mRNA_D-herbacea_F_contig1152.1154.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1152.1154.1
Unique NamemRNA_D-herbacea_F_contig1152.1154.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Match: A0A2D9I236_9PROT (Glycosyltransferase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9I236_9PROT)

HSP 1 Score: 520 bits (1339), Expect = 5.070e-186
Identity = 249/274 (90.88%), Postives = 263/274 (95.99%), Query Frame = 1
Query:    1 MKSPTPKSPGSMPVAYHIGSDGAPLQAPFDAAIVIPTLLRPSLAQALRSIFAQQNVGRIHILVGVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTRHGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDKITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLNERDKGYAKRLEWIAQQSNKNAGTQ 822
            MKSPT K+ G MP+AYHIG DGAPLQ+PFDAAIVIPTLLRPSLA+ALRSIFAQ+N+GR+HIL+GVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTRHGG+HAA DGGALRTILSYMANSRYVAYLDDDNWLAPDH+EKLL AIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCL LDKI CLAVLGLWSVPM GDDT LSADR+VFAALVQH+RGGPTHTPTVFYRLNE DKGY+KRLEWIA+QSNKNAGTQ
Sbjct:    1 MKSPTAKAIGRMPIAYHIGGDGAPLQSPFDAAIVIPTLLRPSLARALRSIFAQENIGRLHILIGVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTRHGGVHAAWDGGALRTILSYMANSRYVAYLDDDNWLAPDHVEKLLKAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLXLDKIACLAVLGLWSVPMKGDDTNLSADRQVFAALVQHFRGGPTHTPTVFYRLNELDKGYSKRLEWIARQSNKNAGTQ 274          
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Match: A0A7Y0DZH2_9PROT (Glycosyltransferase family 2 protein n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0DZH2_9PROT)

HSP 1 Score: 278 bits (710), Expect = 2.770e-90
Identity = 139/255 (54.51%), Postives = 173/255 (67.84%), Query Frame = 1
Query:   37 PVAYHIGSDGAPLQAPFDAAIVIPTLLRPSLAQALRSIFAQQNVGRIHILVGVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTRHGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDKITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLNERDKGYAKRLEWIAQQS 801
            P A HIG  GA L+ PFD A+VIPT+LRP+LAQA++S+FAQ   GRIHIL+GVD+++     ++     QP +CV T+++ GYSTS RHGG+H A DGGALRT+LSY+ANSRYVAYLDDDNW  P HL  L TAI G D+A++LR YVDP T  P C+DR ESVGP  G Y     GFVDPNCLM+DKI C  VL  W+ P+  D      DR VF  L Q YR G +   TV YR+   D  +  R +WI +++
Sbjct:   19 PAAVHIGHAGAVLRDPFDMAVVIPTILRPTLAQAVQSVFAQDFQGRIHILIGVDQSDAPRTLLSQAVAGQPAHCVVTVLDPGYSTSKRHGGMHPAHDGGALRTVLSYLANSRYVAYLDDDNWWDPAHLSSLRTAIDGQDWAFSLRRYVDPETGSPHCIDRWESVGPGRGVYNTHCGGFVDPNCLMIDKIACEPVLRFWAHPL-ADLPTPEPDRSVFHQLSQEYRWGESGQATVRYRIRPGDVAHGHRRDWIFEET 272          
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Match: A0A142XEL4_9BACT (Uncharacterized protein n=1 Tax=Gemmata sp. SH-PL17 TaxID=1630693 RepID=A0A142XEL4_9BACT)

HSP 1 Score: 273 bits (699), Expect = 6.650e-89
Identity = 134/237 (56.54%), Postives = 165/237 (69.62%), Query Frame = 1
Query:   82 PFDAAIVIPTLLRPSLAQALRSIFAQQNVGRIHILVGVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTRHGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDKITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLNERDKGYAKRLEWIA 792
            PFD A+VIPTLLR +L +A+RS++AQ   G I +LVGVD   GD   ++ +    P +C  T+ + GYSTS RHGG+H +GDGGALRTILSY A+SR V YLDDDNW  P+HL  L  A +G  +AY+LRW+VD AT +PLCVDR ESVGPDAG Y+D   G+VDPNCL++DK  C  VL LWSVP+ GD   L+ DR VFA L     GG T   TVFY L+  D  Y +RLEW+A
Sbjct:   18 PFDVAVVIPTLLRATLDRAVRSVYAQTFPGTIQVLVGVDVRRGDPGVLDALAACAPGHCALTVFDPGYSTSARHGGVHPSGDGGALRTILSYAAHSRLVTYLDDDNWWGPEHLGTLARAAEGRGWAYSLRWFVDRATGRPLCVDRWESVGPDAGCYRDRFGGWVDPNCLLIDKSVCEPVLRLWSVPLPGDKLRLTGDRHVFADLRTRGPGGATGRATVFYTLSPEDVMYPQRLEWVA 254          
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Match: A0A2E6QP25_9PROT (Glycosyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QP25_9PROT)

