prot_D-herbacea_F_contig110.910.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig110.910.1
Unique Nameprot_D-herbacea_F_contig110.910.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length294
Homology
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: D8LTY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY0_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 4.480e-79
Identity = 145/223 (65.02%), Postives = 160/223 (71.75%), Query Frame = 0
Query:   78 APSQSSARMSRALLVSGGAGSAXXXXTAGGVSSG-PSGFGLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLD-------SRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEEAK 292
            AP  +   M +AL V+GG   A      G    G P+GFG+ SAWGV+SVVFILMNAVKRLAPIA+QPFSR                         GFQKKFSPLVVKRALTLD       +  GG      AGPLRL+LAGPYSMGLFHATKKR+TVSW+LTAGVLCLVQ+VKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARA++GKAP+IDPALPEE K
Sbjct:  117 APKNTLPLMGKALFVTGGGAGA------GAAGKGEPAGFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRASL----------------------GFQKKFSPLVVKRALTLDQAAAAVPAADGGQKRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEKK 311          
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A836CIU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU2_9STRA)

HSP 1 Score: 224 bits (570), Expect = 6.060e-69
Identity = 122/214 (57.01%), Postives = 150/214 (70.09%), Query Frame = 0
Query:   77 GAPSQSSARMSRALLVSGGAGSAXXXXTAGGVSSGPSGFGLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEE 290
            G  ++  +R++ AL +SGGA +      +   +SG S FGL SAWGVLSV+ IL NAVKRLAPIA+QPF  GD     W MY  FA LMAYAEG+K FQKKFSP+VV+RALTLD          +AGPLRL+LAGPYSMGLFHA++KR+ VSW L+  VL LVQ V++LPYPWRSI+D GVV GLS+G+ +I   W R+  G  P +D  LP E
Sbjct:   61 GCSAERRSRLATALRMSGGAAADDNTVAS---TSGRSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDK---------SAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLE 262          
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A6H5KSH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH0_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 8.720e-67
Identity = 109/141 (77.30%), Postives = 121/141 (85.82%), Query Frame = 0
Query:  157 MYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGA-------AGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEE 290
            MY  F+A+MAYAEGFKGFQ+KFSPLVVKRALTLD                  AGPLRL+LAGPYSMGLFHATKKR+TVSW+LTAGVLCLVQ+VKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARA++G+AP+IDPALPE+
Sbjct:    1 MYAGFSAIMAYAEGFKGFQQKFSPLVVKRALTLDPAAXXXXXXXXXXXXXXRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAVLGRAPSIDPALPEK 141          
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A835ZF77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF77_9STRA)

HSP 1 Score: 209 bits (532), Expect = 9.300e-64
Identity = 105/177 (59.32%), Postives = 128/177 (72.32%), Query Frame = 0
Query:  113 SGFGLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPE 289
            S FG  SAWGVLSV+ IL  A++RL PIALQPF  GD +   WA+Y  F ALMAY EG K FQKKFSP+VV+RALTLD       A  + GPLR+ILAGPY MGLF+AT+KR+ VSW L   V+ LV +V++LPYPWRSI+DAGVV GLS+G  +I   W R+  G+AP +D  +PE
Sbjct:   45 SSFGFASAWGVLSVLSILAGALRRLVPIALQPFKAGDLSYGHWALYMSFVALMAYVEGHKAFQKKFSPMVVQRALTLDQ------ARTSFGPLRIILAGPYCMGLFYATRKRKIVSWTLYISVIALVTVVRQLPYPWRSIIDAGVVAGLSWGASAILYFWVRSWFGRAPGVDAQMPE 215          
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A7S3SW48_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SW48_EMIHU)

HSP 1 Score: 190 bits (483), Expect = 3.440e-56
Identity = 99/177 (55.93%), Postives = 124/177 (70.06%), Query Frame = 0
Query:  116 GLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEEAK 292
            GL +AWGV   + IL  A+ RLAPIA+QP  + D   +QW +YG   A  AY EG+K FQ KFSPLVV+RA+TL +R      S     L  +LA  YSMGLFHA+KKR+TVSW+++ GV C++ LVKRLPYPWRS+VDAGV  GL +G  SI VI+ RAL GK+P +DP LP+E K
Sbjct:   72 GLRTAWGVCGFLGILAQAIGRLAPIAMQPILQRDITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLSTR------SPPPPLLHSVLAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPKEDK 242          
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: W7TVP9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP9_9STRA)

HSP 1 Score: 191 bits (484), Expect = 9.760e-56
Identity = 105/184 (57.07%), Postives = 128/184 (69.57%), Query Frame = 0
Query:  115 FGLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGD----FNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPL-RLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEEAKA 293
            F L + WGV+ VV +L NA++RL PIAL+PF +      F  + WA Y  FA +MAYAEG+KGFQ KFSPLVVKRALTL  R           PL   +LA PYSMGLFHA+KKR+ VSW +  GV+ LV+ VK L +P+RSIVDAGVV GLS+G LSI  I+A+AL G  P+IDPALP+  KA
Sbjct:  116 FSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRS----------PLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVKKA 289          
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A0M0JX49_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX49_9EUKA)

