mRNA_D-herbacea_F_contig10.142.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Match: D7G0Q8_ECTSI (Hypothetical UPF0043 protein slr0305 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Q8_ECTSI) HSP 1 Score: 602 bits (1551), Expect = 3.910e-209 Identity = 324/464 (69.83%), Postives = 368/464 (79.31%), Query Frame = 2
Query: 266 TRHARGYRSSPTRLRLNPSPDTLEQLRQANLKAHNEVWESRRNMARATLSAAQTWQHAREKVSGPPDAQQKGSVVADSKSALAVXXXXXXXXXXXXRIGGRAALVSALGLDFAQDIGVKDNLESFLAFFDGLGPIRYGYFLGGWVIAKTFCLDFLSIVLGLGSGIVFGGVLQGALVSTTCATIASGLGFQLARTKLRSQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGATSLPLPIFLAGMFVGSLKPYLLDSYLGVFGKSMVDGNAGSDGDLALVGTFFVVILVGTFASQVAGRTWEELNAEAQKSTVATATSSTDVGISEPSTSNDSA---DGLEWLDLWGIERSSLPSWLTSWQAKEEVVRNKMRNVVKQEWVYMRDRKEAMDKGEG----QLIPKESKLPPPGGPVLDESGRFFDVGAYVTESTVFPFVLMESFWKYSDATL 1636
T H R + +N + E+LRQANLKAH EVW+SRR+M RATLSAA+ + ARE ++G A S+V D K +L + R+GGRAALVSALGLDF +D G+K+N+ESFLAFFDGLGP+RY YFLGGWV+AKTFC+DFLSIVL LGSG+VFGGVLQGALVST CATIASGLGFQLART LR+QVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYG TSLPLP+FL+GM VGSLKPYLLDSYLGVFGK MVDG AG GDLALVGTFFVV+LVGTFASQVA RTWEELNAEA+KS A ++T G PS S + DGLEWLDLWGIERSSLP W T+W+AK+ VR+K+R VVKQE YM R+ A +GEG +L PKES LPPPG P+LDESGRFFD+GAYV+ESTVFPFVL+ESFW+YS+ L
Sbjct: 38 TPHHRPIAPHRPNMNMNQPAEVPEKLRQANLKAHIEVWDSRRDMTRATLSAAKALRGARESIAGEDVATD--SLVEDGKGSLVISAIALAVAAATLRLGGRAALVSALGLDFGEDTGIKENVESFLAFFDGLGPVRYAYFLGGWVVAKTFCVDFLSIVLALGSGVVFGGVLQGALVSTACATIASGLGFQLARTTLRTQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGTTSLPLPVFLSGMAVGSLKPYLLDSYLGVFGKQMVDGEAGVGGDLALVGTFFVVVLVGTFASQVASRTWEELNAEAEKSMPTAAETNTPPG-GVPSASQEGGGGGDGLEWLDLWGIERSSLPDWFTTWKAKDNAVRSKIRGVVKQEREYMEGREAA--EGEGVDGAELPPKESGLPPPGPPLLDESGRFFDLGAYVSESTVFPFVLIESFWEYSNPKL 496
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Match: A0A836CC84_9STRA (Hypothetical UPF0043 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC84_9STRA) HSP 1 Score: 317 bits (811), Expect = 5.830e-99 Identity = 194/430 (45.12%), Postives = 248/430 (57.67%), Query Frame = 2
Query: 365 HNEVWESRRNMARATLSAAQTWQHAREKVSGPPDAQQKGSVVADSKSALAVXXXXXXXXXXXXRIGGRAALVSALGLDFAQDIGVKDNLESFLAFFDGLGPIRYGYFLGGWVIAKTFCLDFLSIVLGLGSGIVFGGVLQGALVSTTCATIASGLGFQLARTKLRSQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGATSLPLPIFLAGMFVGSLKPYLLDSYLGVFGKSMVDGNAGSD--GDLALVGTFFVVILVGTFASQVAGRTWEELNAEAQKSTVATATSSTDVGISEPSTSNDSADGLEWLDLWGIERSSLPSWLTSWQAKEEVVRNKMRNVVKQEWVYM-RDRKEAMDKGEGQLIPKESKLPPPGGPVLDESGRFFDVGAYVTESTVFPFVLMESFWKYSDATLTVE 1645
