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Homology
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: D7FI71_ECTSI (Ribosomal_L14e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI71_ECTSI) HSP 1 Score: 226 bits (576), Expect = 3.310e-70 Identity = 112/133 (84.21%), Postives = 124/133 (93.23%), Query Frame = 1
Query: 1 GFTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPDTGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQAAA 399
GFTRFVEIGRVVLVNYGP EGKLAVI+DV DNNKAL++GPDTGVPRQ+IPFKRL+LTDFKLPIQRN+R GTI A KEADL AKW+ASSWAKK+A+K+KRA M DFDRF+VMVARKQKSAIIAKKV+ELQAAA
Sbjct: 2 GFTRFVEIGRVVLVNYGPDEGKLAVILDVADNNKALIEGPDTGVPRQLIPFKRLALTDFKLPIQRNARIGTIKAAAKEADLYAKWEASSWAKKKAKKVKRAQMTDFDRFKVMVARKQKSAIIAKKVAELQAAA 134
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A835YLN7_9STRA (Ribosomal protein L14-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN7_9STRA) HSP 1 Score: 177 bits (448), Expect = 5.320e-51 Identity = 87/135 (64.44%), Postives = 111/135 (82.22%), Query Frame = 1
Query: 1 GFTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQAAA 399
GFTRFVEIGRV L+NYGP EGKL IIDVVD+NKAL+DGP+ TGV RQMIPFKRL+LTDFK+ I RN+R GT+ KA EAD++AKW A++WA+KRA K KRAS+ D DRF++M+ARKQK+ + +++L+ +A
Sbjct: 2 GFTRFVEIGRVALINYGPDEGKLCTIIDVVDHNKALIDGPEELTGVKRQMIPFKRLALTDFKVKILRNARQGTLKKAFAEADVLAKWGATAWARKRAAKAKRASLGDLDRFKLMIARKQKARAVNTALAKLKKSA 136
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: F0YD47_AURAN (Ribosomal_L14e domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD47_AURAN) HSP 1 Score: 174 bits (441), Expect = 5.000e-50 Identity = 88/130 (67.69%), Postives = 107/130 (82.31%), Query Frame = 1
Query: 4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGP--DTGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSEL 387
F+RFVE+GRVVL+NYGP EGKLA IID+VD NK LVDGP TGV RQ+IPFKR++LTD + I +N+R T++KA EAD++AKWDASSWAKK A K KRAS+ DF RFQ+MVARKQ+SAI+A KV E+
Sbjct: 1 FSRFVEVGRVVLINYGPDEGKLATIIDIVDGNKCLVDGPATKTGVARQVIPFKRVALTDIVVKIPKNARQKTLNKAWDEADVLAKWDASSWAKKLAAKKKRASLTDFQRFQLMVARKQRSAIVAAKVKEM 130
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A6U0GYB4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0GYB4_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.240e-48 Identity = 87/132 (65.91%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
FTR+VEIGRVVL+NYGP GKLA IID+VD NK LV+GP TGV RQ+IP+KR++LTD K+ I RN+R+ T+ A EAD + +W++SSWAKK A K KRAS++DFDRF+VMVARKQKSAII KK+ EL+A
Sbjct: 4 FTRYVEIGRVVLINYGPDAGKLATIIDIVDQNKCLVEGPADITGVTRQVIPYKRIALTDLKVKICRNARSKTLKAAWAEADTLKQWESSSWAKKLAAKKKRASLSDFDRFKVMVARKQKSAIIEKKIKELKA 135
