mRNA_D-dichotoma_M_contig100.88.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Match: D7FV70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV70_ECTSI) HSP 1 Score: 272 bits (696), Expect = 1.440e-85 Identity = 147/226 (65.04%), Postives = 169/226 (74.78%), Query Frame = 2 Query: 233 MPKGGRLVFKGGEAAVSSKGKKKEKIKRKREKALVLAGIGGDVVPSDGTGATSAVDTTDGGAAGIEQE-ELRPISGTGRITSSSTAVHGHGTKFMDELHAGDAIIITHPTTLREETKIVKMVLSNMSLGISSPFGSDLITTTKFRYIKAPRVEKSADARADETKRRKIQETDSATGTYAGSGGHRLVYRERTAQGNYRIIEETVDEAMSREQLLDLRAKKKADRHC 907 MPKGGRLVFKGGE AVSS+GKKK+K+ S G A E+RP+SGTGRITSS TAVHGH KFMDELH+GDAI+ITHPTTLREET+I+KMVLSNMS+ ISSPF SDLI+TT FRYIKAPR+E SA+ +A+E K+RK+QE DSA GTYAG+GG RLVYRERT GNYRIIE TVDEAM+RE++LD+RA KKADRHC Sbjct: 1 MPKGGRLVFKGGEVAVSSRGKKKDKLXXXXXXXXXXXXX-----XSTGEAAXXXXXXXXXXXXXXXXXXEMRPVSGTGRITSSGTAVHGHEAKFMDELHSGDAILITHPTTLREETRIIKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEERKKRKVQEEDSAFGTYAGAGGKRLVYRERTPAGNYRIIETTVDEAMTREEMLDMRATKKADRHC 221
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Match: A0A835Z5I8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I8_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.060e-46 Identity = 86/159 (54.09%), Postives = 119/159 (74.84%), Query Frame = 2 Query: 437 ELRPISGTGRITSSSTAVHGHGTKFMDELHAGDAIIITHPTTLREETKIVKMVLSNMSLGISSPFGSDLITTTKFRYIKAPRVEKSADARADETKRRKIQETDSATGTYAGSGGHRLVYRERTA--QGNYRIIEETVDEAMSREQLLDLRAKKKADRHC 907 ELRP++GTGRI+SS T V GHGT+FM EL AGDA+I+THPT+L +ET++V+MVLS+ G+SS F +DLI+TT F+Y+ APR E A+ A KR ++QE D A GTY+ GG ++VYR + A G Y I+ ++M+RE+LL++R+KKKADR+C Sbjct: 33 ELRPVAGTGRISSSGTVVTGHGTRFMSELRAGDALIVTHPTSLAQETRLVRMVLSDAHAGVSSAFSTDLISTTAFQYVSAPRGE--AEDPAVAAKRARLQEEDRAFGTYSSGGGSKVVYRVKKAGVYGGYEIVTADSKKSMTREELLNVRSKKKADRYC 189
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Match: A0A024UEL5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UEL5_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.760e-40 Identity = 88/162 (54.32%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 437 ELRPISGTGRITSSSTAVHGH-GTKFMDELHAGDAIIITHPTTLREETKIVKMVLSNMSLGISSPFGSDLITTTKFRYIKAPRVEKSADARADETKRRKIQETDSATGTYAG--SGGHRLVYRERTA--QGNYRIIEETVDEAMSREQLLDLRAKKKADRHC 907 +L + GTGRI +S T V G GTKF EL GDA+II HPT+L+EET+IVKMVLS++S+ ISSPF SDL++TT F YIKAP E DA + + +K E SA GTYAG + G YR + A G Y II+ET D SRE+LLD+R+K+K DRHC Sbjct: 49 QLIKLQGTGRILTSGTTVMGKMGTKFFHELSIGDALIINHPTSLKEETRIVKMVLSDVSVSISSPFSSDLVSTTTFWYIKAPPEEVDKDAVESKKRSKKNDEEASAFGTYAGGTTAGTEFTYRVKKAGVYGGYAIIKETADANRSREELLDIRSKRKGDRHC 210
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Match: A0A1V9YA44_9STRA (Niemann-Pick C1 protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YA44_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.330e-39 Identity = 107/233 (45.92%), Postives = 133/233 (57.08%), Query Frame = 2 Query: 224 GVPMPKGGRLVFKGGEAAVSSKGKKKEKIKRKREKALVLAGIGGDVVPSDGTGATSAVDTTDGGAAGIEQEELRPISGTGRITSSSTAVHGH-GTKFMDELHAGDAIIITHPTTLREETKIVKMVLSNMSLGISSPFGSDLITTTKFRYIKAPRVEKSADARADETKRRKIQETDSATGTYAG--SGGHRLVYRERTA--QGNYRIIEETVDEAMSREQLLDLRAKKKADRHC 907 G GG+L KG A + K KKK RK E A PSD SA D E EL + GTGRI +S T V G GT+F EL GDA+II HPT+L+EET+IV+MVLS++S+ ISS F SDL++TT F YIKAP + TK++K E A GTYAG + G +L YR + + G Y II+ET D + SRE+LLDLR+K K DRHC Sbjct: 3 GYTKAVGGKLQLKGSLALATKKPKKKX---RKAEAA-----------PSD---EASAPDHH-------EDFELVKVQGTGRILTSGTTVMGKMGTRFASELSVGDAMIIVHPTSLQEETRIVRMVLSDVSISISSAFSSDLVSTTTFHYIKAPPDXXXXAQKELATKKQKKDEEGFAFGTYAGGTTAGSQLTYRVKKSGVYGGYTIIKETADTSRSREELLDLRSKMKGDRHC 211