H ++W SRR M R L A+ R K G G A +K+A+ + RIGGRAAL+S LGLDF D G+K +L+ L F G +Y F GW+ +KT C DFLS++L L SGI+FGGV++GA S CAT+AS +GFQLART+LR +V EQ+EKRPALRA+E+ VS+ GFKTV+TLRLAP+LPIPLGAYNYVYG TSL L F AG F+GS+KPYLLDSYLGVFGKS+VDG D L+GTF V +L+GT AS++AGRTW+EL+AEA SS+ G + + A L W ++ GI R LP + W K + VV++EW + R+R L GG D+G Y+ ES F L + +YSD E
Sbjct: 8 HVKIWSSRRTMIRGALYTARAAAAVRGKFGGDGSPDSTG---AAAKNAVLLTAFAVAAGAATIRIGGRAALLSVLGLDFMADSGIKGSLDGGLDFVQNAGVYKYLLFAAGWLASKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLARTQLRDRVIEQVEKRPALRAVERAVSKGGFKTVLTLRLAPLLPIPLGAYNYVYGVTSLSLGEFTAGTFLGSIKPYLLDSYLGVFGKSLVDGXXXXXXXNDAVLLGTFAVAVLIGTLASELAGRTWDELSAEA---------SSSGGGDGDAA-----AAPLRWNEMMGIARDELPPPVRQWDDKTSAAEGLIWGVVQEEWERLQRNRSGXXXXXXXXXXXXXXXLTAAGG---------VDMGVYIAESWAFNGALFRALGEYSDPAKAPE 411
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Match: A0A7S1T2A1_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T2A1_9CHLO) HSP 1 Score: 260 bits (665), Expect = 3.500e-77 Identity = 138/247 (55.87%), Postives = 172/247 (69.64%), Query Frame = 2
Query: 494 DSKSALAVXXXXXXXXXXXXRIGGRAALVSALGLDFAQDIGVKDNLESFLAFFDGLGPI-RYGYFLGGWVIAKTFCLDFLSIVLGLGSGIVFGGVLQGALVSTTCATIASGLGFQLARTKLRSQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGA-TSLPLPIFLAGMFVGSLKPYLLDSYLGVFGKSMVDGNAGSDGDLALVGTFFVVILVGTFASQVAGRTWEELNAE 1228
D+ A+A R+GGRAAL+S GLDF +D G++D ++ +A+ DGLGP + F G W + K CLD L +VL + SG++FGGV QG L S TCATI S F L RT LR +V ++EKR ALRA+E+ VS +GF+TV+TLRLAPVLPIPLG Y+YVYGA TSL LP FLAG V SLKPY LD+YLG+F KS+VDG G D D L+ TF VV+L+GT ASQ+A RTWEE+ AE
Sbjct: 36 DAVGAVATTAFAVAVGATVLRVGGRAALLSVAGLDFIRDTGLRDQVDQAVAYADGLGPYGKVAVFAGAWCVTKIACLDALGVVLAISSGVLFGGVWQGGLASATCATIGSAAAFGLGRTVLRERVAPEVEKRAALRAVERAVSTDGFRTVLTLRLAPVLPIPLGMYSYVYGASTSLALPEFLAGTLVASLKPYTLDAYLGIFAKSVVDGEPG-DNDAVLLATFAVVVLIGTLASQIATRTWEEVQAE 281
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Match: A0A7S2E6P5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6P5_9STRA) HSP 1 Score: 252 bits (644), Expect = 2.170e-72 Identity = 172/467 (36.83%), Postives = 250/467 (53.53%), Query Frame = 2
