mRNA_D-dichotoma_M_contig100.87.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Match: D7FV71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV71_ECTSI) HSP 1 Score: 291 bits (746), Expect = 1.840e-87 Identity = 183/409 (44.74%), Postives = 234/409 (57.21%), Query Frame = 1 Query: 268 GESQEGDGEEDPYGD--DDWGDTELPNDTMATILTLQREFYGSRDMKNPDSWSTQDGKVKTRTGIVLQHQLYTILENRTTADLELTDMRNKNTLRMFSLNSGRDDWAIMSTDHYLKLISRALG------------------------------SSAYAGDGDTTQALG----------------SASSSAPSVPSTMKPRTGQEAEAAFTRDVLVNLVRSITKAYVSRKDVANAMEEVSKNGQIVEADDVVVKSLKHAEACASGVNIPKQRGPKGRVKNLTVEELQGG--LPDLKTIKQEEDRVVALVGKLIRAGFLIPRRDVPREDAYWFTMPQLGKVIAAVMNGRKSIINAIKRTRYKEMRRAALESKNPAK-TGLPLSFHLRDLVGLGILLELETPSGMFLRIAKD 1341 G S+ DG+ D YGD D + +LPNDTMAT+L+LQREFYG + G V RTG+VLQHQ+YT+LENRT D+ELT MR +N LR F L +GR+DW IMST HYL++IS LG +S G +T A S +S++ SV + QE ++ R+VL LV S TKAY SRK+V N M EV ++ +G+ K + + GG DL+++KQ E+ VV+L KLIRAGFL+PRRDV RE+AYWF+MPQLGKVI ++ GRK ++ A+KRTRYKEMRRAALE KNPAK TGLPLSFH+RDL+GLG++ EL+TPSGMFLR+ D Sbjct: 53 GNSKSNDGQ-DQYGDESDIFDVADLPNDTMATVLSLQREFYGGQP---------PTGSVGERTGVVLQHQIYTVLENRTAVDVELTAMRKENVLRTFRLGTGREDWGIMSTAHYLRVISNCLGDTITRENGSKQPARTTAASVRGGHAFARSSTSTVGGSRNTANAXXXRGSXXXXXXXXXGRRSPTSTSFSVSGASPKPSAQEHHSSLARNVLERLVLSNTKAYASRKEVLNTMREVRESNTEASGGXXXXXXX-------XXXXXXXXXXXRGKGKERAPDRIMGGDEEKDLRSLKQTEEEVVSLTSKLIRAGFLLPRRDVGREEAYWFSMPQLGKVITSIARGRKDVLAALKRTRYKEMRRAALEKKNPAKATGLPLSFHVRDLLGLGMIRELDTPSGMFLRLPSD 444
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Match: W7TZ12_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ12_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.530e-23 Identity = 102/346 (29.48%), Postives = 159/346 (45.95%), Query Frame = 1 Query: 340 NDTMATILTLQREFYGSRDMKNPDSWSTQDGK--VKTRTGIVLQHQLYTILENRTTADLELTDMRNKNTLRMFSLNSGRDDWAIMSTDHYLKLISRALGSSAY-----AGDGDTTQALGSASSSAPSVPSTMKPRTGQEAEA-------AFTRDVLVNLVRSITKAYVSRKDVANAMEEVSKNGQIVEADDVVVKSLKHAEACASGVNIPKQRGPKGRVKNLTVEELQGGLPDLKTIKQEEDRVVALVGKLIRAGFLIPRRDVPRED-AYWFTMPQLGKVIAAVMNGRKSIINAIKRTRYKEMRRAALESKNPAKTGLPLSFHLRDLVGLGILLELETPSGMFLRI 1332 +D +A IL L + FY ST D + +VLQHQLYT+L++ T+ D+EL D++ N +R+F L + R D ++ T Y + A + A D + T+++ ++ + + + R + A D + V +T +++ + + E + +S+ H++A A P+ G K L LP + E RV LI GFL R D E AYWF+ P+LG V A++ GRK+I+ A+ R+RYKE+ L + T L LSFH+ DLVG G +L + T SGMFLR+ Sbjct: 62 SDVVAAILLLIQRFY--------QGTSTNDSRRLKMENCPVVLQHQLYTVLDDHTSVDVELEDLKTSNHVRLFRLLTLRRDIGVLLTSTYKARVQAAFAAFAQQEGTRGRDENITESICNSVTEREEDGNDKRSRNSSVQASKLSARHMALVSDFFLKTVDRVTNIIMTQHQLESLWGEYT-------------QSISHSQAPAC----PRSSMSAGPGKRRAAPSL---LPSI----DEVTRV------LIHYGFLARRVDAVYEGPAYWFSAPELGSVTASLPRGRKAILAALARSRYKELSEQNLGALRLKGTALSLSFHMADLVGSGEVLAVPTASGMFLRL 369