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A7S0F6W3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F6W3_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.690e-48 Identity = 85/132 (64.39%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
F R+VE+GRVVL+NYGP EGKLA IID+VD NK L+DGP TG PRQ+I F R++LTD + IQRN+R ++ KA +E + ++KWDASSWAKK A + KRAS++DFDRF+VMVARKQK+ IIAKKV+EL+A
Sbjct: 3 FKRYVEVGRVVLINYGPDEGKLATIIDIVDQNKCLIDGPMEITGAPRQVISFTRIALTDLTVKIQRNARQKSLKKAWEEGETMSKWDASSWAKKLAARKKRASLSDFDRFKVMVARKQKNEIIAKKVAELEA 134
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A6U6K629_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U6K629_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.380e-48 Identity = 81/132 (61.36%), Postives = 109/132 (82.58%), Query Frame = 1
Query: 4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
F+R+VE+GRVVL+NYGP GKLA +ID+VD NK L+DGP+ TGV RQ+IP+KR++LTD K+ +QR++RA T+ A KE D + KW++SSWAKK A K KRA+++DFDRF+VMVA+KQK I+AKKV E++A
Sbjct: 3 FSRYVEVGRVVLINYGPESGKLATVIDIVDQNKCLIDGPEEITGVSRQVIPYKRIALTDLKVNVQRSARAKTLKAAWKEGDTLNKWESSSWAKKLASKKKRANLSDFDRFKVMVAKKQKRYIVAKKVKEMKA 134
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A7S2S552_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S552_9STRA) HSP 1 Score: 169 bits (429), Expect = 3.360e-48 Identity = 84/132 (63.64%), Postives = 107/132 (81.06%), Query Frame = 1
Query: 4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
FTR+ E+GRVVL+N+GP GKLA IID+VD NK LV+GP+ TGV R++IPF+RL LTDF + I RN+R+ T+ A KEAD+ AKW+A+SWAKK K KRA ++DF RF+VMVARKQKSAII+KK+ EL+A
Sbjct: 3 FTRYAEVGRVVLINFGPDAGKLATIIDIVDQNKCLVEGPEDITGVSRKVIPFRRLQLTDFTVKISRNARSKTLKAAWKEADISAKWEATSWAKKLDNKAKRADLSDFGRFKVMVARKQKSAIISKKIKELKA 134
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A7S2EK65_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EK65_TRICV) HSP 1 Score: 171 bits (434), Expect = 3.750e-48 Identity = 85/132 (64.39%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
FTR+VE+GRVVL+NYGP EGKLA IID+VD NK L+DGP TGV RQ+IP+KR++LTD + I RN+RA T+ KA E D+ AKWD SSWAKK + K KRAS++DF RF+VMVA+K++SAI+AKK+ EL+A
Sbjct: 61 FTRYVEVGRVVLINYGPEEGKLATIIDIVDQNKCLIDGPADLTGVVRQVIPYKRIALTDITVKIARNARAKTLKKAWTEGDVQAKWDGSSWAKKLSSKKKRASLSDFGRFKVMVAKKKRSAIVAKKIKELKA 192
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A7S2SNQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNQ8_9STRA) HSP 1 Score: 168 bits (425), Expect = 2.330e-47 Identity = 83/130 (63.85%), Postives = 104/130 (80.00%), Query Frame = 1