Query: 260 QHTRHARGYRSSPTRLRLNPSPDTLEQLRQANLKAHNEVWESRRNMARATLSAAQTWQHAREKVSGPPDAQQKGSVV-ADSKSALAVXXXXXXXXXXXXRIGGRAALVSALGLDFA-QDIGVKDNLESFLAFFDGLGPIRYG-YFLGGWVIAKTFCLDFLSIVLGLGSGIVFGGVLQGALVSTTCATIASGLGFQLAR--TKLRSQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGATSLPLPIFLAGMFVGSLKPYLLDSYLGVFGKSMVDGNAGS-DGDLALVGTFFVVILVGTFASQVAGRTWEELNAEAQKSTVATATSSTDVGISEPSTSNDSADGLEWLD--LWGIERSSLPSWLTSWQAKEEVVRNKMRNVVKQEW---VYMRDRKEAMDKGEGQLIPKESKLPPPGGPVLDESGRFFDVGAYVTESTVFPFVLMESFWKYSD 1627
QH +H S +LR + E+L++ ++ +V SRR + R TL A++ ++ R P+ + G + +DSK+AL + R+GGRAA VS LGLDFA ++ +KDNL+S LA+ L PI G F+ W K FC D IVL L SGI+FGGV+QGA+ S ATI S + F LA+ T +R + E +E+ P+LR +EK V+ +G K ++TLRLAP+LPIPLG YNYVYG T++P F G+F+GSLKPYLLDSYLG FGK++VDG A S D+ L+ +L+G FASQ+AG TWE + E + + +A+G D +W I LP W+ +Q + +M ++ E+ V+ E + + +++ P L + FD GA + V VL +F KY++
Sbjct: 42 QHYKHGE---DSHVKLRAMTEEEE-EELKKVQEESRLKVLASRRKLIRGTLKNAESLRNFRINNGFVPELDENGKPLKSDSKAALTLTAFVIAAGAVLLRVGGRAAFVSTLGLDFATENPELKDNLDSLLAYASTLNPITEGALFIAAWTFVKVFCFDAGGIVLALSSGILFGGVIQGAVFSAAAATIGSSVAFGLAKMETPIREKALELVEEYPSLRGIEKTVANDGLKAILTLRLAPILPIPLGMYNYVYGVTNVPYLDFAGGIFLGSLKPYLLDSYLGYFGKTVVDGTAASATEDVVLLVALGASVLIGVFASQLAGETWESVQEE----------------VEAEKRAKKAAEGQSKDDNVVWSIMDMELPKWVVGFQYALQDATERMNTMIDVEYKAAVWNYTTAEEIPRNVNPACCEDA-------PELVLANSGFDFGASTCDGLVLSPVLFGAFLKYAN 481
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Match: A0A448ZP55_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZP55_9STRA) HSP 1 Score: 248 bits (633), Expect = 7.980e-71 Identity = 171/462 (37.01%), Postives = 246/462 (53.25%), Query Frame = 2
Query: 284 YRSSPTRLRLNPSPDTLEQLRQANLKAHNEVWESRRNMARATLSAAQTWQHAREKVSGPPDAQQKGSVV-ADSKSALAVXXXXXXXXXXXXRIGGRAALVSALGLDFAQDIG-VKDNLESFLAFFDGLGPI-RYGYFLGGWVIAKTFCLDFLSIVLGLGSGIVFGGVLQGALVSTTCATIASGLGFQLAR--TKLRSQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGATSLPLPIFLAGMFVGSLKPYLLDSYLGVFGKSMVDGNAGSDG--DLALVGTFFVVILVGTFASQVAGRTWEELNAEAQKSTVATATSSTDVGISEPSTSNDSADGLEWLDLWGIERSSLPSWLTSWQAKEEVVRNKMRNVVKQE-----WVYMRDRKEAMDKGEGQLIP--KESKLPPPGGPVLDESGRFFDVGAYVTESTVFPFVLMESFWKYSD 1627
YRSSP LR+ + EQ+ +A L+ +W +RR R+ L A++ ++ R P+ + G+ AD K+A+ + R+GGRAALVSA+GLDF D +++ + L + + + P+ + G F GW KT C D IVL SGI+FGGVLQGA++S ATI S + F LA+ T +R + E +E+ P+LR LEKVV++EG K V+T RLAPVLPIPLG YNYVYG T++ F G+F+GSLKPY LDSYLG GKS+VDG+A G D L+G + +L+G FASQ+A TWE + E + + + E ++ DG+ +++G E LP W+ +Q + +M +V QE W D + + +P K L P P + + D GA + V +L F K D
