prot_D-herbacea_F_contig100.239.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig100.239.1
Unique Nameprot_D-herbacea_F_contig100.239.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length258
Homology
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BLAST of mRNA_D-herbacea_F_contig100.239.1 vs. uniprot
Match: D7FHX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX2_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 8.160e-32
Identity = 95/240 (39.58%), Postives = 127/240 (52.92%), Query Frame = 0 
Query:   16 RIPLLRRNANGAQVPAGSIVVDFLFVEG-QEPQRGVEDLGDHPSIASISSTTASSTGNGTTDNVPPASNRGVRAAYFWPVMRQLGGPYRKPTLLSAVTMVIG-VIAMRLL-MLEPPPPPDLIPIRVPFKIYAGKYKGSNTHHIRLQDDGNVVVAMGRKPPSSSWGSRGTAATDVILWESGPL-------ERSVEGSGDPRSAKKA-----VCRKCQLVVDKDGNLVLLRAKESLASFSPS 240
            R+P +     G+QVPAGS++++++ V G  +P   V    +     S+S   A +T     D     S  GV +      M +L  P RKP LL+ V  VI  V+A+RL  +     P DL PI VPFK+  GK+KGS+THHIRLQ DGNVVVA G KP  ++ G+         LW+SGPL       +RS    GD    K        C+KCQ+ V K+G L L R +E LA FSP+
Sbjct:  110 RLPTVGPKLEGSQVPAGSVILEYMLVPGIPQPVAPVSTETE----GSLSGLAARTTAPFREDGGNDGSRGGVGSC----CMDELKKPARKPALLACVGAVIAAVLAVRLSGVCSARMPTDLSPIPVPFKVAVGKHKGSSTHHIRLQGDGNVVVARGPKPLLTA-GAAAAGDAGATLWQSGPLPSLTQQQQRSPGKPGDNGKDKSGGXXXXSCKKCQVKVTKEGTLALTRGREELAVFSPA 340
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHX2_ECTSI8.160e-3239.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:665656..673235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.239.1mRNA_D-herbacea_F_contig100.239.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig100 665615..673326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig100.239.1 ID=prot_D-herbacea_F_contig100.239.1|Name=mRNA_D-herbacea_F_contig100.239.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=258bp
MVDLYVNDSTHKVGKRIPLLRRNANGAQVPAGSIVVDFLFVEGQEPQRGV
EDLGDHPSIASISSTTASSTGNGTTDNVPPASNRGVRAAYFWPVMRQLGG
PYRKPTLLSAVTMVIGVIAMRLLMLEPPPPPDLIPIRVPFKIYAGKYKGS
NTHHIRLQDDGNVVVAMGRKPPSSSWGSRGTAATDVILWESGPLERSVEG
SGDPRSAKKAVCRKCQLVVDKDGNLVLLRAKESLASFSPSTVRYMDKFLA
LRGKADG*
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