Query: 1 GFTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSE 384
GF+RFVE+GRVVL+ YGP GKLA +ID+VD NK LVDGP+ TGV RQ+I + R+ LTD K+ IQRN+RA T+ A KEAD +AKW+ S WAKK A K KRAS++DFDRF+VM+A+KQKS IIA+K+ E
Sbjct: 23 GFSRFVEVGRVVLITYGPSAGKLATVIDIVDQNKCLVDGPEEITGVSRQVISYSRIQLTDLKVNIQRNARAKTLKAALKEADTMAKWEGSEWAKKLAAKSKRASLSDFDRFKVMLAKKQKSKIIAQKIKE 152
BLAST of mRNA_D-herbacea_F_contig111.944.1 vs. uniprot
Match: A0A6V2NE85_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NE85_9STRA) HSP 1 Score: 167 bits (423), Expect = 2.620e-47 Identity = 84/132 (63.64%), Postives = 107/132 (81.06%), Query Frame = 1
Query: 4 FTRFVEIGRVVLVNYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARKIKRASMNDFDRFQVMVARKQKSAIIAKKVSELQA 393
F+R+VE+GR+VL+NYGP GKLA IID+VD NK L+DGP TGV RQ+I + R++LTD K+ IQRN+RA T+ A EAD+ KWD SSWAKK A K KRAS++DFDRF+VMVA+KQKS+II+KK+ EL+A
Sbjct: 3 FSRYVEVGRIVLINYGPDAGKLATIIDIVDQNKCLIDGPTEITGVVRQVISYTRIALTDLKVNIQRNARAKTLKAAWAEADIQNKWDGSSWAKKLATKKKRASLSDFDRFKVMVAKKQKSSIISKKMKELKA 134
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 137.5 |
| Seed ortholog evalue | 3e-30 |
| Seed eggNOG ortholog | 2880.D7FI71 |
| Preferred name | RPL14 |
| KEGG ko | ko:K02875,ko:K12867 |
| KEGG Pathway | ko03010,ko03040,map03010,map03040 |
| KEGG Module | M00177,M00179,M00355 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005844,GO:0005911,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006914,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009719,GO:0009725,GO:0009733,GO:0009889,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010605,GO:0010629,GO:0010941,GO:0012505,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016070,GO:0016071,GO:0016072,GO:0016236,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030054,GO:0030684,GO:0030687,GO:0030867,GO:0031090,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042175,GO:0042221,GO:0042254,GO:0042273,GO:0042788,GO:0042886,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043523,GO:0043524,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051641,GO:0051649,GO:0055044,GO:0060255,GO:0060548,GO:0061919,GO:0065007,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098805,GO:0098827,GO:0140110,GO:1901214,GO:1901215,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 |
| EggNOG free text desc. | ribosomal large subunit biogenesis |
| EggNOG OGs | COG2163@1,KOG3421@2759 |
| Ec32 ortholog description | Ribosomal protein L2 domain 2 |
| Ec32 ortholog | Ec-23_003620.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01610,ko00000,ko00001,ko00002,ko03011,ko03019,ko03041 |