Sbjct: 35 YRSSPP-LRVYNDDEEREQIEEARLR----IWNNRRGEVRSMLKGAESLRNFRLANGFTPELDEDGNPTKADGKTAVTLTAFAVAAGAIVLRVGGRAALVSAVGLDFVNDNPEMQEQINQVLQYAESVDPVLKTGLFWLGWTFVKTLCFDAGGIVLAFASGILFGGVLQGAIMSALGATIGSSVAFALAKADTPVREKAIEIVEENPSLRGLEKVVADEGLKAVLTFRLAPVLPIPLGMYNYVYGITNVRFVDFAGGIFLGSLKPYFLDSYLGYVGKSLVDGSASEGGLQDYVLIGVLGLSVLIGVFASQLASETWEAIQKEEEAE-------DRENKLKETGGEDEDDDGVT-TEVFGFE---LPQWMVGFQYGLQDADERMNRLVLQEYDAKVWNCTEDSSFFGIEVSKKNLPDNKNPALVDPASPEITDRYEGVDFGATTCDGLVLSPILFSYFLKIQD 480
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Match: B8CC46_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC46_THAPS) HSP 1 Score: 245 bits (626), Expect = 1.940e-70 Identity = 165/453 (36.42%), Postives = 248/453 (54.75%), Query Frame = 2
Query: 320 SPDTLEQLRQANLKAHNEVWESRRNMARATLSAAQTWQHAREKVSGPP--DAQQKGSVVADSKSALAVXXXXXXXXXXXXRIGGRAALVSALGLDFA-QDIGVKDNLESFLAFFDGLGP-IRYGYFLGGWVIAKTFCLDFLSIVLGLGSGIVFGGVLQGALVSTTCATIASGLGFQLAR--TKLRSQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGATSLPLPIFLAGMFVGSLKPYLLDSYLGVFGKSMVDGNAGSDG---DLALVGTFFVVILVGTFASQVAGRTWEELNAEAQKSTVATATSSTDVGISEPSTSNDSADGLEWLDLWGIERSSLPSWLTSWQAKEEVVRNKMRNVVKQE-----WVYMRDRKEAMDKGEGQLIPKESKLPP---PGGPVLDESGRFFDVGAYVTESTVFPFVLMESFWKYSD 1627
S + +L++ ++ +V RR R L AA++ ++ R + P D + +DSKSA+A+ RIGGRAALVSALGLDFA ++ +++ L S L + D +G F+ W K FC D +VL L SGI+FGGV QGA+VS AT+ S + F +A+ T +R + E +++ P+LR +EKVV+++G K ++TLRLAPVLPIPLG YNYVYG T++P F G+F+GSLKPYLLDSYLGVFGK +VDG AG G D L+ V +L+G FASQ+A TWE +N E ++ A + + G D DG+ + G++ +P W+ +Q + ++ +++ E W Y + E+ P + + P P P + + FD GA + + V L+ ++ +Y+D
Sbjct: 2 SEEDEAELKRVQEESRMKVLTDRRKSIRGILKAAESSKNFRLQNGYVPELDPDTGKPISSDSKSAVAITAFVVAAGAVALRIGGRAALVSALGLDFATENPELREGLNSVLQYADTVGTETELALFILAWTAVKVFCFDAGGVVLALASGILFGGVWQGAVVSAFAATVGSSIAFGMAKLDTPVRKKALEVVDEYPSLRGIEKVVAKDGLKAILTLRLAPVLPIPLGIYNYVYGVTNVPYLDFAGGIFLGSLKPYLLDSYLGVFGKQIVDGTAGEVGSLQDALLLVALGVSVLIGVFASQLANETWESINEEVEREKAEKAAAEGEGG------EIDDYDGIT-REFMGMD---VPKWIIGFQLALQAADKRVNTMIEDEYHAKVWNYTAEELES---------PSSTVINPATQPDSPEVVNANTGFDFGASICDGLVLSPALLGAYLRYAD 435
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Match: A0A7S2R0Q0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0Q0_9STRA) HSP 1 Score: 246 bits (628), Expect = 3.370e-70 Identity = 171/445 (38.43%), Postives = 248/445 (55.73%), Query Frame = 2
