mRNA_D-herbacea_F_contig100.237.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig100.237.1
Unique NamemRNA_D-herbacea_F_contig100.237.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Match: D7FHX1_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX1_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 1.350e-74
Identity = 134/230 (58.26%), Postives = 160/230 (69.57%), Query Frame = 2 
Query:   56 MGKHDLHDASMAGNLEMVKKILASSPGKINDRGPKNRTPLHCAAKGNNTAVASYLISCDADTEARTAXXXXXXXXXXXXXXXXXXRLLLETVKDLAIDALDFGSWTALHYACNYDRGDTAAILIDHGASLSKRSAELQLVAMHLAARSGNLRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAGAVPDAPDEAGITPAQLTKRDDIAMELEKAIANFAEK 745
            MG+ DLHDA MAG++E VK IL ++P K+N RGPKNR+PLHCAAKG++                   XXXXXXXXXX        R LL+ VKDL I+ALDFGSWT+LHYACNY+RG+ A +LID GASL+K+SAELQLVA+HLAARSGNL TVE+L+KNGCN +QRN+FY TPL                     PDAPDEAGITPAQLTKRDDI+  LE+A+    E+
Sbjct:    1 MGRFDLHDACMAGDVEKVKSILEATPDKVNARGPKNRSPLHCAAKGDSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFYGSAAVIRYLLDEVKDLDINALDFGSWTSLHYACNYNRGECADLLIDSGASLTKKSAELQLVALHLAARSGNLATVEKLIKNGCNASQRNLFYTTPLXXXXXXXXXXXXXXXXXXXXSPDAPDEAGITPAQLTKRDDISQTLEEAVKAAVER 230
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BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Match: A0A8J9UWK9_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UWK9_BRAAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.700e-13
Identity = 57/190 (30.00%), Postives = 95/190 (50.00%), Query Frame = 2 
Query:   71 LHDASMAGNLEMVKKILASSPGKINDRGPKNRTPLHCAAKGNNTAVASYLISCDADTEARTAXXXXXXXXXXXXXXXXXXRLLLETVKDLAIDALDFGSWTALHYACNYDRGDTAAILIDHGASLSKRSAELQLVAMHLAARSGNLRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAGA 640
            LHDA+  GN+E            I+ +     +PL  A   N+T  A +LI+  AD   R++                    +L + K   IDA D    + L +A N +  +TA  LI+ GA+++ R ++ +++A+H+AA +GN+  V  LV NG +++ ++I   +PL  A + +H E  +FLI  GA
Sbjct: 2895 LHDAAATGNVEXXXXXXXXXXX-IDAQDINEFSPLMFAVNKNHTETAKFLINHGADVNLRSSKYNATALHDAAATGNVEIAKVLLS-KKADIDAQDINGNSPLMFAVNKNHTETAEFLINQGANVNLRGSKDKIMALHVAAATGNVEIVNVLVSNGADIDAQDINGKSPLIYAVRKNHTETAKFLINKGA 3082
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BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Match: A0A1V4JW37_PATFA (Ankyrin repeat domain-containing protein 16 isoform A n=1 Tax=Patagioenas fasciata monilis TaxID=372326 RepID=A0A1V4JW37_PATFA)

HSP 1 Score: 74.7 bits (182), Expect = 3.400e-11
Identity = 74/220 (33.64%), Postives = 111/220 (50.45%), Query Frame = 2 
Query:   59 GKHDLHDASMAGNLEMVKKILASSPGKINDRGPKNRTPLHCAAK-GNNTAVASYLISCDADTEARTAXXXXXXXXXXXXXXXXXXRLLLETVKDLAIDALDFGSWTALHYACNYDRGDTAAILIDH-GASLSKRSAELQLVAMHLAARSGNLRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAGAVPDAPDEAGITPAQLTKRDDIAME 712
            G +  H AS  G+ ++++ +L  SP   +      RTPLH AA  G   AV   L  C    ++R     XXXXXXXXXXXXXXX       +     A+D     ALH A    + +    LI   G  +++R+ ++QL A+H AA+ G+  T++ L+  G +V+ ++    + LH AC     +  R L+ AG + DAPD  G    QL ++ D+  E
Sbjct:   29 GWNCFHIASREGHPQVLRYLLDVSPSCWDTESTIKRTPLHTAAMHGCVDAVELLLERCQYKPDSRDKCGVXXXXXXXXXXXXXXXXXXXXXXQ-ACCTAMDALGAQALHRAAVTAQDEAIRFLISELGVDVNERATDVQLTALHYAAKEGHTHTIQTLLSLGADVHAKDGKNRSALHAACAGQQADAARILLRAG-LEDAPDGTGTLARQLARKPDVIQE 246