HSP 1 Score: 182 bits (463), Expect = 1.840e-53
Identity = 92/173 (53.18%), Postives = 119/173 (68.79%), Query Frame = 0
Query:  116 GLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALP 288
            G+  AWGV   + IL +A+KRLAPIA+QPF + D + +QW  YG    + AY EG+  FQKKFSPLVV+RA+TL           +  P+ + LA  YSMGL HATKKR+ VSW+++  V  +V +VKRLPYPWRSIVDAGV  GL++G +SI +I+ARAL G  P +DP LP
Sbjct:   55 GIAVAWGVCGFLGILASAIKRLAPIAMQPFLQRDLSWLQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTLKQ---------STSPVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLP 218          
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A7R9U4X8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4X8_9STRA)

HSP 1 Score: 183 bits (465), Expect = 4.210e-53
Identity = 99/200 (49.50%), Postives = 125/200 (62.50%), Query Frame = 0
Query:   94 GGAGSAXXXXTAGGVSSGPSGFGLG---SAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEE 290
            GG G A     AGG SS  S  G G   + WGVL V ++L+N ++RL PIA++PF RGDF    WA Y  FA  MAYAEG KGFQKKF P VV+RA  L          G+  PL  I A  + MGLFHA+KKR+ +SW+L  GV  ++Q+ KRL YPW +IVDAG VVGL +G +S+   + R+L G+ P+I   LP E
Sbjct:   79 GGTGPAKATVAAGGASSEASAVGYGGVAATWGVLGVFYVLLNGLRRLVPIAVEPFQRGDFGLGLWAAYAGFAVFMAYAEGVKGFQKKFCPFVVRRAQLLK---------GSTNPLHCIFAPFFCMGLFHASKKRKILSWSLLIGVFGIIQVAKRLAYPWNAIVDAGAVVGLGWGCISLGATYVRSLFGQVPSISAELPSE 269          
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A8J6CDI7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDI7_DIALT)

HSP 1 Score: 171 bits (432), Expect = 7.580e-49
Identity = 90/170 (52.94%), Postives = 112/170 (65.88%), Query Frame = 0
Query:  119 SAWGVLSVVFILMNAVKRLAPIALQPFSRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALP 288
            S WGV+ V+ IL NA+ RLAPIA +PF  G    + WA Y    A  AY EG+K FQ KFSPLVV RA TL  + G A A      LR +LA  YSMGLFHAT+KR+ +SW ++  V+ +V +VKRLPYPWRSIVDAGVV GL++G  SI  I+ +A+ G  P +   LP
Sbjct:   53 SHWGVVGVMAILANAIGRLAPIAAEPFRYGGLAPLHWASYAATIAAFAYVEGYKAFQLKFSPLVVSRAFTLGPQGGRATA------LRSVLAPFYSMGLFHATRKRKVISWTISLAVIVIVGVVKRLPYPWRSIVDAGVVAGLTWGVTSIGWIYVKAIGGSLPNVSTELP 216          
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Match: A0A7S2WJT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJT5_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.610e-48
Identity = 92/179 (51.40%), Postives = 115/179 (64.25%), Query Frame = 0
Query:  112 PSGFGLGSAWGVLSVVFILMNAVKRLAPIALQPF-SRGDFNAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASGAAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARALM-GKAPAIDPALP 288
            P GF + S WG L V++IL N +KRL P+ALQPF S GD +A+ W  Y ++   M Y EG+K FQ KF PLVV RA TL+ +       G    LR  LA  YSMGLFHA+KKR  VSW+   G+  +V  VKRLPYPWRSI+D GVV GLS+G  SI  ++ R +  G+ P +DP LP
Sbjct:  121 PLGF-IASTWGALGVMYILANPIKRLLPVALQPFASPGDLSAMHWVAYALWCVFMGYTEGYKAFQLKFCPLVVSRAATLERQD----CRGPGWWLRAALAPLYSMGLFHASKKRLIVSWSFVIGISAIVATVKRLPYPWRSIIDGGVVFGLSWGAASIAYLYLRKIFTGQIPEVDPQLP 294          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig110.910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY0_ECTSI4.480e-7965.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CIU2_9STRA6.060e-6957.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KSH0_9PHAE8.720e-6777.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZF77_9STRA9.300e-6459.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3SW48_EMIHU3.440e-5655.93Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
W7TVP9_9STRA9.760e-5657.07Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A0M0JX49_9EUKA1.840e-5353.18Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7R9U4X8_9STRA4.210e-5349.50Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A8J6CDI7_DIALT7.580e-4952.94Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S2WJT5_9STRA1.610e-4851.40Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 274..293
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..273
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 175..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 135..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 244..254
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.597
NoneNo IPR availableTMHMMTMhelixcoord: 89..108
NoneNo IPR availableTMHMMTMhelixcoord: 225..242
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
NoneNo IPR availableTMHMMTMhelixcoord: 252..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig110contigD-herbacea_F_contig110:586624..590195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig110.910.1mRNA_D-herbacea_F_contig110.910.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig110 586076..590319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig110.910.1 ID=prot_D-herbacea_F_contig110.910.1|Name=mRNA_D-herbacea_F_contig110.910.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=294bp
MRVIGVVVLAMSGVLSASGSSGSRSLAFVGAATPASPQAFRASGGRHFGR
ATCSPRPVIAMTLSPREQDQLSATLNGAPSQSSARMSRALLVSGGAGSAA
AAATAGGVSSGPSGFGLGSAWGVLSVVFILMNAVKRLAPIALQPFSRGDF
NAVQWAMYGVFAALMAYAEGFKGFQKKFSPLVVKRALTLDSRKGGAGASG
AAGPLRLILAGPYSMGLFHATKKRRTVSWALTAGVLCLVQLVKRLPYPWR
SIVDAGVVVGLSYGTLSICVIWARALMGKAPAIDPALPEEAKA*
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