHG 1856 P +A CLP DL + + L+F LP ++H+M+GN VEP +FGE F LSPVVVLL + FW +WG+PG IL+VP++V VRI C +L+HPYA+ + L+ G +FE D L G Sbjct: 295 PMVATCLPMPLVLLDPDLSAVNKVLAFALPTLIHLMVGNVVEPKIFGEHFSLSPVVVLLNITFWSLLWGLPGAILSVPLLVCVRITCLHLEHPYARTAVALMEGRIFEAHLDALAG 410
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Match: A0A7R9YDP2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDP2_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.380e-23 Identity = 46/90 (51.11%), Postives = 70/90 (77.78%), Query Frame = 3 Query: 1575 QWLSFLLPIVVHMMIGNFVEPSLFGESFELSPVVVLLGLGFWGSMWGIPGMILAVPIMVIVRIVCTNLDHPYAKMLLRLLAGNVFEPRED 1844 ++ +F+LP VHM+IGN +EP LFG FE+ P++VL+ L FWG +WGIPGM+L+VP+M + RI+C +LDHPYAK+ +R++ F+ R++ Sbjct: 337 KFCAFVLPATVHMIIGNIMEPRLFGREFEMHPIMVLIALAFWGVLWGIPGMVLSVPLMAVTRIICEDLDHPYAKIAVRIMECRAFDDRDE 426
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Match: A0A7S2V037_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V037_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.240e-22 Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 3 Query: 1530 PCLAVCLPSDL---PPLYQWLS----FLLPIVVHMMIGNFVEPSLFGESFELSPVVVLLGLGFWGSMWGIPGMILAVPIMVIVRIVCTNLDHPYAKMLLRLLAGN------VFEPREDDLH 1853 P +A LP L P WL+ F LP VVHM++GNF+EP + GESF ++P+VVLL + FW +WGIPGMI++VP++ I+RI C + DHPYAK+ + L+ N V DLH Sbjct: 58 PLIATMLPMPLVLFDPDKTWLAVGLAFFLPSVVHMVMGNFIEPYVMGESFTIAPIVVLLAISFWSVLWGIPGMIMSVPLVSILRICCVHSDHPYAKVAVSLMEANFVKAYQVVAEESQDLH 178
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Match: W7TK24_9STRA (Membrane protein-a permease n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK24_9STRA) HSP 1 Score: 101 bits (251), Expect = 6.400e-20 Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 1530 PCLAVCLPSDLPPLYQWLSFLLPIVVHMMIGNFVEPSLFGESFELSPVVVLLGLGFWGSMWGIPGMILAVPIMVIVRIVCTNLDHPYAKMLLRLLAGNVFEPREDDLHG-MVPNAGAPGAFG 1892 P V DL + L+ +LP + H +G ++EP LFGE E+ P+++LL L FW +WG+ GMIL+VP++ +RIVC NL+HPYA++ R++ G +F+ D +G P AG+ G G Sbjct: 66 PLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDAGLDGRNGGKPPCAGSEGPRG 187
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Match: I2CPB0_NANGC (Membrane protein-a permease n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPB0_NANGC) HSP 1 Score: 101 bits (252), Expect = 2.110e-19 Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 1530 PCLAVCLPSDLPPLYQWLSFLLPIVVHMMIGNFVEPSLFGESFELSPVVVLLGLGFWGSMWGIPGMILAVPIMVIVRIVCTNLDHPYAKMLLRLLAGNVFEPREDDLHG-MVPNAGAPGAFGVLCDPYEGEGREEPSAV 1943 P V DL + L+ +LP + H +G ++EP LFGE E+ P+++LL L FW +WG+ GMIL+VP++ +RIVC NL+HPYA++ R++ G +F+ D +G P AG+ G G + E +P V Sbjct: 178 PLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDAGLDGRNGGKPPCAGSEGPRGYYQNRTAEETPIQPVGV 316
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Match: A0A7S3PMN6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMN6_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.110e-19 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 1581 LSFLLPIVVHMMIGNFVEPSLFGESFELSPVVVLLGLGFWGSMWGIPGMILAVPIMVIVRIVCTNLDHPYAKMLLRLLAGNV 1826 L+ LPI VH ++GNF+EP +FG++ EL VVVLL L FW ++WGIPG ILAVPIM ++RIV +N+ HPYA ++LRLL G + Sbjct: 588 LAIALPIGVHTIVGNFIEPKVFGDTMELHAVVVLLSLSFWYTVWGIPGAILAVPIMAVIRIVVSNIKHPYALVILRLLEGKL 669