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BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Match: UPI001651AA94 (ankyrin repeat domain-containing protein n=1 Tax=Wolbachia pipientis TaxID=955 RepID=UPI001651AA94)

HSP 1 Score: 75.5 bits (184), Expect = 4.530e-11
Identity = 50/136 (36.76%), Postives = 70/136 (51.47%), Query Frame = 2 
Query:  368 WTALHYACNYDRGDTAAILIDHGAS---------------LSKRSAELQLVAMHLAARSGNLRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAGAVP-DAPDEAGITPAQLTKRDDIAMELEKAI 727
            +T L++A          IL+D+GA                L K+ AE    ++HLAAR G LR VE L++ G NVN +N    TPLHLA QN H E+V  LI    +  +A D  G TP  L + ++I   L++A+
Sbjct:  332 FTPLYWAAKNKHFSIVEILLDNGAHIDNGDYSRDRGVLDLLRKKEAEYCKSSLHLAARLGKLRAVEDLLEKGANVNAQNDRKDTPLHLAVQNGHTEIVSALIKVEGIDINAKDRDGNTPLDLARTEEIKTLLKEAV 467
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BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Match: A0A3Q3T2A0_9TELE (Ankyrin repeat domain 16 n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A3Q3T2A0_9TELE)

HSP 1 Score: 74.3 bits (181), Expect = 5.800e-11
Identity = 58/211 (27.49%), Postives = 94/211 (44.55%), Query Frame = 2 
Query:   92 GNLEMVKKILASSPGKINDRGPKNRTPLHCAAK-GNNTAVASYLISCDADTEARTAXXXXXXXXXXXXXXXXXXRLLLETVKDLAIDALDFGSWTALHYACNYDRGDTAAILI-DHGASLSKRSAELQLVAMHLAARSGNLRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAGAVPDAPDEAGITPAQLTKRDDIAMELE 718
            G+  +V+ +L  +P          RTPLH AA  G +  V   L  C    ++R +                  R LLE  +   I A D     ++H      + +    L+ D    +++R+ E+QL A+H AA+ G+  T++ LV+ G ++  R+    T LH+AC   H E  R L+  G + D+ D +G T   L K+ D+    E
Sbjct:  156 GDPLVVQHLLLVAPDVCRTESKTRRTPLHTAAMHGCDEVVRILLDRCGYTPDSRDSCGVTPFMDAVRNGHISVARQLLEKHQASPI-ATDLLGAQSVHQVAVTGQEEALQFLVWDLSVDVNQRATEIQLTALHYAAKEGHTSTIKSLVELGADLYVRDKKGRTALHMACIGQHAEAARTLLQLG-LKDSEDASGTTARHLAKKPDVVRVFE 364
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BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Match: W2S116_9EURO (HET domain-containing protein n=1 Tax=Cyphellophora europaea CBS 101466 TaxID=1220924 RepID=W2S116_9EURO)

HSP 1 Score: 75.1 bits (183), Expect = 6.040e-11
Identity = 67/216 (31.02%), Postives = 96/216 (44.44%), Query Frame = 2 
Query:  146 DRGPKNRTPLHCAAKGNNTAVASYLISCDADTEARTAXXXXXXXXXXXXXXXXXXRLLLETVKDLAIDALDFGSWTALHYACNYDRGDTAAILID-------HGASLSKRSAELQLVAMHLAARSGNLRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAGAVPDAPDEAGITPAQLTKR-----DDIAMELEKAIANFA-EKQWR 754
            D   + +TPLHCAA+  N  +   L++  AD EA                     RL +E    +     D    TA   A  Y+R DT A +         H  S + RSA+ +   ++ AA SG +  V   + +G +V+ R+    T LH A  N+H+EV+  L AAGA  +A D    TP +L ++     DD+A  LE      A EK WR
Sbjct:  105 DSTSQEKTPLHCAAEAGNLGLVRSLLAKGADPEAVDKFGDFPLHYAAFNGHTDVVRLFVEA--GVRTSHRDHWGRTAFACALEYNRLDTVAYMYQNLLPSQLHSFSTTDRSADTES-PVYEAAASGYIDVVREHLHHGRDVDLRDDHGRTLLHHAILNNHVEVIELLRAAGADENALDRDKTTPRELMRKVGRKSDDVAELLELGRRRLAQEKLWR 317
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BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Match: A0A1V4JW63_PATFA (Ankyrin repeat domain-containing protein 16 isoform B n=1 Tax=Patagioenas fasciata monilis TaxID=372326 RepID=A0A1V4JW63_PATFA)

HSP 1 Score: 73.6 bits (179), Expect = 1.420e-10
Identity = 73/217 (33.64%), Postives = 110/217 (50.69%), Query Frame = 2 