| Exons | 4 |
| Model size | 1219 |
| Cds size | 261 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927523.462808-UTR-D-herbacea_F_contig111:391664..391766 | 1622927523.462808-UTR-D-herbacea_F_contig111:391664..391766 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig111 391665..391766 + |
| 1690790214.5914214-UTR-D-herbacea_F_contig111:391664..391766 | 1690790214.5914214-UTR-D-herbacea_F_contig111:391664..391766 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig111 391665..391766 + |
| 1622927523.473453-UTR-D-herbacea_F_contig111:394254..394293 | 1622927523.473453-UTR-D-herbacea_F_contig111:394254..394293 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig111 394255..394293 + |
| 1690790214.605067-UTR-D-herbacea_F_contig111:394254..394293 | 1690790214.605067-UTR-D-herbacea_F_contig111:394254..394293 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig111 394255..394293 + |
| 1622927523.5162725-UTR-D-herbacea_F_contig111:396647..397464 | 1622927523.5162725-UTR-D-herbacea_F_contig111:396647..397464 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig111 396648..397464 + |
| 1690790214.6390183-UTR-D-herbacea_F_contig111:396647..397464 | 1690790214.6390183-UTR-D-herbacea_F_contig111:396647..397464 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig111 396648..397464 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927523.4847655-CDS-D-herbacea_F_contig111:394293..394383 | 1622927523.4847655-CDS-D-herbacea_F_contig111:394293..394383 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig111 394294..394383 + |
| 1690790214.613228-CDS-D-herbacea_F_contig111:394293..394383 | 1690790214.613228-CDS-D-herbacea_F_contig111:394293..394383 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig111 394294..394383 + |
| 1622927523.4956248-CDS-D-herbacea_F_contig111:395430..395529 | 1622927523.4956248-CDS-D-herbacea_F_contig111:395430..395529 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig111 395431..395529 + |
| 1690790214.6212382-CDS-D-herbacea_F_contig111:395430..395529 | 1690790214.6212382-CDS-D-herbacea_F_contig111:395430..395529 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig111 395431..395529 + |
| 1622927523.5065384-CDS-D-herbacea_F_contig111:396575..396647 | 1622927523.5065384-CDS-D-herbacea_F_contig111:396575..396647 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig111 396576..396647 + |