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Match: K8Z0I8_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z0I8_NANGC) HSP 1 Score: 107 bits (266), Expect = 7.290e-22 Identity = 92/306 (30.07%), Postives = 145/306 (47.39%), Query Frame = 1 Query: 454 IVLQHQLYTILENRTTADLELTDMRNKNTLRMFSLNSGRDDWAIMSTDHYLKLISRALGSSAY-----AGDGDTTQALGSASSSAPSVPSTMKPRTGQEAEA-------AFTRDVLVNLVRSITKAYVSRKDVANAMEEVSKNGQIVEADDVVVKSLKHAEACASGVNIPKQRGPKGRVKNLTVEELQGGLPDLKTIKQEEDRVVALVGKLIRAGFLIPRRDVPRED-AYWFTMPQLGKVIAAVMNGRKSIINAIKRTRYKEMRRAALESKNPAKTGLPLSFHLRDLVGLGILLELETPSGMFLRI 1332 +VLQHQLYT+L++ T+ D+EL D++ N +R+F L + R D ++ T Y + A + A D + T+++ ++ + + + R + A D + V +T +++ + + E + +S+ H++A A P+ G K L LP + E RV LI GFL R D E AYWF+ P+LG V A++ GRK+I+ A+ R+RYKE+ L + T L LSFH+ DLVG G +L + T SGMFLR+ Sbjct: 6 VVLQHQLYTVLDDHTSVDVELEDLKTSNHVRLFRLLTLRRDIGVLLTSTYKARVQAAFAAFAQQEGTRGRDENITESICNSVTEREEDGNDKRSRNSSVQASKLSARHMALVSDFFLKTVDRVTNISMTQHQLESLWGEYT-------------QSISHSQAPAC----PRSSMSAGPGKRRAAPSL---LPSI----DEVTRV------LIHYGFLARRVDAVYEGPAYWFSAPELGSVTASLPRGRKAILAALARSRYKELSEQNLGALRLKGTALSLSFHMADLVGSGEVLAVPTASGMFLRL 281
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Match: A0A0D6R9L0_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R9L0_ARACU) HSP 1 Score: 104 bits (259), Expect = 5.620e-21 Identity = 85/295 (28.81%), Postives = 126/295 (42.71%), Query Frame = 1 Query: 457 VLQHQLYTILENRTTADLELTDMRNKNTLRMFSLNSGRDDWAIMSTDHYLKLISRALGSSAYAGDGDTTQALGSASSSAPSVPSTMKPRTGQEAEAAFTRDVLVNLVRSITKAYVSRKDVANAMEEVSKNGQIVEADDVVVKSLKHAEACASGVNIPKQRGPKGRVKNLTVEELQGGLPDLKTIKQEEDRVVALVGKLIRAGFLIPRRDVPREDAYWFTMPQLGKVIAAVMNGRKSIINAIKRTRYKEMRRAALESKNPAKTGLPLSFHLRDLVGLGILLELETPSGMFLRIAKD 1341 VL+ QLY+ +++RT D EL D+RN+ LR+F LN+G+DD AIM D YLK + A IT Q DDVV+ S + + + + + EL ++K D+ ++L LI G L R + D YWF +P +G V+ ++ GRK +++ + R RYKEM +ALE ++ + L + FHLRDL+G G L + TPSG F+RIAK+ Sbjct: 84 VLRSQLYSSVKDRTQVDRELEDLRNEEVLRIFKLNTGQDDNAIMFMDDYLKQVEAA----------------------------------------------------KITM-------------------QAKHPDDVVIFDWFQTYVLTSNLGVA--------ISHSELYELLSSGGEVK------DKQISL---LINTGLLT--RQMVDSDVYWFLIPNVGTVLKSLSQGRKELLSFLNRRRYKEMSLSALEKRHLRLSKLDIRFHLRDLIGCGQLKVIHTPSGTFIRIAKE 288