HSP 1 Score: 257 bits (656), Expect = 3.340e-82
Identity = 126/250 (50.40%), Postives = 165/250 (66.00%), Query Frame = 1
Query:   40 VAYHIGSDGAPLQAPFDAAIVIPTLLRPSLAQALRSIFAQQNVGRIHILVGVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTRHGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDKITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLNERDKGYAKRLEWI 789
            V+ H    G  LQ  FDAA+V+P+LLRP++  ALRS++AQ   G I IL+G+D    D   + P   E+P +CV T+V+LGYSTS R GG+H    GGALRTILSYMANSRY+AYLDDDNW   +HL  L  AI+G D+A++LRW+ D  T +PLC+D  ESVGP AG +     G+VDPNCLM++K  C AVL  WS+P+  D   ++ DR+VF ALV  +R   T   T +YR+   D  + KR+  I
Sbjct:    7 VSRHYAEPGFDLQRVFDAAVVMPSLLRPTIGAALRSVYAQAFSGTIQILIGIDDPAADRTVLQPALAERPPHCVVTVVDLGYSTSERRGGVHKDYSGGALRTILSYMANSRYLAYLDDDNWWHREHLASLRAAIRGADWAWSLRWFADAETGQPLCIDEWESVGPAAGVFAKRFGGWVDPNCLMINKGACEAVLAAWSLPLTVDQ--MTGDRQVFRALVNRFRPAATGRATTYYRMGFHDPNHEKRMTAI 254          
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Match: A0A023D0V1_ACIMT (Uncharacterized protein n=1 Tax=Acidomonas methanolica NBRC 104435 TaxID=1231351 RepID=A0A023D0V1_ACIMT)

HSP 1 Score: 247 bits (631), Expect = 1.780e-78
Identity = 129/242 (53.31%), Postives = 162/242 (66.94%), Query Frame = 1
Query:   82 PFDAAIVIPTLLRPSLAQALRSIFAQQNVGRIHILVGVDRAEGDIAA----INPVFQEQPDNCVTTLVNLGYSTSTRHGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDKITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLNERDKGYAKRLEWIAQ 795
            P+D A+V+P+LLRPSL QAL SIF Q+ VGR+ IL+GVD+A  D  A    +    +  P      L+  GYSTSTRHGG+ AA DGGALR ILS+MA++  VAYLDDDNW  PDHL  L+TAI+G ++A+  RW+V P T +P+CVDR ESVGP  G + DS  GFVDPNCLM+DK     VL  W+ PM GD TF++ADR VF  L QH  GG +   +VFY L E D  +  RL  + +
Sbjct:   16 PYDVAVVMPSLLRPSLFQALVSIFRQEGVGRVQILIGVDQAPADEGAALRTVAAACRMSPPEWTVQLLWPGYSTSTRHGGVTAARDGGALRAILSFMAHAPLVAYLDDDNWWRPDHLAGLVTAIEGREWAWAXRWFVHPRTHRPVCVDRWESVGPGQGVFADSQGGFVDPNCLMIDKTRVPDVLARWTTPMPGDPTFMTADRMVFDFL-QHRPGGCSGRDSVFYVLRESDGLHPLRLRMMGE 256          
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Match: A0A1Q3V3X5_9PROT (Glycosyltransferase n=1 Tax=Rhodospirillales bacterium 69-11 TaxID=1895825 RepID=A0A1Q3V3X5_9PROT)

