mRNA_D-herbacea_F_contig1146.1087.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1146.1087.1
Unique NamemRNA_D-herbacea_F_contig1146.1087.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Match: A0A6A4Z1S9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z1S9_9STRA)

HSP 1 Score: 288 bits (738), Expect = 2.140e-90
Identity = 164/391 (41.94%), Postives = 222/391 (56.78%), Query Frame = 1
Query:   13 LLSGSEQGQLGKGDLTRAAEKFACSRKQVYAVWSRYSQQR-DDGVVDINLRNGRGGRSGRK-RIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTLHNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWVREGHGGTRVFDEMGHVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRPRRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAGTPVTQMVEVTKEVYKRKMLDEVFPAIKAAWPGGPGD-VHVQQDNAPAHNIADDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQGPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHKQTAARRG 1176
            LL     G+L +G      +K+  SR+ +  +W R  Q R   G  D+ LR  + GRSGR+ +  +D+ + A+K VP   R T  + A+  GI   TL   L+   ++  +  LKP +T+  K  RVE+   +VR    G   +D+M + V +DEKWF++    +RYYL   E +PV K   K HI KVMFL  V RPR D      +DGK G++PF   V A+R S+NR  GTPVT  V VTK VY+  +L  V P IKA WPG   D +++QQDNA  H   DDP +  AG ADGW+I L+ QPP SPD N+LDLGFFNSIQ+LQ R  +  +D+L+  V R F       L + + T Q V+ + +  GGDN FK+PH  K    R G
Sbjct:   22 LLESKHSGRLARGVAAELLKKYGISRQTLSKIWKRGQQTRVQSGRADVGLR--KKGRSGRRPKRTLDEVESAVKSVPPHLRKTFASLAASSGIPPTTLWRVLQTKKLQRRTSRLKPMVTDKHKADRVEFVRSFVRPTSDGQMRWDDMHNRVHIDEKWFYLTLVNRRYYLWHDEAVPVRKCTSKRHIIKVMFLTAVARPRFDYTTRTMWDGKIGMWPFVSVVPARRKSKNRDRGTPVTTPVTVTKPVYRDYLLTHVIPRIKAVWPGRRSDPIYIQQDNARPHVEVDDPAVTMAGCADGWSIHLVAQPPMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFGDLEWRVLDKTFVTLQRVMGEALKMGGDNAFKLPHSQKDKTERLG 410          
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR)

HSP 1 Score: 278 bits (712), Expect = 4.160e-86
Identity = 157/406 (38.67%), Postives = 227/406 (55.91%), Query Frame = 1
Query:   10 YLLSGSEQGQLGKGDLTRAAEKFACSRKQVYAVWSRYSQQRDDGVVDINLRNGRGGRSGRKRIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTLHNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWVREGHGGTRVFDEMGHVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRPRRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAGTPVTQMVE-VTKEVYKRKMLDEVFPAIKAAWP--GGPGDVHVQQDNAPAHNIADDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQGPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHKQTAARRGVAISRALPCSEEAW 1218
            +LL  S+ G++  GD++ A  K+   R  +  +W  + + + +     NL +G  G  GRK ID D+ +  ++++PL  R T ++ A+ LG+S   +   LK    R  S  +KP LTE  +  RV++AL       GG  VF +M  VV +DEKWF      + YYL   E+ PV + Q K  I K MF+A V RPR D    + FDGK GI+ F     A+R S+NR  GT V + VE V +E YK   + ++ PAIKA WP  G    +++QQDNA  H   DDPDI+AAG + GW+IR+  QPPNSPD N+LDLG+F SIQSLQ +T    V+ L++ V   F+A   + L +++ T Q+ +  I+   G N +K PH  K    + G  +  +  CS E +
