prot_D-herbacea_F_contig102.333.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig102.333.1
Unique Nameprot_D-herbacea_F_contig102.333.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length241
Homology
BLAST of mRNA_D-herbacea_F_contig102.333.1 vs. uniprot
Match: A0A6H5L1L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L5_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 8.430e-83
Identity = 132/194 (68.04%), Postives = 156/194 (80.41%), Query Frame = 0
Query:   47 TPLSAEEARDVMSDQPTGAVPSAEEMEDRRDAQSSADNLLPTDKLENGLKHARMLLATGWTSFASSVRELEQTETVSKIKEGTVTVVDRSMDGLSKVGSKVAEVTDRGVQAVGAKIDEAAPTVGRWRDEVVIASERGFAAAKEMTDKAIAEIKKPGGSNGGAGGTTYGEGTWXXXXXXXXXXXGSANEDGPHTV 240
            TPL+AEE  DV ++QPTG VPSAEEMEDR+DA SS+DNLLPTDKLENGL+HA+M+ ATGW S A++ R+LE+TET  KIKEGTV +VDRSMDGLSKVG K++E T++GVQ VGAK++EAAPT+GRWRDEVVIASERGFAAAK+MTDKA+AEIKKPGGSNGG+G                    G   +DGPHTV
Sbjct:   55 TPLTAEETADVFNEQPTGEVPSAEEMEDRKDATSSSDNLLPTDKLENGLRHAKMIFATGWASVAATYRDLERTETAEKIKEGTVNLVDRSMDGLSKVGCKISETTEKGVQVVGAKMEEAAPTLGRWRDEVVIASERGFAAAKDMTDKAMAEIKKPGGSNGGSG--------------PAAGRSGEGGDDGPHTV 234          
BLAST of mRNA_D-herbacea_F_contig102.333.1 vs. uniprot
Match: D7G658_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G658_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 8.510e-72
Identity = 115/169 (68.05%), Postives = 136/169 (80.47%), Query Frame = 0
Query:   72 MEDRRDAQSSADNLLPTDKLENGLKHARMLLATGWTSFASSVRELEQTETVSKIKEGTVTVVDRSMDGLSKVGSKVAEVTDRGVQAVGAKIDEAAPTVGRWRDEVVIASERGFAAAKEMTDKAIAEIKKPGGSNGGAGGTTYGEGTWXXXXXXXXXXXGSANEDGPHTV 240
            MEDR+DA SS+DNLLPTDKLENGL+HA+M+ ATGW S A++ R+LE+TET  KIKEGTV +VDRSMDGLSKVG K++E T++GVQ VGAK++EAAPT+GRWRDEVVIASERGFAAAK+MTDKA+AE+KKPGGSNGGAG    G               G   +DGPHTV
Sbjct:    1 MEDRKDATSSSDNLLPTDKLENGLRHAKMIFATGWASVAATYRDLERTETAEKIKEGTVNLVDRSMDGLSKVGCKISETTEKGVQVVGAKMEEAAPTLGRWRDEVVIASERGFAAAKDMTDKAMAEMKKPGGSNGGAGPAAGGS--------------GEGGDDGPHTV 155          
BLAST of mRNA_D-herbacea_F_contig102.333.1 vs. uniprot
Match: A0A835ZI10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI10_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.350e-14
Identity = 37/105 (35.24%), Postives = 64/105 (60.95%), Query Frame = 0
Query:   74 DRRDAQSSADNLLPTDKLENGLKHARMLLATGWTSFASSVRELEQTETVSKIKEGTVTVVDRSMDGLSKVGSKVAEVTDRGVQAVGAKIDEAAPTVGRWRDEVVI 178
            D    ++SA N++PT++L+NGL+ A+ L   GW     + + +E +E V+++KE    VV+R+  GLS+VG  V   T +G+Q  G + +EA P +  ++D  V+
Sbjct:   24 DEDQPRTSAQNVIPTEQLQNGLRTAKSLWLVGWNGVKDTWKTVESSEQVARLKEAAAPVVERAATGLSEVGQTVGAATQKGMQWTGERFEEAKPHLVEFKDRAVV 128          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig102.333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L1L5_9PHAE8.430e-8368.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G658_ECTSI8.510e-7268.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZI10_9STRA1.350e-1435.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig102contigD-herbacea_F_contig102:17753..26712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig102.333.1mRNA_D-herbacea_F_contig102.333.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig102 17150..26871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig102.333.1 ID=prot_D-herbacea_F_contig102.333.1|Name=mRNA_D-herbacea_F_contig102.333.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=241bp
MSNFESSSSELVAGGAGESGEVANKRMSPLGVANSGSGGGAPREDSTPLS
AEEARDVMSDQPTGAVPSAEEMEDRRDAQSSADNLLPTDKLENGLKHARM
LLATGWTSFASSVRELEQTETVSKIKEGTVTVVDRSMDGLSKVGSKVAEV
TDRGVQAVGAKIDEAAPTVGRWRDEVVIASERGFAAAKEMTDKAIAEIKK
PGGSNGGAGGTTYGEGTWGGSSGGDGGNTGSANEDGPHTV*
back to top