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Match: W4H648_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H648_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.750e-39 Identity = 85/162 (52.47%), Postives = 109/162 (67.28%), Query Frame = 2 Query: 437 ELRPISGTGRITSSSTAVHGH-GTKFMDELHAGDAIIITHPTTLREETKIVKMVLSNMSLGISSPFGSDLITTTKFRYIKAPRVEKSADARADETKRRKIQETDSATGTYAG--SGGHRLVYRERTA--QGNYRIIEETVDEAMSREQLLDLRAKKKADRHC 907 +L + GTGRI +S T V G GTKF EL GDA+II HPT+++EET+IVKMVLS++S+ ISSPF SDL++TT F YIKAP E DA + + +K +E A GTYAG S G YR + A G Y +++ET D SRE LLD+R+K+K DRHC Sbjct: 48 QLVKLQGTGRILTSGTTVMGKMGTKFYHELSIGDALIIMHPTSMKEETRIVKMVLSDVSISISSPFSSDLVSTTTFSYIKAPPEEIDQDAIETKKRSKKNEEETFAFGTYAGGTSAGSEFTYRVKKAGAYGGYAVLKETADANRSREDLLDIRSKRKGDRHC 209
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Match: A0A7S2S051_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S051_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.330e-39 Identity = 86/166 (51.81%), Postives = 115/166 (69.28%), Query Frame = 2 Query: 422 GIEQEELRPISGTGRITSSSTAVHGH-GTKFMDELHAGDAIIITHPTTLREETKIVKMVLSNMSLGISSPFGSDLITTTKFRYIKAPRVEKSADARADETKRRKIQETDSATGTYAGSGGHRLVYRERTAQ--GNYRI-IEETVDEAMSREQLLDLRAKKKADRHC 907 G E L ++G GRI++S T VHGH GT+FM +L GDA+IITHPTT+ +ET+IVKMVLS++S+ ISSPF SDLI+T +FR++KAP E +A ++ K++ + A GTYAG G + VYRE+ A G Y I +E+T D SR LL++RA KKADR C Sbjct: 56 GQEPAPLVIVAGKGRISTSGTTVHGHEGTQFMKQLKHGDAVIITHPTTMMDETRIVKMVLSDVSMSISSPFSSDLISTVEFRFVKAPEEEVDYEAIENQKKQKLLDTEKEAFGTYAGDLGTKFVYREKKAGAFGGYAIRVEDTADR--SRTDLLEMRAGKKADRFC 219
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Match: A0A6G0XV17_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV17_9STRA) HSP 1 Score: 150 bits (379), Expect = 6.970e-39 Identity = 86/165 (52.12%), Postives = 109/165 (66.06%), Query Frame = 2 Query: 428 EQEELRPISGTGRITSSSTAVHGH-GTKFMDELHAGDAIIITHPTTLREETKIVKMVLSNMSLGISSPFGSDLITTTKFRYIKAPRVEKSADARADETKRRKIQETDSATGTYAGSG--GHRLVYRERT--AQGNYRIIEETVDEAMSREQLLDLRAKKKADRHC 907 E+ +L + G+GRI +S T V G GT+F EL GDA+II HPT+L+EET+IV MVLS++S+ ISSPF SDLI+TT F YIKAP E D + +R+ QE A GTYAG G YR + A G Y I++ET D SRE+LLD+R+KKK DRHC Sbjct: 47 EEFQLVKLQGSGRILTSGTTVMGKMGTRFSHELSIGDALIILHPTSLKEETRIVTMVLSDVSISISSPFSSDLISTTTFSYIKAPPEEVDKDELETKKRRKNEQEESFAFGTYAGGTTVGTEYTYRVKKSGAYGGYAIVKETADSNRSREELLDIRSKKKGDRHC 211
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Match: A0A485LKB6_9STRA (Aste57867_21986 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKB6_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.390e-38 Identity = 87/170 (51.18%), Postives = 113/170 (66.47%), Query Frame = 2 Query: 416 AAGIEQE-ELRPISGTGRITSSSTAVHGH-GTKFMDELHAGDAIIITHPTTLREETKIVKMVLSNMSLGISSPFGSDLITTTKFRYIKAPRVEKSADARADETKRRKIQETDSATGTYAG--SGGHRLVYRERTA--QGNYRIIEETVDEAMSREQLLDLRAKKKADRHC 907 AA E+E +L + GTGRI +S T V G GT+F EL GDA+II HPT+L+EET+I+ MVLS++S+ ISSPF +DL++TT F YIKAP+ E ++ KR+K E A GTYAG + G YR + A G Y I++ET D SRE LLD+R+KKK DRHC Sbjct: 43 AAPAEEEFQLVKVQGTGRILTSGTTVMGKMGTRFSHELSIGDALIIVHPTSLKEETRIITMVLSDVSVSISSPFSTDLVSTTTFSYIKAPKEEVDVADLENKKKRKKNDEELFAFGTYAGGTTAGTEFTYRVKKAGVYGGYAILKETADSNRSREDLLDIRSKKKGDRHC 212