Sbjct:   17 FLLDRSDNGEISGGDISAAVAKYERHRSTISRLWELHKKTQTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNNYKTPHRGKDALKKAGQ-LPVSFACSAEVY 421          
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 278 bits (711), Expect = 8.250e-86
Identity = 154/384 (40.10%), Postives = 225/384 (58.59%), Query Frame = 1
Query:   13 LLSGSEQGQLGKGDLTRAAEKFACSRKQVYAVWSRYSQQRDD-GVVDI-NLRNGRGGRSGRKRIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTLHNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWVREGHGGTRVFDEMGHVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRPRRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAGTPVTQMVEVTKEVYKRKMLDEVFPAIKAAWPGGPG-DVHVQQDNAPAHNIADDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQGPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHK 1155
            LL     G++G G++    + F  S++ +  +W R  +     GV  + + + GR GR  RK  D D  + A+   P   R   R  A   G+ +  L   +K   +   +  L+P LT   +  R  +A  ++R+G+ G R + +M   V +DEKWF+I +  +R+YL   E  P  K Q K HI KVMFL  V RPR D+ + + +DGK G++PF  +  A+R S+NR  GTPVT  + VTK VY+R ++D+V PAI+A WPG  G  ++VQQDNA  H   DDP+++AAG  +GWNI+L+ QP  SPD N+LDLGFFN+IQSLQ +TT  T+D+LI+ V+  F       L + + T Q V+ + M + GDN +K+PHL K
Sbjct:   22 LLQLKRNGRVGHGEMKNLMQSFNISQQTISRIWRRGCETAASLGVAKVGSQKKGRCGRP-RKYKDED-VRSAVTSAPAHLRGNYRTMAKATGVPKTALWRLVKAKKLNRRTSRLRPMLTPQHRVARYNFAKSFIRDGYQGRRQWHDMLDCVHIDEKWFYITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKK 403          
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Match: A0A6P6W4A9_COFAR (uncharacterized protein LOC113730015 isoform X1 n=12 Tax=Coffea TaxID=13442 RepID=A0A6P6W4A9_COFAR)

HSP 1 Score: 274 bits (701), Expect = 6.850e-85
Identity = 159/386 (41.19%), Postives = 228/386 (59.07%), Query Frame = 1
Query:   13 LLSGSEQGQLGKGDLTRAAEKFACSRKQVYAVWSRYSQQRDDGVVDINLRNGRGGRSGRKRIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTLHNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWVR-EGHGGTRVFDEMGHVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRPRRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAGTPVTQ-MVEVTKEVYKRKMLDEVFPAIKAAWP---GGPGDVHVQQDNAPAHNIADDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQGPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHK 1155
            LL  S  G+L +G +   A  F  S + V  +W   +    DG VD++ R  +  R GRKR+DID     +  +PL+ RT  R+ +S++ +S+ TLH  +K   IR  S  LKP LT+  K+ R+ + L  +  E       F  M +VV +DEKWF++ K+ ++YYL   E+ P+   + K  I KVMFLA V RPR D   N  FDGK GIFPF     A+R+S+NR AGT  T+ ++ VTKEVY+R ++++V PAI A WP   G   ++ +QQDNA  H    DP  + A + DG++I L  QPPNSPD N+LDLG+F +IQSLQ +    ++DELI  V++ F     E+L  V+ T QS + ++M   G N +K+PH+ K