Query: 335 EQLRQANLKAHNEVWESRRNMARATLSAAQTWQHAREKVSGPPDAQQKGSVV-ADSKSALAVXXXXXXXXXXXXRIGGRAALVSALGLDFAQDIG-VKDNLESFLAFFDGLGPI-RYGYFLGGWVIAKTFCLDFLSIVLGLGSGIVFGGVLQGALVSTTCATIASGLGFQLAR--TKLRSQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGATSLPLPIFLAGMFVGSLKPYLLDSYLGVFGKSMVDGNAGSDG---DLALVGTFFVVILVGTFASQVAGRTWEELNAEA-QKSTVATATSSTDVGISEPSTSNDSADGLEWLDLWGIERSSLPSWLTSWQA--KEEVVR-NKMRNVVKQE--WVYMRDRKEAMDKGEGQLIPKESKLPPPGGPVLDESGRFFDVGAYVTESTVFPFVLMESFWKYSD 1627
E+LR+ ++ +V +RR+ R L A++ ++ R + P+ + G + +DSK A+ + RIGGRAALVSA+GLDFA D +K+ L++FL + L PI G F+ W K FCLDF ++L L SGI+FGGVLQGA S ATI S + F LA+ T LR + + +++ P+LR +EKVV+++G K ++TLRLAP++PIPLG YNYVYG T++P F G+F+GSLKPYLLDSYLG FGK ++DG+ + D+ L+ +L+G FASQ+A TWE + E Q+ A + DV D DG+ ++ G++ LP W+ +Q KE +R N+ +V Q W Y +DK QL P P P + ++ FDV AY + L +F Y+D
Sbjct: 39 EELRRVEEESRLKVLAARRDSIRGMLKGAESLRNYRLENGFVPELNEDGDAIQSDSKFAVTLTAFVVAAGAVTLRIGGRAALVSAVGLDFANDNPQLKEGLDTFLTYAQSLDPITEAGIFVLAWTAVKVFCLDFGGVILALSSGILFGGVLQGAAFSALSATIGSSVAFGLAKLDTPLRKKALDVMDENPSLRGIEKVVAQDGLKAILTLRLAPIIPIPLGMYNYVYGVTNVPYFDFAGGIFLGSLKPYLLDSYLGYFGKQVIDGSLAGESSTQDIILLAALGFSVLIGVFASQLASETWESVKKEIDQEELEKLAQAEGDVDGD-----GDEKDGVV-REIGGMD---LPQWVVGFQLSLKESEIRINEYIDVEYQAGVWNYT-----DVDKVPSQLDPARY----PNAPEIVDAQTGFDVTAYFCDGLQLSPCLFAAFLTYAD 465
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Match: A0A7S4AYN3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AYN3_9STRA) HSP 1 Score: 243 bits (619), Expect = 1.950e-68 Identity = 172/474 (36.29%), Postives = 249/474 (52.53%), Query Frame = 2
Query: 260 QHTRHARGYRSSPTRLRLNPSPDTLEQLRQANLKAHNEVWESRRNMARATLSAAQTWQHAREKVSGPPDAQQKGSVV-ADSKSALAVXXXXXXXXXXXXRIGGRAALVSALGLDFAQDIG-VKDNLESFLAFFDGLGP-IRYGYFLGGWVIAKTFCLDFLSIVLGLGSGIVFGGVLQGALVSTTCATIASGLGFQLAR--TKLRSQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGATSLPLPIFLAGMFVGSLKPYLLDSYLGVFGKSMVDGNAGSDG--DLALVGTFFVVILVGTFASQVAGRTWEELNAEAQKSTVATATSSTDVGISEPSTSNDSADGLEWLDLWGIERSSLPSWLTSWQAKEEVVRNKMRNVVKQEWVYMRDRKEAMDKGEGQLIPKE---SKLPP--------PGGPVLDESGRFFDVGAYVTESTVFPFVLMESFWKYSD 1627