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Match: A0A7S3ZK63_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZK63_9STRA) HSP 1 Score: 145 bits (365), Expect = 7.110e-37 Identity = 78/146 (53.42%), Postives = 103/146 (70.55%), Query Frame = 2 Query: 452 SGTGRITSSSTAVHGH-GTKFMDELHAGDAIIITHPTTLREETKIVKMVLSNMSLGISSPFGSDLITTTKFRYIKAPRVEKSADARADETKRRKIQETDSATGTYAGSGGHRLVYRERT-----AQGNYRIIEETVDEAMSREQLL 871 +G+GRI+SS TAV GH GT+FM EL AGDA++ITHPTTL EET+IVKMVLS++S+ ISS F SDL++TT FRY+ APRVE+SA + + +R++ D A G YAG GG LVYR R ++I+ E + E +R +LL Sbjct: 67 AGSGRISSSGTAVRGHDGTRFMAELRAGDAVVITHPTTLTEETRIVKMVLSDVSIAISSAFSSDLVSTTAFRYVAAPRVEQSAADKERDAAQRRVLREDGAVGDYAGGGGTTLVYRTRKKGAVGGSNGWKIVTEKLAEPKTRTELL 212
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Match: M4BTL8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTL8_HYAAE) HSP 1 Score: 142 bits (359), Expect = 6.610e-36 Identity = 99/230 (43.04%), Postives = 133/230 (57.83%), Query Frame = 2 Query: 242 GGRLVFKGGEAAVSSKGKKKEKIKRKREKALVLAGIGGDVVPSDGTGATSAVDTTDGGAAGIEQEELRPISGTGRITSSSTAVHGH-GTKFMDELHAGDAIIITHPTTLREETKIVKMVLSNMSLGISSPFGSDLITTTKFRYIKAPRVEKSADA---RADETKRRKIQETDSATGTYAGSG--GHRLVYRERT--AQGNYRIIEETVDEAMSREQLLDLRAKKKADRHC 907 GG+L KGG S+K K K K++ A G + S +G T A +L I G+GR+ SS T + G GTKF+ EL GDA++I HPT+L +ET+IV+MVLS++S +SS F SDL+++T F YI+AP +K + +A K RK +ET A GTYAG G +L YR + A G Y I++E +E SRE LLD+RAKKK DRHC Sbjct: 9 GGKLTLKGGVPLKSTK-----KRKHKKKPAKSQEGTTPEHTSSHSSGHTVA-----------STYDLVKIRGSGRLLSSGTTLMGQVGTKFLQELKVGDALVIQHPTSLVDETRIVRMVLSDVSASVSSAFSSDLVSSTPFYYIRAPPDDKKHEGEELKARLKKHRKDEET--AFGTYAGGTEKGGQLTYRVKKSGAYGGYAIVKEDTNEERSREDLLDIRAKKKGDRHC 220 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig100.88.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig100.88.1 >prot_D-dichotoma_M_contig100.88.1 ID=prot_D-dichotoma_M_contig100.88.1|Name=mRNA_D-dichotoma_M_contig100.88.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=227bp MPKGGRLVFKGGEAAVSSKGKKKEKIKRKREKALVLAGIGGDVVPSDGTGback to top mRNA from alignment at D-dichotoma_M_contig100:280762..285347+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig100.88.1 ID=mRNA_D-dichotoma_M_contig100.88.1|Name=mRNA_D-dichotoma_M_contig100.88.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=4586bp|location=Sequence derived from alignment at D-dichotoma_M_contig100:280762..285347+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig100:280762..285347+ >mRNA_D-dichotoma_M_contig100.88.1 ID=mRNA_D-dichotoma_M_contig100.88.1|Name=mRNA_D-dichotoma_M_contig100.88.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1362bp|location=Sequence derived from alignment at D-dichotoma_M_contig100:280762..285347+ (Dictyota dichotoma ODC1387m male)back to top |