Sbjct:    6 LLQESNGGKLKRGTIRNIASLFKTSVRTVQRIWKLAAITSTDGRVDVSRRFSK--RCGRKRVDIDFT--LIMAIPLRRRTNIRSLSSEMKVSKSTLHRRIKEGAIRPHSNALKPQLTDQNKQVRLNFCLSMLEPESLNSNPTFMSMFNVVHIDEKWFYMTKECEKYYLHPQEEEPLRTCKSKKFIVKVMFLAAVARPRFDCSGNPTFDGKIGIFPFVFKEPAKRSSKNRMAGTLETKPILSVTKEVYRRCLIEQVLPAIHAKWPRDGGSVTEILIQQDNAKPHINPTDPVFIEAASRDGFDIHLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPLSIDELILAVEKSFDELSSESLNNVFLTLQSCMVEVMKNLGGNNYKVPHIGK 387          
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Match: UPI000CD9BE6A (uncharacterized protein LOC111905831 n=2 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9BE6A)

HSP 1 Score: 273 bits (698), Expect = 1.570e-84
Identity = 154/384 (40.10%), Postives = 230/384 (59.90%), Query Frame = 1
Query:   13 LLSGSEQGQLGKGDLTRAAEKFACSRKQVYAVWSRYSQQRDDGVVDINLRNGRGGRSGRKRIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTLHNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWV-REGHGGTRVFDEMGHVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRPRRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAGTPVTQ-MVEVTKEVYKRKMLDEVFPAIKAAWPGG-PGDVHVQQDNAPAHNIADDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQGPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHK 1155
            LL  +  G+L +G +   A  F  S++ V  +W+R   Q ++G + I+  + +    GRKR+ +D     + ++PL+ RTT ++ A  LGI + TLH  +K   +R  +  +KP LT+A K KR+E+ L  + R        F +M +V+ +DEKWF+I +  +RYYL  GED P+   + K  I KVMFLA V R R D + N  F GK GIFP T    A+R+S+NR AGT  T+ ++ VTKE+ +  ++++V PAIKA WP    G + +QQDNA  H   +D + + A + DG++IRL  QPPNSPD N+LDLGFF +IQSLQ++  L+TVDEL+  V+  F       L  V+ T Q+ + +I+   G N ++I H+ K
Sbjct:   25 LLQHNSNGELRRGSINDVAALFGVSKRTVSRIWNRAKLQVENGSI-IDFSSKKLKVVGRKRVQLDL--NQVSQIPLRRRTTIQSIAKSLGIVKSTLHRRIKEGDLRPRTNAIKPDLTDANKTKRLEFCLSMITRSLPESNTTFHDMFNVIHIDEKWFYISRSSKRYYLVPGEDEPLRTCKSKKFITKVMFLAAVARLRFDALGNEIFFGKIGIFPLTTKEPAKRSSKNRVAGTLETKPILSVTKEITRSWLIEKVLPAIKAKWPPNHTGPIFIQQDNAKPHIDVNDNEFLEASSQDGFDIRLCFQPPNSPDLNMLDLGFFRAIQSLQEQEVLHTVDELVTAVQTSFDKMQSHELNNVFLTLQTCMKEIIKVKGGNNYRISHIGK 405          
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.830e-84
Identity = 159/391 (40.66%), Postives = 217/391 (55.50%), Query Frame = 1
Query:   13 LLSGSEQGQLGKGDLTRAAEKFACSRKQVYAVWSRYSQQRDD-GVVDIN-LRNGRGGRSGRKRIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTLHNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWVREGHGGTRVFDEMGHVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRPRRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAGTPVTQMVEVTKEVYKRKMLDEVFPAIKAAWPGGPGD-VHVQQDNAPAHNIADDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQGPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHKQTAARRG 1176
