prot_D-herbacea_F_contig1.102.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1.102.1
Unique Nameprot_D-herbacea_F_contig1.102.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length255
Homology
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BLAST of mRNA_D-herbacea_F_contig1.102.1 vs. uniprot
Match: D7FUD5_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD5_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 3.850e-34
Identity = 77/149 (51.68%), Postives = 96/149 (64.43%), Query Frame = 0 
Query:  106 AEVAAPWVEDSVKARLRELLSDEGQDGEGNEGVATRPRPTPTVIRPRPEGAAEAEMGLIESIRLRQSSRAACPECRSDLLRSTHTFNSDGTPLGLSNSSSHHSASIMLGLNPADTATTATATKNKSKKLHPCSAHRHRSSPGEGGLPGL 254
            AEVAAPWVEDSVKA ++ELL+   Q  +      +  RPTP V+RPRP+GAAE E GL+E IR +++S A CPEC+ D+LR TH FNSDG P+GLS  S+H +  I    +P               K+  CSAHR R+ PGEGGLPGL
Sbjct:  490 AEVAAPWVEDSVKASMQELLAPRRQPSKEGSDATSHTRPTPAVVRPRPKGAAEEEAGLMEFIRSQRNSMAECPECQQDMLRQTHAFNSDGVPIGLS--SAHGTYRISSAGSPG--------------KVKMCSAHRARAQPGEGGLPGL 622
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BLAST of mRNA_D-herbacea_F_contig1.102.1 vs. uniprot
Match: A0A6H5KJE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJE3_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 7.990e-32
Identity = 74/149 (49.66%), Postives = 95/149 (63.76%), Query Frame = 0 
Query:  106 AEVAAPWVEDSVKARLRELLSDEGQDGEGNEGVATRPRPTPTVIRPRPEGAAEAEMGLIESIRLRQSSRAACPECRSDLLRSTHTFNSDGTPLGLSNSSSHHSASIMLGLNPADTATTATATKNKSKKLHPCSAHRHRSSPGEGGLPGL 254
            AEVAAPWVEDSVKA ++ELL+   Q  E      +  RPTP V+RPRP+GAAE E GL+E IR +++S A CPEC+ D+LR TH  NS+G P+G+S  S+H +  I    +P               K+  CSAHR R+ PG+GGLPGL
Sbjct:  662 AEVAAPWVEDSVKASMQELLAPRSQPSEEGSDCTSHTRPTPAVVRPRPKGAAEEEAGLMEFIRSQRNSVAECPECQRDMLRQTHASNSNGVPIGVS--SAHGTYRISSSRSPG--------------KVKMCSAHRARAQPGKGGLPGL 794
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUD5_ECTSI3.850e-3451.68Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KJE3_9PHAE7.990e-3249.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1..30
e-value: 0.2
score: 20.8
coord: 35..64
e-value: 21.0
score: 14.0
coord: 68..97
e-value: 0.075
score: 22.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 68..100
score: 13.037
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..33
score: 11.14
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 35..67
score: 10.419
NoneNo IPR availablePFAMPF13857Ank_5coord: 55..109
e-value: 3.9E-9
score: 36.6
NoneNo IPR availablePANTHERPTHR24128FAMILY NOT NAMEDcoord: 37..168
coord: 3..80
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..135
e-value: 4.7E-29
score: 103.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..110
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..110
score: 32.306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1contigD-herbacea_F_contig1:2670990..2679005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1.102.1mRNA_D-herbacea_F_contig1.102.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1 2670990..2679005 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1.102.1 ID=prot_D-herbacea_F_contig1.102.1|Name=mRNA_D-herbacea_F_contig1.102.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=255bp
SRRTPLHHAGRWGSPGTSVLLLDAGADIEARDEELARTPLHFSSRSGGLG
TTLVLLQNGADLDAKTVAGNTPLHLACDRGLVENVKLLLEWGANRKVLNE
AGNVPAEVAAPWVEDSVKARLRELLSDEGQDGEGNEGVATRPRPTPTVIR
PRPEGAAEAEMGLIESIRLRQSSRAACPECRSDLLRSTHTFNSDGTPLGL
SNSSSHHSASIMLGLNPADTATTATATKNKSKKLHPCSAHRHRSSPGEGG
LPGLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt