prot_D-herbacea_F_contig102.351.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig102.351.1
Unique Nameprot_D-herbacea_F_contig102.351.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length313
Homology
BLAST of mRNA_D-herbacea_F_contig102.351.1 vs. uniprot
Match: A0A6H5KUF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF6_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 4.660e-81
Identity = 126/228 (55.26%), Postives = 160/228 (70.18%), Query Frame = 0
Query:   96 RACTADELLP---DYTDR------DLSAMWSEDSMISPPFDCTCNTLKASYYCPSLGTEGYPKWIPRVVADNECKPISRESLRHSPLPPGFRVLFYGNSHLRQVMEGIVCAFQSSVKKRRVTVVSNHDAIR-QDVIVEPEVHCRSCVSSAHSMMTVLVDHGCVKGAAKTNACSCDDNNSVFEFDNGSVLHYHFAHKEEGKRIEDALRVHGTNYKDYDAVVANLGNEPR 313
            RACT D+L+P   +Y D       DLS MW + SM++PPFDCTC TLKASY+CP+LGT GYPKW         C+   R +L++ PLPP FRVLFYGNSHLRQV+EGIVCA+ +S++ R + VV    ++  +D +V+ ++ CR CV+S H    +L++H C+   AK  ACSCDDN SVFEFDNG+ +HYHFAHKEE KR EDAL+  GT Y  YD VV NLGN+PR
Sbjct:   91 RACTVDDLVPPHGNYEDGGGDGGYDLSGMWDKSSMVAPPFDCTCRTLKASYFCPNLGTGGYPKWN----TSGACERRERSALQNEPLPPAFRVLFYGNSHLRQVVEGIVCAYSTSIRSRCLRVVVGGGSLAPEDALVDEDLQCRGCVNS-HKQRNMLLEHECISEEAKKEACSCDDNESVFEFDNGAAIHYHFAHKEENKRFEDALKYRGTEYSFYDVVVGNLGNDPR 313          
BLAST of mRNA_D-herbacea_F_contig102.351.1 vs. uniprot
Match: D7G2P7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P7_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 6.610e-75
Identity = 117/211 (55.45%), Postives = 149/211 (70.62%), Query Frame = 0
Query:  111 DLSAMWSEDSMISPPFDCTCN-------TLKASYYCPSLGTEGYPKWIPRVVADNECKPISRESLRHSPLPPGFRVLFYGNSHLRQVMEGIVCAFQSSVKKRRVTVVSNHDAIRQ-DVIVEPEVHCRSCVSSAHSMMTVLVDHGCVKGAAKTNACSCDDNNSVFEFDNGSVLHYHFAHKEEGKRIEDALRVHGTNYKDYDAVVANLGNEPR 313
            DLS MW + SM++PPFDCTC+        L ASY+CP+LGT GYPKW         C+   R +L++ PLPPGFRVLFYGNSHLRQV+EGIVCA+ SS++ R + VV + +++ Q D +V+ ++ CRSCV S   +   L++H C+   AK  AC CDD+ SVFEFDNG+ +HYHFAHKEE KR EDAL+  GT Y  YDAVV NLGN+PR
Sbjct:  112 DLSGMWDKSSMVAPPFDCTCSGSGRAGRALNASYFCPNLGTGGYPKWS----TSGGCERRERSALQNEPLPPGFRVLFYGNSHLRQVVEGIVCAYSSSIRSRCLRVVVDGESLAQEDTLVDEDLQCRSCVYS-RKLRRTLLEHECISEDAKEEACRCDDDESVFEFDNGAAIHYHFAHKEENKRFEDALQYRGTEYSSYDAVVGNLGNDPR 317          
BLAST of mRNA_D-herbacea_F_contig102.351.1 vs. uniprot
Match: A0A6H5KAG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG2_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.310e-35
Identity = 86/229 (37.55%), Postives = 121/229 (52.84%), Query Frame = 0
Query:   96 RACTADELLP--DYTDRDLSAMWSEDS--MISPPFDCTCNTLKASYYCPSLGTEGYPKWIPRVVADNECKPISRESL--RHSPLPPGFRVLFYGNSHLRQVMEGIVCAFQSSVKKRRVTVVSNHDAIRQDVIVEP-EVHCRSCVSSAHSMMTVLVDHGCV----KGAAKTNACSCDDNNSVFEFDNGSVLHYHFAHKEEGKRIEDALRVHGT-NYKDYDAVVANLGNEP 312