            LL     G+L +G      +K+  SR+ +  V  R    R   G  D+  ++ GR GR  ++   +D  + A+K VP   R T    A+  GI   TL   L+   ++  +  LKP +T+  K  RVE+   +VR    G   +D+M   V +DEKWF++    +RYYL   ED+PV K   K HI KVMFL  V RPR D    R +DGK G++PF   V AQR S+NR  GTPVT  V VTK+VY+  +L+ V P IK  WPG     +++QQDNA  H   DD  +  AG +DGW+I+L+ QP  SPD N+LDLGFFNSIQ+LQ R  +  +D+L+  V R F       L + + T Q V+ + +  GGDN FK+PH  K   AR G
Sbjct:   22 LLENKRNGRLARGKAAELLQKYGISRQTLSKVRKRGQHSRAVFGRADVAAMKKGRSGRPPKR--TVDDVEAAVKSVPPHLRKTFVMLAASSGIPSTTLWRVLQTKKLQRRTSRLKPMVTDKHKADRVEFVQAFVRPSTNGQMRWDDMLDRVHIDEKWFYLTLVNRRYYLWHDEDVPVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVDDAAVTLAGHSDGWSIQLVAQPAMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFDDLDWSVLDKTFMTLQRVMGEALKMGGDNAFKLPHSKKDKTARLG 410          
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 273 bits (697), Expect = 4.590e-84
Identity = 154/391 (39.39%), Postives = 231/391 (59.08%), Query Frame = 1
Query:   13 LLSGSEQGQLGKGDLTRAAEKFACSRKQVYAVWSRYSQQRDDGVVDINLRNGRGGRSGRKRIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTLHNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWV-REGHGGTRVFDEMGHVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRPRRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAGTPVTQ-MVEVTKEVYKRKMLDEVFPAIKAAWPGGP-GDVHVQQDNAPAHNIADDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQGPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHKQTAARRG 1176
            LL  S  G+L +G ++  A +F+ S + V  +W +   Q + G+  + L +      GRKR+ +D   + L ++PL+ R+  R+ A+ L +S+ T+H  +K   +R  +  +KP LT   KR R+E+ L  + R        F +M +V+ +DEKWF++ K  +RYYL  GED P+   Q K  I KVMFLA V RPR D   N  F GK GI+PFTR   A+R+S+NR AGT  T+ ++ VTKEV +  ++++V P I+A WP    G + +QQDNA  H   +D + + A + DG++IRL  QP NSPD N+LDLGFF +IQSLQ++  L T+DEL+  V+  F     + L  V+ T Q+ + +I+   G N ++IPH+ K    R G
Sbjct:   25 LLQASFSGELQRGAISDVASQFSVSNRTVSRIWHQAKFQINHGLPVV-LSSNMAKVVGRKRVQVD-FNQVL-DIPLRRRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREG 412          
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08)

HSP 1 Score: 273 bits (698), Expect = 5.600e-84
Identity = 156/392 (39.80%), Postives = 229/392 (58.42%), Query Frame = 1
Query:   10 YLLSGSEQGQLGKGDLTRAAEKFACSRKQVYAVWSRYSQQRDDGVVDINLRNGRGGRSGRKRIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTLHNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWVREGHGGTRV-FDEMGHVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRPRRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAGTPVTQMVE-VTKEVYKRKMLDEVFPAIKAAWPGGPG-DVHVQQDNAPAHNIADDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQGPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHKQTAARRG 1176
            +LL  S  G L +G +  AA +F+ SRK VY +W     Q   G   I     +G +   K +++D+ K  ++ + +  R++ R  A  L +S+ T+HN +K   +R  +  +KP LTE  K  R++W L  ++      +V F  M ++V +DEKWF++ K   RYYL   ED P    + K +I KVMF+  V RP+ D+     +DGK GIFPFT +V AQR S+NR  GT  T+ +  + KEV +  ++ ++ PAIKA WP     ++++QQDNA  H  A DP+  A   +DG+ I LI QPPNSPDTNILDLGFF +IQSLQ +     VDEL+E V + +    P+ L RV+ + Q+ L QI+   GDN++K+PH++K    R G
