prot_D-herbacea_F_contig102.345.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig102.345.1
Unique Nameprot_D-herbacea_F_contig102.345.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length116
Homology
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BLAST of mRNA_D-herbacea_F_contig102.345.1 vs. uniprot
Match: D8LKT4_ECTSI (DUF202 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKT4_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 2.270e-25
Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 0 
Query:    1 MSSPHRRKGGVLHI-EKKTVNVRYKGREHTITWFSGASDEAISRAIDKALGLPRKNPPIITITDPEDGSALTISDSIPDGLTLDAKAVAVSNVEGGALRGQDVNTSRSESPSDG 113
            MSS   R GG L +  KK + VRY+GREH ++WF+GASDEAI+R I+ AL LPR  P ++   DPEDGSAL +SDS+PDGLT+DA AV        A  G D +  R+ES  +G
Sbjct:    1 MSSLRHRTGGTLDVGSKKAITVRYEGREHAVSWFAGASDEAITRTIELALRLPRGTPAVVR--DPEDGSALAVSDSLPDGLTVDATAVP-------ACSGGDNDRRRAESSGNG 105
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BLAST of mRNA_D-herbacea_F_contig102.345.1 vs. uniprot
Match: A0A7S2FKJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKJ2_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 6.420e-5
Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:   16 KKTVNVRYKGREHTITWFSGASDEAISRAIDKALGLPRKNPPIITITDPEDGSALTISDSIPDGLTL 82
            +KTV VR  G+E T+ WF GASDE+I  +I  AL +   +     +    DG+ + +S ++P GLTL
Sbjct:    4 RKTVVVRGHGKEATVGWFEGASDESIKTSITSALLMKADS----IVARDLDGNVVAVSQAMPSGLTL 66
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig102.345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKT4_ECTSI2.270e-2552.63DUF202 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2FKJ2_9STRA6.420e-540.30Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig102contigD-herbacea_F_contig102:265386..279684 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig102.345.1mRNA_D-herbacea_F_contig102.345.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig102 265386..279998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig102.345.1 ID=prot_D-herbacea_F_contig102.345.1|Name=mRNA_D-herbacea_F_contig102.345.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=116bp
MSSPHRRKGGVLHIEKKTVNVRYKGREHTITWFSGASDEAISRAIDKALG
LPRKNPPIITITDPEDGSALTISDSIPDGLTLDAKAVAVSNVEGGALRGQ
DVNTSRSESPSDGRRP
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