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Match: A0A067JUL4_JATCU (Uncharacterized protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JUL4_JATCU) HSP 1 Score: 103 bits (257), Expect = 2.320e-20 Identity = 85/302 (28.15%), Postives = 138/302 (45.70%), Query Frame = 1 Query: 457 VLQHQLYTILENRTTADLELTDMRNKNTLRMFSLNSGRDDWAIMSTDHYLKLISRALGSSAYAGDGDTTQALGSASSSAPSVPSTMKPRTGQEAEAAFTRDVL-VNLVRSITKAYVSRKDVANAMEEVSKNGQIVEADDVVVKSLKHAEACASGVNIPKQRGPKGRVKNLTVEELQGGLPDLKTIKQEEDRVVALVGKLIRAGFLI------PRRDVPREDAYWFTMPQLGKVIAAVMNGRKSIINAIKRTRYKEMRRAALESKNPAKTGLPLSFHLRDLVGLGILLELETPSGMFLRIAKD 1341 +L+ QLY+ +++RT D EL +R + LR+F LN+G+DD AIM D Y+ I R + K ++G E F V+ V L SI D +S G++ + ++ + + C + + + +V NL V E + L I D + A+V + + F+ R + + YWF +P +G V+ + GRK +++ + R RYKEM A LE K + L + FHLRDL+G G L + TP+G+ +R++KD Sbjct: 67 ILRSQLYSCVKDRTQVDRELESLRREKLLRVFKLNTGQDDHAIMFLDDYMSQIERVV------------------------KRMKEKKQSGLEVFEWFRTHVIDVKLEPSI--------DHQELCGLLSHGGKLKDEQISLLINAGLLDYCENTFMLHVNE--QNQV-NLGVVEAEVSKSGLSDIGGRNDLLGAVVDDISKVEFVALSEGSNETRQLIDPNMYWFAVPNIGSVLKGLSQGRKELLSLLNRRRYKEMMLANLEKKRLRLSTLDIRFHLRDLIGSGHLKTVNTPTGLIVRVSKD 333
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Match: A0A7I8IXA3_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8IXA3_SPIIN) HSP 1 Score: 90.9 bits (224), Expect = 1.390e-16 Identity = 80/295 (27.12%), Postives = 131/295 (44.41%), Query Frame = 1 Query: 457 VLQHQLYTILENRTTADLELTDMRNKNTLRMFSLNSGRDDWAIMSTDHYLKLISRALGSSAYAGDGDTTQALGSASSSAPSVPSTMKPRTGQEAEAAFTRDVLVNLVRSITKAYVSRKDVANAMEEVSKNGQIVEADDVVVKSLKHAEACASGVNIPKQRGPKGRVKNLTVEELQGGLPDLKTIKQEEDRVVALVGKLIRAGFLIPRRDVPREDAYWFTMPQLGKVIAAVMNGRKSIINAIKRTRYKEMRRAALESKNPAKTGLPLSFHLRDLVGLGILLELETPSGMFLRIAKD 1341 VL+ QLY+ +++RT D EL ++ + LR+F LN+G+DD A+M D Y I A+ + LG T++ + V K YV+ + DV + H E C+ L+ GG +K+E V LI AGFL R + YWF++P +G ++ + GRK +++ +++ +++EM AALE K + L + FHLRDL+G G+L +E+P+G+ +R++KD Sbjct: 59 VLRSQLYSSIKDRTQVDRELESLKKEKVLRIFKLNTGQDDHAVMFMDDYNNQIGVAM------------KRLG-------------------------TKNEDLIQVFEWFKTYVTGTKL-----------------DV---GIDHNELCSL----------------LSF----GG-----KVKEEH------VSLLINAGFLT--RQLVDPSMYWFSIPNIGLLLKGLSQGRKELVSLLRKRKHREMMLAALEKKRLRLSLLDMRFHLRDLIGSGVLKTVESPTGLIVRLSKD 263