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Match: A0A7S1CFD1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFD1_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 8.670e-19 Identity = 48/104 (46.15%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 1581 LSFLLPIVVHMMIGNFVEPSLFGESFELSPVVVLLGLGFWGSMWGIPGMILAVPIMVIVRIVCTNLDHPYAKMLLRLLAGNVFEPREDDLHGMVPNAGAPGAFG 1892 L+F+LP +VH +IGN+VEP +FG S EL PVVV++ LGFW ++WG+ G IL++P++ +RIV T++ HPY+ ++RLL G + P D+ A A G +G Sbjct: 225 LAFVLPTLVHALIGNWVEPKIFGHSLELHPVVVIVSLGFWYALWGVTGAILSIPLVASLRIVLTHIRHPYSVAVIRLLEGQLSLP---DVGDEPVGAAASGGYG 325
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Match: A0A7S4DFQ9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFQ9_HETAK) HSP 1 Score: 95.5 bits (236), Expect = 3.510e-17 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = 3 Query: 1530 PCLAVCLPSDLPPLYQWLSFLLPIVVHMMIGNFVEPSLFGESFELSPVVVLLGLGFWGSMWGIPGMILAVPIMVIVRIVCTNLDHPYAKMLLRLLAGNVFE 1832 PC L L + L F LP +HM +GNFVEP + GE +L PV VLL + FW +WG+PGM++AVP++ ++RIVC +L+HPY+ +++ + G E Sbjct: 195 PCGLALLDPTLGTAPKVLVFALPTALHMAVGNFVEPLVMGEHLDLHPVCVLLAMAFWLILWGVPGMLMAVPLVSMLRIVCLHLEHPYSNVMVLVFEGRFLE 295
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Match: A0A7S0NZF0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NZF0_9EUKA) HSP 1 Score: 96.7 bits (239), Expect = 5.010e-17 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 3 Query: 1581 LSFLLPIVVHMMIGNFVEPSLFGESFELSPVVVLLGLGFWGSMWGIPGMILAVPIMVIVRIVCTNLDHPYAKMLLRLLAGNVFEPREDDLHGM 1859 L+ LP+ VH ++GNF+EP LFG S EL PVVVLL L WG++WG+PG++LAVP+ ++RI ++DHP + +L G P D + G+ Sbjct: 345 LAITLPLSVHAVVGNFLEPILFGHSLELHPVVVLLSLMLWGTLWGVPGLVLAVPVTAVMRIHLAHIDHPLPRYFASVLVGKRRTPSVDAIEGL 437 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig100.91.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig100.91.1 >prot_D-dichotoma_M_contig100.91.1 ID=prot_D-dichotoma_M_contig100.91.1|Name=mRNA_D-dichotoma_M_contig100.91.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=188bp MYVSMNPSRRVSTSTLRDPPPCLAVCLPSDLPPLYQWLSFLLPIVVHMMIback to top mRNA from alignment at D-dichotoma_M_contig100:339065..345043- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig100.91.1 ID=mRNA_D-dichotoma_M_contig100.91.1|Name=mRNA_D-dichotoma_M_contig100.91.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=5979bp|location=Sequence derived from alignment at D-dichotoma_M_contig100:339065..345043- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig100:339065..345043- >mRNA_D-dichotoma_M_contig100.91.1 ID=mRNA_D-dichotoma_M_contig100.91.1|Name=mRNA_D-dichotoma_M_contig100.91.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1128bp|location=Sequence derived from alignment at D-dichotoma_M_contig100:339065..345043- (Dictyota dichotoma ODC1387m male)back to top |