QH + R SP+ L++ + EQ+ +A ++ +W +RR R+ L A++ ++ R P+ + G+ D K+A+ + R+GGRAALVSA+GLDF D ++D + L + + + P ++ G F GW KTFC D I+L SGI+FGGVLQGAL+S ATI S + F LA+ T +R + E +E+ P+LR LEKVV+EEG K V+T RLAPVLPIPLG YNYVYG T++ F G+F+GSLKPY LDSYLG GKS++DG+A G D L+G +L+G FASQ+A TW+ + E + + ++ ++ ++ DG+ +++G E LP W+ +Q + +M +V QE+ D K E L E LP P P + E D GA + V VL F K D
Sbjct: 46 QHQQSFRRISHSPSPLKVYNDEEEKEQIEEARIR----IWNNRRGEIRSMLKGAESVRNFRFANGFVPELDEDGNPSKTDGKTAVTLTAFAVAAGAIVLRVGGRAALVSAVGLDFVNDNPEMQDQINQVLQYAETVDPFLKTGLFWLGWTFVKTFCFDAGGIILAFSSGILFGGVLQGALMSALGATIGSSVAFLLAKADTPVREKAIEIVEENPSLRGLEKVVAEEGLKAVLTFRLAPVLPIPLGMYNYVYGITNVRFVDFAGGIFLGSLKPYFLDSYLGYVGKSLLDGSASEGGLQDYVLIGVLGFSVLIGVFASQLASETWDAIQKEQEAE-------DRENKLNRMASGDEDDDGVT-TEIFGFE---LPQWVVGFQYGLQDADKRMNTLVLQEF----DAKVWNCTEESSLFGIELSKKNLPDHRNPALVDPTSPEITERYEGVDFGATTCDGLVLSPVLFSYFLKLQD 500
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Match: K0R0H6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0H6_THAOC) HSP 1 Score: 240 bits (612), Expect = 7.990e-68 Identity = 182/518 (35.14%), Postives = 264/518 (50.97%), Query Frame = 2
Query: 116 RNIFLC---FLLPTSSCHAFSGVARTELRRAKHRITSFTTTIXXXXXXXPPQHTRHARG--YRSSPTRLRLNPSPDTLEQL-RQANLKAHNEVWESRRNMARATLSAAQTWQHAREKVSGPP--DAQQKGSVVADSKSALAVXXXXXXXXXXXXRIGGRAALVSALGLDFA-QDIGVKDNLESFLAFFDGLGPIRYGY-FLGGWVIAKTFCLDFLSIVLGLGSGIVFGGVLQGALVSTTCATIASGLGFQLAR--TKLRSQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGATSLPLPIFLAGMFVGSLKPYLLDSYLGVFGKSMVDGNAGSDG--DLALVGTFFVVILVGTFASQVAGRTWEELNAEAQKSTVATATSSTDVGISEPSTSNDSADGLEWLDLWGIERSSLPSWLTSWQAKEEVVRNKMRNVVKQEWVYMRDRKEAMDKGEGQLIPKESKLPPPGGPVLDESGRFFDVGAYVTESTVFPFVLMESFWKYSD 1627
R I C LLP S FS A R A P TR R + + R L +P+ E+L +A LK V+ RR R L A++ ++ R P D + + +D KSA+ + R+GGRAALVSALGLDFA ++ +KD LES L + + +G + F+ W + K FC D +VL L SGI+FGGV+QGA+VS AT+ S F LA+ T +R + + +E+ P+LR +EKVV+++G K ++TLRLAPVLPIP+G YNYVYG T++P F G+F+GSLKPYLLDSYLGVFGK +VDG G D L+ V +L+G FASQ+A TW+ +N E + E S S D +G + G+ LP ++ +Q + ++ ++++E M + E + PK P VL E+ + F++GA + L++++ KY+D
Sbjct: 8 RRIVSCALLILLPLRSVECFSSTAVRSGRSAA--------------LSQPTLKTRDVRSPEFNNRNVRTALASTPEEEERLVEEARLK----VFSDRRRTIRWVLKNAESTKNYRIANDLVPELDPETGKPIKSDGKSAVTITAFVVAGGAVLLRLGGRAALVSALGLDFASENPELKDGLESVLGYANTMGTESELFLFILAWTVVKVFCFDAGGVVLALASGILFGGVIQGAVVSAFAATVGSSAAFGLAKIDTPVRKKALDLVEEYPSLRGIEKVVAKDGLKAILTLRLAPVLPIPIGLYNYVYGVTNVPYLQFAGGIFLGSLKPYLLDSYLGVFGKQIVDGTTQDGGLQDFLLLVALGVSVLIGVFASQLAEETWDSINEEVEAKKA------------EISESEDDEEGGVMTEFMGV---GLPQFIVKFQQALQAADERVNKLIEEE---MEAKVWNCTMAELEENPKNPAKQPDSIEVL-EANQGFNIGADICNGLCLSPALLKAYLKYAD 488