            R CT DELLP        LS+ WS+    +  PP+ C C   KA Y+CP+LG+  YP+W+PR V   +C+  +RE +  R +P PP  +VLFYGNSH+RQ +E I+C FQ  V  +R+  VS  +A     +  P +  CR+C S        L++ GC+                         NG+V+H++FA+ +E KRI DAL  H   +   Y AV AN GN+P
Sbjct:  120 RYCTVDELLPLKKSPHSALSSEWSQGQGGVWKPPYGCDCAFSKARYFCPNLGSGVYPRWVPRAVTRGDCRSATREEMSSRGAPFPPDSKVLFYGNSHMRQTLEAILCLFQKDVVSKRLRFVSATNANETAYLEVPGDTPCRAC-SVWTFFKDTLLNSGCIGXXXXXXXXXXXXXXXXXXXXXXXSNGAVVHFYFANHDEDKRITDALAPHHKEDLSYYTAVFANPGNKP 347          
BLAST of mRNA_D-herbacea_F_contig102.351.1 vs. uniprot
Match: A0A835Z986_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z986_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.160e-23
Identity = 69/196 (35.20%), Postives = 98/196 (50.00%), Query Frame = 0
Query:  124 PPFDCTCNTLKASYYCPSLGTEGYPKWIPRVVADNECKPISRESLRHSPL-PPGFRVLFYGNSHLRQVMEGIVCAFQSSVKKRRVTVVSNHDAIRQDVIVEPEVHCRSCVSSAHSMMTVLVDHGC-----VKGAAKTNACSCDDNNSVFEFDNGSVLHYHFAHKEEGKRIEDALR-VHGTNYKDYDAVVANLGNEP 312
            P +DC+C   KA Y+C        P W+PR +   EC+     +L H+PL PPG RVLF GNSH+RQ++E  +CA +  V +R V+           V+ +  + CR         +   +D GC     V G A      C D+ + F   NG+ + Y F H+E  K I+  +    GT+ +DYD VVAN GN P
Sbjct:   68 PLYDCSCPLAKARYHCHEFNAVDGPVWVPRALVKGECR-----ALPHNPLVPPGARVLFAGNSHMRQLVESGLCAHRHEVARRNVSA---------GVLEDISIPCRGF------RLKHYLD-GCPYEPSVLGVAP-GQLECSDDRATFTLSNGATVSYVFMHREVNKTIDQFIGPTFGTSLRDYDIVVANAGNAP 241          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig102.351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KUF6_9PHAE4.660e-8155.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2P7_ECTSI6.610e-7555.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAG2_9PHAE1.310e-3537.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z986_9STRA1.160e-2335.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig102contigD-herbacea_F_contig102:407051..421147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig102.351.1mRNA_D-herbacea_F_contig102.351.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig102 406892..421147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig102.351.1 ID=prot_D-herbacea_F_contig102.351.1|Name=mRNA_D-herbacea_F_contig102.351.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=313bp
MTTANIVQQCTGRRRDGARGVGGGALLLQGGGGALRRANERALEVCQNTV
TSNNKECSPMLRLLVLVLLVCSVVSTDADPTLVSLHSKGSTASNHRACTA
DELLPDYTDRDLSAMWSEDSMISPPFDCTCNTLKASYYCPSLGTEGYPKW
IPRVVADNECKPISRESLRHSPLPPGFRVLFYGNSHLRQVMEGIVCAFQS
SVKKRRVTVVSNHDAIRQDVIVEPEVHCRSCVSSAHSMMTVLVDHGCVKG
AAKTNACSCDDNNSVFEFDNGSVLHYHFAHKEEGKRIEDALRVHGTNYKD
YDAVVANLGNEPR
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