Sbjct:   23 FLLKHSHLGVLRRGTVMEAAGEFSISRKTVYRLWKVAKDQMQQGEPAIMEGKLKGYQHADK-LNLDEDK--VRNLSILQRSSIRTMACNLSVSKTTIHNWIKQDKLRPHTNAIKPALTELNKLARLKWCLTQLQPSITQGKVHFHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWASKEIYIQQDNATPHITATDPEFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTG 411          
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3)

HSP 1 Score: 271 bits (694), Expect = 1.330e-83
Identity = 152/392 (38.78%), Postives = 232/392 (59.18%), Query Frame = 1
Query:   13 LLSGSEQGQLGKGDLTRAAEKFACSRKQVYAVWSRYSQQRDDGVVDINLRNGRGGRSGRKRIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTLHNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWVREGHGGTRV--FDEMGHVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRPRRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAGTPVTQ-MVEVTKEVYKRKMLDEVFPAIKAAWPGG-PGDVHVQQDNAPAHNIADDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQGPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHKQTAARRG 1176
            LL  S  G+L KG ++  A  F+ S++ V  +W +   Q D G+  ++  +      G+KR+ I+     + E+PL++R+  R+ A  L +S+ TLH  +K   +R  +  +KP LT   +R R+E+ L  +      + +  F +M +VV +DEKWF++ K  +RYYL  G+D P+   + K  I K+MFLA V RPR D+  N  F GK GI+PFT    A+R+S+NR AGT  T+ ++ V KEV +  ++++V P I+A WP G  G + +QQDNA  H   DD + + A + DG++IRL  QPPNSPD N+LDLGFF +IQSLQ++  L+T DEL+  V+  F     + L  V+ T Q+ + +I+   G N + IPH+ K    R+G
Sbjct:   25 LLQESFDGRLKKGSVSEVASLFSVSKRTVSRIWHQGKNQVDHGLP-VDFSSNMPMVVGQKRVQINL--NQVSEIPLRHRSNIRSLAKSLNVSKSTLHRRIKEGVLRPHTNVIKPTLTHENRRARLEYCLSKITLSSLFSPIPTFHDMFNVVHIDEKWFYMSKPSKRYYLVPGDDEPLRTCKSKKFITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKRSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWPRGHTGPIFIQQDNAKPHIDVDDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEALSTTDELVNAVQTSFERMQSQQLNNVFLTLQTCMKEIIKVQGGNNYHIPHIGKSRLDRQG 413          
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Match: A0A484LEE5_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LEE5_9ASTE)

HSP 1 Score: 271 bits (692), Expect = 5.510e-83
Identity = 162/400 (40.50%), Postives = 232/400 (58.00%), Query Frame = 1
Query:    1 LSTYLLSGSEQGQLGK-----GDLTRAAEKFACSRKQVYAVWSRYSQQRDDGVVDINLRNGRGGRSGRKRIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTLHNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWVRE-GHGGTRVFDEMGHVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRPRRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAG-TPVTQMVEVTKEVYKRKMLDEVFPAIKAAWPGGPG-DVHVQQDNAPAHNIADDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQGPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHKQTAARRG 1176