| 1690790214.6300015-CDS-D-herbacea_F_contig111:396575..396647 | 1690790214.6300015-CDS-D-herbacea_F_contig111:396575..396647 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig111 396576..396647 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig111.944.1 >prot_D-herbacea_F_contig111.944.1 ID=prot_D-herbacea_F_contig111.944.1|Name=mRNA_D-herbacea_F_contig111.944.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=87bp
MIPFKRLSLTDFKLPIQRNSRAGTISKATKEADLIAKWDASSWAKKRARK IKRASMNDFDRFQVMVARKQKSAIIAKKVSELQAAA* back to topmRNA from alignment at D-herbacea_F_contig111:391665..397464+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig111.944.1 ID=mRNA_D-herbacea_F_contig111.944.1|Name=mRNA_D-herbacea_F_contig111.944.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=5800bp|location=Sequence derived from alignment at D-herbacea_F_contig111:391665..397464+ (Desmarestia herbacea DmunF female) GGGTTCACTCGGTTCGTGGAGATCGGGCGTGTGGTGCTCGTCAACTACGG
CCCGCACGAGGGCAAGCTTGCTGTCATCATCGATGTTGTCGACAACAACA
AGGTGTGTGTGTGTACTCTTTTGGGGCGGTTGCGGTGCCTGGCGGTGATG
TACGGCTTGTTGGCAATTTTGCGGCGCTTTTTGCATTGGTACAAATCAAT
GAGAGTCGACGAAGGAAGAAAGCGCTGCACACCCTTATGGCGATAAAAAT
GTAGGCACGTACCGTAGTGGGGAGGATAGCCTGCTATGTGACCCCGGATC
TGAGTTACGAAGAGAGATGGAGCTAGAGAAAGAATAAGGCAAACATCATT
AATGGCACGAGAAATGTGTGTCTAGTATTTGAGTCCTCTGGAATGTGATG
TTTTACCCAAGTTTGGTCGTTTCTGAAGGACTGACGCAACCCTCATCCCT
CACTTCACTCTCCTGACACACGATAACAATACTCGTACTGATAAATAAAT
AGGTAGGGCGGTGAGCTGATTGGTCCAACCTTTCACAGCCGAAAATGGCG
GAGTTTCACACAAATGATTGACTTTGCGAAGCCTATGTACGCCCCTAGCC
CCCCTCCTGGAGACAGAAAAATATGTCGTTTCTGCGCCTGTTGATCTACG
TCAGCGTTCATATGTACTACTGTCAAAGTAGTTTGCTCGCGCACAACATG
CGGTTCCATTTGTGACGTTGGTGCTATTAATGCCTTGCTATATCGAATGC
CAACAGCGAATATCAAGGTGATGCAAGACACCAATCGGACACCAGCTGTA
GAACATGGCAACTACTGTACTGTAGAATAAACTAAACATTAAAGTCGAAC
GGGTAGGGTTTTGTGGAGATACGTTCAGGGGTTTGTGGTGCGGGGAAGGC
AGATAGGTCGCAACAGCAATGCCTACTGTAATTGTAAAACTAGTTGCTTG
CCAGATCGGTTGTATTGGTTGCTACCCAGTTGACAGCCCTGCAAGTATTC
CATCCTAGTGAGGCGCTAACTAGTTACATGCAAGCAAGGCTTTCCACGGT
GTACATAGAACCGAACCGCGGTGCGGTTTTTCTATTTGCAAAATCCTGTT
ACGGTGCGGTGCGCATTATAAGAATTGGGAATTGTACCGGTGCGTTTCGG
TAAAAACCGCACCGCACCGTAGCAAACTACTTGGTTTCAAAGTTTCTATG
GCTTCTTCATTGTTATTGCAGTGAGAATTTAACGGTGCAGTTCAGTGCGG
ATTTTTATTTTATAGAATCGTACGGTGCTGTGCGGTTTTGCCCGGAGGGG
AAAATCATACGGTGCGCCTAACAAAAAACCACACACCGTAAAAAGCCTTG
GTGACTCAACGCAAGACAGTTATTTTCGGTGATCTTTTGCGCTTGCTCGA
AGCATGGTATTGTCAAGCCTCAAGGAAGTAATTTTTCGCATGTATACATG
CCTAGTAGCGTTTCGTCAGCTCGTTTTGTTGTTTGATGCACTGGCTAGAA
TGCTGGTATCCGGTGCAAGTGGTAATTGGCTCTGAAAATCTAGCTGTGGA
CACAAGTAGTACGAAATGGGCGACACTTTTTTACGAGTATGTCAATGAAC
TTACATACTTCGTAGTACACGAAAAAAATCAAAATTCGCGTGGAAGTTTG
ACTGGAATTTTCGGGGCGACCATCAGGTCGCAACGCCCATTGTTTTTCTG
AGTAAACCGGCCACACTGGGTGCCCGCGTAACCCTTTACATAGTGCACCC