HSP 1 Score: 244 bits (623), Expect = 3.290e-77
Identity = 123/250 (49.20%), Postives = 163/250 (65.20%), Query Frame = 1
Query:   58 SDGAPLQAPFDAAIVIPTLLRPSLAQALRSIFAQQNVGRIHILVGVDRAEGD----IAAINPVFQEQPDNCVTTLVNLGYSTSTRHGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDKITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLNERDKGYAKRLEWIAQ 795
            +D   LQ PFDAA+V+PT LRPS+  AL S+F Q+  GR+H+LVG+DR +      +A +      +P      L   GYSTS RHGG+  A DGGALR +L+++ANS YVAYLDDDNW    HL  LL  I+G D+A++LRW+V P + +P+C+D  ESVGPDAG +KD+  GFVDPNCLMLDK  C   +  W+ P++ D T +S+DR VFAAL Q  RG  T   + +Y +N  D   A RLE + +
Sbjct:   11 ADDVSLQTPFDAAVVMPTTLRPSIYYALVSVFRQKLAGRVHVLVGIDRPDAPPPDALAPVEAACAHRPAGWALQLYWPGYSTSVRHGGLSPARDGGALRCVLTHLANSPYVAYLDDDNWWDEAHLASLLETIEGRDWAFSLRWFVHPESKRPVCIDAWESVGPDAGVFKDTFGGFVDPNCLMLDKRRCEVAVAQWNRPLSHDPTGMSSDRNVFAALRQR-RGAGTDRASAYYLVNPDDGLQAFRLEMMGE 259          
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Match: UPI00131E9583 (glycosyltransferase family 2 protein n=1 Tax=Acidisphaera sp. S103 TaxID=1747223 RepID=UPI00131E9583)

HSP 1 Score: 244 bits (622), Expect = 3.850e-77
Identity = 123/236 (52.12%), Postives = 157/236 (66.53%), Query Frame = 1
Query:   73 LQAPFDAAIVIPTLLRPSLAQALRSIFAQQNVGRIHILVGVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTRHGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDKITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLNERDKGYAKRL 780
            LQ P DAA+VIPT+LRP+LA ALR IFAQ   GRIHIL+G+D   GD+A I+ V  E+P +C   +   GYSTSTRHGG+   GDGGALR +L+Y+ANS YVAYLDDDNW    HL +L  A+   ++A+ LRW+V P T +P+CVD  ESVGP  G + +   GFVDP+CLM++K+ C      W+ P+  D   +SADR VFA L   ++   T  PTVFY LN  D  +  RL
Sbjct:   13 LQQPMDAAVVIPTVLRPTLAPALRGIFAQNFPGRIHILIGIDNIRGDLAMIDAVCAERPPHCAVQVFWPGYSTSTRHGGLTPPGDGGALRAMLTYLANSPYVAYLDDDNWWDTQHLYQLRRAMDDAEWAFALRWFVHPETRRPVCVDIWESVGPGQGIFNEHFGGFVDPSCLMINKVACPLAPHHWNFPLEKDP--MSADRNVFAFLKLRHKPRGTGQPTVFYTLNINDGLHKVRL 246          
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Match: A0A7V7E8W7_9PROT (Glycosyltransferase family 2 protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7E8W7_9PROT)

HSP 1 Score: 243 bits (620), Expect = 1.130e-76
Identity = 116/234 (49.57%), Postives = 161/234 (68.80%), Query Frame = 1
Query:   82 PFDAAIVIPTLLRPSLAQALRSIFAQQNVGRIHILVGVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTRHGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDKITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLNERDKGYAKRLE 783
            P D A+++PTLLRPSL  ALRSIF Q + GRI +LVGVDR EG++  ++   + +P N V  ++  GYSTS RHGG+  A DGG LR++L+++AN+RYVAYLDDDNW   DHL ++L  I+  D+AY LRW+V P + + +CVD  ES+GPD G +     G+VDPNCLM DK+ C +V+  W++P+ GD T L++DR VFA L   + G  T  P+V+Y L   D  + +RL+
Sbjct:    2 PADVAVIMPTLLRPSLKMALRSIFEQSHKGRIQVLVGVDRPEGEVTIVDDCCEGRPPNVVVQILYPGYSTSVRHGGLGTARDGGVLRSVLTHLANARYVAYLDDDNWWHRDHLSRMLKVIRKADWAYALRWFVHPLSKQVICVDEWESLGPDRGIFS---VGWVDPNCLMFDKLACESVIQYWNIPLPGDATQLTSDRNVFANLRARFVGATTGKPSVYYVLGPADPLHPQRLK 232          
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Match: A0A849HJV7_9PROT (Glycosyltransferase family 2 protein n=1 Tax=Acidocella sp. TaxID=50710 RepID=A0A849HJV7_9PROT)