            +S  LLS S+Q   G      G +T+ A  F  SRK V  +W+   +Q + G   I++ +   G SGRKR  +D     + + PL+ RT  RA A+ +G  + T+H  +K   +R+ S  +KP+LT+A K  R+ + L  V     G    F    +V+ +DEKWFFI K  QR+YL   E  P    + K  I KVMFL VVGRP         +DGK GIF FT  V A+RNS+NRA G   V  +  VTK++ K  ++++V PAI+  WP     ++H+QQDNA  H    D D VAAG  +G++I L NQPPNSP+ N+LDLGFF +IQSL+++   NTV EL+E V+  +++  PE L +VW +YQ VL ++M     N +++PH+ K + A+ G
Sbjct:   18 ISDALLSHSKQNPDGSFSAQYGQITKLASNFKVSRKTVSKIWAIAKKQLERGAA-IDVSSKIAGNSGRKRAVLDLT--VVADTPLRKRTNLRALAAAIGQPKSTVHEWVKRGMLRSHSNAIKPYLTDANKITRLRFCLDQVDPYTMGSVPKFKTFNNVLHIDEKWFFISKTSQRFYLFPDEADPYRACKSKRFIAKVMFLCVVGRPLFGENEEVLWDGKVGIFHFTERVKAKRNSKNRAKGEVEVKAITSVTKQITKDMLINKVIPAIQEKWPSQLSKEIHIQQDNARPHIQGIDSDFVAAGNTNGFHITLGNQPPNSPNLNVLDLGFFRAIQSLKEQCAPNTVTELLEAVEGAYSSLRPETLNKVWLSYQQVLTKVMEDERGNNYRLPHMGKDSLAKAG 414          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1146.1087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4Z1S9_9STRA2.140e-9041.94Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W2NW41_PHYPR4.160e-8638.67HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Ph... [more]
A0A6A5AA16_9STRA8.250e-8640.10Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6P6W4A9_COFAR6.850e-8541.19uncharacterized protein LOC113730015 isoform X1 n=... [more]
UPI000CD9BE6A1.570e-8440.10uncharacterized protein LOC111905831 n=2 Tax=Lactu... [more]
A0A485KDC6_9STRA1.830e-8440.66Aste57867_3131 protein n=1 Tax=Aphanomyces stellat... [more]
UPI000CD873B34.590e-8439.39uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
UPI0020091A085.600e-8439.80uncharacterized protein LOC125206097 n=1 Tax=Salvi... [more]
UPI000CD9DCB31.330e-8338.78uncharacterized protein LOC111916103 n=1 Tax=Lactu... [more]
A0A484LEE5_9ASTE5.510e-8340.50Uncharacterized protein n=2 Tax=Cuscuta campestris... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1146contigD-herbacea_F_contig1146:18444..19703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score273.5
Seed ortholog evalue1.7e-70
Seed eggNOG ortholog38727.Pavir.Eb00546.1.p
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMKC@1,2QQNW@2759,37TMG@33090,3GG9M@35493,3IN2T@38820,3M2XW@4447
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons1
Model size1260
Cds size1260
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927543.5339992-CDS-D-herbacea_F_contig1146:18443..197031622927543.5339992-CDS-D-herbacea_F_contig1146:18443..19703Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1146 18444..19703 +
1690790224.9863157-CDS-D-herbacea_F_contig1146:18443..197031690790224.9863157-CDS-D-herbacea_F_contig1146:18443..19703Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1146 18444..19703 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1146.1087.1prot_D-herbacea_F_contig1146.1087.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1146 18444..19703 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1146.1087.1

>prot_D-herbacea_F_contig1146.1087.1 ID=prot_D-herbacea_F_contig1146.1087.1|Name=mRNA_D-herbacea_F_contig1146.1087.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=420bp
LSTYLLSGSEQGQLGKGDLTRAAEKFACSRKQVYAVWSRYSQQRDDGVVD
INLRNGRGGRSGRKRIDIDKCKEALKEVPLQNRTTQRAAASQLGISQQTL
HNNLKHLGIRAASRFLKPFLTEAGKRKRVEWALRWVREGHGGTRVFDEMG
HVVMVDEKWFFIKKQGQRYYLGQGEDLPVEKVQHKSHIKKVMFLAVVGRP
RRDTVNNRNFDGKFGIFPFTRSVAAQRNSRNRAAGTPVTQMVEVTKEVYK
RKMLDEVFPAIKAAWPGGPGDVHVQQDNAPAHNIADDPDIVAAGTADGWN
IRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVKRVFAAQ
GPEALGRVWTTYQSVLHQIMLTGGDNTFKIPHLHKQTAARRGVAISRALP
CSEEAWVKAQEAAGGAGGE*
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mRNA from alignment at D-herbacea_F_contig1146:18444..19703+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1146.1087.1 ID=mRNA_D-herbacea_F_contig1146.1087.1|Name=mRNA_D-herbacea_F_contig1146.1087.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1260bp|location=Sequence derived from alignment at D-herbacea_F_contig1146:18444..19703+ (Desmarestia herbacea DmunF female)
TTGAGCACCTACCTGCTTTCGGGCAGCGAACAAGGCCAACTGGGCAAGGG CGACCTCACTCGAGCTGCAGAAAAGTTTGCATGCTCTCGCAAGCAGGTCT ATGCAGTGTGGTCGCGCTACTCGCAGCAGAGGGATGACGGTGTCGTCGAC ATCAACCTGCGCAATGGCCGTGGTGGACGGTCTGGCAGAAAACGCATCGA TATCGACAAATGCAAAGAGGCCCTGAAAGAGGTACCACTGCAGAACCGGA CCACCCAGAGGGCTGCTGCAAGTCAGCTCGGCATATCACAGCAGACACTC CACAACAACCTCAAGCACCTGGGGATACGTGCGGCGTCTCGGTTCCTCAA GCCGTTTCTTACGGAAGCGGGCAAGAGGAAGAGGGTGGAGTGGGCGCTTC GTTGGGTGCGAGAGGGCCATGGTGGCACTCGTGTCTTCGACGAGATGGGC CACGTCGTCATGGTGGATGAGAAGTGGTTTTTCATCAAGAAGCAGGGCCA GCGCTACTACCTTGGTCAAGGTGAAGACCTGCCGGTGGAAAAAGTGCAAC ACAAGTCGCACATCAAGAAAGTGATGTTCTTGGCGGTCGTTGGGCGACCG CGCAGGGACACGGTCAACAACCGAAACTTCGACGGGAAGTTCGGCATCTT CCCGTTCACCAGGTCGGTGGCGGCCCAGCGTAACAGCAGGAACAGGGCTG CTGGGACGCCGGTGACTCAAATGGTGGAGGTTACGAAGGAGGTTTACAAG AGGAAGATGTTGGACGAGGTCTTCCCTGCCATCAAGGCCGCGTGGCCGGG CGGGCCGGGAGACGTCCACGTCCAGCAGGACAACGCTCCGGCACACAACA TCGCGGACGACCCGGACATTGTGGCGGCGGGTACTGCCGACGGGTGGAAT ATTCGACTCATCAACCAGCCGCCCAACAGCCCAGACACCAACATCCTGGA CTTGGGGTTTTTCAACTCCATCCAATCCCTCCAGGACCGGACGACGCTGA ACACGGTGGACGAGCTGATCGAGGAGGTGAAGAGGGTGTTCGCTGCGCAG GGGCCTGAGGCCCTGGGCAGGGTCTGGACGACCTACCAGTCCGTCCTCCA TCAGATAATGCTGACGGGCGGCGACAATACATTCAAGATCCCGCACCTGC ACAAGCAGACGGCGGCTCGTCGTGGTGTGGCGATCTCGCGTGCCTTGCCG TGCAGCGAGGAGGCGTGGGTCAAGGCTCAGGAAGCCGCGGGTGGGGCGGG AGGAGAGTGA
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Coding sequence (CDS) from alignment at D-herbacea_F_contig1146:18444..19703+

>mRNA_D-herbacea_F_contig1146.1087.1 ID=mRNA_D-herbacea_F_contig1146.1087.1|Name=mRNA_D-herbacea_F_contig1146.1087.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2520bp|location=Sequence derived from alignment at D-herbacea_F_contig1146:18444..19703+ (Desmarestia herbacea DmunF female)
TTGAGCACCTACCTGCTTTCGGGCAGCGAACAAGGCCAACTGGGCAAGGG
CGACCTCACTCGAGCTGCAGAAAAGTTTGCATGCTCTCGCAAGCAGGTCT
ATGCAGTGTGGTCGCGCTACTCGCAGCAGAGGGATGACGGTGTCGTCGAC
ATCAACCTGCGCAATGGCCGTGGTGGACGGTCTGGCAGAAAACGCATCGA
TATCGACAAATGCAAAGAGGCCCTGAAAGAGGTACCACTGCAGAACCGGA
CCACCCAGAGGGCTGCTGCAAGTCAGCTCGGCATATCACAGCAGACACTC
CACAACAACCTCAAGCACCTGGGGATACGTGCGGCGTCTCGGTTCCTCAA
GCCGTTTCTTACGGAAGCGGGCAAGAGGAAGAGGGTGGAGTGGGCGCTTC
GTTGGGTGCGAGAGGGCCATGGTGGCACTCGTGTCTTCGACGAGATGGGC
CACGTCGTCATGGTGGATGAGAAGTGGTTTTTCATCAAGAAGCAGGGCCA
GCGCTACTACCTTGGTCAAGGTGAAGACCTGCCGGTGGAAAAAGTGCAAC
ACAAGTCGCACATCAAGAAAGTGATGTTCTTGGCGGTCGTTGGGCGACCG
CGCAGGGACACGGTCAACAACCGAAACTTCGACGGGAAGTTCGGCATCTT
CCCGTTCACCAGGTCGGTGGCGGCCCAGCGTAACAGCAGGAACAGGGCTG
CTGGGACGCCGGTGACTCAAATGGTGGAGGTTACGAAGGAGGTTTACAAG
AGGAAGATGTTGGACGAGGTCTTCCCTGCCATCAAGGCCGCGTGGCCGGG
CGGGCCGGGAGACGTCCACGTCCAGCAGGACAACGCTCCGGCACACAACA
TCGCGGACGACCCGGACATTGTGGCGGCGGGTACTGCCGACGGGTGGAAT
ATTCGACTCATCAACCAGCCGCCCAACAGCCCAGACACCAACATCCTGGA
CTTGGGGTTTTTCAACTCCATCCAATCCCTCCAGGACCGGACGACGCTGA
ACACGGTGGACGAGCTGATCGAGGAGGTGAAGAGGGTGTTCGCTGCGCAG
GGGCCTGAGGCCCTGGGCAGGGTCTGGACGACCTACCAGTCCGTCCTCCA
TCAGATAATGCTGACGGGCGGCGACAATACATTCAAGATCCCGCACCTGC
ACAAGCAGACGGCGGCTCGTCGTGGTGTGGCGATCTCGCGTGCCTTGCCG
TGCAGCGAGGAGGCGTGGGTCAAGGCTCAGGAAGCCGCGGGTGGGGCGGG
AGGAGAGTGATTGAGCACCTACCTGCTTTCGGGCAGCGAACAAGGCCAAC
TGGGCAAGGGCGACCTCACTCGAGCTGCAGAAAAGTTTGCATGCTCTCGC
AAGCAGGTCTATGCAGTGTGGTCGCGCTACTCGCAGCAGAGGGATGACGG
TGTCGTCGACATCAACCTGCGCAATGGCCGTGGTGGACGGTCTGGCAGAA
AACGCATCGATATCGACAAATGCAAAGAGGCCCTGAAAGAGGTACCACTG
CAGAACCGGACCACCCAGAGGGCTGCTGCAAGTCAGCTCGGCATATCACA
GCAGACACTCCACAACAACCTCAAGCACCTGGGGATACGTGCGGCGTCTC
GGTTCCTCAAGCCGTTTCTTACGGAAGCGGGCAAGAGGAAGAGGGTGGAG
TGGGCGCTTCGTTGGGTGCGAGAGGGCCATGGTGGCACTCGTGTCTTCGA
CGAGATGGGCCACGTCGTCATGGTGGATGAGAAGTGGTTTTTCATCAAGA
AGCAGGGCCAGCGCTACTACCTTGGTCAAGGTGAAGACCTGCCGGTGGAA
AAAGTGCAACACAAGTCGCACATCAAGAAAGTGATGTTCTTGGCGGTCGT
TGGGCGACCGCGCAGGGACACGGTCAACAACCGAAACTTCGACGGGAAGT
TCGGCATCTTCCCGTTCACCAGGTCGGTGGCGGCCCAGCGTAACAGCAGG
AACAGGGCTGCTGGGACGCCGGTGACTCAAATGGTGGAGGTTACGAAGGA
GGTTTACAAGAGGAAGATGTTGGACGAGGTCTTCCCTGCCATCAAGGCCG
CGTGGCCGGGCGGGCCGGGAGACGTCCACGTCCAGCAGGACAACGCTCCG
GCACACAACATCGCGGACGACCCGGACATTGTGGCGGCGGGTACTGCCGA
CGGGTGGAATATTCGACTCATCAACCAGCCGCCCAACAGCCCAGACACCA
ACATCCTGGACTTGGGGTTTTTCAACTCCATCCAATCCCTCCAGGACCGG
ACGACGCTGAACACGGTGGACGAGCTGATCGAGGAGGTGAAGAGGGTGTT
CGCTGCGCAGGGGCCTGAGGCCCTGGGCAGGGTCTGGACGACCTACCAGT
CCGTCCTCCATCAGATAATGCTGACGGGCGGCGACAATACATTCAAGATC
CCGCACCTGCACAAGCAGACGGCGGCTCGTCGTGGTGTGGCGATCTCGCG
TGCCTTGCCGTGCAGCGAGGAGGCGTGGGTCAAGGCTCAGGAAGCCGCGG
GTGGGGCGGGAGGAGAGTGA
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