CGCAAGAAAGTCCGGCGCCGTGTACCCAGGCGTGTCACAGCGTGAGTACG
TGCTGTGCTCTCCGGCATATATCATTATTGTGATTTTATTTTACCCTTGT
GCGAATATTGATGGTTACATAGTGCACCCCGCAAGAAAGTCCGGCGCCGT
GTACCCAGGCGTGTCACAGCGTGAGTACGTGCTGTGCTCTCCGGCATATA
TCATTATTGTGATTTTATTTTACCCTTGTGCGAATATTGATCGTTGAAAA
CAACATCACAGGTGATTTTTTGCCGTGTCCAGCAAAAGTTTGCTAATCGT
TTAGAAGGAGGCACAAAAATGCATTTGGAGCGATACACTGAAGCTATTGT
CAATGAGCTATGCGAATGCTGTACCCTGTGCATGATGAAACCGAGGCATG
TACCGGGGGGGGGGAGTGCGGGAATCGTAGACACCTGGCGATCACGGCTT
GCTCTGGCACCGCGCTGAGCGATGGGTTCCTGTGAGCTGGACTTATCGAA
ACCAAGGCATATACCGGGGGTGGGTGGGTGGGTGGGAAGGGAAACACTGT
GACCACAGCTTTCTCGGGCAGCCGCGCTGAACCATGACCTTCTGTCAGCC
GGACTGGGAAGTCAAAGTGGTTAATACAATAAAATGGCAGTTTGGATTGT
GATTTTTCAGAGATTCTGGTTGGTTTCGGTCGTAGAGTGTGAATACACTT
TTCTGGCAAGGAGCCCCTCTCTCTTTTTGGCGCCGTCAAAAATTAGCAAC
TCGCTTCGCTCGTAACAAAACGATGGTTGTACTCTTGTGGCGTTTTTTGA
CTGTCGTAACGTGCTCGCGTTGCATGGGTAATTGTTTTAGGCGCTCGTTG
ATGGACCCGACACCGGCGTGCCCCGTCAAATGATCCCCTTCAAGCGACTC
TCCCTCACGGACTTCAAGCTCCCCATCCAGCGCAACTCGCGCGCCGGTAC
CATCAGCAAGGCGACCAAGGTGAGTGAATTTTTTTTTTCCGACTGGATAT
TTAGAATTTTCGTTGTATATGCCCTAGTAGCACCAGCGTGGGCTGTTGAG
AACTTTGTAACAATTTCTAGAACTACGAGTGACCCTAACATAGGGGCCAC
AATATAATGATACGGAGCAAAACGCCAGTAAATATACTGTCAGACAGGTG
TGCTAAAAATTAGTATCAACTCGAAATGCTGCTTCTTTTGTTGTACCGGG
TTTTGATCGTATCGTATCACAACTCGTAGTGTCTTGCTCGTGGTTTGTGG
TTGCAGTTCAGGAGTAACAGTTAGCGGGATGTGTGTTCGCGAAGTTATGT
GGGAATGCCACCTAGCTCCGCACAGGGTGTAACATAGGACGACCAGAGAT
TGCCTAGTTTGTTTTTTTTCGTGCTTCGTAGTGTGACTGTTAAGTTTTCT
GACGTCTGTTGGTGGTGTCGGGACCCTGGTCATACTTAATGCAAAAACGA
GCATTGCGGTAGTTCAATACCCTCTCGGGGCATTCTGATGACGATTGCCG
TGTTACTTATCTCAAATTTCCACATGTTGCTTTGCGGGGGTGGTTGCTTA
GTATGCAGGCATGGATTCCGCATTTGTTTGTTGCTCCTTGATTGGTGTTT
TTATTTATTTTCGTCCCCTTTATCATCGTTCCTCTATTCTTTCTCTAGCT
CCATAGCTCTTCGTAACTCAGATCCGGGGTTGCATAGTAGGCGTTCCTCC
CGCGTTCCCACTACGGTACGTGCCTAATTTTTATCGCGAAAAGAGTGCAG
CACTTTCTTTCCTTGTTGACTTCCATCGAATCGTGAGTCACGCTCTCCCA
TTTTCAGTGAAGGAATTTGGCACAGAAAAGTGCCACGGTGAATCGAACCC
GAACTTCCGCCAACAGAGGCGAACACCCTAACCATCAGACCAATGCGCCA
CCCCTGTCTGATATGTTGCTGATCTACTTAAACAAAATTATTTTTCAACA
CAGCAGTCAACGGTAGTGTGTGGTTAATATTTTTGTGTTTGGTTTCTATG
ATAATTGTGTGAGCAGGAGGCTGACTTGATCGCTAAGTGGGACGCGTCTT
CGTGGGCGAAAAAGAGGGCGAGGAAGATCAAGCGCGCGAGCATGAACGAC
TTCGACCGTTTCCAGGTAGGTAGAGGTTGTTTTAGCCACGCGAAGCGTTT
TTGTTTGTGGTTGGTATGGACCTAAACGAGGAAACCATAAGAGTAGCTCT
GTAGGATGTAGTTCGTCGACATACACGCGTGTCTGCCGCAACGGTGCTAC
GGTAGTATTTAATGCTGGCCGGAGGTTATTAGGTGTGTTACATCTCGTCC
GTCGTGAGGATACTGTCTGTTCTTAAGCACTGCGGAAGTTCTCCTCGCGC
TTGTGTTGGCATTCCCATGAGTGTGAAATAAGAGAACCTTAAAAACAAAA
TAGAGGAACCTTCGAAAAAGCTGAACCGTGGAAATTGTGTGGAGCTGAAT
CTTTATTTCTACCCATCCGGCGCAGGATAACAATGGTTGAAAAAAAATGG