Query:   59 GKHDLHDASMAGNLEMVKKILASSPGKINDRGPKNRTPLHCAAK-GNNTAVASYLISCDADTEARTAXXXXXXXXXXXXXXXXXXRLLLETVKDLAIDALDFGSWTALHYACNYDRGDTAAILIDH-GASLSKRSAELQLVAMHLAARSGNLRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAGAVPDAPDEAGITPAQLTKRDDI 703
            G +  H AS  G+ ++++ +L  SP   +      RTPLH AA  G   AV   L  C    ++R     XXXXXXXXXXXXXXX       +     A+D     ALH A    + +    LI   G  +++R+ ++QL A+H AA+ G+  T++ L+  G +V+ ++    + LH AC     +  R L+ AG + DAPD  G    QL ++ D+
Sbjct:   29 GWNCFHIASREGHPQVLRYLLDVSPSCWDTESTIKRTPLHTAAMHGCVDAVELLLERCQYKPDSRDKCGVXXXXXXXXXXXXXXXXXXXXXXQ-ACCTAMDALGAQALHRAAVTAQDEAIRFLISELGVDVNERATDVQLTALHYAAKEGHTHTIQTLLSLGADVHAKDGKNRSALHAACAGQQADAARILLRAG-LEDAPDGTGTLARQLARKPDV 243
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BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Match: A0A2I0LXB1_COLLI (Ankyrin repeat domain 16 n=6 Tax=Columbidae TaxID=8930 RepID=A0A2I0LXB1_COLLI)

HSP 1 Score: 72.0 bits (175), Expect = 3.190e-10
Identity = 71/217 (32.72%), Postives = 107/217 (49.31%), Query Frame = 2 
Query:   59 GKHDLHDASMAGNLEMVKKILASSPGKINDRGPKNRTPLHCAAK-GNNTAVASYLISCDADTEARTAXXXXXXXXXXXXXXXXXXRLLLETVKDLAIDALDFGSWTALHYACNYDRGDTAAILI-DHGASLSKRSAELQLVAMHLAARSGNLRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAGAVPDAPDEAGITPAQLTKRDDI 703
            G +  H AS  G+ ++++ +L  SP   +      RTPLH AA  G   AV   L  C    ++R     XXXXXXXXXXXXXXX                 G+  ALH A    + +    L+ + G  +++R+ ++QL A+H AA+ G+  T++ L+  G +V   ++     LH AC     +  R L+ AG + DAPD  G    QL ++ D+
Sbjct:  141 GWNCFHIASREGHPQVLRYLLDVSPSCWDTESTIKRTPLHTAAMHGCVDAVELLLERCQYKPDSRDKCGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGA-QALHRAAVTAQDEAIRFLVSEQGVDVNERATDVQLTALHYAAKEGHTHTIQTLLSLGADVRAGDVPGWAALHAACAGQQADAARILLRAG-LEDAPDGTGTLARQLARKPDV 355
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BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Match: A0A3Q1GZA5_ANATE (Ankyrin repeat domain 16 n=5 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1GZA5_ANATE)

HSP 1 Score: 70.9 bits (172), Expect = 7.340e-10
Identity = 53/197 (26.90%), Postives = 89/197 (45.18%), Query Frame = 2 
Query:  116 ILASSPGKINDRGPKNRTPLHCAAKGNNTAVASYLISCDADTEARTAXXXXXXXXXXXXXXXXXXRLLLETVKDLAIDALDFGSWTALHYACNYDRGDTAAILI-DHGASLSKRSAELQLVAMHLAARSGNLRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAGAVPDAPDEAGITPAQLTKRDDI 703
            +L  +PG         RTPLH A  G  T   +    C    +   +                  RLLL+  +     A   GS   +H      + +    L+ D G  +++R+ ++QL A+H AA+ G+  T++ L++ G +++ R+    T LH+AC   H E VR L+  G + D+ D +G T  QL ++ D+
Sbjct:  155 LLLVAPGVWRTESKTGRTPLHTA--GEATVPFTLKRICGYPPDGTDSCGVTPLMDAVRNGHISVARLLLDKHQASPTAADILGS-QPVHQVAVTGQDEALRFLVQDLGVDVNQRATDIQLTALHYAAKEGHTSTIKSLLELGADLHVRDNKGRTALHMACIGQHAEAVRMLLRLG-LKDSEDASGATAQQLARKPDV 347
[Close]
BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Match: UPI001EAFF8CA (ankyrin repeat domain-containing protein 17-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFF8CA)

HSP 1 Score: 70.1 bits (170), Expect = 9.050e-10
Identity = 52/189 (27.51%), Postives = 80/189 (42.33%), Query Frame = 2 
Query:   71 LHDASMAGNLEMVKKILASSPGKINDRGPKNRTPLHCAAKGNNTAVASYLISCDADTEARTAXXXXXXXXXXXXXXXXXXRLLLETVKDLAIDALDFGSWTALHYACNYDRGDTAAILIDHGASLSKRSAELQLVAMHLAARSGNLRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAG 637