HSP 1 Score: 242 bits (618), Expect = 1.320e-76
Identity = 124/248 (50.00%), Postives = 162/248 (65.32%), Query Frame = 1
Query:   73 LQAPFDAAIVIPTLLRPSLAQALRSIFAQQNVGRIHILVGVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTRHGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDKITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLNERDKGYAKRLEWIAQQSNKNAG 816
            LQ   DAA+VIPTLLRP L QAL SIFAQ   G I +LVG+D  EGD+AA++     +P +CV      GYSTS RHGG+    DGG LR +L+Y+ANS YVAYLDDDNW  PDHL ++  A +   +A+ LRW+V   T +P+CVD  ESVGP  G +++   GFVDPNCLM++K+ C      W++P+ GD    SADR VFA L +H++   T   TVFY LNE+D  +  R++ I   + +NAG
Sbjct:   13 LQKTMDAAVVIPTLLRPVLRQALESIFAQNFPGTIQVLVGIDVMEGDLAALDAACAARPSHCVVQAFWPGYSTSVRHGGLTPPSDGGCLRAVLTYLANSPYVAYLDDDNWWHPDHLRQMRAATEEAQWAFALRWFVHDQTRRPICVDTWESVGPGQGMFQERFGGFVDPNCLMINKLACPLAAPHWNMPLAGDTG--SADRSVFAFLTRHHQVKGTGKATVFYELNEKDGLHPMRVK-IMGSAYENAG 257          
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Match: A0A8J2YUH2_9PROT (Uncharacterized protein n=1 Tax=Aliidongia dinghuensis TaxID=1867774 RepID=A0A8J2YUH2_9PROT)

HSP 1 Score: 244 bits (624), Expect = 5.080e-75
Identity = 122/247 (49.39%), Postives = 165/247 (66.80%), Query Frame = 1
Query:   49 HIGSDGAPLQAPFDAAIVIPTLLRPSLAQALRSIFAQQNVGRIHILVGVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTRHGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGHDYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDKITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLNERDKGYAKRLEWI 789
             I    A  Q PFD A++IPT+LRP+LA+A+RS+FAQ   GR+ ILVG+D  EGD A I  + +E P      +++ GYSTS RHGG++     G+LRT+L+Y+ANSR++AYLDDDNW AP HL  L  AI+G D+AY+ R++V+ AT +P+CVD+ ESVGPDAG +KD   GFVDP+ LM+DK+ C  +  LWS+    D +    DR VF AL +H+RG PT   T FY +   D  +  RL  +
Sbjct:    4 QIDKSRASSQPPFDVAVIIPTVLRPALARAVRSVFAQDFAGRVQILVGIDTPEGDPALIEALGRECPATMQLAVLDPGYSTSVRHGGLYPNRFSGSLRTVLTYLANSRHIAYLDDDNWWAPGHLSSLAAAIEGADWAYSARYFVETATGEPICVDQWESVGPDAGLFKDKFGGFVDPSSLMIDKLACHDLPPLWSLAAFDDGS--GEDRLVFKALKEHFRGQPTGRATSFYVIRPDDPMHPARLHMM 248          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1152.1154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D9I236_9PROT5.070e-18690.88Glycosyltransferase n=2 Tax=Rhodospirillales TaxID... [more]
A0A7Y0DZH2_9PROT2.770e-9054.51Glycosyltransferase family 2 protein n=1 Tax=Pacif... [more]
A0A142XEL4_9BACT6.650e-8956.54Uncharacterized protein n=1 Tax=Gemmata sp. SH-PL1... [more]
A0A2E6QP25_9PROT3.340e-8250.40Glycosyltransferase n=1 Tax=Rhodospirillaceae bact... [more]
A0A023D0V1_ACIMT1.780e-7853.31Uncharacterized protein n=1 Tax=Acidomonas methano... [more]
A0A1Q3V3X5_9PROT3.290e-7749.20Glycosyltransferase n=1 Tax=Rhodospirillales bacte... [more]
UPI00131E95833.850e-7752.12glycosyltransferase family 2 protein n=1 Tax=Acidi... [more]
A0A7V7E8W7_9PROT1.130e-7649.57Glycosyltransferase family 2 protein n=1 Tax=Rhodo... [more]
A0A849HJV7_9PROT1.320e-7650.00Glycosyltransferase family 2 protein n=1 Tax=Acido... [more]
A0A8J2YUH2_9PROT5.080e-7549.39Uncharacterized protein n=1 Tax=Aliidongia dinghue... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1152contigD-herbacea_F_contig1152:67200..68024 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score225.3
Seed ortholog evalue3.4e-56
Seed eggNOG ortholog1307834.BARL01000005_gene2457
KEGG koko:K01002
KEGG Pathwayko01100,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyl transferase, family 2
EggNOG OGsCOG0463@1,COG0463@2
EC2.7.8.20
COG Functional cat.M
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size825
Cds size825
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927552.1602907-CDS-D-herbacea_F_contig1152:67199..680241622927552.1602907-CDS-D-herbacea_F_contig1152:67199..68024Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1152 67200..68024 +
1690790228.2742298-CDS-D-herbacea_F_contig1152:67199..680241690790228.2742298-CDS-D-herbacea_F_contig1152:67199..68024Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1152 67200..68024 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1152.1154.1prot_D-herbacea_F_contig1152.1154.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1152 67200..68024 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1152.1154.1