CCCTGGGAAATGGATGGTGTCTGGACAGTAATATAAATTATGGTACAATC
GCAGCTGCTTATGGCGCGTCGTATATAGAGTATTTTATTAATAGAATACT
GGCGAATTGCGGCAAAAGGGACAAGGAGGCACACGGCTGTGTTTTTTTTT
TCCAGTGCTTTAGTACGTGCTCCGTCGTCGTGAGAGGTGGCTGTCGCTTT
GTACGAATACACTTGGTGTGAGCCCAATAGTGATGTACAACGATGCGATA
AGTTGCTTGTCCCTACTGTACTCGGTAGGGATTAGGAATCAATCACACCT
CCATTCCCTTCGGACCGATTATTTTTGTAGTGGTCTACCACGGTACCGTC
TAGTTAAGGCCGCGTCGACCAAGGTACTACGTAGACAAGTACGATGGGCT
GCGTTCGTCTCTGTGATACTCCTTTGTTTGTTTTGCGCATTTTCCACCAG
ATGGTTTGGTGGTGCATGCGGGCTGACAATGTTTACGATAATCCAAGAGG
GTGTAATTTGTTTTTAGTGTGTTGAGTTGTGTTGCTGAGTGTCATGGATT
GTAAATTGAACTTGTTTCTTGCATTTGCTCGTGACGCTCTCTACTGTGTG
AACAATTTGCTCTGTTCGTGTTTGGTTTCTTTCTTGCTCGTCGGTTGGGT
TGTGTGTACAGGTTATGGTCGCTCGCAAGCAAAAGAGCGCCATCATCGCC
AAGAAGGTGTCGGAGCTCCAAGCGGCGGCTTAGACGTTCTGTGATTACTT
ACGGTTGCCCACGCCATGGGGTGGTGGGGGAGGGGAGATGGAATGGGATG
GGGGGAGCTTTATTGCAGCCAGTGCGGAAGCAGATCGTTGTGCAAGAGAG
TTTGATCGATTGAGTTTGTTGAAACTGTCGTGTGGACTTGTTTTTTGTTG
CCGTCGTATTTCTGGTTTGCCTGGCTCGTGAGTTGCTTCCTGCTGTTACG
GTAGTTTGACGGTGACAGCAGCATCTTTCTCCTCGTGTTGGAGTTATCTA
CGTATACCTGCGTCGTCGCTGATATCCCGACGTTTCTTTGCCCTGCCACG
GTTAATTAAAAAAAATGAAAACTGATCCAATTGTGGGCGATGTTCACTGG
GTATGGTTTGTTTGGTATTCTCACCAGTGGTGAAATTTGTGGCCGCGCTG
CGGTTGTTCGCCGCTGCATCCGAAGTCTGCGCACCATACCCGTGGCGGTT
CTTGGTCATGCACACTGAGTTTTACATATATATGGAATTGCGTACATACA
TGTGAACACGGTGCAGCGGGACCTTCCTGCTGAACCCCCGACGCGTATAA
ATATTTAGGTCGATGCTTGACGCAGCACGTGCATGCTTACATCTCACGTC
AAGAACCTTCTAGTTGTGCCTGTGCGGCAAGTACTTTTTGGCATGGTGTA
CAATATAGGCTTATGTGTTCGTTTTGTCCCGAGCGAGGTATGCGACTGAA
GCTGAGCTGCCAGTCTTGATCGTACGTAAGGACTTGTGTTGAGGGATTTG
CACTTTGCACCCATTCATTTCTATGGCACATTAGTTGACAACAAAATCGC
back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig111:391665..397464+ >mRNA_D-herbacea_F_contig111.944.1 ID=mRNA_D-herbacea_F_contig111.944.1|Name=mRNA_D-herbacea_F_contig111.944.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=522bp|location=Sequence derived from alignment at D-herbacea_F_contig111:391665..397464+ (Desmarestia herbacea DmunF female) ATGATCCCCTTCAAGCGACTCTCCCTCACGGACTTCAAGCTCCCCATCCA GCGCAACTCGCGCGCCGGTACCATCAGCAAGGCGACCAAGATGATCCCCT TCAAGCGACTCTCCCTCACGGACTTCAAGCTCCCCATCCAGCGCAACTCG CGCGCCGGTACCATCAGCAAGGCGACCAAGGAGGCTGACTTGATCGCTAA GTGGGACGCGTCTTCGTGGGCGAAAAAGAGGGCGAGGAAGATCAAGCGCG CGAGCATGAACGACTTCGACCGTTTCCAGGAGGCTGACTTGATCGCTAAG TGGGACGCGTCTTCGTGGGCGAAAAAGAGGGCGAGGAAGATCAAGCGCGC GAGCATGAACGACTTCGACCGTTTCCAGGTTATGGTCGCTCGCAAGCAAA AGAGCGCCATCATCGCCAAGAAGGTGTCGGAGCTCCAAGCGGCGGCTTAG GTTATGGTCGCTCGCAAGCAAAAGAGCGCCATCATCGCCAAGAAGGTGTC GGAGCTCCAAGCGGCGGCTTAG back to top
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