            LH A   GN+E+VK +L+     IN RG +  TP+  AA   +  V   L+S  AD                                   +  LD G  T LH+AC     +    ++  G          ++  + LAA  G+   VE LV  G +V+  +  + T LHLAC+  ++EVV+F+++ G
Sbjct:   48 LHLACKGGNVEVVKFVLSLGMLSINSRGWREMTPVMLAADKGHKEVVELLVSKGAD-----------------------------------VSLLDKGHGTLLHFACRGGNVELVKFVLSLGMLSINSRGWKKMTPVMLAADKGHKEVVELLVSKGADVSLLDKGHDTLLHLACKGGNVEVVKFVLSLG 201
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHX1_ECTSI1.350e-7458.26Ankyrin repeat domain protein n=2 Tax=Ectocarpus T... [more]
A0A8J9UWK9_BRAAE1.700e-1330.00Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
A0A1V4JW37_PATFA3.400e-1133.64Ankyrin repeat domain-containing protein 16 isofor... [more]
UPI001651AA944.530e-1136.76ankyrin repeat domain-containing protein n=1 Tax=W... [more]
A0A3Q3T2A0_9TELE5.800e-1127.49Ankyrin repeat domain 16 n=1 Tax=Mastacembelus arm... [more]
W2S116_9EURO6.040e-1131.02HET domain-containing protein n=1 Tax=Cyphellophor... [more]
A0A1V4JW63_PATFA1.420e-1033.64Ankyrin repeat domain-containing protein 16 isofor... [more]
A0A2I0LXB1_COLLI3.190e-1032.72Ankyrin repeat domain 16 n=6 Tax=Columbidae TaxID=... [more]
A0A3Q1GZA5_ANATE7.340e-1026.90Ankyrin repeat domain 16 n=5 Tax=Anabas testudineu... [more]
UPI001EAFF8CA9.050e-1027.51ankyrin repeat domain-containing protein 17-like n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:650687..659151 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score242.3
Seed ortholog evalue2.4e-61
Seed eggNOG ortholog2880.D7FHX1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionAnkyrin-repeat protein
Ec32 orthologEc-12_006210.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1175
Cds size726
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.237.1prot_D-herbacea_F_contig100.237.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig100 651081..659096 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927416.081126-UTR-D-herbacea_F_contig100:650686..6510801622927416.081126-UTR-D-herbacea_F_contig100:650686..651080Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 650687..651080 -
1690790159.1385288-UTR-D-herbacea_F_contig100:650686..6510801690790159.1385288-UTR-D-herbacea_F_contig100:650686..651080Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 650687..651080 -
1622927416.1606088-UTR-D-herbacea_F_contig100:659096..6591511622927416.1606088-UTR-D-herbacea_F_contig100:659096..659151Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 659097..659151 -
1690790159.206458-UTR-D-herbacea_F_contig100:659096..6591511690790159.206458-UTR-D-herbacea_F_contig100:659096..659151Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 659097..659151 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927416.0929325-CDS-D-herbacea_F_contig100:651080..6513731622927416.0929325-CDS-D-herbacea_F_contig100:651080..651373Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 651081..651373 -
1690790159.1486948-CDS-D-herbacea_F_contig100:651080..6513731690790159.1486948-CDS-D-herbacea_F_contig100:651080..651373Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 651081..651373 -
1622927416.10741-CDS-D-herbacea_F_contig100:652296..6524161622927416.10741-CDS-D-herbacea_F_contig100:652296..652416Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 652297..652416 -