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Match: A0A833R7C1_9POAL (Serine/threonine-protein kinase 19 isoform X1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R7C1_9POAL) HSP 1 Score: 89.0 bits (219), Expect = 7.030e-16 Identity = 76/297 (25.59%), Postives = 126/297 (42.42%), Query Frame = 1 Query: 457 VLQHQLYTILENRTTADLELTDMRNKNTLRMFSLNSGRDDWAIMSTDHYLKLISRALGSSAYAGDGDTTQALGSASSSAPSVPSTMKPRTGQEAEAAFTRDVLVNLVRSITKAYV--SRKDVANAMEEVSKNGQIVEADDVVVKSLKHAEACASGVNIPKQRGPKGRVKNLTVEELQGGLPDLKTIKQEEDRVVALVGKLIRAGFLIPRRDVPREDAYWFTMPQLGKVIAAVMNGRKSIINAIKRTRYKEMRRAALESKNPAKTGLPLSFHLRDLVGLGILLELETPSGMFLRIAKD 1341 +L+ QLY+ +++RT D +L ++ + +R+F LN+G DD AIM D YL + A+ + +D ++ V K YV S+ DV ++ H E C+ N G K++T+ LI AG L R + ++ YWF +P +G ++ + GRK +I+ I RT+YKEM A LE K + L + FH+RDL+G G+L +++P G+ +R+++D Sbjct: 65 ILRSQLYSSVKDRTQVDRDLESLKKEAVVRVFKLNTGTDDNAIMFMDDYLIQMDNAV-------------------------------------KRLDVKDRELSEVFGWFKQYVIKSKTDV----------------------TISHPELCSLLSN-----GGDVTEKHVTL--------------------------LINAGLLT--RQLIDQNLYWFAIPNIGSILKGLSQGRKELISLINRTKYKEMVLANLEKKKLRLSPLDIRFHIRDLIGSGLLKTVQSPIGILIRLSRD 269
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Match: A0A7I8KNL8_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KNL8_SPIIN) HSP 1 Score: 86.7 bits (213), Expect = 3.460e-15 Identity = 77/292 (26.37%), Postives = 129/292 (44.18%), Query Frame = 1 Query: 466 HQLYTILENRTTADLELTDMRNKNTLRMFSLNSGRDDWAIMSTDHYLKLISRALGSSAYAGDGDTTQALGSASSSAPSVPSTMKPRTGQEAEAAFTRDVLVNLVRSITKAYVSRKDVANAMEEVSKNGQIVEADDVVVKSLKHAEACASGVNIPKQRGPKGRVKNLTVEELQGGLPDLKTIKQEEDRVVALVGKLIRAGFLIPRRDVPREDAYWFTMPQLGKVIAAVMNGRKSIINAIKRTRYKEMRRAALESKNPAKTGLPLSFHLRDLVGLGILLELETPSGMFLRIAKD 1341 ++LY+ +++RT D EL ++ + LR+F LN+G+DD A+M D Y I A+ + LG T++ + V K YV+ + DV + H E C+ L+ GG +K+E V LI AGFL R + YWF++P +G ++ + GRK +++ +++ +++EM AALE K + L + FHLRDL+G G+L +E+P+G+ +R++KD Sbjct: 56 NKLYSSIKDRTQVDRELESLKKEKVLRIFKLNTGQDDHAVMFMDDYNNQIGVAM------------KRLG-------------------------TKNEDLIQVFEWFKTYVTGTKL-----------------DV---GIDHNELCSL----------------LSF----GG-----KVKEEH------VSLLINAGFLT--RQLVDPSMYWFSIPNIGLLLKGLSQGRKELVSLLRKRKHREMMLAALEKKRLRLSLLDMRFHLRDLIGSGVLKTVESPTGLIVRLSKD 257
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Match: A0A250XAB7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XAB7_9CHLO) HSP 1 Score: 84.0 bits (206), Expect = 1.150e-13 Identity = 90/350 (25.71%), Postives = 149/350 (42.57%), Query Frame = 1 Query: 310 DDDWGDTELPNDTMATILTLQREFYGSRDMKNPDSWSTQDGKVKTRTGIVLQHQLYTILENRTTADLELTDMRNKNTLRMFSLNSGRDDWAIMSTDHYLKLISRALGSSAYAGDGDTTQALGSASSSAPSVPSTMKPRTGQEAEAAFTRDVLVNLVRSITKAYVSRKDVANAMEEVSKNGQIVEADDVVVKSLKHAEACASGVNIPKQRGPKGRVKNLTVEELQGGL------PDLKTIKQEEDRVVALVGKLIRAGFLIPRRDVPREDAYWFTMPQLGKVIAAVMNGRKSIINAIKRTRYKEMRRAALESKNPAKTG-LPLSFHLRDLVGLGILLELETPSGMFLRIAK 