>prot_D-herbacea_F_contig1152.1154.1 ID=prot_D-herbacea_F_contig1152.1154.1|Name=mRNA_D-herbacea_F_contig1152.1154.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=275bp
MKSPTPKSPGSMPVAYHIGSDGAPLQAPFDAAIVIPTLLRPSLAQALRSI
FAQQNVGRIHILVGVDRAEGDIAAINPVFQEQPDNCVTTLVNLGYSTSTR
HGGIHAAGDGGALRTILSYMANSRYVAYLDDDNWLAPDHLEKLLTAIQGH
DYAYTLRWYVDPATLKPLCVDRLESVGPDAGGYKDSLRGFVDPNCLMLDK
ITCLAVLGLWSVPMNGDDTFLSADRRVFAALVQHYRGGPTHTPTVFYRLN
ERDKGYAKRLEWIAQQSNKNAGTQ*
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mRNA from alignment at D-herbacea_F_contig1152:67200..68024+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1152.1154.1 ID=mRNA_D-herbacea_F_contig1152.1154.1|Name=mRNA_D-herbacea_F_contig1152.1154.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=825bp|location=Sequence derived from alignment at D-herbacea_F_contig1152:67200..68024+ (Desmarestia herbacea DmunF female)
ATGAAATCCCCCACCCCAAAATCCCCTGGCAGCATGCCCGTTGCCTATCA CATCGGCAGCGACGGTGCGCCTTTACAGGCCCCGTTTGACGCGGCCATCG TTATCCCGACATTGCTGCGCCCCAGTCTGGCGCAAGCGCTGCGATCGATC TTTGCGCAACAGAATGTCGGGCGGATTCACATTCTGGTCGGCGTCGACCG GGCTGAAGGGGACATCGCTGCGATTAATCCCGTATTTCAGGAACAGCCCG ATAATTGTGTCACAACGCTGGTCAATCTGGGCTATTCAACATCCACCCGG CATGGCGGGATACATGCCGCCGGGGATGGCGGGGCACTGCGTACCATCCT CAGCTATATGGCCAACAGCCGCTATGTCGCCTATCTGGATGATGACAACT GGCTGGCACCGGACCATCTGGAAAAGCTGCTGACAGCCATTCAGGGGCAT GATTATGCCTATACCCTGCGCTGGTATGTCGACCCGGCAACGCTGAAGCC GTTATGCGTTGATCGGTTGGAATCAGTCGGGCCTGATGCGGGCGGGTATA AGGATTCCCTGCGGGGCTTCGTCGATCCCAATTGCCTGATGCTGGATAAG ATCACCTGTCTGGCGGTACTGGGCCTGTGGAGTGTTCCGATGAATGGGGA CGATACCTTCCTGTCCGCAGACCGCCGGGTTTTTGCAGCCCTGGTTCAAC ACTACCGGGGTGGCCCAACCCATACGCCGACCGTCTTTTATCGCCTGAAT GAACGGGATAAGGGCTATGCCAAACGCCTGGAATGGATTGCCCAACAGTC CAACAAAAATGCCGGGACCCAATGA
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Coding sequence (CDS) from alignment at D-herbacea_F_contig1152:67200..68024+