1690790159.156287-CDS-D-herbacea_F_contig100:652296..6524161690790159.156287-CDS-D-herbacea_F_contig100:652296..652416Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 652297..652416 -
1622927416.1165884-CDS-D-herbacea_F_contig100:652799..6529761622927416.1165884-CDS-D-herbacea_F_contig100:652799..652976Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 652800..652976 -
1690790159.1634822-CDS-D-herbacea_F_contig100:652799..6529761690790159.1634822-CDS-D-herbacea_F_contig100:652799..652976Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 652800..652976 -
1622927416.1255212-CDS-D-herbacea_F_contig100:653381..6534091622927416.1255212-CDS-D-herbacea_F_contig100:653381..653409Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 653382..653409 -
1690790159.1743088-CDS-D-herbacea_F_contig100:653381..6534091690790159.1743088-CDS-D-herbacea_F_contig100:653381..653409Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 653382..653409 -
1622927416.135546-CDS-D-herbacea_F_contig100:655473..6555781622927416.135546-CDS-D-herbacea_F_contig100:655473..655578Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 655474..655578 -
1690790159.1814044-CDS-D-herbacea_F_contig100:655473..6555781690790159.1814044-CDS-D-herbacea_F_contig100:655473..655578Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 655474..655578 -
1622927416.1498888-CDS-D-herbacea_F_contig100:659093..6590961622927416.1498888-CDS-D-herbacea_F_contig100:659093..659096Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 659094..659096 -
1690790159.1954765-CDS-D-herbacea_F_contig100:659093..6590961690790159.1954765-CDS-D-herbacea_F_contig100:659093..659096Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 659094..659096 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig100.237.1

>prot_D-herbacea_F_contig100.237.1 ID=prot_D-herbacea_F_contig100.237.1|Name=mRNA_D-herbacea_F_contig100.237.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=242bp
MGKHDLHDASMAGNLEMVKKILASSPGKINDRGPKNRTPLHCAAKGNNTA
VASYLISCDADTEARTAYKMTPLHVAAFYGSTDVARLLLETVKDLAIDAL
DFGSWTALHYACNYDRGDTAAILIDHGASLSKRSAELQLVAMHLAARSGN
LRTVERLVKNGCNVNQRNIFYITPLHLACQNDHLEVVRFLIAAGAVPDAP
DEAGITPAQLTKRDDIAMELEKAIANFAEKQWRRPPPPPAA*
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mRNA from alignment at D-herbacea_F_contig100:650687..659151-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig100.237.1 ID=mRNA_D-herbacea_F_contig100.237.1|Name=mRNA_D-herbacea_F_contig100.237.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=8465bp|location=Sequence derived from alignment at D-herbacea_F_contig100:650687..659151- (Desmarestia herbacea DmunF female)
GCCACTTCACCTCCTCTCTATCCTCTCTCTGCGTATCAACTGGTGCTGGG
TTGGCATGGTGAGTCGTGACGAATGAAGCGCTTATCCTGGGAGTACGCAT
GGTCCATGTGACTAGCATCGTGTGAGCCAGTGTTTATCCAATCGCCACTA
AATGTAGGCCATCTTGAATCAATTGCTTCTAGCCGAAAAGCTCCGTTGTG
TACTTACTACGTACTCGTACACTCGTACTGTTGTTGTCGAACAACATTGC
AGTACTCGCACGTATCGTATACATACGAGAACTCGTAGTACATTGTAGTA
CGAGTACTACTGTTGTACTCCTACAACAGTAGTAGTAGTAGTAGTAGTAG
TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTATTAGTAGTAGTAGTA
GTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTACAAGTAGTAAATTA
GTAGTGCAACAACAACAATTTTAGTATGTTCGTACTACTCGGTACTACTA
CGAGTACTACTGTCTGTGGTTGTAGGTTGTGGAGCTCTACAAGGTTTCTG
CGGCTGACGCCGCAACGCTCAAAGAATGAGAGCGAATCGCCAAGGCTAAA