1338 DDD T P+D A + TL+ + T +VL+ QL ++L + T D EL MR N +R+F +N+G DD A++ T+ Y+ ++ +A A + +AS S+PS P PR E ++VL + V + ++ K + + + S + DD + + + GP V++ + P T A + L++ G L R E Y +P +G+ I A+ +GRK + +K+ Y+E+ L K K LP+SFHLRDL+G G L ++TP G +++ K Sbjct: 41 DDDIDSTIFPSDLAAMVQTLRSRILAAN-------------LSPTYPPVVLRTQLCSMLPDFTRMDRELDAMRRNNVIRIFRINTGSDDQALLLTEDYMDVLRKAASVEA---------SNSTASHSSPSPP----PR---ECVELLIQNVLPHHVDTAI-SHQRLKALLTSHQCHSTRYAAHQVDDSTLHMIHNY-----------LEGPLKYVRSSESSQCSSSCCNDKEAPGSNTGGMVHTAADASLSVLMQLGVL--SRHPSEEGWYMLCVPGIGRAIQAIKDGRKELEGLLKQRVYREIPEQQLLFKTKLKKSPLPVSFHLRDLLGYGALERIKTPGGSVIKLVK 347
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Match: A0A1R3K7R9_COCAP (Serine-threonine protein kinase 19 n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3K7R9_COCAP) HSP 1 Score: 82.0 bits (201), Expect = 1.490e-13 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 1039 VGKLIRAGFLIPRRDVPREDAYWFTMPQLGKVIAAVMNGRKSIINAIKRTRYKEMRRAALESKNPAKTGLPLSFHLRDLVGLGILLELETPSGMFLRIAKD 1341 + LI AG L R + YWF +P +G ++ + GRK +++ + R RYKEM A LE + L + FHLRDL+G G+L TP+G+ +RI+KD Sbjct: 167 ISLLINAGLLT--RQLIDPSMYWFAIPNIGSILKGLSQGRKEVLSLLNRRRYKEMMLAPLEKMRLRFSPLDMRFHLRDLIGSGLLKTAHTPTGIVIRISKD 265 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig100.87.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig100.87.1 >prot_D-dichotoma_M_contig100.87.1 ID=prot_D-dichotoma_M_contig100.87.1|Name=mRNA_D-dichotoma_M_contig100.87.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=425bp MDEYMSSGGPNGSRKRRRTEVGKTTDSQVLSSNPSLDSLLHRSGPLGQLRback to top mRNA from alignment at D-dichotoma_M_contig100:277137..280607- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig100.87.1 ID=mRNA_D-dichotoma_M_contig100.87.1|Name=mRNA_D-dichotoma_M_contig100.87.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=3471bp|location=Sequence derived from alignment at D-dichotoma_M_contig100:277137..280607- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig100:277137..280607- >mRNA_D-dichotoma_M_contig100.87.1 ID=mRNA_D-dichotoma_M_contig100.87.1|Name=mRNA_D-dichotoma_M_contig100.87.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=2550bp|location=Sequence derived from alignment at D-dichotoma_M_contig100:277137..280607- (Dictyota dichotoma ODC1387m male)back to top |