>mRNA_D-herbacea_F_contig1152.1154.1 ID=mRNA_D-herbacea_F_contig1152.1154.1|Name=mRNA_D-herbacea_F_contig1152.1154.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1650bp|location=Sequence derived from alignment at D-herbacea_F_contig1152:67200..68024+ (Desmarestia herbacea DmunF female)
ATGAAATCCCCCACCCCAAAATCCCCTGGCAGCATGCCCGTTGCCTATCA
CATCGGCAGCGACGGTGCGCCTTTACAGGCCCCGTTTGACGCGGCCATCG
TTATCCCGACATTGCTGCGCCCCAGTCTGGCGCAAGCGCTGCGATCGATC
TTTGCGCAACAGAATGTCGGGCGGATTCACATTCTGGTCGGCGTCGACCG
GGCTGAAGGGGACATCGCTGCGATTAATCCCGTATTTCAGGAACAGCCCG
ATAATTGTGTCACAACGCTGGTCAATCTGGGCTATTCAACATCCACCCGG
CATGGCGGGATACATGCCGCCGGGGATGGCGGGGCACTGCGTACCATCCT
CAGCTATATGGCCAACAGCCGCTATGTCGCCTATCTGGATGATGACAACT
GGCTGGCACCGGACCATCTGGAAAAGCTGCTGACAGCCATTCAGGGGCAT
GATTATGCCTATACCCTGCGCTGGTATGTCGACCCGGCAACGCTGAAGCC
GTTATGCGTTGATCGGTTGGAATCAGTCGGGCCTGATGCGGGCGGGTATA
AGGATTCCCTGCGGGGCTTCGTCGATCCCAATTGCCTGATGCTGGATAAG
ATCACCTGTCTGGCGGTACTGGGCCTGTGGAGTGTTCCGATGAATGGGGA
CGATACCTTCCTGTCCGCAGACCGCCGGGTTTTTGCAGCCCTGGTTCAAC
ACTACCGGGGTGGCCCAACCCATACGCCGACCGTCTTTTATCGCCTGAAT
GAACGGGATAAGGGCTATGCCAAACGCCTGGAATGGATTGCCCAACAGTC
CAACAAAAATGCCGGGACCCAATGAATGAAATCCCCCACCCCAAAATCCC
CTGGCAGCATGCCCGTTGCCTATCACATCGGCAGCGACGGTGCGCCTTTA
CAGGCCCCGTTTGACGCGGCCATCGTTATCCCGACATTGCTGCGCCCCAG
TCTGGCGCAAGCGCTGCGATCGATCTTTGCGCAACAGAATGTCGGGCGGA
TTCACATTCTGGTCGGCGTCGACCGGGCTGAAGGGGACATCGCTGCGATT
AATCCCGTATTTCAGGAACAGCCCGATAATTGTGTCACAACGCTGGTCAA
TCTGGGCTATTCAACATCCACCCGGCATGGCGGGATACATGCCGCCGGGG
ATGGCGGGGCACTGCGTACCATCCTCAGCTATATGGCCAACAGCCGCTAT
GTCGCCTATCTGGATGATGACAACTGGCTGGCACCGGACCATCTGGAAAA
GCTGCTGACAGCCATTCAGGGGCATGATTATGCCTATACCCTGCGCTGGT
ATGTCGACCCGGCAACGCTGAAGCCGTTATGCGTTGATCGGTTGGAATCA
GTCGGGCCTGATGCGGGCGGGTATAAGGATTCCCTGCGGGGCTTCGTCGA
TCCCAATTGCCTGATGCTGGATAAGATCACCTGTCTGGCGGTACTGGGCC
TGTGGAGTGTTCCGATGAATGGGGACGATACCTTCCTGTCCGCAGACCGC
CGGGTTTTTGCAGCCCTGGTTCAACACTACCGGGGTGGCCCAACCCATAC
GCCGACCGTCTTTTATCGCCTGAATGAACGGGATAAGGGCTATGCCAAAC
GCCTGGAATGGATTGCCCAACAGTCCAACAAAAATGCCGGGACCCAATGA
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