GGACATACCCATGGATTGATATGATACATTGTGTGGAGATTGGAGAGGAA
CGGAAGGAGGAGCAAAAATAAAAGCGAAGCACAAAACGCTACGTACATCC
CGCAGTATAGTCTATATCTACAACAAACAGCATAAAATCATCACTAATTT
ATTGGAGAAAATGTTGGGGAGTCCAAAACGCTGTGTGTACAACAACAAAA
AAACAAATTACACGACAGACAGTACAGTAGTAACTGCGAAGCTCAAAGCC
AACAACCACTTCACCAAAAACAACAGTATACGCAGCACATGCACAGGCCA
CGCGTTTCAGACATGTAGAGGAGAGGAGACAGTGCTGTCTAGAGGCAAGC
TAGAAGGTGGTTCAGACAACAGTGCAACAACAGCATGAGTATCACACCAG
ATCTGGAAAAATAGCCTTTGCAATTAATTGCATGTACTAAAAAGCAGTAA
TTGGTATATCGTGGATGGTGCTGTGGTCCCAGTTGATGGGGCTCTCGGAA
ATTAAGGCAGGCGGCCAAGATCGGCCAGTTCGTTCATGTATATTATATTA
TTATATTATTGTCGCACCACGAAGAGAAGTCGGAATAACACACAACAAAT
AAGCACTGATCAGCAGGGCGTGTGCCCACACCAACACGAAACAGGGGCCC
ACCATGGATGGTGTTACCCAGAACTTCAATGCCAAATTCCCACACGAAAC
CCCCCCTACATCCCGCAATGTCCCGCCAGATCTCCGCACCAAATCTCCGT
ATAACCATTACTGCTGTCACAAGGATAGTGATGTCATGAGCATATATTTC
AAGCAGTATGCCCAAGTGGGACAAGAACGAACTTAACTATCCAAAAAAAG
GGTAAAGTAAAATATCAAAATAGGCGCGAGCTCCAAACGCAACAATAGTA
GCACTACAGACAAACGAAGCAACGCACCGCAACCAATTGCAAAGCGAAAG
ACGAGATAATCGAGGTAATGCTGGGGATAAAGCAAATGGAAAGCGGACAA
CTGAATTGTGCCACAGTTAGTTGTACACCAGATAGACAGTATATTTAGTC
TATAGAGATCGCTTCTACTGTAGTAGGACAACCAAACAAACAAATATTAT
TGCAGAAGCTCAAGACGCAACAACAACAGGAACGTCACCAAAAACAATCG
TATAGCGCGGGCACCGGCCATGAGCTTCAGGCATGTCGAGGAGAGAATAG
GAGAGGAGAGCTGGCTGGTGTGGCTATCGCAGAGCATAGAGTGCTGGTCA
ACCGCTACGACTCGTATATCACGCAGCAGCACAGATCACAGATTTGCAAT
TAATTTGTTAAGTTGTACTAAAAAGAACACCAAAACACTATCGTACAGTG
AGTGTAGCAGTCAATTGCAAATTATTTGCAGATCGTGTAACATACCGAGA
AATCAATAATTGTAATCGTACGACGGTGTGCCGTGGGCCAGTGGCACGAC
AATGCTGCGTTTTGGTGCGTCGGGACGGTGAGCTCTGCGGCAAAACATAA
TGGTTTAAAGATGTACGGTGGTACTACCACTACTGTAGTATTGAAGCTCC
AGTAGTACAAGAGGGTATCATACAGAGAGATATTCGTATTAGACTATTAT
TTTTAGGGTAATGGCCTAAAACGGGTGCACCCGTTCGCTTTCTCGCCAAA
AAACGGGTACATGCGTCCATTTTGTGGCCAAAAACGGATCACCTCTTGCC
TCGTCTGTTTTTGGCCACGACGTACCTGTTTTTGGCCACAACGCGGCAAC
ATGTACCTGTTTTTTGGCCGCGATGCAGACGCATGTACCCGTTTTTGGCC
AGAACATGGCGCCATCTGTTTTGCCTGTTCGTGGCCGCGAGGTGGACGTA
TGTCTCTGCTTTGAGGCGAAAAGTGGCACCGTCTATACGTGACTGGAACC
TGGAGTTATTCAGATATACTTCGAAGATTGAATTATCACCACAACTGGTA
ACTTTGAGACGTTTGTGACGTTATTCATGAAATCATTTTGTCATCGGTAG
CCATCAAGAAGAAGCGTTCGCTAAACGCGGTGCGTATAGCATCTTCGTCG
CGTGGGAAATATTGATCCAACATCGAGGTGGATTGCAGCGGAAGGCCACC
CATCTGCTGGCATCGTCATGATGTTTGTGTCGTGTTGTAGAATGTGTACT
TCGTATATTTATGTAGGAGGAGGTAGGTAGAGATCACTGCACAGTGCGAA
CATGACGTAGGTAGGTGTGTTGGGTGTGGGGTGGGTGGTGGGTTCGTGTC
GGATGGATGATTTCTCTCTGTGGTATCGTGTGTTTCGCGCGCGCTCTGCC
AGCGTGGTATCTGATTGGCTGAAAGTTGGGAAAAGTTGGCCAAAATCGGA
TCAATGTCGCCAAAAACAGTTGATTGTTGATTGTCAAGCAGAGTAGACGA
TAAGAGGTGTAACTGGCCATTTTCCCGCCAAAACCGGTACGATTCAGCGT
TGGCCAATCAAAGGATTCCTGGCCTGTGTGTTTTCCTTGTTTCTGGCTAC
CCGTTTTTGGCCAGAAAGTGGTCGGGTGTACCAGTTTTTGGCTATTGCCC
TTATTTTTACGTACAAGAACATCAGTTGTGACGTTCCAAACTGGTTCGGG
GGCCAGGGGGATAATCGTCAACCTCACTGTGTGATACATCGGTCGCGCGG
AATCTGTCGGCCCTCAGATAAGGTATCTATTATCGTGGGGTAGGTCTGTC
TACGAGTATCATCTATCTGTCTATTATTGTAACATTTACATGTTAGTACA
ACGGTAGTGAGTAGTTAGTAGTAATGTAGTCGACTGCTTGTTTACGTTTT
CCAACAAATGGTATTATACAACAACAGTAAGTGCAACACAACAGTCGTAC
TACTGCTGTGCAGCACAAAACGCTTCGGGTTCCTCCCGGCCTCTCTTGTG
TGCATGATGATGTGTGATGATGATATGGTATATTGGTGCGGTGCGGTGGT
GTGGCTTGTTTTCTTTGACGCAGGGAAAGCACGACCTGCACGATGCTTCC
ATGGCTGGCAACCTCGAGATGGTGAAGAAAATTCTCGCTTCTTCCCCAGG
AAAAATCAATGATCGAGGCCCGAAGAACGTGAGTTTTTTTTTTTTTCTGT
ACGACGGCGTACTCGAAGTTTTTGGTTTTGACCCGCGAAGAATGGTATCA
TACGTACCACCATAGAGCTGTCTATAAAGTCAAAGCAGTATTAATAGGAC
AGACCACAATTCGATGAAAGTCTACGAGGGAAGAAAGTGCTGCAGTCTTC