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Match: A0A8J9SGT0_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SGT0_PHATR) HSP 1 Score: 229 bits (583), Expect = 8.410e-66 Identity = 134/290 (46.21%), Postives = 179/290 (61.72%), Query Frame = 2
Query: 371 EVWESRRNMARATLSAAQTWQHAREKVSGPPDAQQKGSVV-ADSKSALAVXXXXXXXXXXXXRIGGRAALVSALGLDFA-QDIGVKDNLESFLAFFDGLGPI-RYGYFLGGWVIAKTFCLDFLSIVLGLGSGIVFGGVLQGALVSTTCATIASGLGFQLAR--TKLRSQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLPIPLGAYNYVYGATSLPLPIFLAGMFVGSLKPYLLDSYLGVFGKSMVDGNAGSDG--DLALVGTFFVVILVGTFASQVAGRTWEEL 1219
+VW+SRRN R TL +A + R + P+ G + +D K AL + RIGGRAALVS LGLDF ++ +K NL+ L D + P+ + F W K C D + L L SGI+FGGVLQGA+VS AT S + F LA+ T LR + L++ P+LR +EKVV++EGFK ++TLRLAP+LPIP+GAYNY+Y T++PL F G+F+GSLKPYLLDSYLG FGKS+VDG A +G D L+ +L+G FASQ+A TW+ +
Sbjct: 78 QVWKSRRNQIRQTLKSADQVRIFRLQQGWVPELGDDGKPLKSDGKVALTLTAFVIAAGAIALRIGGRAALVSTLGLDFVTENPELKANLDIVLNTADSMDPVTKLLLFTASWTAVKVLCFDAAGVALALSSGILFGGVLQGAVVSAAAATFGSTVAFGLAKLDTPLRKKGLGLLDEYPSLRGIEKVVAKEGFKAILTLRLAPLLPIPIGAYNYIYSITNVPLLDFCGGIFIGSLKPYLLDSYLGYFGKSLVDGTADQNGWQDTLLLAALGFSVLIGVFASQLASETWDSV 367 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig10.142.1 >prot_D-herbacea_F_contig10.142.1 ID=prot_D-herbacea_F_contig10.142.1|Name=mRNA_D-herbacea_F_contig10.142.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=543bp MFARNIFLCFLLPTSSCHAFSGVARTELRRAKHRITSFTTTITTTTRTTPback to top mRNA from alignment at D-herbacea_F_contig10:579260..591272- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig10.142.1 ID=mRNA_D-herbacea_F_contig10.142.1|Name=mRNA_D-herbacea_F_contig10.142.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=12013bp|location=Sequence derived from alignment at D-herbacea_F_contig10:579260..591272- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig10:579260..591272- >mRNA_D-herbacea_F_contig10.142.1 ID=mRNA_D-herbacea_F_contig10.142.1|Name=mRNA_D-herbacea_F_contig10.142.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=3258bp|location=Sequence derived from alignment at D-herbacea_F_contig10:579260..591272- (Desmarestia herbacea DmunF female)back to top |