mRNA_D-herbacea_M_contig9.15673.1 (mRNA) Desmarestia herbacea DmunM male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_M_contig9.15673.1
Unique NamemRNA_D-herbacea_M_contig9.15673.1
TypemRNA
OrganismDesmarestia herbacea DmunM male (Desmarestia herbacea DmunM male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_M_contig9.15673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_M_contig9contigD-herbacea_M_contig9:1856190..1856757 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunM male vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunM male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size568
Cds size363
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935678.4143853-CDS-D-herbacea_M_contig9:1856189..18565521622935678.4143853-CDS-D-herbacea_M_contig9:1856189..1856552Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 1856190..1856552 +
1690880653.8879664-CDS-D-herbacea_M_contig9:1856189..18565521690880653.8879664-CDS-D-herbacea_M_contig9:1856189..1856552Desmarestia herbacea DmunM maleCDSD-herbacea_M_contig9 1856190..1856552 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935678.426596-UTR-D-herbacea_M_contig9:1856552..18567571622935678.426596-UTR-D-herbacea_M_contig9:1856552..1856757Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig9 1856553..1856757 +
1690880653.9016802-UTR-D-herbacea_M_contig9:1856552..18567571690880653.9016802-UTR-D-herbacea_M_contig9:1856552..1856757Desmarestia herbacea DmunM maleUTRD-herbacea_M_contig9 1856553..1856757 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_M_contig9.15673.1prot_D-herbacea_M_contig9.15673.1Desmarestia herbacea DmunM malepolypeptideD-herbacea_M_contig9 1856190..1856552 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_M_contig9.15673.1

>prot_D-herbacea_M_contig9.15673.1 ID=prot_D-herbacea_M_contig9.15673.1|Name=mRNA_D-herbacea_M_contig9.15673.1|organism=Desmarestia herbacea DmunM male|type=polypeptide|length=121bp
MTTYLSPCYDYYYTFSWKPKLQHHHNHLSPAAATASSSCSQRDNRDPRSY
RTNRRAQQKPTGGGIFTQLPCPTSTPPQQSLAPDHTALLGRGGGAQAPPR
GFFSRLSHHDVAGLYNGRRF*
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mRNA from alignment at D-herbacea_M_contig9:1856190..1856757+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_M_contig9.15673.1 ID=mRNA_D-herbacea_M_contig9.15673.1|Name=mRNA_D-herbacea_M_contig9.15673.1|organism=Desmarestia herbacea DmunM male|type=mRNA|length=568bp|location=Sequence derived from alignment at D-herbacea_M_contig9:1856190..1856757+ (Desmarestia herbacea DmunM male)
ATGACCACCTACCTATCTCCCTGCTACGACTACTACTATACCTTCTCTTG
GAAGCCAAAGTTACAACATCATCATAACCATCTATCTCCTGCCGCCGCTA
CCGCCTCTTCTAGCTGCAGTCAACGCGACAACCGCGACCCTCGAAGCTAC
CGCACCAACCGCCGCGCCCAACAAAAACCAACCGGTGGTGGAATTTTCAC
CCAACTTCCATGCCCTACGAGTACGCCGCCCCAACAATCCCTTGCGCCGG
ACCACACAGCTCTCCTCGGGAGGGGGGGGGGAGCACAAGCCCCTCCGCGC
GGCTTCTTCTCCCGCCTGAGTCACCACGACGTCGCCGGACTCTACAATGG
CCGACGCTTCTAAGGACCATTCTCGGGACTGTTCTGCTGCGGTGGTACCG
TTCTTCTTCGTTGCAGTTCCGTCGTCGTCGGCGTTGGTACTTTTACTAGG
AGAAGGATTGCCGTTGGCCCCGGAATAAGAAGAAGATGGGCAAGAAGAAC
GCCTCTTTTCTCTTTCTCCGCGTCCTTCTCCGTGTCCGTGTCCTCTTACG
TGTCCTTGTCGAGAGGGC
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Coding sequence (CDS) from alignment at D-herbacea_M_contig9:1856190..1856757+

>mRNA_D-herbacea_M_contig9.15673.1 ID=mRNA_D-herbacea_M_contig9.15673.1|Name=mRNA_D-herbacea_M_contig9.15673.1|organism=Desmarestia herbacea DmunM male|type=CDS|length=726bp|location=Sequence derived from alignment at D-herbacea_M_contig9:1856190..1856757+ (Desmarestia herbacea DmunM male)
ATGACCACCTACCTATCTCCCTGCTACGACTACTACTATACCTTCTCTTG
GAAGCCAAAGTTACAACATCATCATAACCATCTATCTCCTGCCGCCGCTA
CCGCCTCTTCTAGCTGCAGTCAACGCGACAACCGCGACCCTCGAAGCTAC
CGCACCAACCGCCGCGCCCAACAAAAACCAACCGGTGGTGGAATTTTCAC
CCAACTTCCATGCCCTACGAGTACGCCGCCCCAACAATCCCTTGCGCCGG
ACCACACAGCTCTCCTCGGGAGGGGGGGGGGAGCACAAGCCCCTCCGCGC
GGCTTCTTCTCCCGCCTGAGTCACCACGACGTCGCCGGACTCTACAATGG
CCGACGCTTCTAAATGACCACCTACCTATCTCCCTGCTACGACTACTACT
ATACCTTCTCTTGGAAGCCAAAGTTACAACATCATCATAACCATCTATCT
CCTGCCGCCGCTACCGCCTCTTCTAGCTGCAGTCAACGCGACAACCGCGA
CCCTCGAAGCTACCGCACCAACCGCCGCGCCCAACAAAAACCAACCGGTG
GTGGAATTTTCACCCAACTTCCATGCCCTACGAGTACGCCGCCCCAACAA
TCCCTTGCGCCGGACCACACAGCTCTCCTCGGGAGGGGGGGGGGAGCACA
AGCCCCTCCGCGCGGCTTCTTCTCCCGCCTGAGTCACCACGACGTCGCCG
GACTCTACAATGGCCGACGCTTCTAA
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