TCGCGATAAAAATGTAGGCACGTACCGTAGTGGGAAGGCGGGAGGAGCGC
CTACTATGTGACCCTGGATCTGAGTTACGAAGAGAGATTGAGCTAGAGAA
AGAATAGAGCGAAGATAGTAAATGGGACGGGAAAAAAAAAAAAAATGTTA
GGTAGGACAACAGCTGACCCTCGTCGGACAAGTACAAGTCAGCGCTGACT
TGTAGGACAAGGGTTGACTGTCTTACTTGACAAAAGTTATTCGCGGGGCA
CAAGACTAAAGGCACTTATTCTTGGGGGGGCGCGACTCCCCTCGCCAGCG
CAGTTCTCTCATCGTAGACTTCTTCATCTTCGACTGTTGTTGAGAAAATA
TCCAAGATTTATTGTTTTGCCGGGTCTCGAACCCGTAATCCTTAAGTAGG
ACAGTTAACCCTTGTTCCTACAAGTCAGACTTGTAGAGCGAACAATAAAT
TTTGTTAACCTACTCGTAACTCGTAGGACAATATATTTGGTTAAGTGGGA
CGTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTGACAAGGGA
CAGAAGGGTAAGCGTGCTGTGATTACTAACAACGGGATCGGGTAAAATAT
TTTCGAGCGGAGAGCAAAAAAATATTTTTTTTCCTTCTCGAGCCCTCAAG
CAAACCTACAACTAACAGTAGAATATCATATTCCCAGAAGAGTATCTCTC
GTCGGGACATCACTTTAAACTTCCCAGTCCTGCTCACGGGAGCTCTTCTA
CTCTTCGCCCAGCGCGCCTGTGTGAGCAAGCCGTGGTCTGGACACAGGTG
CCTTCCCTTCTCCTCCTCGGTGTACATGCCAACCATTGTTTTTATCGCGC
ACAGGGTTCGGGCATTCTCATGCTAATCGTAGCTCGTCGACTTTTTTTTA
TCGAACTACTGCAAGGTGTAATTATTATTATGTCATTGTGATATCATAAG
CAGGCAGTTTATTTGAACGTTATTATGTTGTTCGAGGTATAGTATTGGAG
CTGCCAGTGCGCCGCTACTCGTCCTGCGGGTGGATGGCTCTCTCTTGGGG
TGGCATGAATTGCCTTGCTCTGTTGTTGTTGTTGTATGCCGAGTAAAAAC
CAGGTACCAAGGTGCAAGACAACAGTAGTAGTACGAGGACAAGTTTCTTT
GGCCGTTTAGTTTTTTTTTTTAAGCGTTGGCGCTATACAGGCGTACGTGC
TTATACACCACAGCGTAGTCCTCTCGCAGAGTGAGTGAGTGGGTTTGACA
CACAATGTCACCAACGATTGCCGAGTGCCGAGTTTATCTCTCTGGGTGGC
TGCCTCCAGTGCCTGATACCCCTACGAGCGCAGGAGGGCGTCCGACGTAC
CCACGCTGTAGCTAACGCCCACATTGTGTTCCACGACAAGGGTTACATCG
GCAATCAGATGCGGCTATTATATAGCTGCGGAAGTGGTGGGAGAGCTGGA
GCTTTCCTTTTACTGCTTTTACATGCTAACGCATCCGCCAGAAGGATAAG
GAAAATGGAAAGGGGAAAATGGCCCGCATACGCGGCCCTTGTTTCATGTG
ACAATTTCAACCAATATTATTGGTATTTTCAACGAACGTTGTGTTGTATG
ATAGCAGCTTTTCAATGCAAGTAGTCTACGCAAGTAACGTCGCCTTTTTT
GTTTCCTTCCGTTCGTCCGTCCGTCTGTCGATATTCATCCGTTCGTCTGT
CCATCCGTCCATCCGTTCGTCCGTCTGTCCGTTTGTGCCATTTTACCCTT
TTTCCTTTTTCGGGACCTATCCTTCCTCTGCGCTTGCCTGCCTCGCGGGT
TTTTTCCTCCCTGTACTGTGTTGTACTACCTGGGAATTGCAGCGCACGCC
CCTGCATTGTGCCGCGAAGGGTAAGAGGACGACGACAAGCAGCAGGCATG
TAGTTGGGGTGGGCCACACAGAAAACAAGAATATTTAGTATGTACGAGTA
TTGTAAGCACACCTGGTGTTTCAGGAGGAGTAGGAACATAAAAGTTGAAC
GCGATGGTGTTTTCAGTTTTTAGTCACCAAAATTTTGTTATCCCTCGCAG
CCCGCCGTCGTAGGGTGAGTGAGCCCATGTGTTTTGCCTTACCTAAGTCT
TGGTCATATTATAGTACTGTACTACTTAGTAGCAGTTATAGTTTTTTCTT
CGTGTGTCTGGACGCACATATTTTTTCTTACTCTTTTCCCAATACGGTAC
CTGTACTACTCGATCGAATGAATGTGTTTTTCTATATCAAGACCTAACAA
TGATAGTGTTTTTTATACCTGGCAGGCAACAACACCGCGGTGGCCTCGTA
CCTGATATCTTGCGACGCTGACACGGAGGCCCGCACGGCGTACAAGATGA
CTCCCCTGCACGTTGCCGCCTTCTACGGGAGCACCGACGTGGCCAGACTG
TTGCTGGAGACGGTGAAGGACCTCGCCATAGACGCGTTGGACTTCGGGTC
ATGTGAGAGAGGCTGCCGTGGGCACACATTACGAAGGGTCACAGAAAGGA
TTTTCGGGGGGGGTTTTACTCACTATTGTAGTAGGGTGTGGTTGTGGGTT
AGAGTACAGATTACAAAATGATGGAAGGGGCCTTTCGGGACGTTTATCCT
TACTATTTGTTCTAAATTCTAAACCTCCCAACAAACAAAACTGGTTGGGC
TCCGCCTCGTTCTTGTATTTTGTTTGTGTATGTGTGTGTGTTGGCTGTGG
TTGTAACTCATACCTGGAAGTACTGTAGTATTAATTGTAGGCATTGGCTC
AACAGCTGCCTGTCTCACAACTTGTTTTTATTATTGTTTTTTTGTTCGTT
TTCTTTTACCGATTTTTGTTGTGTTTGTTTTGCAGGGACCGCCCTCCACT
ACGCCTGCAACTATGACAGGGGCGACACGGCGGCCATTCTTATCGATCAC
GGCGCGAGCTTGAGCAAGCGGAGCGCGGAGCTGCAGCTCGTTGCCATGCA
CCTCGGTGAGCAAAGGCCAAATAAGGCTTCGTTATACATCATGATATAGA
TCGATTCGCACGCCTTGATTGCTGCTGTCCCCCAAGGCCAACGGCCTCCG
ACATACACGCGCTGAAATGGCAACGTAGTGATGTACAATGGTTGATAGGG
GTTTAGTCGGCAATGGCTAATCATGATGCGTCTACCAAAAGCCGAGGCAG
GTTGTGGAGCGTAAGGTTTTATTTTTTTATTTTTTACCCATCCATCGGAG
AATAACAATGGTTGAAACAAAATATATATGTCGCGGTTGATACTTATAGT
GATGATGGTTTTGATTGTGATTATTATCACGTTATTTTATTATTGTTCAT
ACCTGTGATATGAGCCCCAGCCCTTGGTCGCAAGACTTGCTCGGCGTTCT
CGGAAGGGAAAATATACATTTAAAGGTAGTTCGTGATGATGCTTTTGACT
CTTTAGCATCTACAACGGTGTACTGTACTGTGCGGCTTCACATGCGTATA
TCTTTTCTGCACATCAACGCACCAAAGACAACAACAAATTATCGTAAATA
GTTGTCTTGCCATACGATGCGGCAGGCAAGAGCCGAGAAGCCGTTGCCGC
CGCCGCCGTCGTACGGTAAGTTCGATCGGCCGAGCGAAGCGATTTTGTGC
GGCACCCCCGTGTGGTCACCCAAAAACAGAAGGTTGTGCAAAAGCGCGTC
GCGTCCCGGCGTCGGCGGCTTGTCTCATATTGTTGCTGCTTGCTTGCTTG
GGAGAAACTATGATACTGCCTGGACGTAGGTCGGTTTGTATCGATAGTAA
GGGCAAGCTGTAGCCCCTCCCACCTCCGCCCCCCCCCCCACTCCCCTGTC
TCATTTAGGCATGCAAAACTTGAGTATCTTACCCCCCCCCCCTTCCAACC
GCCGCCTGCCCGGTCCTGCCGAGCCCAGCCGCCCGCTCAGGGAATCTGCG
CACAGTAGAGCGGCTTGTCAAGAATGGCTGCAACGTCAACCAACGTAACA
TCTTCTACATTACTCCGCTACACCTGGCTTGTCAAAACGATCACCTCGAG
GTAGTGCGTTTCCTGATCGCTGCCGGGGCTGTCCCTGATGCCCCGGACGA
GGCCGGCATTACACCCGCCCAGCTCACGAAGCGCGACGACATCGCCATGG
AGCTTGAGAAGGCGATAGCGAATTTCGCGGAGAAGCAATGGCGGCGCCCC
CCGCCACCGCCTGCGGCGTAATTTTGTTTTTCAGAGTGTTTTTTTTTCTT
CTAAGCCTACGTAGCCAGGCGTGTAGAGTGAGTGTGGCCAGACAGCTATC
ACAGGGGGCCTCCGCAGTTTTCGCTTTTAACGCTACTACTATTATACTGT
ACTGCTGCTGTTGCATGCTCCGTTTTTTTCTGTTTGCTTCTTTTTGCATG
AAAATGGAACTACAGTAGTGGTGTGGAGAAAATGTTTGTGTTTTTCGAGA
GCCTGGGGGGCTGGAAGGGCAGGGTAGACGTTGGTAAACAAGTTATATAC
TGTAGGGGTTTGTCAATCTGAAGGGCGTGTGATTGCGTATTTATGCGTAA
TTGCGGATCATTGCTTCTGGTTTTTGTAGGTATGTCATATCGGGATTTGT
TAAGTAGGGTGGGCG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig100:650687..659151-

>mRNA_D-herbacea_F_contig100.237.1 ID=mRNA_D-herbacea_F_contig100.237.1|Name=mRNA_D-herbacea_F_contig100.237.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1452bp|location=Sequence derived from alignment at D-herbacea_F_contig100:650687..659151- (Desmarestia herbacea DmunF female)
ATGATGGGAAAGCACGACCTGCACGATGCTTCCATGGCTGGCAACCTCGA
GATGGTGAAGAAAATTCTCGCTTCTTCCCCAGGAAAAATCAATGATCGAG
GCCCGAAGAACGGAAAGCACGACCTGCACGATGCTTCCATGGCTGGCAAC
CTCGAGATGGTGAAGAAAATTCTCGCTTCTTCCCCAGGAAAAATCAATGA
TCGAGGCCCGAAGAACCGCACGCCCCTGCATTGTGCCGCGAAGGCGCACG
CCCCTGCATTGTGCCGCGAAGGGCAACAACACCGCGGTGGCCTCGTACCT
GATATCTTGCGACGCTGACACGGAGGCCCGCACGGCGTACAAGATGACTC
CCCTGCACGTTGCCGCCTTCTACGGGAGCACCGACGTGGCCAGACTGTTG
CTGGAGACGGTGAAGGACCTCGCCATAGACGCGTTGGACTTCGGGTCATG
CAACAACACCGCGGTGGCCTCGTACCTGATATCTTGCGACGCTGACACGG
AGGCCCGCACGGCGTACAAGATGACTCCCCTGCACGTTGCCGCCTTCTAC
GGGAGCACCGACGTGGCCAGACTGTTGCTGGAGACGGTGAAGGACCTCGC
CATAGACGCGTTGGACTTCGGGTCATGGACCGCCCTCCACTACGCCTGCA
ACTATGACAGGGGCGACACGGCGGCCATTCTTATCGATCACGGCGCGAGC
TTGAGCAAGCGGAGCGCGGAGCTGCAGCTCGTTGCCATGCACCTCGGGAC
CGCCCTCCACTACGCCTGCAACTATGACAGGGGCGACACGGCGGCCATTC
TTATCGATCACGGCGCGAGCTTGAGCAAGCGGAGCGCGGAGCTGCAGCTC
GTTGCCATGCACCTCGCCGCCCGCTCAGGGAATCTGCGCACAGTAGAGCG
GCTTGTCAAGAATGGCTGCAACGTCAACCAACGTAACATCTTCTACATTA
CTCCGCTACACCTGGCTTGTCAAAACGATCACCTCGAGGTAGTGCGTTTC
CTGATCGCTGCCGGGGCTGTCCCTGATGCCCCGGACGAGGCCGGCATTAC
ACCCGCCCAGCTCACGAAGCGCGACGACATCGCCATGGAGCTTGAGAAGG
CGATAGCGAATTTCGCGGAGAAGCAATGGCGGCGCCCCCCGCCACCGCCT
GCGGCGTAACCGCCCGCTCAGGGAATCTGCGCACAGTAGAGCGGCTTGTC
AAGAATGGCTGCAACGTCAACCAACGTAACATCTTCTACATTACTCCGCT
ACACCTGGCTTGTCAAAACGATCACCTCGAGGTAGTGCGTTTCCTGATCG
CTGCCGGGGCTGTCCCTGATGCCCCGGACGAGGCCGGCATTACACCCGCC
CAGCTCACGAAGCGCGACGACATCGCCATGGAGCTTGAGAAGGCGATAGC
GAATTTCGCGGAGAAGCAATGGCGGCGCCCCCCGCCACCGCCTGCGGCGT
AA
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